Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0010722

Physical Location & Seq

Genomic Coordinates Forward (+)

38099971 .. 38104547

Gene Structure 4577 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1249400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2247 bp

ATGATCGCCTGCAAAGCTTCAAACCCTAACCATGGAGCTCTCTCCCCACTCCACCCTGCCAAAAGACCCCTCAAACACGCCCCAATATACAGAATATGCCACACTCCCCACACCACCACCACCACCAACACGAACAACAATTTGTGCGTGGTATTTTCGTCCTTAGCAGATGGACCCAGATGGAATCAGTACCACCAATTCACGAACGGCGGCAGCAAGAATGGCAGCAGCACCGTTTACAAGAAACCCAGAAACGCGGAAGAGGCGGAGGAGGAAGGAGGAGGAGGAGGAGAGAGGAAGGTGCAGTGCGAAGTGGAGTTGATTTCGTGGAGGGAGCGCCGAATCAAGGCCGATATTTTGGTCAATGCCGATATCGATTCGGTCTGGAACGCTCTCACTGATTACGAATGTCTGGCTGACTTCATCCCCAATCTTGTTTCCAGCCGGAGACTACCATGTCCGCATCTGGGGCGTATTTGGTTGGAGCAGAGAGGCTTGCAGAGGGCGCTGTATTGGCATATCGAAGCTCGGGTTGTTTTGGACCTTCAAGAATTTCCTAACTTAAGTCATAATAATCGTGAGCTCCACTTTTCCATGGTTGATGGAGACTTCAAAAAGTTCGAAGGCAAATGGGCCGTTAGATGCGGGACAAGGTCATCATCAACAATTTTATCATATGAACTTAATGTAATACCAAGATTCAACTTTCCTGCCATTTTCTTGGAAAGAATTATCAGATCAGATCTTCCGGTGAATCTTCGGGCCTTGGCTTGCAGATCAGAAAAGAATTTTGTAGGGGATCAGAAGATAACAATGACAGAAAGTTCCTTGCCTACCACATCCCTGGCTGCTACTTGTTCACTCCCCAAAAACATCGACGGTTCTTTGAGTGAAAAGGATTACCCACTTAATGAGTTTAAAGAGAATATTCCTGGCTCTAATCCTGGTCCATTGACCCCATCTTCAACCGAGTTGAACAGTAACTGGGGTGTTTTTGGGAAAGTGTGCAGACTTGCTAAGCCTTTCTTGGTGGATGAGGTTCATCTTCGGAGATTCGATGGTCTATTGGAAAATGGAGGCGTTCATCGCTGTGTTGTTGCTAGCGTAACAGTTAAAGCTCCTGTTCGTGAAGTATGGAATGTTTTGACTGCTTATGAAAGTCTTCCTGAGATCGTCCCAAACTTGGCAATCAGTAGGATATTATCAAGGGAAAACAACAAAGTCCGCATTCTGCAGGAAGGATGCAAGGGGTTACTTTATATGGTACTTCACGCACGTGTTGTCCTAGACCTGTGTGAGCAGCTTGAAGAGGAGATAAGTTTTGAACAGGTTGAAGGGGACTTTGACTCGTTTCGAGGTAAATGGGTTCTTGAGCAGCTAGGAAGTCATCACACGCTGTTAAAGTACTCTGTGGAATCAAAAATGCGCAAAGACACTTTGCTTTCCGAAGCTATTATGGAAGAGGTTATATATGAAGATCTCCCTTCAAATTTATGCACCATACGGGATTACGTAGAGAAAAGGGAGGCGGCACACTCGTCAAAAGCATCTGATGAAAACATATATACGGAGGAAGAAACCGCTTCATGTAGCTCTGGCCATGATGATGAAAGAAGTAATACAACAGTTGACCGGATTTCCGATACCGATGCTCGAAGTTCATCTAGGAAAAGGCCGAGAGTACCAGGCTTGCAAAGGGATATTGAAGTTTTGAAAAGTGAGCTCCTGAAATTTATTTCAGAGCATGGGCAGGAAGGATTTATGCCCATGAGAAAGCAACTTCGTGTACATGGAAGAGTAGATATTGAGAAAGCAATTAGACGCATGGGCGGATTTAGAAGGATCGCATCATTGATGAACCTCTCTCTTGCTTACAAAAACCGAAAACCAAAGGGCTACTGGGACAGCCTTGACAATATGCAGGAAGAGATCAACCGGTTTCAGAGGAGTTGGGGAATGGACCCTTCATTCATGCCGAGTAGAAAGTCATTTGAGCGCGCAGGGCGCTACGACATTGCTCGTGCATTGGAGAAGTGGGGCGGGCTTCATGAGGTTTCCCGTCTTCTGTCGCTGAAGGTGAGGCACCCTAATCGACAGCCGAACCTGGGGAGGGATGTAAAACTAGACTATGTGGTGTCAACCGATGTAGAGGAGGAGAAAGTGGTAGCATCTAATCCCTATGTATCTCAAGATACACAAAAGTGGATCTCTGAATTAAAACATTTGGATATTAATTGGGTCGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Polyketide_cyc

Protein Analysis

749

Amino Acids

85.24

Weight (kDa)

7.31

Isoelectric Point (pI)

47.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Polyketide_cyc	PF03364	121 - 256	1.6e-17	Polyketide cyclase / dehydrase and lipid transport
Polyketide_cyc	PF03364	371 - 498	7.8e-19	Polyketide cyclase / dehydrase and lipid transport

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010722)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08720
fragaria_vesca	FvH4_3g12600 FvH4_3g12600 FvH4_3g12600 FvH4_3g12600
malus_domestica	MD05G1249400.v1.1
prunus_persica	Prupe.4G114800_v2.0.a1 Prupe.4G114800_v2.0.a1
pyrus_communis	pycom05g22650
rosa_chinensis	RchiOBHm_Chr5g0020561
rosa_multiflora	Rmu_sc0018120.1_g000002
rosa_roxburghii	Rroxscaffold_1G00057730
rosa_rugosa	Rorug05G0060700 Rorug05G0060800 Rorug05G0060900
rosa_samantha	Rh5AG151200 Rh5BG150600 Rh5CG162100 Rh5DG150000
rosa_wichuraiana	Rw5G013380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	456
Acc16I	TGCGCA	1 cut(s)	1427
AccB1I	GGYRCC	1 cut(s)	2082
AccII	CGCG	2 cut(s)	257, 1998
AclWI	GGATC	3 cut(s)	807, 1850, 2213
AcoI	YGGCCR	1 cut(s)	1597
AcsI	RAATTY	4 cut(s)	551, 787, 1489, 1730
AcuI	CTGAAG	1 cut(s)	2093
AcvI	CACGTG	1 cut(s)	1277
AfaI	GTAC	5 cut(s)	191, 1266, 1406, 1683, 1788
AfiI	CCNNNNNNNGG	6 cut(s)	32, 346, 467, 1183, 2105, 2110
AflII	CTTAAG	1 cut(s)	562
AflIII	ACRYGT	1 cut(s)	1276
AgeI	ACCGGT	1 cut(s)	1935
AjnI	CCWGG	5 cut(s)	843, 931, 943, 1684, 2103
AleI	CACNNNNGTG	2 cut(s)	1275, 2200
Alw21I	GWGCWC	3 cut(s)	40, 585, 1725
Alw26I	GTCTC	2 cut(s)	442, 600
AlwI	GGATC	3 cut(s)	807, 1850, 2213
AlwNI	CAGNNNCTG	1 cut(s)	984
Ama87I	CYCGRG	1 cut(s)	528
AoxI	GGCC	5 cut(s)	348, 633, 762, 1597, 1673
ApeKI	GCWGC	6 cut(s)	213, 225, 228, 848, 1300, 1375
ApoI	RAATTY	4 cut(s)	551, 787, 1489, 1730
AseI	ATTAAT	1 cut(s)	2232
AsiGI	ACCGGT	1 cut(s)	1935
Asp700I	GAANNNNTTC	1 cut(s)	1161
AspLEI	GCGC	6 cut(s)	339, 508, 1428, 1998, 2000, 2007
AspS9I	GGNCC	6 cut(s)	173, 541, 633, 762, 947, 1960
AsuHPI	GGTGA	2 cut(s)	763, 2089
AsuII	TTCGAA	1 cut(s)	621
AsuNHI	GCTAGC	1 cut(s)	1100
AvaI	CYCGRG	1 cut(s)	528
AvaII	GGWCC	4 cut(s)	173, 541, 947, 1960
BalI	TGGCCA	1 cut(s)	1599
BanI	GGYRCC	1 cut(s)	2082
BanII	GRGCYC	3 cut(s)	40, 585, 1725
BauI	CACGAG	1 cut(s)	2019
BbrPI	CACGTG	1 cut(s)	1277
BbsI	GAAGAC	2 cut(s)	1154, 2054
Bbv12I	GWGCWC	3 cut(s)	40, 585, 1725
BbvI	GCAGC	6 cut(s)	225, 237, 240, 835, 1312, 1387
BccI	CCATC	5 cut(s)	164, 174, 596, 967, 1052
BceAI	ACGGC	2 cut(s)	223, 620
BcgI	CGANNNNNNTGC	4 cut(s)	1631, 1665, 2072, 2106
BciT130I	CCWGG	5 cut(s)	845, 933, 945, 1686, 2105
BcoDI	GTCTC	2 cut(s)	442, 600
BfaI	CTAG	5 cut(s)	1101, 1286, 1379, 1665, 2123
BfmI	CTRYAG	1 cut(s)	1232
BfoI	RGCGCY	3 cut(s)	340, 509, 2008
BfrI	CTTAAG	1 cut(s)	562
BglII	AGATCT	2 cut(s)	742, 1477
BisI	GCNGC	8 cut(s)	211, 214, 226, 229, 849, 1301, 1376, 1530
BlpI	GCTNAGC	1 cut(s)	1017
BlsI	GCNGC	8 cut(s)	212, 215, 227, 230, 850, 1302, 1377, 1531
BmcAI	AGTACT	1 cut(s)	1406
Bme1390I	CCNGG	5 cut(s)	845, 933, 945, 1686, 2105
Bme18I	GGWCC	4 cut(s)	173, 541, 947, 1960
BmeT110I	CYCGRG	1 cut(s)	528
BmgT120I	GGNCC	6 cut(s)	173, 541, 633, 762, 947, 1960
BmiI	GGNNCC	3 cut(s)	175, 1962, 2084
BmrFI	CCNGG	5 cut(s)	845, 933, 945, 1686, 2105
BmrI	ACTGGG	2 cut(s)	994, 1909
BmsI	GCATC	7 cut(s)	472, 632, 1232, 1556, 1639, 1856, 2177
BmtI	GCTAGC	1 cut(s)	1104
BmuI	ACTGGG	2 cut(s)	994, 1909
BpiI	GAAGAC	2 cut(s)	1154, 2054
Bpu10I	CCTNAGC	1 cut(s)	163
Bpu1102I	GCTNAGC	1 cut(s)	1017
Bpu14I	TTCGAA	1 cut(s)	621
BpuEI	CTTGAG	2 cut(s)	1391, 2172
Bsa29I	ATCGAT	1 cut(s)	375
BsaAI	YACGTR	2 cut(s)	1277, 1513
BsaJI	CCNNGG	5 cut(s)	31, 594, 765, 843, 2104
BsaWI	WCCGGW	3 cut(s)	748, 1632, 1935
Bsc4I	CCNNNNNNNGG	6 cut(s)	32, 346, 467, 1183, 2105, 2110
Bse118I	RCCGGY	1 cut(s)	1935
Bse1I	ACTGG	2 cut(s)	989, 1904
Bse3DI	GCAATG	1 cut(s)	2013
BseBI	CCWGG	5 cut(s)	845, 933, 945, 1686, 2105
BseCI	ATCGAT	1 cut(s)	375
BseDI	CCNNGG	5 cut(s)	31, 594, 765, 843, 2104
BseGI	GGATG	5 cut(s)	423, 839, 1039, 1247, 2119
BseLI	CCNNNNNNNGG	6 cut(s)	32, 346, 467, 1183, 2105, 2110
BseMI	GCAATG	1 cut(s)	2013
BseMII	CTCAG	1 cut(s)	1158
BseNI	ACTGG	2 cut(s)	989, 1904
BsePI	GCGCGC	1 cut(s)	1996
BseRI	GAGGAG	9 cut(s)	284, 294, 297, 300, 303, 1325, 1960, 2165, 2168
BseXI	GCAGC	6 cut(s)	225, 237, 240, 835, 1312, 1387
BsgI	GTGCAG	2 cut(s)	323, 1027
Bsh1236I	CGCG	2 cut(s)	257, 1998
BshFI	GGCC	5 cut(s)	350, 635, 764, 1599, 1675
BshNI	GGYRCC	1 cut(s)	2082
BshTI	ACCGGT	1 cut(s)	1935
BshVI	ATCGAT	1 cut(s)	375
BsiHKAI	GWGCWC	3 cut(s)	40, 585, 1725
BsiHKCI	CYCGRG	1 cut(s)	528
BsiSI	CCGG	4 cut(s)	445, 749, 1633, 1936
BslFI	GGGAC	4 cut(s)	661, 1160, 1352, 1916
BslI	CCNNNNNNNGG	6 cut(s)	32, 346, 467, 1183, 2105, 2110
BsmAI	GTCTC	2 cut(s)	442, 600
BsmFI	GGGAC	4 cut(s)	661, 1160, 1352, 1916
BsmI	GAATGC	1 cut(s)	1227
BsnI	GGCC	5 cut(s)	350, 635, 764, 1599, 1675
BsoBI	CYCGRG	1 cut(s)	528
Bsp119I	TTCGAA	1 cut(s)	621
Bsp1286I	GDGCHC	3 cut(s)	40, 585, 1725
Bsp1407I	TGTACA	1 cut(s)	1786
Bsp1720I	GCTNAGC	1 cut(s)	1017
Bsp19I	CCATGG	2 cut(s)	31, 594
BspANI	GGCC	5 cut(s)	350, 635, 764, 1599, 1675
BspCNI	CTCAG	1 cut(s)	1159
BspDI	ATCGAT	1 cut(s)	375
BspFNI	CGCG	2 cut(s)	257, 1998
BspHI	TCATGA	1 cut(s)	2047
BspLI	GGNNCC	3 cut(s)	175, 1962, 2084
BspMAI	CTGCAG	1 cut(s)	1236
BspOI	GCTAGC	1 cut(s)	1104
BspPI	GGATC	3 cut(s)	807, 1850, 2213
BspT104I	TTCGAA	1 cut(s)	621
BspT107I	GGYRCC	1 cut(s)	2082
BspTI	CTTAAG	1 cut(s)	562
BsrDI	GCAATG	1 cut(s)	2013
BsrFI	RCCGGY	1 cut(s)	1935
BsrGI	TGTACA	1 cut(s)	1786
BsrI	ACTGG	2 cut(s)	989, 1904
BssAI	RCCGGY	1 cut(s)	1935
BssECI	CCNNGG	5 cut(s)	31, 594, 765, 843, 2104
BssHII	GCGCGC	1 cut(s)	1996
BssSI	CACGAG	1 cut(s)	2019
BssT1I	CCWWGG	3 cut(s)	31, 594, 765
Bst2BI	CACGAG	1 cut(s)	2019
Bst2UI	CCWGG	5 cut(s)	845, 933, 945, 1686, 2105
Bst4CI	ACNGT	5 cut(s)	235, 881, 980, 1111, 1627
Bst6I	CTCTTC	5 cut(s)	255, 1302, 1455, 1789, 1920
BstAFI	CTTAAG	1 cut(s)	562
BstAUI	TGTACA	1 cut(s)	1786
BstBAI	YACGTR	2 cut(s)	1277, 1513
BstBI	TTCGAA	1 cut(s)	621
BstC8I	GCNNGC	7 cut(s)	10, 497, 772, 1102, 1691, 1998, 2042
BstDEI	CTNAG	3 cut(s)	163, 1017, 1167
BstDSI	CCRYGG	2 cut(s)	31, 594
BstF5I	GGATG	5 cut(s)	423, 839, 1039, 1247, 2119
BstFNI	CGCG	2 cut(s)	257, 1998
BstH2I	RGCGCY	3 cut(s)	340, 509, 2008
BstHHI	GCGC	6 cut(s)	339, 508, 1428, 1998, 2000, 2007
BstMAI	GTCTC	2 cut(s)	442, 600
BstMWI	GCNNNNNNNGC	9 cut(s)	14, 222, 263, 469, 505, 514, 1086, 2002, 2004
BstNI	CCWGG	5 cut(s)	845, 933, 945, 1686, 2105
BstSCI	CCNGG	5 cut(s)	843, 931, 943, 1684, 2103
BstSFI	CTRYAG	1 cut(s)	1232
BstSNI	TACGTA	1 cut(s)	1513
BstUI	CGCG	2 cut(s)	257, 1998
BstV1I	GCAGC	6 cut(s)	225, 237, 240, 835, 1312, 1387
BstV2I	GAAGAC	2 cut(s)	1154, 2054
BstX2I	RGATCY	3 cut(s)	742, 1477, 2205
BstXI	CCANNNNNNTGG	2 cut(s)	721, 844
BstYI	RGATCY	3 cut(s)	742, 1477, 2205
Bsu15I	ATCGAT	1 cut(s)	375
BsuRI	GGCC	5 cut(s)	350, 635, 764, 1599, 1675
BsuTUI	ATCGAT	1 cut(s)	375
BtgI	CCRYGG	2 cut(s)	31, 594
BtgZI	GCGATG	1 cut(s)	1070
BtsCI	GGATG	5 cut(s)	423, 839, 1039, 1247, 2119
BtsI	GCAGTG	1 cut(s)	311
BtsIMutI	CAGTG	2 cut(s)	311, 396
Cac8I	GCNNGC	7 cut(s)	10, 497, 772, 1102, 1691, 1998, 2042
CaiI	CAGNNNCTG	1 cut(s)	984
CciI	TCATGA	1 cut(s)	2047
CfoI	GCGC	6 cut(s)	339, 508, 1428, 1998, 2000, 2007
Cfr10I	RCCGGY	1 cut(s)	1935
Cfr13I	GGNCC	6 cut(s)	173, 541, 633, 762, 947, 1960
ClaI	ATCGAT	1 cut(s)	375
CseI	GACGC	1 cut(s)	1830
Csp6I	GTAC	5 cut(s)	190, 1265, 1405, 1682, 1787
CspAI	ACCGGT	1 cut(s)	1935
CviQI	GTAC	5 cut(s)	190, 1265, 1405, 1682, 1787
DdeI	CTNAG	3 cut(s)	163, 1017, 1167
DraI	TTTAAA	1 cut(s)	919
DrdI	GACNNNNNNGTC	1 cut(s)	456
DseDI	GACNNNNNNGTC	1 cut(s)	456
EaeI	YGGCCR	1 cut(s)	1597
Eam1104I	CTCTTC	5 cut(s)	255, 1302, 1455, 1789, 1920
EarI	CTCTTC	5 cut(s)	255, 1302, 1455, 1789, 1920
EciI	GGCGGA	2 cut(s)	281, 1845
Ecl136II	GAGCTC	3 cut(s)	38, 583, 1723
Eco105I	TACGTA	1 cut(s)	1513
Eco130I	CCWWGG	3 cut(s)	31, 594, 765
Eco24I	GRGCYC	3 cut(s)	40, 585, 1725
Eco32I	GATATC	1 cut(s)	373
Eco47I	GGWCC	4 cut(s)	173, 541, 947, 1960
Eco53kI	GAGCTC	3 cut(s)	38, 583, 1723
Eco57I	CTGAAG	1 cut(s)	2093
Eco72I	CACGTG	1 cut(s)	1277
Eco88I	CYCGRG	1 cut(s)	528
EcoICRI	GAGCTC	3 cut(s)	38, 583, 1723
EcoRII	CCWGG	5 cut(s)	843, 931, 943, 1684, 2103
EcoRV	GATATC	1 cut(s)	373
EcoT14I	CCWWGG	3 cut(s)	31, 594, 765
EcoT38I	GRGCYC	3 cut(s)	40, 585, 1725
ErhI	CCWWGG	3 cut(s)	31, 594, 765
FalI	AAGNNNNNCTT	2 cut(s)	1010, 1042
FaqI	GGGAC	4 cut(s)	661, 1160, 1352, 1916
FauI	CCCGC	2 cut(s)	638, 2033
FauNDI	CATATG	1 cut(s)	676
Fnu4HI	GCNGC	8 cut(s)	211, 214, 226, 229, 849, 1301, 1376, 1530
FokI	GGATG	5 cut(s)	410, 826, 1046, 1254, 2126
FriOI	GRGCYC	3 cut(s)	40, 585, 1725
Fsp4HI	GCNGC	8 cut(s)	211, 214, 226, 229, 849, 1301, 1376, 1530
FspBI	CTAG	5 cut(s)	1101, 1286, 1379, 1665, 2123
FspI	TGCGCA	1 cut(s)	1427
GlaI	GCGC	6 cut(s)	338, 507, 1427, 1997, 1999, 2006
GluI	GCNGC	8 cut(s)	211, 214, 226, 229, 849, 1301, 1376, 1530
HaeII	RGCGCY	3 cut(s)	340, 509, 2008
HaeIII	GGCC	5 cut(s)	350, 635, 764, 1599, 1675
HapII	CCGG	4 cut(s)	445, 749, 1633, 1936
HgaI	GACGC	1 cut(s)	1830
HhaI	GCGC	6 cut(s)	339, 508, 1428, 1998, 2000, 2007
Hin6I	GCGC	6 cut(s)	337, 506, 1426, 1996, 1998, 2005
HinP1I	GCGC	6 cut(s)	337, 506, 1426, 1996, 1998, 2005
HincII	GTYRAC	2 cut(s)	1630, 2139
HindII	GTYRAC	2 cut(s)	1630, 2139
HindIII	AAGCTT	1 cut(s)	15
HinfI	GANTC	8 cut(s)	184, 342, 377, 699, 754, 1053, 1346, 1415
HpaII	CCGG	4 cut(s)	445, 749, 1633, 1936
HphI	GGTGA	2 cut(s)	763, 2089
Hpy166II	GTNNAC	5 cut(s)	238, 860, 1630, 1787, 2139
Hpy8I	GTNNAC	5 cut(s)	238, 860, 1630, 1787, 2139
Hpy99I	CGWCG	1 cut(s)	881
HpyCH4III	ACNGT	5 cut(s)	235, 881, 980, 1111, 1627
HpyCH4IV	ACGT	2 cut(s)	1276, 1512
HpyF10VI	GCNNNNNNNGC	9 cut(s)	14, 222, 263, 469, 505, 514, 1086, 2002, 2004
HpyF3I	CTNAG	3 cut(s)	163, 1017, 1167
HpySE526I	ACGT	2 cut(s)	1276, 1512
HspAI	GCGC	6 cut(s)	337, 506, 1426, 1996, 1998, 2005
LmnI	GCTCC	6 cut(s)	35, 334, 484, 588, 1123, 1728
Lsp1109I	GCAGC	6 cut(s)	225, 237, 240, 835, 1312, 1387
LweI	GCATC	7 cut(s)	472, 632, 1232, 1556, 1639, 1856, 2177
MaeI	CTAG	5 cut(s)	1101, 1286, 1379, 1665, 2123
MaeII	ACGT	2 cut(s)	1276, 1512
MaeIII	GTNAC	3 cut(s)	980, 1105, 1251
MflI	RGATCY	3 cut(s)	742, 1477, 2205
MhlI	GDGCHC	3 cut(s)	40, 585, 1725
MlsI	TGGCCA	1 cut(s)	1599
MluNI	TGGCCA	1 cut(s)	1599
MlyI	GAGTC	1 cut(s)	1340
MmeI	TCCRAC	1 cut(s)	462
Mox20I	TGGCCA	1 cut(s)	1599
MroXI	GAANNNNTTC	1 cut(s)	1161
MscI	TGGCCA	1 cut(s)	1599
MseI	TTAA	8 cut(s)	563, 684, 909, 918, 1113, 1400, 2216, 2232
MslI	CAYNNNNRTG	4 cut(s)	1089, 1275, 1605, 2200
Msp20I	TGGCCA	1 cut(s)	1599
MspCI	CTTAAG	1 cut(s)	562
MspI	CCGG	4 cut(s)	445, 749, 1633, 1936
MspR9I	CCNGG	5 cut(s)	845, 933, 945, 1686, 2105
Mva1269I	GAATGC	1 cut(s)	1227
MvaI	CCWGG	5 cut(s)	845, 933, 945, 1686, 2105
MvnI	CGCG	2 cut(s)	257, 1998
MwoI	GCNNNNNNNGC	9 cut(s)	14, 222, 263, 469, 505, 514, 1086, 2002, 2004
NcoI	CCATGG	2 cut(s)	31, 594
NdeI	CATATG	1 cut(s)	676
NheI	GCTAGC	1 cut(s)	1100
NlaIV	GGNNCC	3 cut(s)	175, 1962, 2084
NmeAIII	GCCGAG	2 cut(s)	1701, 2001
NsbI	TGCGCA	1 cut(s)	1427
NspV	TTCGAA	1 cut(s)	621
OliI	CACNNNNGTG	2 cut(s)	1275, 2200
PagI	TCATGA	1 cut(s)	2047
PauI	GCGCGC	1 cut(s)	1996
PctI	GAATGC	1 cut(s)	1227
PdmI	GAANNNNTTC	1 cut(s)	1161
PfeI	GAWTC	7 cut(s)	184, 342, 377, 699, 754, 1053, 1415
PflFI	GACNNNGTC	1 cut(s)	652
PinAI	ACCGGT	1 cut(s)	1935
PkrI	GCNGC	8 cut(s)	212, 215, 227, 230, 850, 1302, 1377, 1531
PleI	GAGTC	1 cut(s)	1340
PmaCI	CACGTG	1 cut(s)	1277
PmlI	CACGTG	1 cut(s)	1277
PpsI	GAGTC	1 cut(s)	1340
Ppu21I	YACGTR	2 cut(s)	1277, 1513
PshBI	ATTAAT	1 cut(s)	2232
Psp124BI	GAGCTC	3 cut(s)	40, 585, 1725
Psp6I	CCWGG	5 cut(s)	843, 931, 943, 1684, 2103
PspCI	CACGTG	1 cut(s)	1277
PspGI	CCWGG	5 cut(s)	843, 931, 943, 1684, 2103
PspN4I	GGNNCC	3 cut(s)	175, 1962, 2084
PspPI	GGNCC	6 cut(s)	173, 541, 633, 762, 947, 1960
PstI	CTGCAG	1 cut(s)	1236
PstNI	CAGNNNCTG	1 cut(s)	984
PsuI	RGATCY	3 cut(s)	742, 1477, 2205
PsyI	GACNNNGTC	1 cut(s)	652
PteI	GCGCGC	1 cut(s)	1996
RsaI	GTAC	5 cut(s)	191, 1266, 1406, 1683, 1788
RsaNI	GTAC	5 cut(s)	190, 1265, 1405, 1682, 1787
RseI	CAYNNNNRTG	4 cut(s)	1089, 1275, 1605, 2200
SacI	GAGCTC	3 cut(s)	40, 585, 1725
SaqAI	TTAA	8 cut(s)	563, 684, 909, 918, 1113, 1400, 2216, 2232
SatI	GCNGC	8 cut(s)	211, 214, 226, 229, 849, 1301, 1376, 1530
Sau96I	GGNCC	6 cut(s)	173, 541, 633, 762, 947, 1960
ScaI	AGTACT	1 cut(s)	1406
SchI	GAGTC	1 cut(s)	1340
ScrFI	CCNGG	5 cut(s)	845, 933, 945, 1686, 2105
SduI	GDGCHC	3 cut(s)	40, 585, 1725
SfaNI	GCATC	7 cut(s)	472, 632, 1232, 1556, 1639, 1856, 2177
SfcI	CTRYAG	1 cut(s)	1232
SfuI	TTCGAA	1 cut(s)	621
SinI	GGWCC	4 cut(s)	173, 541, 947, 1960
SmiMI	CAYNNNNRTG	4 cut(s)	1089, 1275, 1605, 2200
SmlI	CTYRAG	3 cut(s)	562, 1370, 2187
SmoI	CTYRAG	3 cut(s)	562, 1370, 2187
SnaBI	TACGTA	1 cut(s)	1513
SspI	AATATT	1 cut(s)	928
SspMI	CTAG	5 cut(s)	1101, 1286, 1379, 1665, 2123
SstI	GAGCTC	3 cut(s)	40, 585, 1725
StyD4I	CCNGG	5 cut(s)	843, 931, 943, 1684, 2103
StyI	CCWWGG	3 cut(s)	31, 594, 765
TaaI	ACNGT	5 cut(s)	235, 881, 980, 1111, 1627
TaiI	ACGT	2 cut(s)	1279, 1515
TaqI	TCGA	9 cut(s)	375, 522, 621, 876, 1056, 1354, 1654, 2092, 2241
TaqII	GACCGA	1 cut(s)	370
TatI	WGTACW	2 cut(s)	1404, 1786
TauI	GCSGC	2 cut(s)	213, 1532
TfiI	GAWTC	7 cut(s)	184, 342, 377, 699, 754, 1053, 1415
Tru1I	TTAA	8 cut(s)	563, 684, 909, 918, 1113, 1400, 2216, 2232
Tru9I	TTAA	8 cut(s)	563, 684, 909, 918, 1113, 1400, 2216, 2232
TscAI	CASTG	2 cut(s)	311, 403
TseI	GCWGC	6 cut(s)	213, 225, 228, 848, 1300, 1375
TspGWI	ACGGA	1 cut(s)	1583
TspRI	CASTG	2 cut(s)	311, 403
Tth111I	GACNNNGTC	1 cut(s)	652
Vha464I	CTTAAG	1 cut(s)	562
VpaK11BI	GGWCC	4 cut(s)	173, 541, 947, 1960
VspI	ATTAAT	1 cut(s)	2232
XapI	RAATTY	4 cut(s)	551, 787, 1489, 1730
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1896
XmnI	GAANNNNTTC	1 cut(s)	1161
XspI	CTAG	5 cut(s)	1101, 1286, 1379, 1665, 2123
ZrmI	AGTACT	1 cut(s)	1406

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.