Polyketide cyclase / dehydrase and lipid transport
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G08720 |
| fragaria_vesca | FvH4_3g12600 FvH4_3g12600 FvH4_3g12600 FvH4_3g12600 |
| malus_domestica | MD05G1249400.v1.1 |
| prunus_persica | Prupe.4G114800_v2.0.a1 Prupe.4G114800_v2.0.a1 |
| pyrus_communis | pycom05g22650 |
| rosa_chinensis | RchiOBHm_Chr5g0020561 |
| rosa_multiflora | Rmu_sc0018120.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00057730 |
| rosa_rugosa | Rorug05G0060700 Rorug05G0060800 Rorug05G0060900 |
| rosa_samantha | Rh5AG151200 Rh5BG150600 Rh5CG162100 Rh5DG150000 |
| rosa_wichuraiana | Rw5G013380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1695 |
| AatII | GACGTC | 1 cut(s) | 306 |
| Acc16I | TGCGCA | 1 cut(s) | 1250 |
| AccB1I | GGYRCC | 3 cut(s) | 170, 1902, 1984 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 398 |
| AccI | GTMKAC | 1 cut(s) | 706 |
| AccII | CGCG | 2 cut(s) | 1840, 1879 |
| AciI | CCGC | 5 cut(s) | 117, 262, 576, 1825, 1860 |
| AclWI | GGATC | 1 cut(s) | 2033 |
| AcsI | RAATTY | 5 cut(s) | 978, 1003, 1050, 1312, 1550 |
| AcuI | CTGAAG | 3 cut(s) | 461, 1040, 1290 |
| AcvI | CACGTG | 1 cut(s) | 1100 |
| AcyI | GRCGYC | 3 cut(s) | 171, 303, 777 |
| AfaI | GTAC | 4 cut(s) | 1089, 1229, 1321, 1417 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 66, 67, 277, 378, 398, 1006, 1914 |
| AflIII | ACRYGT | 1 cut(s) | 1099 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 387 |
| AhlI | ACTAGT | 1 cut(s) | 925 |
| AjiI | CACGTC | 1 cut(s) | 94 |
| AjnI | CCWGG | 5 cut(s) | 397, 581, 970, 1504, 1928 |
| AleI | CACNNNNGTG | 1 cut(s) | 2020 |
| Alw21I | GWGCWC | 3 cut(s) | 43, 439, 1545 |
| Alw26I | GTCTC | 2 cut(s) | 347, 1323 |
| AlwI | GGATC | 1 cut(s) | 2033 |
| Ama87I | CYCGRG | 2 cut(s) | 459, 863 |
| AoxI | GGCC | 6 cut(s) | 69, 279, 693, 716, 1493, 1861 |
| ApaI | GGGCCC | 1 cut(s) | 73 |
| ApeKI | GCWGC | 2 cut(s) | 872, 1198 |
| ApoI | RAATTY | 5 cut(s) | 978, 1003, 1050, 1312, 1550 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 858, 1808 |
| AspLEI | GCGC | 4 cut(s) | 173, 270, 1251, 1840 |
| AspS9I | GGNCC | 8 cut(s) | 69, 70, 125, 472, 579, 693, 1501, 1780 |
| AsuHPI | GGTGA | 3 cut(s) | 244, 319, 986 |
| AsuNHI | GCTAGC | 1 cut(s) | 797 |
| AvaI | CYCGRG | 2 cut(s) | 459, 863 |
| AvaII | GGWCC | 5 cut(s) | 125, 472, 579, 1501, 1780 |
| BaeGI | GKGCMC | 1 cut(s) | 73 |
| BanI | GGYRCC | 3 cut(s) | 170, 1902, 1984 |
| BanII | GRGCYC | 3 cut(s) | 43, 73, 1545 |
| BbrPI | CACGTG | 1 cut(s) | 1100 |
| BbsI | GAAGAC | 3 cut(s) | 97, 851, 1874 |
| Bbv12I | GWGCWC | 3 cut(s) | 43, 439, 1545 |
| BbvI | GCAGC | 2 cut(s) | 859, 1210 |
| BccI | CCATC | 6 cut(s) | 126, 527, 749, 789, 1427, 1996 |
| BceAI | ACGGC | 4 cut(s) | 158, 172, 184, 1931 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 854, 888, 1344, 1378 |
| BciT130I | CCWGG | 5 cut(s) | 399, 583, 972, 1506, 1930 |
| BciVI | GTATCC | 1 cut(s) | 1249 |
| BclI | TGATCA | 2 cut(s) | 3, 1450 |
| BcoDI | GTCTC | 2 cut(s) | 347, 1323 |
| BcuI | ACTAGT | 1 cut(s) | 925 |
| BfaI | CTAG | 5 cut(s) | 798, 926, 1109, 1202, 1485 |
| BfoI | RGCGCY | 2 cut(s) | 174, 271 |
| BfuI | GTATCC | 1 cut(s) | 1249 |
| BglII | AGATCT | 2 cut(s) | 673, 1300 |
| BisI | GCNGC | 3 cut(s) | 873, 1199, 1861 |
| BlsI | GCNGC | 3 cut(s) | 874, 1200, 1862 |
| Bme1390I | CCNGG | 5 cut(s) | 399, 583, 972, 1506, 1930 |
| Bme18I | GGWCC | 5 cut(s) | 125, 472, 579, 1501, 1780 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 387 |
| BmeT110I | CYCGRG | 2 cut(s) | 459, 863 |
| BmgBI | CACGTC | 1 cut(s) | 94 |
| BmgT120I | GGNCC | 8 cut(s) | 69, 70, 125, 472, 579, 693, 1501, 1780 |
| BmrFI | CCNGG | 5 cut(s) | 399, 583, 972, 1506, 1930 |
| BmrI | ACTGGG | 1 cut(s) | 1729 |
| BmsI | GCATC | 3 cut(s) | 904, 1708, 1924 |
| BmtI | GCTAGC | 1 cut(s) | 801 |
| BmuI | ACTGGG | 1 cut(s) | 1729 |
| BpiI | GAAGAC | 3 cut(s) | 97, 851, 1874 |
| BpmI | CTGGAG | 1 cut(s) | 434 |
| BpuEI | CTTGAG | 2 cut(s) | 1214, 1992 |
| BsaAI | YACGTR | 2 cut(s) | 1100, 2002 |
| BsaHI | GRCGYC | 3 cut(s) | 171, 303, 777 |
| BsaJI | CCNNGG | 7 cut(s) | 34, 398, 525, 696, 1496, 1504, 1929 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 66, 67, 277, 378, 398, 1006, 1914 |
| Bse1I | ACTGG | 4 cut(s) | 139, 372, 1413, 1724 |
| Bse3DI | GCAATG | 2 cut(s) | 1833, 1923 |
| BseBI | CCWGG | 5 cut(s) | 399, 583, 972, 1506, 1930 |
| BseDI | CCNNGG | 7 cut(s) | 34, 398, 525, 696, 1496, 1504, 1929 |
| BseGI | GGATG | 7 cut(s) | 354, 394, 736, 1070, 1409, 1939, 1988 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 66, 67, 277, 378, 398, 1006, 1914 |
| BseMI | GCAATG | 2 cut(s) | 1833, 1923 |
| BseMII | CTCAG | 2 cut(s) | 1487, 2043 |
| BseNI | ACTGG | 4 cut(s) | 139, 372, 1413, 1724 |
| BseRI | GAGGAG | 2 cut(s) | 234, 1780 |
| BseSI | GKGCMC | 1 cut(s) | 73 |
| BseXI | GCAGC | 2 cut(s) | 859, 1210 |
| BseYI | CCCAGC | 2 cut(s) | 1770, 1796 |
| BsgI | GTGCAG | 1 cut(s) | 1839 |
| Bsh1236I | CGCG | 2 cut(s) | 1840, 1879 |
| BshFI | GGCC | 6 cut(s) | 71, 281, 695, 718, 1495, 1863 |
| BshNI | GGYRCC | 3 cut(s) | 170, 1902, 1984 |
| BsiHKAI | GWGCWC | 3 cut(s) | 43, 439, 1545 |
| BsiHKCI | CYCGRG | 2 cut(s) | 459, 863 |
| BslFI | GGGAC | 5 cut(s) | 551, 592, 983, 1175, 1487 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 66, 67, 277, 378, 398, 1006, 1914 |
| BsmAI | GTCTC | 2 cut(s) | 347, 1323 |
| BsmBI | CGTCTC | 1 cut(s) | 347 |
| BsmFI | GGGAC | 5 cut(s) | 551, 592, 983, 1175, 1487 |
| BsnI | GGCC | 6 cut(s) | 71, 281, 695, 718, 1495, 1863 |
| BsoBI | CYCGRG | 2 cut(s) | 459, 863 |
| Bsp120I | GGGCCC | 1 cut(s) | 69 |
| Bsp1286I | GDGCHC | 4 cut(s) | 43, 73, 439, 1545 |
| Bsp1407I | TGTACA | 1 cut(s) | 1319 |
| Bsp143I | GATC | 8 cut(s) | 3, 505, 668, 673, 1300, 1450, 1945, 2025 |
| Bsp19I | CCATGG | 1 cut(s) | 525 |
| BspACI | CCGC | 5 cut(s) | 117, 262, 576, 1825, 1860 |
| BspANI | GGCC | 6 cut(s) | 71, 281, 695, 718, 1495, 1863 |
| BspCNI | CTCAG | 2 cut(s) | 1486, 2042 |
| BspFNI | CGCG | 2 cut(s) | 1840, 1879 |
| BspOI | GCTAGC | 1 cut(s) | 801 |
| BspPI | GGATC | 1 cut(s) | 2033 |
| BspQI | GCTCTTC | 1 cut(s) | 945 |
| BspT107I | GGYRCC | 3 cut(s) | 170, 1902, 1984 |
| BsrDI | GCAATG | 2 cut(s) | 1833, 1923 |
| BsrGI | TGTACA | 1 cut(s) | 1319 |
| BsrI | ACTGG | 4 cut(s) | 139, 372, 1413, 1724 |
| BssECI | CCNNGG | 7 cut(s) | 34, 398, 525, 696, 1496, 1504, 1929 |
| BssMI | GATC | 8 cut(s) | 3, 505, 668, 673, 1300, 1450, 1945, 2025 |
| BssNI | GRCGYC | 3 cut(s) | 171, 303, 777 |
| BssT1I | CCWWGG | 3 cut(s) | 525, 696, 1496 |
| Bst2UI | CCWGG | 5 cut(s) | 399, 583, 972, 1506, 1930 |
| Bst4CI | ACNGT | 5 cut(s) | 441, 808, 1234, 1359, 1447 |
| Bst6I | CTCTTC | 5 cut(s) | 195, 945, 1278, 1609, 1740 |
| BstACI | GRCGYC | 3 cut(s) | 171, 303, 777 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1973 |
| BstAUI | TGTACA | 1 cut(s) | 1319 |
| BstBAI | YACGTR | 2 cut(s) | 1100, 2002 |
| BstC8I | GCNNGC | 4 cut(s) | 428, 799, 1818, 1842 |
| BstDEI | CTNAG | 2 cut(s) | 1473, 2029 |
| BstDSI | CCRYGG | 2 cut(s) | 34, 525 |
| BstF5I | GGATG | 7 cut(s) | 354, 394, 736, 1070, 1409, 1939, 1988 |
| BstFNI | CGCG | 2 cut(s) | 1840, 1879 |
| BstH2I | RGCGCY | 2 cut(s) | 174, 271 |
| BstHHI | GCGC | 4 cut(s) | 173, 270, 1251, 1840 |
| BstKTI | GATC | 8 cut(s) | 6, 508, 671, 676, 1303, 1453, 1948, 2028 |
| BstMAI | GTCTC | 2 cut(s) | 347, 1323 |
| BstMBI | GATC | 8 cut(s) | 3, 505, 668, 673, 1300, 1450, 1945, 2025 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 38, 203, 409, 1822, 1934, 1973, 1982 |
| BstNI | CCWGG | 5 cut(s) | 399, 583, 972, 1506, 1930 |
| BstNSI | RCATGY | 2 cut(s) | 1374, 1795 |
| BstSCI | CCNGG | 5 cut(s) | 397, 581, 970, 1504, 1928 |
| BstSLI | GKGCMC | 1 cut(s) | 73 |
| BstSNI | TACGTA | 1 cut(s) | 2002 |
| BstUI | CGCG | 2 cut(s) | 1840, 1879 |
| BstV1I | GCAGC | 2 cut(s) | 859, 1210 |
| BstV2I | GAAGAC | 3 cut(s) | 97, 851, 1874 |
| BstX2I | RGATCY | 3 cut(s) | 673, 1300, 2025 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 652 |
| BstYI | RGATCY | 3 cut(s) | 673, 1300, 2025 |
| BsuI | GTATCC | 1 cut(s) | 1249 |
| BsuRI | GGCC | 6 cut(s) | 71, 281, 695, 718, 1495, 1863 |
| BtgI | CCRYGG | 2 cut(s) | 34, 525 |
| BtrI | CACGTC | 1 cut(s) | 94 |
| BtsCI | GGATG | 7 cut(s) | 354, 394, 736, 1070, 1409, 1939, 1988 |
| BtsIMutI | CAGTG | 5 cut(s) | 146, 379, 437, 1230, 1670 |
| Cac8I | GCNNGC | 4 cut(s) | 428, 799, 1818, 1842 |
| CfoI | GCGC | 4 cut(s) | 173, 270, 1251, 1840 |
| Cfr13I | GGNCC | 8 cut(s) | 69, 70, 125, 472, 579, 693, 1501, 1780 |
| CseI | GACGC | 3 cut(s) | 329, 766, 1868 |
| CsiI | ACCWGGT | 2 cut(s) | 581, 970 |
| Csp6I | GTAC | 4 cut(s) | 1088, 1228, 1320, 1416 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 478, 513 |
| CviQI | GTAC | 4 cut(s) | 1088, 1228, 1320, 1416 |
| DdeI | CTNAG | 2 cut(s) | 1473, 2029 |
| DinI | GGCGCC | 1 cut(s) | 172 |
| DpnI | GATC | 8 cut(s) | 5, 507, 670, 675, 1302, 1452, 1947, 2027 |
| DpnII | GATC | 8 cut(s) | 3, 505, 668, 673, 1300, 1450, 1945, 2025 |
| DriI | GACNNNNNGTC | 1 cut(s) | 387 |
| Eam1104I | CTCTTC | 5 cut(s) | 195, 945, 1278, 1609, 1740 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 387 |
| EarI | CTCTTC | 5 cut(s) | 195, 945, 1278, 1609, 1740 |
| Ecl136II | GAGCTC | 2 cut(s) | 41, 1543 |
| Eco105I | TACGTA | 1 cut(s) | 2002 |
| Eco130I | CCWWGG | 3 cut(s) | 525, 696, 1496 |
| Eco147I | AGGCCT | 1 cut(s) | 718 |
| Eco24I | GRGCYC | 3 cut(s) | 43, 73, 1545 |
| Eco32I | GATATC | 2 cut(s) | 1624, 2050 |
| Eco47I | GGWCC | 5 cut(s) | 125, 472, 579, 1501, 1780 |
| Eco53kI | GAGCTC | 2 cut(s) | 41, 1543 |
| Eco57I | CTGAAG | 3 cut(s) | 461, 1040, 1290 |
| Eco72I | CACGTG | 1 cut(s) | 1100 |
| Eco88I | CYCGRG | 2 cut(s) | 459, 863 |
| EcoICRI | GAGCTC | 2 cut(s) | 41, 1543 |
| EcoO109I | RGGNCCY | 2 cut(s) | 70, 1501 |
| EcoRI | GAATTC | 1 cut(s) | 1050 |
| EcoRII | CCWGG | 5 cut(s) | 397, 581, 970, 1504, 1928 |
| EcoRV | GATATC | 2 cut(s) | 1624, 2050 |
| EcoT14I | CCWWGG | 3 cut(s) | 525, 696, 1496 |
| EcoT22I | ATGCAT | 1 cut(s) | 897 |
| EcoT38I | GRGCYC | 3 cut(s) | 43, 73, 1545 |
| EgeI | GGCGCC | 1 cut(s) | 172 |
| EheI | GGCGCC | 1 cut(s) | 172 |
| ErhI | CCWWGG | 3 cut(s) | 525, 696, 1496 |
| Esp3I | CGTCTC | 1 cut(s) | 347 |
| FaqI | GGGAC | 5 cut(s) | 551, 592, 983, 1175, 1487 |
| FauI | CCCGC | 2 cut(s) | 255, 569 |
| FauNDI | CATATG | 1 cut(s) | 607 |
| FbaI | TGATCA | 2 cut(s) | 3, 1450 |
| FblI | GTMKAC | 1 cut(s) | 706 |
| Fnu4HI | GCNGC | 3 cut(s) | 873, 1199, 1861 |
| FokI | GGATG | 7 cut(s) | 341, 381, 743, 1077, 1396, 1946, 1975 |
| FriOI | GRGCYC | 3 cut(s) | 43, 73, 1545 |
| Fsp4HI | GCNGC | 3 cut(s) | 873, 1199, 1861 |
| FspBI | CTAG | 5 cut(s) | 798, 926, 1109, 1202, 1485 |
| FspI | TGCGCA | 1 cut(s) | 1250 |
| GlaI | GCGC | 4 cut(s) | 172, 269, 1250, 1839 |
| GluI | GCNGC | 3 cut(s) | 873, 1199, 1861 |
| GsaI | CCCAGC | 2 cut(s) | 1774, 1800 |
| GsuI | CTGGAG | 1 cut(s) | 434 |
| HaeII | RGCGCY | 2 cut(s) | 174, 271 |
| HaeIII | GGCC | 6 cut(s) | 71, 281, 695, 718, 1495, 1863 |
| HgaI | GACGC | 3 cut(s) | 329, 766, 1868 |
| HhaI | GCGC | 4 cut(s) | 173, 270, 1251, 1840 |
| Hin1I | GRCGYC | 3 cut(s) | 171, 303, 777 |
| Hin6I | GCGC | 4 cut(s) | 171, 268, 1249, 1838 |
| HinP1I | GCGC | 4 cut(s) | 171, 268, 1249, 1838 |
| HindIII | AAGCTT | 2 cut(s) | 15, 1387 |
| HphI | GGTGA | 3 cut(s) | 244, 319, 986 |
| Hpy166II | GTNNAC | 7 cut(s) | 178, 392, 707, 968, 1121, 1230, 1607 |
| Hpy8I | GTNNAC | 7 cut(s) | 178, 392, 707, 968, 1121, 1230, 1607 |
| Hpy99I | CGWCG | 2 cut(s) | 305, 308 |
| HpyCH4III | ACNGT | 5 cut(s) | 441, 808, 1234, 1359, 1447 |
| HpyCH4IV | ACGT | 4 cut(s) | 93, 303, 1099, 2001 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 38, 203, 409, 1822, 1934, 1973, 1982 |
| HpyF3I | CTNAG | 2 cut(s) | 1473, 2029 |
| HpySE526I | ACGT | 4 cut(s) | 93, 303, 1099, 2001 |
| Hsp92I | GRCGYC | 3 cut(s) | 171, 303, 777 |
| HspAI | GCGC | 4 cut(s) | 171, 268, 1249, 1838 |
| KasI | GGCGCC | 1 cut(s) | 170 |
| KflI | GGGWCCC | 1 cut(s) | 1501 |
| Ksp22I | TGATCA | 2 cut(s) | 3, 1450 |
| Kzo9I | GATC | 8 cut(s) | 3, 505, 668, 673, 1300, 1450, 1945, 2025 |
| LguI | GCTCTTC | 1 cut(s) | 945 |
| LmnI | GCTCC | 6 cut(s) | 38, 265, 415, 820, 1548, 1767 |
| Lsp1109I | GCAGC | 2 cut(s) | 859, 1210 |
| LweI | GCATC | 3 cut(s) | 904, 1708, 1924 |
| MabI | ACCWGGT | 2 cut(s) | 581, 970 |
| MaeI | CTAG | 5 cut(s) | 798, 926, 1109, 1202, 1485 |
| MaeII | ACGT | 4 cut(s) | 93, 303, 1099, 2001 |
| MaeIII | GTNAC | 3 cut(s) | 928, 1715, 1887 |
| MalI | GATC | 8 cut(s) | 5, 507, 670, 675, 1302, 1452, 1947, 2027 |
| MboI | GATC | 8 cut(s) | 3, 505, 668, 673, 1300, 1450, 1945, 2025 |
| MfeI | CAATTG | 2 cut(s) | 1454, 2053 |
| MflI | RGATCY | 3 cut(s) | 673, 1300, 2025 |
| MhlI | GDGCHC | 4 cut(s) | 43, 73, 439, 1545 |
| Mly113I | GGCGCC | 1 cut(s) | 171 |
| MlyI | GAGTC | 3 cut(s) | 282, 376, 1163 |
| MmeI | TCCRAC | 1 cut(s) | 998 |
| Mph1103I | ATGCAT | 1 cut(s) | 897 |
| MroXI | GAANNNNTTC | 2 cut(s) | 858, 1808 |
| MseI | TTAA | 1 cut(s) | 2036 |
| MslI | CAYNNNNRTG | 5 cut(s) | 786, 1098, 1428, 1643, 2020 |
| MspA1I | CMGCKG | 1 cut(s) | 119 |
| MspR9I | CCNGG | 5 cut(s) | 399, 583, 972, 1506, 1930 |
| MunI | CAATTG | 2 cut(s) | 1454, 2053 |
| MvaI | CCWGG | 5 cut(s) | 399, 583, 972, 1506, 1930 |
| MvnI | CGCG | 2 cut(s) | 1840, 1879 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 38, 203, 409, 1822, 1934, 1973, 1982 |
| NarI | GGCGCC | 1 cut(s) | 171 |
| NcoI | CCATGG | 1 cut(s) | 525 |
| NdeI | CATATG | 1 cut(s) | 607 |
| NdeII | GATC | 8 cut(s) | 3, 505, 668, 673, 1300, 1450, 1945, 2025 |
| NheI | GCTAGC | 1 cut(s) | 797 |
| NmeAIII | GCCGAG | 3 cut(s) | 296, 307, 1564 |
| NmuCI | GTSAC | 1 cut(s) | 1887 |
| NsbI | TGCGCA | 1 cut(s) | 1250 |
| NsiI | ATGCAT | 1 cut(s) | 897 |
| NspI | RCATGY | 2 cut(s) | 1374, 1795 |
| OliI | CACNNNNGTG | 1 cut(s) | 2020 |
| PaeR7I | CTCGAG | 1 cut(s) | 459 |
| PceI | AGGCCT | 1 cut(s) | 718 |
| PciSI | GCTCTTC | 1 cut(s) | 945 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 309, 327 |
| PdmI | GAANNNNTTC | 2 cut(s) | 858, 1808 |
| PfeI | GAWTC | 7 cut(s) | 308, 630, 750, 1238, 1463, 1653, 1678 |
| PflFI | GACNNNGTC | 1 cut(s) | 583 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 398 |
| PkrI | GCNGC | 3 cut(s) | 874, 1200, 1862 |
| PleI | GAGTC | 3 cut(s) | 281, 376, 1163 |
| PluTI | GGCGCC | 1 cut(s) | 174 |
| PmaCI | CACGTG | 1 cut(s) | 1100 |
| PmlI | CACGTG | 1 cut(s) | 1100 |
| PpsI | GAGTC | 3 cut(s) | 281, 376, 1163 |
| Ppu21I | YACGTR | 2 cut(s) | 1100, 2002 |
| PpuMI | RGGWCCY | 1 cut(s) | 1501 |
| PsiI | TTATAA | 1 cut(s) | 1695 |
| Psp124BI | GAGCTC | 2 cut(s) | 43, 1545 |
| Psp5II | RGGWCCY | 1 cut(s) | 1501 |
| Psp6I | CCWGG | 5 cut(s) | 397, 581, 970, 1504, 1928 |
| PspCI | CACGTG | 1 cut(s) | 1100 |
| PspFI | CCCAGC | 2 cut(s) | 1770, 1796 |
| PspGI | CCWGG | 5 cut(s) | 397, 581, 970, 1504, 1928 |
| PspOMI | GGGCCC | 1 cut(s) | 69 |
| PspPI | GGNCC | 8 cut(s) | 69, 70, 125, 472, 579, 693, 1501, 1780 |
| PspPPI | RGGWCCY | 1 cut(s) | 1501 |
| PspXI | VCTCGAGB | 1 cut(s) | 459 |
| PsuI | RGATCY | 3 cut(s) | 673, 1300, 2025 |
| PsyI | GACNNNGTC | 1 cut(s) | 583 |
| RsaI | GTAC | 4 cut(s) | 1089, 1229, 1321, 1417 |
| RsaNI | GTAC | 4 cut(s) | 1088, 1228, 1320, 1416 |
| RseI | CAYNNNNRTG | 5 cut(s) | 786, 1098, 1428, 1643, 2020 |
| SacI | GAGCTC | 2 cut(s) | 43, 1545 |
| SapI | GCTCTTC | 1 cut(s) | 945 |
| SaqAI | TTAA | 1 cut(s) | 2036 |
| SatI | GCNGC | 3 cut(s) | 873, 1199, 1861 |
| Sau3AI | GATC | 8 cut(s) | 3, 505, 668, 673, 1300, 1450, 1945, 2025 |
| Sau96I | GGNCC | 8 cut(s) | 69, 70, 125, 472, 579, 693, 1501, 1780 |
| SchI | GAGTC | 3 cut(s) | 282, 376, 1163 |
| ScrFI | CCNGG | 5 cut(s) | 399, 583, 972, 1506, 1930 |
| SduI | GDGCHC | 4 cut(s) | 43, 73, 439, 1545 |
| SexAI | ACCWGGT | 2 cut(s) | 581, 970 |
| SfaNI | GCATC | 3 cut(s) | 904, 1708, 1924 |
| SfoI | GGCGCC | 1 cut(s) | 172 |
| Sfr274I | CTCGAG | 1 cut(s) | 459 |
| SinI | GGWCC | 5 cut(s) | 125, 472, 579, 1501, 1780 |
| SlaI | CTCGAG | 1 cut(s) | 459 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 786, 1098, 1428, 1643, 2020 |
| SmlI | CTYRAG | 3 cut(s) | 459, 1193, 2007 |
| SmoI | CTYRAG | 3 cut(s) | 459, 1193, 2007 |
| SnaBI | TACGTA | 1 cut(s) | 2002 |
| SpeI | ACTAGT | 1 cut(s) | 925 |
| SseBI | AGGCCT | 1 cut(s) | 718 |
| SsiI | CCGC | 5 cut(s) | 117, 262, 576, 1825, 1860 |
| SspDI | GGCGCC | 1 cut(s) | 170 |
| SspMI | CTAG | 5 cut(s) | 798, 926, 1109, 1202, 1485 |
| SstI | GAGCTC | 2 cut(s) | 43, 1545 |
| StuI | AGGCCT | 1 cut(s) | 718 |
| StyD4I | CCNGG | 5 cut(s) | 397, 581, 970, 1504, 1928 |
| StyI | CCWWGG | 3 cut(s) | 525, 696, 1496 |
| TaaI | ACNGT | 5 cut(s) | 441, 808, 1234, 1359, 1447 |
| TaiI | ACGT | 4 cut(s) | 96, 306, 1102, 2004 |
| TaqII | GACCGA | 1 cut(s) | 280 |
| TatI | WGTACW | 3 cut(s) | 1227, 1319, 1415 |
| TauI | GCSGC | 1 cut(s) | 1863 |
| TfiI | GAWTC | 7 cut(s) | 308, 630, 750, 1238, 1463, 1653, 1678 |
| Tru1I | TTAA | 1 cut(s) | 2036 |
| Tru9I | TTAA | 1 cut(s) | 2036 |
| TscAI | CASTG | 5 cut(s) | 146, 379, 444, 1237, 1677 |
| TseFI | GTSAC | 1 cut(s) | 1887 |
| TseI | GCWGC | 2 cut(s) | 872, 1198 |
| Tsp45I | GTSAC | 1 cut(s) | 1887 |
| TspGWI | ACGGA | 4 cut(s) | 51, 138, 301, 1456 |
| TspRI | CASTG | 5 cut(s) | 146, 379, 444, 1237, 1677 |
| Tth111I | GACNNNGTC | 1 cut(s) | 583 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 398 |
| VpaK11BI | GGWCC | 5 cut(s) | 125, 472, 579, 1501, 1780 |
| XapI | RAATTY | 5 cut(s) | 978, 1003, 1050, 1312, 1550 |
| XceI | RCATGY | 2 cut(s) | 1374, 1795 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1430, 1716 |
| XhoI | CTCGAG | 1 cut(s) | 459 |
| XmiI | GTMKAC | 1 cut(s) | 706 |
| XmnI | GAANNNNTTC | 2 cut(s) | 858, 1808 |
| XspI | CTAG | 5 cut(s) | 798, 926, 1109, 1202, 1485 |
| ZraI | GACGTC | 1 cut(s) | 304 |
| Zsp2I | ATGCAT | 1 cut(s) | 897 |