Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0013048

Physical Location & Seq

Genomic Coordinates Reverse (-)

42352959 .. 42354713

Gene Structure 1755 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1292000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1755 bp

ATGCTAAGATTTCCCGCCATTTTTCAAAGCCTCAGAGCCTCACAGTTTCCACTTTCACTCTCCCTTTCACGCTCCAATTTACACAAAAGTTTTCCGAAACTCTCCGAATGCTTGGTGGGTTTGATGAATTACACCAAATTGACCGCCCCATCTTACAAATCACTGCTTTCTGATCACCTAAAGAACCAAAATCTAGACCAAGCTCGCCGAGTTTTCAATGAAATCCCTTTTCCCAGCGTTGATTTGTACACCGTGATGATCACGGGGTATGCGCGAATGCGCAGGCTCGACAATGCCCTCAAACTGTTCTACGAAATGCCTGAGAAGGATGCAGTCTCTTGGAATTCGATGATCAAAGGGTGTTTGGATTGTGGGGATTTGAGCAAGGCTAAGGAGCTTTTTGATGGAATGCCTGGAAAGAGTGTTGTTTCGTGGACGACGATTATGAATGGATTCTTGCAGTTTGGTGATGTTGAGATGGCAGAGCGGTTGTTTCGCGAGATGCCTGTGAGGGATGTGGCGGTTTGGAATTCGATGATTCATGGATACTTCAGTAATGGAAGAGTGGAAGATGCTAAGAAGTTGTTTGGAGTGATGCATTGTAAGAATGTGATTTCGTGGACTTCGATGATTGGGGGGCTTGACAGAATTGGGAGGACGGATGAAGCTTTGCAATTTTTTCGAGAGATGATGGGTTCTGGTGTGCAACCCACTTTGACAACACTTGTGTGTGTGGTGACAGCTTCTGCAAATTTGTTGCGTTTAGATTTAGGTGTTCAGATTCATGGTCAGATTGTCAAGTTAGGGTACTGCTTCGACGAGTATGTAGCTGCTTCATTTATAACACTCTATGCAAACTGCAAGCAAATGGAGAATTCGTACAACGTTTTCAACGAGAGCTTGCATAAGAATGTTGTAGTATGGACGGCTCTTTTGACAGGATGTGGTTTGAACTGTCAACACGAAGATGCGTTGAGGGTTTTCAGGAACATGCTGAAATCGGGCGTCCTTCCTAATCAGTCTTCTTTCACTAGTGCTTTGAATTCGTGTTGCGGATTAGCAGATCTTGATCGGGGCAAGGAGATTCAAACATCAGCGGTTAAGCTAGGTTTTGAAACTGATGTCTTTGTCGGTAATTCACTCATCGTCTTGTATACAAAATGTGGAAGCATAAATGATGGAGTTGTTATATTTAAGAGAATCGGTGATAAGAACATTGTGTCATGGAACTCAACCATAGTCGGATGTGCGCAACACGGTTGTGGCATGTGGGCTTTGACACTCTTTAACCAAATGATACGTGCTGGAGTAGAGCCAGATGAAATCACATTCACGGGGCTCCTTTCTGCGTGCAGCCATTCCGGGATGTTACAGAAAGCAAGACGCTTTTTCGAATACTTCTCGCAGCGGAAGTCTGTCGAGGTGAAACTTGAGCACTACGCATGTATGGTGGATGTCTTAGCTCGATGCGGTGAGTTGGAAGAAGCAGAGGAGCTGATTAAGAACATGCCCGTGCAAGCGAACAAGACGGTATGGCTAACTTTACTTGGCGCTTGCACGATGCATTGCAATTTCGACGTGGCTGAAAGAGCTGCAAAACGCATTGAAGATCTTGACCCGCATTGCAGTGCTGCTTATGTTTTACTGTCAAATTTATATGCTTCTGCAAATAGATGGAGCGACGTCTCGAGAATTCGAGAGAAGATGAAACAGACGAGAACTGTAAAACAACCTGGTTACAGTTGGGTTACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

585

Amino Acids

65.57

Weight (kDa)

8.39

Isoelectric Point (pI)

40.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR	PF01535	83 - 109	2.6e-06	PPR repeat
PPR	PF01535	112 - 140	2e-06	PPR repeat
PPR_2	PF13041	141 - 173	1.5e-06	PPR repeat family
PPR	PF01535	143 - 171	2.1e-06	PPR repeat
PPR_2	PF13041	171 - 204	5e-07	PPR repeat family
PPR_1	PF12854	172 - 199	1.9e-06	PPR repeat
PPR	PF01535	175 - 203	3.2e-07	PPR repeat
PPR_2	PF13041	202 - 247	3e-07	PPR repeat family
PPR_2	PF13041	303 - 351	7.4e-11	PPR repeat family
PPR_2	PF13041	404 - 452	2.5e-10	PPR repeat family
E_motif	PF20431	522 - 583	4.6e-18	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013048)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46460
fragaria_vesca	FvH4_5g29861 FvH4_5g29861
malus_domestica	MD05G1292000.v1.1
prunus_persica	Prupe.4G073400_v2.0.a1
pyrus_communis	pycom05g26840 pycom10g22400
rosa_chinensis	RchiOBHm_Chr5g0012881
rosa_laevigata	RLG00000031964
rosa_multiflora	Rmu_co8223558.1_g000001 Rmu_sc0010496.1_g000006
rosa_roxburghii	Rroxscaffold_1G00063720
rosa_rugosa	Rorug05G0005000
rosa_samantha	Rh5AG098900 Rh5BG095700 Rh5CG107900 Rh5DG094400
rosa_wichuraiana	Rw5G008650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	842
AatII	GACGTC	1 cut(s)	1686
Acc16I	TGCGCA	2 cut(s)	281, 1251
AccBSI	CCGCTC	1 cut(s)	487
AccI	GTMKAC	1 cut(s)	1154
AccII	CGCG	2 cut(s)	274, 498
AciI	CCGC	9 cut(s)	15, 144, 487, 521, 1053, 1097, 1408, 1470, 1619
AclI	AACGTT	1 cut(s)	885
AcsI	RAATTY	7 cut(s)	343, 529, 751, 874, 1042, 1651, 1692
AcuI	CTGAAG	1 cut(s)	535
AcyI	GRCGYC	2 cut(s)	1005, 1683
AfaI	GTAC	3 cut(s)	248, 809, 881
AgsI	TTSAA	8 cut(s)	26, 217, 892, 952, 1042, 1088, 1115, 1607
AhlI	ACTAGT	1 cut(s)	1031
AjiI	CACGTC	1 cut(s)	1579
AjnI	CCWGG	2 cut(s)	412, 1732
AleI	CACNNNNGTG	2 cut(s)	727, 1260
Alw21I	GWGCWC	1 cut(s)	1437
Alw26I	GTCTC	2 cut(s)	340, 1690
AlwNI	CAGNNNCTG	1 cut(s)	746
Ama87I	CYCGRG	1 cut(s)	1687
ApeKI	GCWGC	5 cut(s)	830, 1353, 1405, 1592, 1631
ApoI	RAATTY	7 cut(s)	343, 529, 751, 874, 1042, 1651, 1692
ArsI	GACNNNNNNTTYG	2 cut(s)	916, 948
Asp700I	GAANNNNTTC	1 cut(s)	452
AspLEI	GCGC	4 cut(s)	274, 282, 1252, 1553
AsuC2I	CCSGG	1 cut(s)	1363
AsuHPI	GGTGA	6 cut(s)	167, 479, 748, 1217, 1435, 1484
AsuII	TTCGAA	1 cut(s)	1392
AvaI	CYCGRG	1 cut(s)	1687
BaeI	ACNNNNGTAYC	2 cut(s)	538, 571
BanII	GRGCYC	1 cut(s)	1341
BbsI	GAAGAC	1 cut(s)	1014
Bbv12I	GWGCWC	1 cut(s)	1437
BbvI	GCAGC	5 cut(s)	817, 1365, 1417, 1579, 1618
BccI	CCATC	6 cut(s)	157, 398, 472, 685, 1172, 1668
BceAI	ACGGC	1 cut(s)	942
BcgI	CGANNNNNNTGC	2 cut(s)	662, 696
BciT130I	CCWGG	2 cut(s)	414, 1734
BciVI	GTATCC	1 cut(s)	539
BclI	TGATCA	3 cut(s)	172, 258, 351
BcnI	CCSGG	1 cut(s)	1363
BcoDI	GTCTC	2 cut(s)	340, 1690
BcuI	ACTAGT	1 cut(s)	1031
BfaI	CTAG	3 cut(s)	194, 1032, 1106
BfoI	RGCGCY	1 cut(s)	1554
BfuI	GTATCC	1 cut(s)	539
BglII	AGATCT	2 cut(s)	1063, 1609
BisI	GCNGC	5 cut(s)	831, 1354, 1406, 1593, 1632
BlsI	GCNGC	5 cut(s)	832, 1355, 1407, 1594, 1633
Bme1390I	CCNGG	3 cut(s)	414, 1363, 1734
BmeT110I	CYCGRG	1 cut(s)	1687
BmgBI	CACGTC	1 cut(s)	1579
BmiI	GGNNCC	1 cut(s)	1340
BmrFI	CCNGG	3 cut(s)	414, 1363, 1734
BmsI	GCATC	7 cut(s)	319, 492, 562, 585, 958, 1457, 1551
BpiI	GAAGAC	1 cut(s)	1014
BpmI	CTGGAG	1 cut(s)	1326
Bpu10I	CCTNAGC	1 cut(s)	390
Bpu14I	TTCGAA	1 cut(s)	1392
BpuEI	CTTGAG	1 cut(s)	1451
BpuMI	CCSGG	1 cut(s)	1363
BsaAI	YACGTR	1 cut(s)	1301
BsaBI	GATNNNNATC	1 cut(s)	1068
BsaHI	GRCGYC	2 cut(s)	1005, 1683
BsaXI	ACNNNNNCTCC	2 cut(s)	863, 893
Bse3DI	GCAATG	2 cut(s)	1564, 1621
Bse8I	GATNNNNATC	1 cut(s)	1068
BseBI	CCWGG	2 cut(s)	414, 1734
BseGI	GGATG	7 cut(s)	334, 520, 667, 947, 1250, 1371, 1459
BseJI	GATNNNNATC	1 cut(s)	1068
BseMI	GCAATG	2 cut(s)	1564, 1621
BseMII	CTCAG	2 cut(s)	46, 312
BseRI	GAGGAG	1 cut(s)	1505
BseXI	GCAGC	5 cut(s)	817, 1365, 1417, 1579, 1618
BseYI	CCCAGC	1 cut(s)	233
BsgI	GTGCAG	1 cut(s)	1372
Bsh1236I	CGCG	2 cut(s)	274, 498
BsiHKAI	GWGCWC	1 cut(s)	1437
BsiHKCI	CYCGRG	1 cut(s)	1687
BsiSI	CCGG	1 cut(s)	1362
BsmAI	GTCTC	2 cut(s)	340, 1690
BsmBI	CGTCTC	1 cut(s)	1690
BsmI	GAATGC	3 cut(s)	113, 282, 414
BsoBI	CYCGRG	1 cut(s)	1687
Bsp119I	TTCGAA	1 cut(s)	1392
Bsp1286I	GDGCHC	2 cut(s)	1341, 1437
Bsp1407I	TGTACA	1 cut(s)	246
Bsp143I	GATC	6 cut(s)	172, 258, 351, 1063, 1069, 1609
Bsp68I	TCGCGA	1 cut(s)	498
BspACI	CCGC	9 cut(s)	15, 144, 487, 521, 1053, 1097, 1408, 1470, 1619
BspCNI	CTCAG	2 cut(s)	45, 313
BspFNI	CGCG	2 cut(s)	274, 498
BspLI	GGNNCC	1 cut(s)	1340
BspT104I	TTCGAA	1 cut(s)	1392
BsrBI	CCGCTC	1 cut(s)	487
BsrDI	GCAATG	2 cut(s)	1564, 1621
BsrGI	TGTACA	1 cut(s)	246
BssMI	GATC	6 cut(s)	172, 258, 351, 1063, 1069, 1609
BssNAI	GTATAC	1 cut(s)	1155
BssNI	GRCGYC	2 cut(s)	1005, 1683
Bst1107I	GTATAC	1 cut(s)	1155
Bst2UI	CCWGG	2 cut(s)	414, 1734
Bst4CI	ACNGT	9 cut(s)	45, 253, 306, 956, 1259, 1531, 1647, 1723, 1742
Bst6I	CTCTTC	1 cut(s)	556
BstACI	GRCGYC	2 cut(s)	1005, 1683
BstAUI	TGTACA	1 cut(s)	246
BstBAI	YACGTR	1 cut(s)	1301
BstBI	TTCGAA	1 cut(s)	1392
BstC8I	GCNNGC	7 cut(s)	205, 284, 863, 902, 1351, 1518, 1555
BstDEI	CTNAG	7 cut(s)	5, 32, 321, 390, 576, 1459, 1752
BstF5I	GGATG	7 cut(s)	334, 520, 667, 947, 1250, 1371, 1459
BstFNI	CGCG	2 cut(s)	274, 498
BstH2I	RGCGCY	1 cut(s)	1554
BstHHI	GCGC	4 cut(s)	274, 282, 1252, 1553
BstKTI	GATC	6 cut(s)	175, 261, 354, 1066, 1072, 1612
BstMAI	GTCTC	2 cut(s)	340, 1690
BstMBI	GATC	6 cut(s)	172, 258, 351, 1063, 1069, 1609
BstMWI	GCNNNNNNNGC	1 cut(s)	1589
BstNI	CCWGG	2 cut(s)	414, 1734
BstNSI	RCATGY	4 cut(s)	994, 1270, 1446, 1510
BstSCI	CCNGG	3 cut(s)	412, 1361, 1732
BstUI	CGCG	2 cut(s)	274, 498
BstV1I	GCAGC	5 cut(s)	817, 1365, 1417, 1579, 1618
BstV2I	GAAGAC	1 cut(s)	1014
BstX2I	RGATCY	2 cut(s)	1063, 1609
BstYI	RGATCY	2 cut(s)	1063, 1609
BstZ17I	GTATAC	1 cut(s)	1155
BsuI	GTATCC	1 cut(s)	539
BtrI	CACGTC	1 cut(s)	1579
BtsCI	GGATG	7 cut(s)	334, 520, 667, 947, 1250, 1371, 1459
BtsI	GCAGTG	2 cut(s)	161, 1633
BtsIMutI	CAGTG	2 cut(s)	161, 1633
BtuMI	TCGCGA	1 cut(s)	498
Cac8I	GCNNGC	7 cut(s)	205, 284, 863, 902, 1351, 1518, 1555
CaiI	CAGNNNCTG	1 cut(s)	746
CfoI	GCGC	4 cut(s)	274, 282, 1252, 1553
CseI	GACGC	2 cut(s)	994, 1392
CsiI	ACCWGGT	1 cut(s)	1732
Csp6I	GTAC	3 cut(s)	247, 808, 880
CviAII	CATG	7 cut(s)	542, 785, 991, 1224, 1267, 1443, 1507
CviQI	GTAC	3 cut(s)	247, 808, 880
DdeI	CTNAG	7 cut(s)	5, 32, 321, 390, 576, 1459, 1752
DpnI	GATC	6 cut(s)	174, 260, 353, 1065, 1071, 1611
DpnII	GATC	6 cut(s)	172, 258, 351, 1063, 1069, 1609
Eam1104I	CTCTTC	1 cut(s)	556
EarI	CTCTTC	1 cut(s)	556
Eco24I	GRGCYC	1 cut(s)	1341
Eco57I	CTGAAG	1 cut(s)	535
Eco88I	CYCGRG	1 cut(s)	1687
EcoRI	GAATTC	5 cut(s)	343, 529, 874, 1042, 1692
EcoRII	CCWGG	2 cut(s)	412, 1732
EcoT22I	ATGCAT	2 cut(s)	600, 1566
EcoT38I	GRGCYC	1 cut(s)	1341
Esp3I	CGTCTC	1 cut(s)	1690
FaeI	CATG	7 cut(s)	545, 788, 994, 1227, 1270, 1446, 1510
FatI	CATG	7 cut(s)	541, 784, 990, 1223, 1266, 1442, 1506
FauI	CCCGC	2 cut(s)	22, 1626
FbaI	TGATCA	3 cut(s)	172, 258, 351
FblI	GTMKAC	1 cut(s)	1154
Fnu4HI	GCNGC	5 cut(s)	831, 1354, 1406, 1593, 1632
FokI	GGATG	7 cut(s)	341, 527, 674, 954, 1257, 1378, 1466
FriOI	GRGCYC	1 cut(s)	1341
Fsp4HI	GCNGC	5 cut(s)	831, 1354, 1406, 1593, 1632
FspBI	CTAG	3 cut(s)	194, 1032, 1106
FspI	TGCGCA	2 cut(s)	281, 1251
GlaI	GCGC	4 cut(s)	273, 281, 1251, 1552
GluI	GCNGC	5 cut(s)	831, 1354, 1406, 1593, 1632
GsaI	CCCAGC	1 cut(s)	237
GsuI	CTGGAG	1 cut(s)	1326
HaeII	RGCGCY	1 cut(s)	1554
HapII	CCGG	1 cut(s)	1362
HgaI	GACGC	2 cut(s)	994, 1392
HhaI	GCGC	4 cut(s)	274, 282, 1252, 1553
Hin1I	GRCGYC	2 cut(s)	1005, 1683
Hin1II	CATG	7 cut(s)	545, 788, 994, 1227, 1270, 1446, 1510
Hin6I	GCGC	4 cut(s)	272, 280, 1250, 1551
HinP1I	GCGC	4 cut(s)	272, 280, 1250, 1551
HincII	GTYRAC	1 cut(s)	959
HindII	GTYRAC	1 cut(s)	959
HindIII	AAGCTT	1 cut(s)	666
HinfI	GANTC	5 cut(s)	453, 538, 781, 1084, 1200
HpaII	CCGG	1 cut(s)	1362
HphI	GGTGA	6 cut(s)	167, 479, 748, 1217, 1435, 1484
Hpy166II	GTNNAC	5 cut(s)	249, 435, 621, 959, 1155
Hpy188I	TCNGA	7 cut(s)	35, 96, 106, 172, 780, 792, 1244
Hpy188III	TCNNGA	9 cut(s)	194, 497, 683, 985, 1067, 1613, 1687, 1689, 1697
Hpy8I	GTNNAC	5 cut(s)	249, 435, 621, 959, 1155
Hpy99I	CGWCG	4 cut(s)	442, 821, 1580, 1685
HpyAV	CCTTC	2 cut(s)	319, 1019
HpyCH4III	ACNGT	9 cut(s)	45, 253, 306, 956, 1259, 1531, 1647, 1723, 1742
HpyCH4IV	ACGT	4 cut(s)	885, 1300, 1578, 1683
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1589
HpyF3I	CTNAG	7 cut(s)	5, 32, 321, 390, 576, 1459, 1752
HpySE526I	ACGT	4 cut(s)	885, 1300, 1578, 1683
Hsp92I	GRCGYC	2 cut(s)	1005, 1683
Hsp92II	CATG	7 cut(s)	545, 788, 994, 1227, 1270, 1446, 1510
HspAI	GCGC	4 cut(s)	272, 280, 1250, 1551
Ksp22I	TGATCA	3 cut(s)	172, 258, 351
Kzo9I	GATC	6 cut(s)	172, 258, 351, 1063, 1069, 1609
LmnI	GCTCC	5 cut(s)	77, 394, 1344, 1492, 1677
Lsp1109I	GCAGC	5 cut(s)	817, 1365, 1417, 1579, 1618
LweI	GCATC	7 cut(s)	319, 492, 562, 585, 958, 1457, 1551
MabI	ACCWGGT	1 cut(s)	1732
MaeI	CTAG	3 cut(s)	194, 1032, 1106
MaeII	ACGT	4 cut(s)	885, 1300, 1578, 1683
MaeIII	GTNAC	4 cut(s)	736, 1368, 1736, 1747
MalI	GATC	6 cut(s)	174, 260, 353, 1065, 1071, 1611
MbiI	CCGCTC	1 cut(s)	487
MboI	GATC	6 cut(s)	172, 258, 351, 1063, 1069, 1609
MboII	GAAGA	7 cut(s)	573, 581, 977, 1014, 1493, 1619, 1714
MflI	RGATCY	2 cut(s)	1063, 1609
MhlI	GDGCHC	2 cut(s)	1341, 1437
MmeI	TCCRAC	2 cut(s)	1222, 1458
MnlI	CCTC	8 cut(s)	41, 49, 308, 504, 648, 969, 1414, 1483
Mph1103I	ATGCAT	2 cut(s)	600, 1566
MroXI	GAANNNNTTC	1 cut(s)	452
MseI	TTAA	4 cut(s)	1101, 1194, 1287, 1500
MslI	CAYNNNNRTG	7 cut(s)	254, 727, 909, 966, 1260, 1511, 1626
MspA1I	CMGCKG	2 cut(s)	1097, 1408
MspI	CCGG	1 cut(s)	1362
MspR9I	CCNGG	3 cut(s)	414, 1363, 1734
Mva1269I	GAATGC	3 cut(s)	113, 282, 414
MvaI	CCWGG	2 cut(s)	414, 1734
MvnI	CGCG	2 cut(s)	274, 498
MwoI	GCNNNNNNNGC	1 cut(s)	1589
NciI	CCSGG	1 cut(s)	1363
NdeII	GATC	6 cut(s)	172, 258, 351, 1063, 1069, 1609
NlaIII	CATG	7 cut(s)	545, 788, 994, 1227, 1270, 1446, 1510
NlaIV	GGNNCC	1 cut(s)	1340
NmeAIII	GCCGAG	1 cut(s)	233
NmuCI	GTSAC	1 cut(s)	736
NruI	TCGCGA	1 cut(s)	498
NsbI	TGCGCA	2 cut(s)	281, 1251
NsiI	ATGCAT	2 cut(s)	600, 1566
NspI	RCATGY	4 cut(s)	994, 1270, 1446, 1510
NspV	TTCGAA	1 cut(s)	1392
OliI	CACNNNNGTG	2 cut(s)	727, 1260
PaeR7I	CTCGAG	1 cut(s)	1687
PcsI	WCGNNNNNNNCGW	3 cut(s)	437, 623, 891
PctI	GAATGC	3 cut(s)	113, 282, 414
PdmI	GAANNNNTTC	1 cut(s)	452
PfeI	GAWTC	5 cut(s)	453, 538, 781, 1084, 1200
PfoI	TCCNGGA	1 cut(s)	1361
PkrI	GCNGC	5 cut(s)	832, 1355, 1407, 1594, 1633
Ppu21I	YACGTR	1 cut(s)	1301
PsiI	TTATAA	1 cut(s)	842
Psp1406I	AACGTT	1 cut(s)	885
Psp6I	CCWGG	2 cut(s)	412, 1732
PspFI	CCCAGC	1 cut(s)	233
PspGI	CCWGG	2 cut(s)	412, 1732
PspN4I	GGNNCC	1 cut(s)	1340
PstNI	CAGNNNCTG	1 cut(s)	746
PsuI	RGATCY	2 cut(s)	1063, 1609
RruI	TCGCGA	1 cut(s)	498
RsaI	GTAC	3 cut(s)	248, 809, 881
RsaNI	GTAC	3 cut(s)	247, 808, 880
RseI	CAYNNNNRTG	7 cut(s)	254, 727, 909, 966, 1260, 1511, 1626
SaqAI	TTAA	4 cut(s)	1101, 1194, 1287, 1500
SatI	GCNGC	5 cut(s)	831, 1354, 1406, 1593, 1632
Sau3AI	GATC	6 cut(s)	172, 258, 351, 1063, 1069, 1609
ScrFI	CCNGG	3 cut(s)	414, 1363, 1734
SduI	GDGCHC	2 cut(s)	1341, 1437
SexAI	ACCWGGT	1 cut(s)	1732
SfaNI	GCATC	7 cut(s)	319, 492, 562, 585, 958, 1457, 1551
Sfr274I	CTCGAG	1 cut(s)	1687
SfuI	TTCGAA	1 cut(s)	1392
SlaI	CTCGAG	1 cut(s)	1687
SmiMI	CAYNNNNRTG	7 cut(s)	254, 727, 909, 966, 1260, 1511, 1626
SmlI	CTYRAG	2 cut(s)	1430, 1687
SmoI	CTYRAG	2 cut(s)	1430, 1687
SpeI	ACTAGT	1 cut(s)	1031
SsiI	CCGC	9 cut(s)	15, 144, 487, 521, 1053, 1097, 1408, 1470, 1619
SspMI	CTAG	3 cut(s)	194, 1032, 1106
StyD4I	CCNGG	3 cut(s)	412, 1361, 1732
TaaI	ACNGT	9 cut(s)	45, 253, 306, 956, 1259, 1531, 1647, 1723, 1742
TaiI	ACGT	4 cut(s)	888, 1303, 1581, 1686
TatI	WGTACW	1 cut(s)	246
TfiI	GAWTC	5 cut(s)	453, 538, 781, 1084, 1200
Tru1I	TTAA	4 cut(s)	1101, 1194, 1287, 1500
Tru9I	TTAA	4 cut(s)	1101, 1194, 1287, 1500
TscAI	CASTG	2 cut(s)	168, 1633
TseFI	GTSAC	1 cut(s)	736
TseI	GCWGC	5 cut(s)	830, 1353, 1405, 1592, 1631
Tsp45I	GTSAC	1 cut(s)	736
TspDTI	ATGAA	9 cut(s)	140, 234, 461, 530, 678, 773, 825, 1335, 1721
TspGWI	ACGGA	1 cut(s)	674
TspRI	CASTG	2 cut(s)	168, 1633
XapI	RAATTY	7 cut(s)	343, 529, 751, 874, 1042, 1651, 1692
XbaI	TCTAGA	1 cut(s)	193
XceI	RCATGY	4 cut(s)	994, 1270, 1446, 1510
XhoI	CTCGAG	1 cut(s)	1687
XmiI	GTMKAC	1 cut(s)	1154
XmnI	GAANNNNTTC	1 cut(s)	452
XspI	CTAG	3 cut(s)	194, 1032, 1106
ZraI	GACGTC	1 cut(s)	1684
Zsp2I	ATGCAT	2 cut(s)	600, 1566

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.