Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0013048

Physical Location & Seq

Genomic Coordinates Forward (+)

8668690 .. 8672343

Gene Structure 3654 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG094400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1758 bp

ATGCTTAGAGCTCCCGCCAGTTTTCGAAACCTTAGAGCATCCCATTTTTCACTCTCATCCTCTGTTTCAGGTTCTAATTTCCACAACAATCTCACAGAGCTCTCCGAATGCTTGGTGGGTTTCATGAATTACACCAAACTGAGTGCCCCATCTTACAAGTCACTCCTCTCCGATCACCTCAAAAACCATAGACTAGATGAAGCTATCCTGGTTTTCAATCGAATCCCTTTTCCTGGTGTCGATACATACACCAAATTGATAACGGGGTTTTCGCGAAGGCACAGGCTTGATGATGCCCTGAAGCTGTTCTACGAAATGCCTGAGAGAGATGTGGTCTCTTGGAATGCGATGATCAAAGGATGTTTGGATTGCGGGGATTTGGGCAAGGCTAAGGAGCTGTTTGATGGTATGCCGGAAAAGAGTGTCGTGTCGTGGACGACGATGATGAATGGGCACTTGCAGGTTGGTGAAGTTGGGATGGCAGAGTGCTTGTTTCGGAAAATGCCCGCGAGGGATGTGGCTGCGTGGAACTCGATGATTCATGGATATTTTAGCTATGGAAGAGTGGGAGATGCTAAGAAGTTGTTTGAGGTGATGCCTGGGAAGAATGCCATTTCGTGGACTTCGATGATTGCTGGGCTTGACCAGAATGGGAGGAGTGAGGAAGCTTTGGTAGTTTTCGGGGAGATGGTGGCGTCTGGTGTACAACCCACTTTGACCACATTTGGGTGTGTGGTGACAGCTTGTGCAAATTTGGGGAGTTTAGATTTAGGTGTTCTGGTTCATGGTCAGATTGTCAAGTTAGGGTACTGCTTTGATGAGTTCTTAGCTGCTTCACTTATAACACTTTATGCAAACTGCAAGAAAATTGAGAATTCTCACAAGGTGTTCAAGGAGAGTGGGCATAAAAATGTGGTGGTATGGACGGCTCTTTTAACAGGATGTGGATCAAATTCTAAACACGAAGATGCATTAATGGTTTTCAGGGATATGATGATCTCAGGAGTCATCCCCAATCAATCTTCTTTCACTAGTGCTTTGAATTCATGTTTGGGATTGGAAGATCTGCGTAGGGGAAAGGAGATTCATGCTGCAACTGTTAAGCTGGGTTTTGAAACTGATGCCTTTGTGGGTAATTCTCTTATTGTCTTGTATGCCAAATGTGGAAGTATAAATGATGGAGTGGCTATATTTAAGAGAATTGGTGAGAAGAACATTGTCTCATGGAATTCAACCGTCATTGGATGCGCACAACACGGTTGTGGCAAGTGGGCTTTGGCTCTCTTCAACCAAATGTTACGAGCAGGTGTAGACCCCGATGAAATTACATTCACTGGGTTGCTCTCTGCATGTAGCCATTCTGGGATGTTGCAGAAAGCAAGAGGCTTTTTCAAAGTTTTGTCTCAGACTAAATGTATTGAGGTCAAAATTGAGCACTATACATGTATGGTGGATGTCTTGGGACGATTTGGTGAATTGGAAGAAGCGGAGGAGATGATTAGAAACATGCCTGTTCAAGAAACTAAGATGGCATGGCTAACTTTACTTGGTGCTTGTAGGATGCATTCCAATTTGGATGTGGCTGAAAGAGCAGCAAAGAGCATTTTCGATATAGAACCGAACTGTAGTGCTGCTTATATTTTATTGTCCAATATATATGCTTCTGCAAATAGATGGAGTGACGTAAGCAGAATTCGAGAGAGGATGAAGTCAGGTGGAACTGTAAAACAACCCGGTTCCAGTTGGTTTACTCTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

585

Amino Acids

64.47

Weight (kDa)

8.03

Isoelectric Point (pI)

41.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	109 - 142	2.9e-06	PPR repeat family
PPR	PF01535	112 - 141	2.9e-06	PPR repeat
PPR_2	PF13041	203 - 251	8e-09	PPR repeat family
PPR_2	PF13041	303 - 350	4.1e-09	PPR repeat family
PPR_2	PF13041	404 - 452	9.2e-10	PPR repeat family
E_motif	PF20431	522 - 582	3.6e-19	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013048)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46460
fragaria_vesca	FvH4_5g29861 FvH4_5g29861
malus_domestica	MD05G1292000.v1.1
prunus_persica	Prupe.4G073400_v2.0.a1
pyrus_communis	pycom05g26840 pycom10g22400
rosa_chinensis	RchiOBHm_Chr5g0012881
rosa_laevigata	RLG00000031964
rosa_multiflora	Rmu_co8223558.1_g000001 Rmu_sc0010496.1_g000006
rosa_roxburghii	Rroxscaffold_1G00063720
rosa_rugosa	Rorug05G0005000
rosa_samantha	Rh5AG098900 Rh5BG095700 Rh5CG107900 Rh5DG094400
rosa_wichuraiana	Rw5G008650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	842
AarI	CACCTGC	1 cut(s)	1295
Acc16I	TGCGCA	1 cut(s)	1249
Acc36I	ACCTGC	2 cut(s)	451, 1295
AccB7I	CCANNNNNTGG	1 cut(s)	618
AccI	GTMKAC	1 cut(s)	1311
AccII	CGCG	2 cut(s)	274, 509
AciI	CCGC	4 cut(s)	15, 372, 507, 1487
AclWI	GGATC	1 cut(s)	955
AcsI	RAATTY	6 cut(s)	751, 874, 952, 1042, 1228, 1692
AcuI	CTGAAG	1 cut(s)	320
AcyI	GRCGYC	1 cut(s)	695
AdeI	CACNNNGTG	1 cut(s)	886
AfaI	GTAC	2 cut(s)	705, 809
AfiI	CCNNNNNNNGG	3 cut(s)	233, 618, 726
AflIII	ACRYGT	1 cut(s)	1442
AgsI	TTSAA	8 cut(s)	217, 892, 1042, 1115, 1233, 1288, 1393, 1517
AhlI	ACTAGT	1 cut(s)	1031
AjnI	CCWGG	3 cut(s)	207, 232, 598
AjuI	GAANNNNNNNTTGG	2 cut(s)	1034, 1066
AleI	CACNNNNGTG	1 cut(s)	1260
Alw21I	GWGCWC	3 cut(s)	13, 102, 1437
Alw26I	GTCTC	3 cut(s)	340, 1225, 1407
AlwI	GGATC	1 cut(s)	955
ApeKI	GCWGC	5 cut(s)	521, 830, 1091, 1592, 1631
ApoI	RAATTY	6 cut(s)	751, 874, 952, 1042, 1228, 1692
AseI	ATTAAT	1 cut(s)	974
Asp700I	GAANNNNTTC	1 cut(s)	305
AspLEI	GCGC	1 cut(s)	1250
AsuC2I	CCSGG	1 cut(s)	1734
AsuHPI	GGTGA	6 cut(s)	167, 479, 604, 748, 1217, 1484
AsuII	TTCGAA	1 cut(s)	25
BaeGI	GKGCMC	2 cut(s)	148, 456
BanII	GRGCYC	2 cut(s)	13, 102
BarI	GAAGNNNNNNTAC	2 cut(s)	293, 325
Bbv12I	GWGCWC	3 cut(s)	13, 102, 1437
BbvI	GCAGC	5 cut(s)	508, 817, 1078, 1604, 1618
BccI	CCATC	7 cut(s)	157, 398, 472, 682, 1172, 1522, 1668
BceAI	ACGGC	1 cut(s)	942
BciT130I	CCWGG	3 cut(s)	209, 234, 600
BclI	TGATCA	1 cut(s)	351
BcnI	CCSGG	1 cut(s)	1734
BcoDI	GTCTC	3 cut(s)	340, 1225, 1407
BcuI	ACTAGT	1 cut(s)	1031
BfaI	CTAG	2 cut(s)	194, 1032
BfmI	CTRYAG	2 cut(s)	1624, 1754
BfuAI	ACCTGC	2 cut(s)	451, 1295
BglII	AGATCT	1 cut(s)	1063
BisI	GCNGC	5 cut(s)	522, 831, 1092, 1593, 1632
BlsI	GCNGC	5 cut(s)	523, 832, 1093, 1594, 1633
Bme1390I	CCNGG	4 cut(s)	209, 234, 600, 1734
BmiI	GGNNCC	1 cut(s)	1738
BmrFI	CCNGG	4 cut(s)	209, 234, 600, 1734
BmrI	ACTGGG	1 cut(s)	1344
BmsI	GCATC	8 cut(s)	47, 283, 562, 585, 958, 1111, 1235, 1551
BmuI	ACTGGG	1 cut(s)	1344
Bpu10I	CCTNAGC	1 cut(s)	390
Bpu14I	TTCGAA	1 cut(s)	25
BpuMI	CCSGG	1 cut(s)	1734
BsaBI	GATNNNNATC	1 cut(s)	946
BsaHI	GRCGYC	1 cut(s)	695
BsaI	GGTCTC	1 cut(s)	340
BsaJI	CCNNGG	1 cut(s)	599
Bsc4I	CCNNNNNNNGG	3 cut(s)	233, 618, 726
Bse1I	ACTGG	3 cut(s)	18, 1339, 1740
Bse8I	GATNNNNATC	1 cut(s)	946
BseBI	CCWGG	3 cut(s)	209, 234, 600
BseDI	CCNNGG	1 cut(s)	599
BseJI	GATNNNNATC	1 cut(s)	946
BseLI	CCNNNNNNNGG	3 cut(s)	233, 618, 726
BseMII	CTCAG	4 cut(s)	131, 312, 1014, 1418
BseNI	ACTGG	3 cut(s)	18, 1339, 1740
BseRI	GAGGAG	3 cut(s)	155, 670, 1505
BseSI	GKGCMC	2 cut(s)	148, 456
BseXI	GCAGC	5 cut(s)	508, 817, 1078, 1604, 1618
BseYI	CCCAGC	2 cut(s)	635, 1105
Bsh1236I	CGCG	2 cut(s)	274, 509
BsiHKAI	GWGCWC	3 cut(s)	13, 102, 1437
BsiSI	CCGG	2 cut(s)	413, 1734
BslFI	GGGAC	1 cut(s)	1476
BslI	CCNNNNNNNGG	3 cut(s)	233, 618, 726
BsmAI	GTCTC	3 cut(s)	340, 1225, 1407
BsmFI	GGGAC	1 cut(s)	1476
BsmI	GAATGC	4 cut(s)	113, 349, 613, 1564
Bso31I	GGTCTC	1 cut(s)	340
Bsp119I	TTCGAA	1 cut(s)	25
Bsp1286I	GDGCHC	5 cut(s)	13, 102, 148, 456, 1437
Bsp1407I	TGTACA	1 cut(s)	703
Bsp143I	GATC	5 cut(s)	172, 351, 947, 996, 1063
Bsp68I	TCGCGA	1 cut(s)	274
BspACI	CCGC	4 cut(s)	15, 372, 507, 1487
BspCNI	CTCAG	4 cut(s)	132, 313, 1013, 1417
BspFNI	CGCG	2 cut(s)	274, 509
BspHI	TCATGA	1 cut(s)	123
BspLI	GGNNCC	1 cut(s)	1738
BspMI	ACCTGC	2 cut(s)	451, 1295
BspPI	GGATC	1 cut(s)	955
BspT104I	TTCGAA	1 cut(s)	25
BspTNI	GGTCTC	1 cut(s)	340
BsrGI	TGTACA	1 cut(s)	703
BsrI	ACTGG	3 cut(s)	18, 1339, 1740
BssECI	CCNNGG	1 cut(s)	599
BssMI	GATC	5 cut(s)	172, 351, 947, 996, 1063
BssNI	GRCGYC	1 cut(s)	695
Bst2UI	CCWGG	3 cut(s)	209, 234, 600
Bst4CI	ACNGT	5 cut(s)	1099, 1237, 1259, 1625, 1723
Bst6I	CTCTTC	2 cut(s)	556, 1289
BstACI	GRCGYC	1 cut(s)	695
BstAUI	TGTACA	1 cut(s)	703
BstBI	TTCGAA	1 cut(s)	25
BstC8I	GCNNGC	1 cut(s)	507
BstFNI	CGCG	2 cut(s)	274, 509
BstHHI	GCGC	1 cut(s)	1250
BstKTI	GATC	5 cut(s)	175, 354, 950, 999, 1066
BstMAI	GTCTC	3 cut(s)	340, 1225, 1407
BstMBI	GATC	5 cut(s)	172, 351, 947, 996, 1063
BstMWI	GCNNNNNNNGC	1 cut(s)	1589
BstNI	CCWGG	3 cut(s)	209, 234, 600
BstNSI	RCATGY	3 cut(s)	1353, 1446, 1510
BstSCI	CCNGG	4 cut(s)	207, 232, 598, 1732
BstSFI	CTRYAG	2 cut(s)	1624, 1754
BstSLI	GKGCMC	2 cut(s)	148, 456
BstUI	CGCG	2 cut(s)	274, 509
BstV1I	GCAGC	5 cut(s)	508, 817, 1078, 1604, 1618
BstX2I	RGATCY	1 cut(s)	1063
BstYI	RGATCY	1 cut(s)	1063
BtgZI	GCGATG	1 cut(s)	362
BtsIMutI	CAGTG	1 cut(s)	1332
BtuMI	TCGCGA	1 cut(s)	274
BveI	ACCTGC	2 cut(s)	451, 1295
Cac8I	GCNNGC	1 cut(s)	507
CciI	TCATGA	1 cut(s)	123
CfoI	GCGC	1 cut(s)	1250
CseI	GACGC	1 cut(s)	684
Csp6I	GTAC	2 cut(s)	704, 808
CspCI	CAANNNNNGTGG	2 cut(s)	880, 915
CviQI	GTAC	2 cut(s)	704, 808
DpnI	GATC	5 cut(s)	174, 353, 949, 998, 1065
DpnII	GATC	5 cut(s)	172, 351, 947, 996, 1063
DraIII	CACNNNGTG	1 cut(s)	886
Eam1104I	CTCTTC	2 cut(s)	556, 1289
EarI	CTCTTC	2 cut(s)	556, 1289
Ecl136II	GAGCTC	2 cut(s)	11, 100
Eco24I	GRGCYC	2 cut(s)	13, 102
Eco31I	GGTCTC	1 cut(s)	340
Eco53kI	GAGCTC	2 cut(s)	11, 100
Eco57I	CTGAAG	1 cut(s)	320
EcoICRI	GAGCTC	2 cut(s)	11, 100
EcoRI	GAATTC	4 cut(s)	874, 1042, 1228, 1692
EcoRII	CCWGG	3 cut(s)	207, 232, 598
EcoT22I	ATGCAT	2 cut(s)	973, 1566
EcoT38I	GRGCYC	2 cut(s)	13, 102
FaqI	GGGAC	1 cut(s)	1476
FauI	CCCGC	3 cut(s)	22, 365, 514
FbaI	TGATCA	1 cut(s)	351
FblI	GTMKAC	1 cut(s)	1311
Fnu4HI	GCNGC	5 cut(s)	522, 831, 1092, 1593, 1632
FriOI	GRGCYC	2 cut(s)	13, 102
Fsp4HI	GCNGC	5 cut(s)	522, 831, 1092, 1593, 1632
FspAI	RTGCGCAY	1 cut(s)	1249
FspBI	CTAG	2 cut(s)	194, 1032
FspI	TGCGCA	1 cut(s)	1249
GlaI	GCGC	1 cut(s)	1249
GluI	GCNGC	5 cut(s)	522, 831, 1092, 1593, 1632
GsaI	CCCAGC	2 cut(s)	639, 1109
HapII	CCGG	2 cut(s)	413, 1734
HgaI	GACGC	1 cut(s)	684
HhaI	GCGC	1 cut(s)	1250
Hin1I	GRCGYC	1 cut(s)	695
Hin6I	GCGC	1 cut(s)	1248
HinP1I	GCGC	1 cut(s)	1248
HindIII	AAGCTT	1 cut(s)	666
HinfI	GANTC	4 cut(s)	222, 538, 1005, 1084
HpaII	CCGG	2 cut(s)	413, 1734
HphI	GGTGA	6 cut(s)	167, 479, 604, 748, 1217, 1484
Hpy166II	GTNNAC	5 cut(s)	435, 621, 704, 1312, 1749
Hpy188I	TCNGA	5 cut(s)	106, 172, 498, 792, 1407
Hpy188III	TCNNGA	5 cut(s)	124, 273, 1002, 1517, 1697
Hpy8I	GTNNAC	5 cut(s)	435, 621, 704, 1312, 1749
Hpy99I	CGWCG	1 cut(s)	442
HpyAV	CCTTC	1 cut(s)	270
HpyCH4III	ACNGT	5 cut(s)	1099, 1237, 1259, 1625, 1723
HpyCH4IV	ACGT	1 cut(s)	1683
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1589
HpySE526I	ACGT	1 cut(s)	1683
Hsp92I	GRCGYC	1 cut(s)	695
HspAI	GCGC	1 cut(s)	1248
Ksp22I	TGATCA	1 cut(s)	351
Kzo9I	GATC	5 cut(s)	172, 351, 947, 996, 1063
LmnI	GCTCC	2 cut(s)	16, 394
Lsp1109I	GCAGC	5 cut(s)	508, 817, 1078, 1604, 1618
LweI	GCATC	8 cut(s)	47, 283, 562, 585, 958, 1111, 1235, 1551
MaeI	CTAG	2 cut(s)	194, 1032
MaeII	ACGT	1 cut(s)	1683
MaeIII	GTNAC	4 cut(s)	159, 736, 1296, 1679
MalI	GATC	5 cut(s)	174, 353, 949, 998, 1065
MboI	GATC	5 cut(s)	172, 351, 947, 996, 1063
MboII	GAAGA	8 cut(s)	573, 616, 977, 1014, 1073, 1222, 1276, 1493
MflI	RGATCY	1 cut(s)	1063
MhlI	GDGCHC	5 cut(s)	13, 102, 148, 456, 1437
MlyI	GAGTC	1 cut(s)	1014
Mph1103I	ATGCAT	2 cut(s)	973, 1566
MroXI	GAANNNNTTC	1 cut(s)	305
MseI	TTAA	4 cut(s)	935, 974, 1101, 1194
MslI	CAYNNNNRTG	4 cut(s)	727, 909, 966, 1260
MspI	CCGG	2 cut(s)	413, 1734
MspR9I	CCNGG	4 cut(s)	209, 234, 600, 1734
Mva1269I	GAATGC	4 cut(s)	113, 349, 613, 1564
MvaI	CCWGG	3 cut(s)	209, 234, 600
MvnI	CGCG	2 cut(s)	274, 509
MwoI	GCNNNNNNNGC	1 cut(s)	1589
NciI	CCSGG	1 cut(s)	1734
NdeII	GATC	5 cut(s)	172, 351, 947, 996, 1063
NlaIV	GGNNCC	1 cut(s)	1738
NmuCI	GTSAC	3 cut(s)	159, 736, 1679
NruI	TCGCGA	1 cut(s)	274
NsbI	TGCGCA	1 cut(s)	1249
NsiI	ATGCAT	2 cut(s)	973, 1566
NspI	RCATGY	3 cut(s)	1353, 1446, 1510
NspV	TTCGAA	1 cut(s)	25
OliI	CACNNNNGTG	1 cut(s)	1260
PagI	TCATGA	1 cut(s)	123
PaqCI	CACCTGC	1 cut(s)	1295
PciI	ACATGT	1 cut(s)	1442
PcsI	WCGNNNNNNNCGW	2 cut(s)	437, 623
PctI	GAATGC	4 cut(s)	113, 349, 613, 1564
PdmI	GAANNNNTTC	1 cut(s)	305
PfeI	GAWTC	3 cut(s)	222, 538, 1084
PflMI	CCANNNNNTGG	1 cut(s)	618
PkrI	GCNGC	5 cut(s)	523, 832, 1093, 1594, 1633
PleI	GAGTC	1 cut(s)	1013
PpsI	GAGTC	1 cut(s)	1013
PscI	ACATGT	1 cut(s)	1442
PshBI	ATTAAT	1 cut(s)	974
PsiI	TTATAA	1 cut(s)	842
Psp124BI	GAGCTC	2 cut(s)	13, 102
Psp6I	CCWGG	3 cut(s)	207, 232, 598
PspFI	CCCAGC	2 cut(s)	635, 1105
PspGI	CCWGG	3 cut(s)	207, 232, 598
PspN4I	GGNNCC	1 cut(s)	1738
PsuI	RGATCY	1 cut(s)	1063
RruI	TCGCGA	1 cut(s)	274
RsaI	GTAC	2 cut(s)	705, 809
RsaNI	GTAC	2 cut(s)	704, 808
RseI	CAYNNNNRTG	4 cut(s)	727, 909, 966, 1260
SacI	GAGCTC	2 cut(s)	13, 102
SaqAI	TTAA	4 cut(s)	935, 974, 1101, 1194
SatI	GCNGC	5 cut(s)	522, 831, 1092, 1593, 1632
Sau3AI	GATC	5 cut(s)	172, 351, 947, 996, 1063
SchI	GAGTC	1 cut(s)	1014
ScrFI	CCNGG	4 cut(s)	209, 234, 600, 1734
SduI	GDGCHC	5 cut(s)	13, 102, 148, 456, 1437
SfaNI	GCATC	8 cut(s)	47, 283, 562, 585, 958, 1111, 1235, 1551
SfcI	CTRYAG	2 cut(s)	1624, 1754
SfuI	TTCGAA	1 cut(s)	25
SmiMI	CAYNNNNRTG	4 cut(s)	727, 909, 966, 1260
SpeI	ACTAGT	1 cut(s)	1031
SsiI	CCGC	4 cut(s)	15, 372, 507, 1487
SspMI	CTAG	2 cut(s)	194, 1032
SstI	GAGCTC	2 cut(s)	13, 102
StyD4I	CCNGG	4 cut(s)	207, 232, 598, 1732
TaaI	ACNGT	5 cut(s)	1099, 1237, 1259, 1625, 1723
TaiI	ACGT	1 cut(s)	1686
TaqI	TCGA	7 cut(s)	25, 220, 240, 533, 626, 1608, 1696
TatI	WGTACW	1 cut(s)	703
TfiI	GAWTC	3 cut(s)	222, 538, 1084
Tru1I	TTAA	4 cut(s)	935, 974, 1101, 1194
Tru9I	TTAA	4 cut(s)	935, 974, 1101, 1194
TscAI	CASTG	1 cut(s)	1339
TseFI	GTSAC	3 cut(s)	159, 736, 1679
TseI	GCWGC	5 cut(s)	521, 830, 1091, 1592, 1631
Tsp45I	GTSAC	3 cut(s)	159, 736, 1679
TspRI	CASTG	1 cut(s)	1339
Van91I	CCANNNNNTGG	1 cut(s)	618
VspI	ATTAAT	1 cut(s)	974
XapI	RAATTY	6 cut(s)	751, 874, 952, 1042, 1228, 1692
XceI	RCATGY	3 cut(s)	1353, 1446, 1510
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1576
XmiI	GTMKAC	1 cut(s)	1311
XmnI	GAANNNNTTC	1 cut(s)	305
XspI	CTAG	2 cut(s)	194, 1032
Zsp2I	ATGCAT	2 cut(s)	973, 1566

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.