Rroxscaffold_1G00063720

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0013048
Physical Location & Seq
Reverse (-)
85502445 .. 85504558
2114 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00063720.1

Sequence Viewer

Length: 1758 bp
ATGCTCAGAGTTCCCGCCAGTTTTCGAAACCTTAGAGCATCCCATTTTTCACTCTCATCCTCTGTTGCAGGTTCTAATTTCCACAACAATCTCACAGAGCTCTCCGAATGCTTGGTGGGTTTCATGAATTACACCAAACTGAGTGCCCCATCTTACAAGTCACTCCTCTCCGATCACCTCAAAAACCATAGACTAGATGAAGCTATCCTGGTTTTCAATAGAGTCCCTTTTCCTGGTGTTGATATATACACCAAAATGATAACTGGGTATGCGAGAAGGCACAGGCTTGATGATGCCCTGAAGCTGTTCTACGAAATGCCTGAGAGAGATGTGGTCTCTTGGAATGCTATGATCAAAGGGTGTTTGGATTGCGGGGATTTGAGTAAGGCTAAGGAGCTGTTTGATGGTATGCCGGAAAAGAGTGTCGTGTCGTGGACGACGATGATGAATGGGTACTTGCAGGTTGGTGAAGTTGAGATGGCAGAGTGCTTGTTTCGGAGAATGCCCGCGAGGGATGTGGCTGCGTGTAACTCGATGATTCATGGATATTTTAGCTATGGAAGAGTGGGAGATGCTAAGAAGTTGTTTGAGGTGATGCCTGGGAAGAATGCCATTTCGTGGACTTCGATGATTGCTGGGCTTGACCAGAATGGGAGGAGTGAGGAAGCTTTGGTTGTTTTCGGGGAGATGGTGGCGTCTGGTGTACAGCCCACTTTGACCACATTTGGGTGTGTGGTGACAGCTTGTGCAAATTTGGGGAGTTTAGATTTAGGTGTTCTGGTTCATGGTCAGATTGTCAAGTTAGGGTACTGCTTTGATGAGTTCTTAGCTGCTTCACTTATAACACTTTTTGCAAAGTGCAAGCAAATTGAGAATTCTCACAAGGTGTTCAAGGAGAGTGTGCATAAAAATGTGGTGGTATGGACGGCTCTTTTAACAGGATGTGGATCAAATTCTAAACACGAAGATGCATTAATGGTTTTCAGGGATATGATGATCTCAGGAGTCATACCCAATCAATCTTCTTTCACTAGTGCTTTGAATTCATGTTTGGGATTGGAAGATCTCCGTAGGGGAAAGGAGATTCATGCCGCAACTGTTAAGCTGGGTTTTGAAACTGATGCCTTTGTGGGTAATTCTCTTATTGTCTTGTATGCCAAATGTGGAAGTATAAATGATGGAGTGGCTATATTTAAGAGAATTCGTGAGAAAAATATTGTCTCATGGAATTCAACCATCATTGGATGCGCACAACACGGTCATGGCCAGTGGGCCTTGGCTCTCTTTAACCAAGTGTTACGAGCAGGTGTAGACCCCGATGAAATTACATTCACGGGGTTGCTCTCTGCATGTAGCCATTCTGGGATGTTGCAGAAAGCAAGAGGCTTTTTCAAAGTTTTGTCTCAGACTAAATGTATTGAGGTCAAAATTGAGCACTATACATCTATGGTGGATGTCTTGGGACGATTTGGTGAATTGGAAGAAGCGGAGGAGATGATTAGAAACATGCCTTTTCAAGAAACTAAGATGGCATGGCTAACTTTACTTGGTGCTTGTAGGATGCATTCCAATTTGGATGTGGCTGAAAGAGCAGCAAAGAGCATTTTCGATATAGAACCCAACTGTAGTGCTGCTTATATTTTATTGTCCAATATATATGCTTCCGCAAATAGATGGAGTGACGTAAGCAGAATTCGAGAGAGGATGAAGTTTGGTGGAACTGTAAAACAACCCGGTTCCAGTTGGTTTACTCTCTAG

Protein Analysis

585

Amino Acids

64.82

Weight (kDa)

7.83

Isoelectric Point (pI)

43.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 109 - 142 1.7e-06 PPR repeat family
PPR PF01535 112 - 141 1.1e-06 PPR repeat
PPR_2 PF13041 141 - 173 3.1e-06 PPR repeat family
PPR PF01535 143 - 172 1.7e-06 PPR repeat
PPR_2 PF13041 203 - 251 8e-09 PPR repeat family
PPR_2 PF13041 303 - 350 4.1e-09 PPR repeat family
PPR_2 PF13041 404 - 452 2.7e-09 PPR repeat family
E_motif PF20431 522 - 582 2.4e-18 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G46460
fragaria_vesca FvH4_5g29861 FvH4_5g29861
malus_domestica MD05G1292000.v1.1
prunus_persica Prupe.4G073400_v2.0.a1
pyrus_communis pycom05g26840 pycom10g22400
rosa_chinensis RchiOBHm_Chr5g0012881
rosa_laevigata RLG00000031964
rosa_multiflora Rmu_co8223558.1_g000001 Rmu_sc0010496.1_g000006
rosa_roxburghii Rroxscaffold_1G00063720
rosa_rugosa Rorug05G0005000
rosa_samantha Rh5AG098900 Rh5BG095700 Rh5CG107900 Rh5DG094400
rosa_wichuraiana Rw5G008650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 842
AarI CACCTGC 1 cut(s) 1295
Acc16I TGCGCA 1 cut(s) 1249
Acc36I ACCTGC 3 cut(s) 59, 451, 1295
AccB7I CCANNNNNTGG 1 cut(s) 618
AccI GTMKAC 1 cut(s) 1311
AccII CGCG 1 cut(s) 509
AciI CCGC 6 cut(s) 15, 372, 507, 1092, 1487, 1665
AclWI GGATC 1 cut(s) 955
AcoI YGGCCR 1 cut(s) 1264
AcsI RAATTY 7 cut(s) 751, 874, 952, 1042, 1200, 1228, 1692
AcuI CTGAAG 1 cut(s) 320
AcyI GRCGYC 1 cut(s) 695
AdeI CACNNNGTG 1 cut(s) 886
AfaI GTAC 3 cut(s) 455, 705, 809
AfiI CCNNNNNNNGG 3 cut(s) 233, 618, 726
AgsI TTSAA 7 cut(s) 217, 892, 1042, 1115, 1233, 1393, 1517
AhlI ACTAGT 1 cut(s) 1031
AjnI CCWGG 3 cut(s) 207, 232, 598
AjuI GAANNNNNNNTTGG 2 cut(s) 1034, 1066
AluBI AGCT 9 cut(s) 100, 203, 304, 397, 555, 668, 743, 830, 1105
AluI AGCT 9 cut(s) 100, 203, 304, 397, 555, 668, 743, 830, 1105
Alw21I GWGCWC 2 cut(s) 102, 1437
Alw26I GTCTC 3 cut(s) 340, 1225, 1407
AlwI GGATC 1 cut(s) 955
AoxI GGCC 2 cut(s) 1264, 1272
ApeKI GCWGC 4 cut(s) 521, 830, 1592, 1631
ApoI RAATTY 7 cut(s) 751, 874, 952, 1042, 1200, 1228, 1692
AseI ATTAAT 1 cut(s) 974
Asp700I GAANNNNTTC 1 cut(s) 305
AspLEI GCGC 1 cut(s) 1250
AspS9I GGNCC 1 cut(s) 1272
AsuC2I CCSGG 1 cut(s) 1734
AsuHPI GGTGA 5 cut(s) 167, 479, 604, 748, 1484
AsuII TTCGAA 1 cut(s) 25
BaeGI GKGCMC 1 cut(s) 148
BalI TGGCCA 1 cut(s) 1266
BanII GRGCYC 1 cut(s) 102
BarI GAAGNNNNNNTAC 2 cut(s) 293, 325
Bbv12I GWGCWC 2 cut(s) 102, 1437
BbvI GCAGC 4 cut(s) 508, 817, 1604, 1618
BccI CCATC 8 cut(s) 157, 398, 472, 682, 1172, 1244, 1522, 1668
BceAI ACGGC 1 cut(s) 942
BciT130I CCWGG 3 cut(s) 209, 234, 600
BclI TGATCA 1 cut(s) 351
BcnI CCSGG 1 cut(s) 1734
BcoDI GTCTC 3 cut(s) 340, 1225, 1407
BcuI ACTAGT 1 cut(s) 1031
BfaI CTAG 3 cut(s) 194, 1032, 1756
BfmI CTRYAG 1 cut(s) 1624
BfuAI ACCTGC 3 cut(s) 59, 451, 1295
BglII AGATCT 1 cut(s) 1063
BisI GCNGC 5 cut(s) 522, 831, 1092, 1593, 1632
BlsI GCNGC 5 cut(s) 523, 832, 1093, 1594, 1633
Bme1390I CCNGG 4 cut(s) 209, 234, 600, 1734
BmgT120I GGNCC 1 cut(s) 1272
BmiI GGNNCC 1 cut(s) 1738
BmrFI CCNGG 4 cut(s) 209, 234, 600, 1734
BmrI ACTGGG 1 cut(s) 273
BmsI GCATC 8 cut(s) 47, 283, 562, 585, 958, 1111, 1235, 1551
BmuI ACTGGG 1 cut(s) 273
Bpu10I CCTNAGC 1 cut(s) 390
Bpu14I TTCGAA 1 cut(s) 25
BpuMI CCSGG 1 cut(s) 1734
BsaBI GATNNNNATC 1 cut(s) 946
BsaHI GRCGYC 1 cut(s) 695
BsaI GGTCTC 1 cut(s) 340
BsaJI CCNNGG 2 cut(s) 599, 1275
Bsc4I CCNNNNNNNGG 3 cut(s) 233, 618, 726
Bse1I ACTGG 4 cut(s) 18, 268, 1267, 1740
Bse8I GATNNNNATC 1 cut(s) 946
BseBI CCWGG 3 cut(s) 209, 234, 600
BseDI CCNNGG 2 cut(s) 599, 1275
BseJI GATNNNNATC 1 cut(s) 946
BseLI CCNNNNNNNGG 3 cut(s) 233, 618, 726
BseMII CTCAG 5 cut(s) 19, 131, 312, 1014, 1418
BseNI ACTGG 4 cut(s) 18, 268, 1267, 1740
BseRI GAGGAG 3 cut(s) 155, 670, 1505
BseSI GKGCMC 1 cut(s) 148
BseXI GCAGC 4 cut(s) 508, 817, 1604, 1618
BseYI CCCAGC 2 cut(s) 635, 1105
Bsh1236I CGCG 1 cut(s) 509
BshFI GGCC 2 cut(s) 1266, 1274
BsiHKAI GWGCWC 2 cut(s) 102, 1437
BsiSI CCGG 2 cut(s) 413, 1734
BslFI GGGAC 2 cut(s) 209, 1476
BslI CCNNNNNNNGG 3 cut(s) 233, 618, 726
BsmAI GTCTC 3 cut(s) 340, 1225, 1407
BsmFI GGGAC 2 cut(s) 209, 1476
BsmI GAATGC 5 cut(s) 113, 349, 507, 613, 1564
BsnI GGCC 2 cut(s) 1266, 1274
Bso31I GGTCTC 1 cut(s) 340
Bsp119I TTCGAA 1 cut(s) 25
Bsp1286I GDGCHC 3 cut(s) 102, 148, 1437
Bsp1407I TGTACA 1 cut(s) 703
Bsp143I GATC 5 cut(s) 172, 351, 947, 996, 1063
BspACI CCGC 6 cut(s) 15, 372, 507, 1092, 1487, 1665
BspANI GGCC 2 cut(s) 1266, 1274
BspCNI CTCAG 5 cut(s) 18, 132, 313, 1013, 1417
BspFNI CGCG 1 cut(s) 509
BspHI TCATGA 1 cut(s) 123
BspLI GGNNCC 1 cut(s) 1738
BspMI ACCTGC 3 cut(s) 59, 451, 1295
BspPI GGATC 1 cut(s) 955
BspT104I TTCGAA 1 cut(s) 25
BspTNI GGTCTC 1 cut(s) 340
BsrGI TGTACA 1 cut(s) 703
BsrI ACTGG 4 cut(s) 18, 268, 1267, 1740
BssECI CCNNGG 2 cut(s) 599, 1275
BssMI GATC 5 cut(s) 172, 351, 947, 996, 1063
BssNI GRCGYC 1 cut(s) 695
BssT1I CCWWGG 1 cut(s) 1275
Bst2UI CCWGG 3 cut(s) 209, 234, 600
Bst4CI ACNGT 4 cut(s) 1099, 1259, 1625, 1723
Bst6I CTCTTC 1 cut(s) 556
BstACI GRCGYC 1 cut(s) 695
BstAUI TGTACA 1 cut(s) 703
BstBI TTCGAA 1 cut(s) 25
BstC8I GCNNGC 2 cut(s) 507, 863
BstFNI CGCG 1 cut(s) 509
BstHHI GCGC 1 cut(s) 1250
BstKTI GATC 5 cut(s) 175, 354, 950, 999, 1066
BstMAI GTCTC 3 cut(s) 340, 1225, 1407
BstMBI GATC 5 cut(s) 172, 351, 947, 996, 1063
BstMWI GCNNNNNNNGC 1 cut(s) 1589
BstNI CCWGG 3 cut(s) 209, 234, 600
BstNSI RCATGY 2 cut(s) 1353, 1510
BstSCI CCNGG 4 cut(s) 207, 232, 598, 1732
BstSFI CTRYAG 1 cut(s) 1624
BstSLI GKGCMC 1 cut(s) 148
BstUI CGCG 1 cut(s) 509
BstV1I GCAGC 4 cut(s) 508, 817, 1604, 1618
BstX2I RGATCY 1 cut(s) 1063
BstYI RGATCY 1 cut(s) 1063
BsuRI GGCC 2 cut(s) 1266, 1274
BtsIMutI CAGTG 1 cut(s) 1274
BveI ACCTGC 3 cut(s) 59, 451, 1295
Cac8I GCNNGC 2 cut(s) 507, 863
CciI TCATGA 1 cut(s) 123
CfoI GCGC 1 cut(s) 1250
Cfr13I GGNCC 1 cut(s) 1272
CseI GACGC 1 cut(s) 684
Csp6I GTAC 3 cut(s) 454, 704, 808
CviQI GTAC 3 cut(s) 454, 704, 808
DpnI GATC 5 cut(s) 174, 353, 949, 998, 1065
DpnII GATC 5 cut(s) 172, 351, 947, 996, 1063
DraIII CACNNNGTG 1 cut(s) 886
EaeI YGGCCR 1 cut(s) 1264
Eam1104I CTCTTC 1 cut(s) 556
EarI CTCTTC 1 cut(s) 556
Ecl136II GAGCTC 1 cut(s) 100
Eco130I CCWWGG 1 cut(s) 1275
Eco24I GRGCYC 1 cut(s) 102
Eco31I GGTCTC 1 cut(s) 340
Eco53kI GAGCTC 1 cut(s) 100
Eco57I CTGAAG 1 cut(s) 320
EcoICRI GAGCTC 1 cut(s) 100
EcoRI GAATTC 5 cut(s) 874, 1042, 1200, 1228, 1692
EcoRII CCWGG 3 cut(s) 207, 232, 598
EcoT14I CCWWGG 1 cut(s) 1275
EcoT22I ATGCAT 2 cut(s) 973, 1566
EcoT38I GRGCYC 1 cut(s) 102
ErhI CCWWGG 1 cut(s) 1275
FaqI GGGAC 2 cut(s) 209, 1476
FauI CCCGC 3 cut(s) 22, 365, 514
FbaI TGATCA 1 cut(s) 351
FblI GTMKAC 1 cut(s) 1311
Fnu4HI GCNGC 5 cut(s) 522, 831, 1092, 1593, 1632
FriOI GRGCYC 1 cut(s) 102
Fsp4HI GCNGC 5 cut(s) 522, 831, 1092, 1593, 1632
FspAI RTGCGCAY 1 cut(s) 1249
FspBI CTAG 3 cut(s) 194, 1032, 1756
FspI TGCGCA 1 cut(s) 1249
GlaI GCGC 1 cut(s) 1249
GluI GCNGC 5 cut(s) 522, 831, 1092, 1593, 1632
GsaI CCCAGC 2 cut(s) 639, 1109
HaeIII GGCC 2 cut(s) 1266, 1274
HapII CCGG 2 cut(s) 413, 1734
HgaI GACGC 1 cut(s) 684
HhaI GCGC 1 cut(s) 1250
Hin1I GRCGYC 1 cut(s) 695
Hin6I GCGC 1 cut(s) 1248
HinP1I GCGC 1 cut(s) 1248
HindIII AAGCTT 1 cut(s) 666
HinfI GANTC 4 cut(s) 222, 538, 1005, 1084
HpaII CCGG 2 cut(s) 413, 1734
HphI GGTGA 5 cut(s) 167, 479, 604, 748, 1484
Hpy166II GTNNAC 5 cut(s) 435, 621, 704, 1312, 1749
Hpy188I TCNGA 6 cut(s) 8, 106, 172, 498, 792, 1407
Hpy188III TCNNGA 5 cut(s) 124, 1002, 1205, 1517, 1697
Hpy8I GTNNAC 5 cut(s) 435, 621, 704, 1312, 1749
Hpy99I CGWCG 1 cut(s) 442
HpyAV CCTTC 1 cut(s) 270
HpyCH4III ACNGT 4 cut(s) 1099, 1259, 1625, 1723
HpyCH4IV ACGT 1 cut(s) 1683
HpyF10VI GCNNNNNNNGC 1 cut(s) 1589
HpySE526I ACGT 1 cut(s) 1683
Hsp92I GRCGYC 1 cut(s) 695
HspAI GCGC 1 cut(s) 1248
Ksp22I TGATCA 1 cut(s) 351
Kzo9I GATC 5 cut(s) 172, 351, 947, 996, 1063
LmnI GCTCC 1 cut(s) 394
Lsp1109I GCAGC 4 cut(s) 508, 817, 1604, 1618
LweI GCATC 8 cut(s) 47, 283, 562, 585, 958, 1111, 1235, 1551
MaeI CTAG 3 cut(s) 194, 1032, 1756
MaeII ACGT 1 cut(s) 1683
MaeIII GTNAC 5 cut(s) 159, 527, 736, 1296, 1679
MalI GATC 5 cut(s) 174, 353, 949, 998, 1065
MboI GATC 5 cut(s) 172, 351, 947, 996, 1063
MboII GAAGA 6 cut(s) 573, 616, 977, 1014, 1073, 1493
MflI RGATCY 1 cut(s) 1063
MhlI GDGCHC 3 cut(s) 102, 148, 1437
MlsI TGGCCA 1 cut(s) 1266
MluNI TGGCCA 1 cut(s) 1266
MlyI GAGTC 2 cut(s) 231, 1014
Mox20I TGGCCA 1 cut(s) 1266
Mph1103I ATGCAT 2 cut(s) 973, 1566
MroXI GAANNNNTTC 1 cut(s) 305
MscI TGGCCA 1 cut(s) 1266
MseI TTAA 5 cut(s) 935, 974, 1101, 1194, 1287
MslI CAYNNNNRTG 5 cut(s) 254, 727, 909, 966, 1260
Msp20I TGGCCA 1 cut(s) 1266
MspI CCGG 2 cut(s) 413, 1734
MspR9I CCNGG 4 cut(s) 209, 234, 600, 1734
Mva1269I GAATGC 5 cut(s) 113, 349, 507, 613, 1564
MvaI CCWGG 3 cut(s) 209, 234, 600
MvnI CGCG 1 cut(s) 509
MwoI GCNNNNNNNGC 1 cut(s) 1589
NciI CCSGG 1 cut(s) 1734
NdeII GATC 5 cut(s) 172, 351, 947, 996, 1063
NlaIV GGNNCC 1 cut(s) 1738
NmuCI GTSAC 3 cut(s) 159, 736, 1679
NsbI TGCGCA 1 cut(s) 1249
NsiI ATGCAT 2 cut(s) 973, 1566
NspI RCATGY 2 cut(s) 1353, 1510
NspV TTCGAA 1 cut(s) 25
PagI TCATGA 1 cut(s) 123
PaqCI CACCTGC 1 cut(s) 1295
PcsI WCGNNNNNNNCGW 2 cut(s) 437, 623
PctI GAATGC 5 cut(s) 113, 349, 507, 613, 1564
PdmI GAANNNNTTC 1 cut(s) 305
PfeI GAWTC 2 cut(s) 538, 1084
PflMI CCANNNNNTGG 1 cut(s) 618
PkrI GCNGC 5 cut(s) 523, 832, 1093, 1594, 1633
PleI GAGTC 2 cut(s) 230, 1013
PpsI GAGTC 2 cut(s) 230, 1013
PshBI ATTAAT 1 cut(s) 974
PsiI TTATAA 1 cut(s) 842
Psp124BI GAGCTC 1 cut(s) 102
Psp6I CCWGG 3 cut(s) 207, 232, 598
PspFI CCCAGC 2 cut(s) 635, 1105
PspGI CCWGG 3 cut(s) 207, 232, 598
PspN4I GGNNCC 1 cut(s) 1738
PspPI GGNCC 1 cut(s) 1272
PsuI RGATCY 1 cut(s) 1063
RsaI GTAC 3 cut(s) 455, 705, 809
RsaNI GTAC 3 cut(s) 454, 704, 808
RseI CAYNNNNRTG 5 cut(s) 254, 727, 909, 966, 1260
SacI GAGCTC 1 cut(s) 102
SaqAI TTAA 5 cut(s) 935, 974, 1101, 1194, 1287
SatI GCNGC 5 cut(s) 522, 831, 1092, 1593, 1632
Sau3AI GATC 5 cut(s) 172, 351, 947, 996, 1063
Sau96I GGNCC 1 cut(s) 1272
SchI GAGTC 2 cut(s) 231, 1014
ScrFI CCNGG 4 cut(s) 209, 234, 600, 1734
SduI GDGCHC 3 cut(s) 102, 148, 1437
SfaNI GCATC 8 cut(s) 47, 283, 562, 585, 958, 1111, 1235, 1551
SfcI CTRYAG 1 cut(s) 1624
SfuI TTCGAA 1 cut(s) 25
SmiMI CAYNNNNRTG 5 cut(s) 254, 727, 909, 966, 1260
SpeI ACTAGT 1 cut(s) 1031
SsiI CCGC 6 cut(s) 15, 372, 507, 1092, 1487, 1665
SspI AATATT 1 cut(s) 1216
SspMI CTAG 3 cut(s) 194, 1032, 1756
SstI GAGCTC 1 cut(s) 102
StyD4I CCNGG 4 cut(s) 207, 232, 598, 1732
StyI CCWWGG 1 cut(s) 1275
TaaI ACNGT 4 cut(s) 1099, 1259, 1625, 1723
TaiI ACGT 1 cut(s) 1686
TaqI TCGA 5 cut(s) 25, 533, 626, 1608, 1696
TatI WGTACW 1 cut(s) 703
TauI GCSGC 1 cut(s) 1094
TfiI GAWTC 2 cut(s) 538, 1084
Tru1I TTAA 5 cut(s) 935, 974, 1101, 1194, 1287
Tru9I TTAA 5 cut(s) 935, 974, 1101, 1194, 1287
TscAI CASTG 1 cut(s) 1274
TseFI GTSAC 3 cut(s) 159, 736, 1679
TseI GCWGC 4 cut(s) 521, 830, 1592, 1631
Tsp45I GTSAC 3 cut(s) 159, 736, 1679
TspGWI ACGGA 1 cut(s) 1058
TspRI CASTG 1 cut(s) 1274
Van91I CCANNNNNTGG 1 cut(s) 618
VspI ATTAAT 1 cut(s) 974
XapI RAATTY 7 cut(s) 751, 874, 952, 1042, 1200, 1228, 1692
XceI RCATGY 2 cut(s) 1353, 1510
XcmI CCANNNNNNNNNTGG 1 cut(s) 1576
XmiI GTMKAC 1 cut(s) 1311
XmnI GAANNNNTTC 1 cut(s) 305
XspI CTAG 3 cut(s) 194, 1032, 1756
Zsp2I ATGCAT 2 cut(s) 973, 1566
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.