MD05G1293900.v1.1

Protein NRT1 PTR FAMILY

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0016782
Physical Location & Seq
Reverse (-)
42659455 .. 42665121
5667 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1293900.v1.1.491

Sequence Viewer

Length: 1809 bp
ATGATATTGTCGAACGTATTTCATGAACCAAGGGAGAAACTTGAGCTTGTTGAAGGGAAGGTTGATTGGAAGGGAAGGTCAGCTGTGAAATATAAACATGGAGGAATGAAAACTGCTGTGCTCATACTAGGTACATTTGCTTTTGAGAACATGGCAACTCTTGCCCTGGCTGTGAACTTGGTTACCTACTTCAATAGGGTCATGCACTTTGAGCTAGCAGATGCAGCTAACCAACTCACCAACTACATGGGAACGGGCTATATTCTGTCCATTCTCATGGCCATCCTTGCAGACACCTTCTTTGGGAGATTCAAAACTCTTCTCATTTCCGGGTGCTTCGAGTTTGTGGGACTAGCACTAATGACTGTGCAAGCTCACTACCCTAAACTGACGCCACCAGTCTGCAATGTCTTTGATCCAACTGCAAAATGTGAAAAAGTTGAAGGTGGAAATGCTGCCCTTCTTTTTATTGCTCTCTACATTATGGCGGCCGGAGCTTCCGGGCTGAAGGCCACGTTACCATCACACGGTGCTGATCAATTTGACGAATCGGACCCGAGAGAGGCAAGGCAGATGTCTAGCTTCTTTAACTTTCTGTTGCTAGCAGTGTGCTTGGGTGGTGTAGTCAGTTTAACCCTAATTGTGTGGGTTCAAGACAATAAAGGATGGGATTGGGGATTTGGGATCTCTACTATCGCCATGTTCTTGGGCGTCGTCATCTTTTTCGCAGGATTGCCGTTGTATCGGATACAAGTTATCGGAGGAACTAGTGCTATAGTTGAACTTATACAGGTGTATGTTGCAGCCATCCGCAACAAAAATCTTAGCCTTCCTGAGGACCCCGCAGAATTGTATGAGATTAGCAAAGACAAGGAAGCTGCTCTTGAACAAGAATTCCTACCTCACAGACCCATTTTCAGGTTTTTGGACAAAGCATCCATCCGAAGAGGGCAAGTTGATGAACAACAGCCTCCAAACCCATGGAAACTTTGCAGAGTCACGCAAGTGGAAAATGCAAAAATCATCCTAGGCATGGTCCCAATATTTTGCTGCACAATTATAATGACTCTATGCCTGGCGCAACTCCAAACCTTCTCCATCCAACAAGGTCTCACCATGGACACAAGTATCACCAAACACTTCAAAATCCCACCAGCCTCACTCCCCATCATCCCCATTGTCTTCCTCGCCATCATAATTCCTGTCTACGACAGTGTCTTCGTCCCCATCGCAAGTAAGTTCACCGGCATACCCTCTGGCATAACGCACTTACAGCGCATAGGCGTGGGTTTAGTTCTCTCATGTGTTTCCATGGGTGTGGCTGGAATCATGGAAGTGAAAAGGAAAGATGTGGCAAGAGAGCACAACATGCTGTTGGCAAGGCCGGTGGTGCAGCCTTTGCCAATCAGCACATTCTGGCTGTCTTTCCAGTACTTCATTTTTGGAATCGCCGACATGTTCACATACGTAGGGCTTCTTGAGTTTTTCTACTCGGAGTCTCCCAAAGGGTTGAAATCAATTTCAACTTGCTTTTTGTGGAGCTCCATGGCACTAGGGTATTTTTTCAGCACCATTTTGGTTAAGATTGTGAATAATGCAACAAAGGGTGTCACAAAAAGTGGAGGCTGGTTGGCTGGGAACAACATTAACTTGAACCATTTGAATCTTTTCTATTGGTTGCTTTCATTGATGAGCTTGATCAACTTCTTTATCTATGTGTTTGTTGCAAAGAGGTACAAGTATAGGCCTGGGAGCCCCATGCTGGTTTCAAAGGAGAAGAAGAAGGAAATTGAGGTTAATGAGTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PTR2

Protein Analysis

603

Amino Acids

67.05

Weight (kDa)

8.81

Isoelectric Point (pI)

31.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PTR2 PF00854 104 - 536 2.5e-85 POT family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016782)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06770
malus_domestica MD05G1293900.v1.1 MD10G1271800.v1.1
prunus_persica Prupe.4G070100_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0012361
rosa_laevigata RLG00000031907
rosa_multiflora Rmu_sc0003469.1_g000017
rosa_roxburghii Rroxscaffold_1G00064300
rosa_rugosa Rorug05G0000700
rosa_samantha Rh5AG094900 Rh5BG091200 Rh5CG104200 Rh5DG090600
rosa_wichuraiana Rw5G008300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1061
AccI GTMKAC 1 cut(s) 1206
AciI CCGC 3 cut(s) 488, 811, 843
AclWI GGATC 2 cut(s) 410, 692
AcoI YGGCCR 2 cut(s) 279, 489
AcsI RAATTY 1 cut(s) 893
AcuI CTGAAG 1 cut(s) 527
AcyI GRCGYC 2 cut(s) 392, 711
AdeI CACNNNGTG 1 cut(s) 530
AfaI GTAC 3 cut(s) 133, 1433, 1736
AfiI CCNNNNNNNGG 7 cut(s) 303, 527, 562, 835, 918, 1033, 1762
AflIII ACRYGT 1 cut(s) 1455
AhlI ACTAGT 1 cut(s) 767
AjnI CCWGG 3 cut(s) 165, 1074, 1747
AleI CACNNNNGTG 1 cut(s) 1004
AloI GAACNNNNNNTCC 2 cut(s) 879, 911
Alw21I GWGCWC 3 cut(s) 123, 1365, 1544
Alw26I GTCTC 2 cut(s) 1115, 1503
AlwI GGATC 2 cut(s) 410, 692
Ama87I CYCGRG 1 cut(s) 556
AoxI GGCC 5 cut(s) 279, 489, 510, 1382, 1745
ApeKI GCWGC 6 cut(s) 224, 455, 803, 878, 1050, 1393
ApoI RAATTY 1 cut(s) 893
ArsI GACNNNNNNTTYG 4 cut(s) 284, 316, 1202, 1234
Asp700I GAANNNNTTC 1 cut(s) 1667
AspA2I CCTAGG 1 cut(s) 1027
AspLEI GCGC 2 cut(s) 1081, 1278
AspS9I GGNCC 3 cut(s) 553, 838, 1036
AsuC2I CCSGG 2 cut(s) 331, 502
AsuHPI GGTGA 4 cut(s) 229, 1105, 1123, 1234
AsuNHI GCTAGC 2 cut(s) 214, 601
AvaI CYCGRG 1 cut(s) 556
AvaII GGWCC 3 cut(s) 553, 838, 1036
AvrII CCTAGG 1 cut(s) 1027
AxyI CCTNAGG 1 cut(s) 834
BaeI ACNNNNGTAYC 2 cut(s) 1111, 1144
BalI TGGCCA 1 cut(s) 281
BanII GRGCYC 2 cut(s) 1544, 1757
BbsI GAAGAC 2 cut(s) 1174, 1210
Bbv12I GWGCWC 3 cut(s) 123, 1365, 1544
BbvI GCAGC 6 cut(s) 236, 442, 815, 865, 1037, 1405
BccI CCATC 9 cut(s) 290, 529, 660, 815, 947, 1106, 1175, 1199, 1235
BceAI ACGGC 1 cut(s) 721
BciT130I CCWGG 3 cut(s) 167, 1076, 1749
BciVI GTATCC 1 cut(s) 741
BclI TGATCA 2 cut(s) 535, 1698
BcnI CCSGG 2 cut(s) 331, 502
BcoDI GTCTC 2 cut(s) 1115, 1503
BcuI ACTAGT 1 cut(s) 767
BfaI CTAG 8 cut(s) 128, 215, 353, 579, 602, 768, 1028, 1553
BfmI CTRYAG 1 cut(s) 774
BfuI GTATCC 1 cut(s) 741
BisI GCNGC 7 cut(s) 225, 456, 489, 804, 879, 1051, 1394
BlnI CCTAGG 1 cut(s) 1027
BlsI GCNGC 7 cut(s) 226, 457, 490, 805, 880, 1052, 1395
BmcAI AGTACT 1 cut(s) 1433
Bme1390I CCNGG 5 cut(s) 167, 331, 502, 1076, 1749
Bme18I GGWCC 3 cut(s) 553, 838, 1036
BmeT110I CYCGRG 1 cut(s) 556
BmgT120I GGNCC 3 cut(s) 553, 838, 1036
BmiI GGNNCC 4 cut(s) 555, 840, 1038, 1754
BmrFI CCNGG 5 cut(s) 167, 331, 502, 1076, 1749
BmsI GCATC 2 cut(s) 211, 944
BmtI GCTAGC 2 cut(s) 218, 605
BpiI GAAGAC 2 cut(s) 1174, 1210
BpuEI CTTGAG 2 cut(s) 62, 1499
BpuMI CCSGG 2 cut(s) 331, 502
BsaAI YACGTR 1 cut(s) 1468
BsaHI GRCGYC 2 cut(s) 392, 711
BsaI GGTCTC 1 cut(s) 1115
BsaJI CCNNGG 8 cut(s) 29, 165, 980, 1027, 1116, 1311, 1545, 1748
Bsc4I CCNNNNNNNGG 7 cut(s) 303, 527, 562, 835, 918, 1033, 1762
Bse118I RCCGGY 2 cut(s) 1244, 1384
Bse1I ACTGG 2 cut(s) 398, 1429
Bse21I CCTNAGG 1 cut(s) 834
Bse3DI GCAATG 1 cut(s) 412
BseBI CCWGG 3 cut(s) 167, 1076, 1749
BseDI CCNNGG 8 cut(s) 29, 165, 980, 1027, 1116, 1311, 1545, 1748
BseGI GGATG 8 cut(s) 282, 671, 807, 935, 939, 1023, 1098, 1170
BseLI CCNNNNNNNGG 7 cut(s) 303, 527, 562, 835, 918, 1033, 1762
BseMI GCAATG 1 cut(s) 412
BseMII CTCAG 1 cut(s) 825
BseNI ACTGG 2 cut(s) 398, 1429
BseX3I CGGCCG 1 cut(s) 489
BseXI GCAGC 6 cut(s) 236, 442, 815, 865, 1037, 1405
BseYI CCCAGC 1 cut(s) 1634
BsgI GTGCAG 2 cut(s) 1036, 1412
Bsh1285I CGRYCG 1 cut(s) 492
BshFI GGCC 5 cut(s) 281, 491, 512, 1384, 1747
BsiEI CGRYCG 1 cut(s) 492
BsiHKAI GWGCWC 3 cut(s) 123, 1365, 1544
BsiHKCI CYCGRG 1 cut(s) 556
BsiSI CCGG 5 cut(s) 330, 492, 501, 1245, 1385
BslFI GGGAC 3 cut(s) 363, 1022, 1208
BslI CCNNNNNNNGG 7 cut(s) 303, 527, 562, 835, 918, 1033, 1762
BsmAI GTCTC 2 cut(s) 1115, 1503
BsmFI GGGAC 3 cut(s) 363, 1022, 1208
BsnI GGCC 5 cut(s) 281, 491, 512, 1384, 1747
Bso31I GGTCTC 1 cut(s) 1115
BsoBI CYCGRG 1 cut(s) 556
Bsp1286I GDGCHC 4 cut(s) 123, 1365, 1544, 1757
Bsp143I GATC 4 cut(s) 415, 535, 684, 1698
Bsp19I CCATGG 4 cut(s) 980, 1116, 1311, 1545
BspACI CCGC 3 cut(s) 488, 811, 843
BspANI GGCC 5 cut(s) 281, 491, 512, 1384, 1747
BspCNI CTCAG 1 cut(s) 826
BspHI TCATGA 1 cut(s) 22
BspLI GGNNCC 4 cut(s) 555, 840, 1038, 1754
BspOI GCTAGC 2 cut(s) 218, 605
BspPI GGATC 2 cut(s) 410, 692
BspTNI GGTCTC 1 cut(s) 1115
BsrDI GCAATG 1 cut(s) 412
BsrFI RCCGGY 2 cut(s) 1244, 1384
BsrI ACTGG 2 cut(s) 398, 1429
BssAI RCCGGY 2 cut(s) 1244, 1384
BssECI CCNNGG 8 cut(s) 29, 165, 980, 1027, 1116, 1311, 1545, 1748
BssMI GATC 4 cut(s) 415, 535, 684, 1698
BssNI GRCGYC 2 cut(s) 392, 711
BssT1I CCWWGG 6 cut(s) 29, 980, 1027, 1116, 1311, 1545
Bst2UI CCWGG 3 cut(s) 167, 1076, 1749
Bst4CI ACNGT 3 cut(s) 367, 530, 1214
Bst6I CTCTTC 2 cut(s) 324, 940
BstACI GRCGYC 2 cut(s) 392, 711
BstAPI GCANNNNNTGC 3 cut(s) 161, 1369, 1399
BstBAI YACGTR 1 cut(s) 1468
BstC8I GCNNGC 3 cut(s) 216, 372, 603
BstDEI CTNAG 2 cut(s) 824, 834
BstDSI CCRYGG 4 cut(s) 980, 1116, 1311, 1545
BstEII GGTNACC 1 cut(s) 181
BstENI CCTNNNNNAGG 1 cut(s) 833
BstF5I GGATG 8 cut(s) 282, 671, 807, 935, 939, 1023, 1098, 1170
BstHHI GCGC 2 cut(s) 1081, 1278
BstKTI GATC 4 cut(s) 418, 538, 687, 1701
BstMAI GTCTC 2 cut(s) 1115, 1503
BstMBI GATC 4 cut(s) 415, 535, 684, 1698
BstMCI CGRYCG 1 cut(s) 492
BstMWI GCNNNNNNNGC 9 cut(s) 161, 211, 224, 287, 494, 1273, 1369, 1390, 1399
BstNI CCWGG 3 cut(s) 167, 1076, 1749
BstNSI RCATGY 2 cut(s) 1372, 1459
BstPI GGTNACC 1 cut(s) 181
BstSCI CCNGG 5 cut(s) 165, 329, 500, 1074, 1747
BstSFI CTRYAG 1 cut(s) 774
BstSNI TACGTA 1 cut(s) 1468
BstV1I GCAGC 6 cut(s) 236, 442, 815, 865, 1037, 1405
BstV2I GAAGAC 2 cut(s) 1174, 1210
BstX2I RGATCY 1 cut(s) 684
BstXI CCANNNNNNTGG 5 cut(s) 247, 277, 706, 981, 1318
BstYI RGATCY 1 cut(s) 684
BstZI CGGCCG 1 cut(s) 489
Bsu36I CCTNAGG 1 cut(s) 834
BsuI GTATCC 1 cut(s) 741
BsuRI GGCC 5 cut(s) 281, 491, 512, 1384, 1747
BtgI CCRYGG 4 cut(s) 980, 1116, 1311, 1545
BtgZI GCGATG 1 cut(s) 1213
BtsCI GGATG 8 cut(s) 282, 671, 807, 935, 939, 1023, 1098, 1170
BtsI GCAGTG 1 cut(s) 612
BtsIMutI CAGTG 2 cut(s) 612, 1219
Cac8I GCNNGC 3 cut(s) 216, 372, 603
CciI TCATGA 1 cut(s) 22
CfoI GCGC 2 cut(s) 1081, 1278
Cfr10I RCCGGY 2 cut(s) 1244, 1384
Cfr13I GGNCC 3 cut(s) 553, 838, 1036
CseI GACGC 2 cut(s) 400, 700
Csp6I GTAC 3 cut(s) 132, 1432, 1735
CspCI CAANNNNNGTGG 2 cut(s) 1368, 1403
CviQI GTAC 3 cut(s) 132, 1432, 1735
DdeI CTNAG 2 cut(s) 824, 834
DpnI GATC 4 cut(s) 417, 537, 686, 1700
DpnII GATC 4 cut(s) 415, 535, 684, 1698
DraIII CACNNNGTG 1 cut(s) 530
EaeI YGGCCR 2 cut(s) 279, 489
EagI CGGCCG 1 cut(s) 489
Eam1104I CTCTTC 2 cut(s) 324, 940
EarI CTCTTC 2 cut(s) 324, 940
Ecl136II GAGCTC 1 cut(s) 1542
EclXI CGGCCG 1 cut(s) 489
Eco105I TACGTA 1 cut(s) 1468
Eco130I CCWWGG 6 cut(s) 29, 980, 1027, 1116, 1311, 1545
Eco147I AGGCCT 1 cut(s) 1747
Eco24I GRGCYC 2 cut(s) 1544, 1757
Eco31I GGTCTC 1 cut(s) 1115
Eco47I GGWCC 3 cut(s) 553, 838, 1036
Eco52I CGGCCG 1 cut(s) 489
Eco53kI GAGCTC 1 cut(s) 1542
Eco57I CTGAAG 1 cut(s) 527
Eco81I CCTNAGG 1 cut(s) 834
Eco88I CYCGRG 1 cut(s) 556
Eco91I GGTNACC 1 cut(s) 181
EcoICRI GAGCTC 1 cut(s) 1542
EcoNI CCTNNNNNAGG 1 cut(s) 833
EcoO109I RGGNCCY 1 cut(s) 838
EcoO65I GGTNACC 1 cut(s) 181
EcoRI GAATTC 1 cut(s) 893
EcoRII CCWGG 3 cut(s) 165, 1074, 1747
EcoT14I CCWWGG 6 cut(s) 29, 980, 1027, 1116, 1311, 1545
EcoT38I GRGCYC 2 cut(s) 1544, 1757
ErhI CCWWGG 6 cut(s) 29, 980, 1027, 1116, 1311, 1545
FalI AAGNNNNNCTT 2 cut(s) 867, 899
FaqI GGGAC 3 cut(s) 363, 1022, 1208
FauI CCCGC 1 cut(s) 850
FbaI TGATCA 2 cut(s) 535, 1698
FblI GTMKAC 1 cut(s) 1206
Fnu4HI GCNGC 7 cut(s) 225, 456, 489, 804, 879, 1051, 1394
FokI GGATG 8 cut(s) 269, 678, 794, 922, 926, 1010, 1085, 1157
FriOI GRGCYC 2 cut(s) 1544, 1757
Fsp4HI GCNGC 7 cut(s) 225, 456, 489, 804, 879, 1051, 1394
FspBI CTAG 8 cut(s) 128, 215, 353, 579, 602, 768, 1028, 1553
GlaI GCGC 2 cut(s) 1080, 1277
GluI GCNGC 7 cut(s) 225, 456, 489, 804, 879, 1051, 1394
GsaI CCCAGC 1 cut(s) 1638
HaeIII GGCC 5 cut(s) 281, 491, 512, 1384, 1747
HapII CCGG 5 cut(s) 330, 492, 501, 1245, 1385
HgaI GACGC 2 cut(s) 400, 700
HhaI GCGC 2 cut(s) 1081, 1278
Hin1I GRCGYC 2 cut(s) 392, 711
Hin6I GCGC 2 cut(s) 1079, 1276
HinP1I GCGC 2 cut(s) 1079, 1276
HinfI GANTC 8 cut(s) 309, 548, 996, 1066, 1326, 1446, 1496, 1663
HpaII CCGG 5 cut(s) 330, 492, 501, 1245, 1385
HphI GGTGA 4 cut(s) 229, 1105, 1123, 1234
Hpy166II GTNNAC 4 cut(s) 175, 1207, 1242, 1461
Hpy188I TCNGA 6 cut(s) 553, 747, 761, 944, 1495, 1808
Hpy188III TCNNGA 5 cut(s) 23, 653, 833, 884, 1478
Hpy8I GTNNAC 4 cut(s) 175, 1207, 1242, 1461
Hpy99I CGWCG 1 cut(s) 716
HpyCH4III ACNGT 3 cut(s) 367, 530, 1214
HpyCH4IV ACGT 3 cut(s) 15, 515, 1467
HpyF10VI GCNNNNNNNGC 9 cut(s) 161, 211, 224, 287, 494, 1273, 1369, 1390, 1399
HpyF3I CTNAG 2 cut(s) 824, 834
HpySE526I ACGT 3 cut(s) 15, 515, 1467
Hsp92I GRCGYC 2 cut(s) 392, 711
HspAI GCGC 2 cut(s) 1079, 1276
Ksp22I TGATCA 2 cut(s) 535, 1698
Kzo9I GATC 4 cut(s) 415, 535, 684, 1698
LmnI GCTCC 4 cut(s) 494, 1539, 1547, 1752
Lsp1109I GCAGC 6 cut(s) 236, 442, 815, 865, 1037, 1405
LweI GCATC 2 cut(s) 211, 944
MaeI CTAG 8 cut(s) 128, 215, 353, 579, 602, 768, 1028, 1553
MaeII ACGT 3 cut(s) 15, 515, 1467
MaeIII GTNAC 4 cut(s) 181, 516, 997, 1609
MalI GATC 4 cut(s) 417, 537, 686, 1700
MboI GATC 4 cut(s) 415, 535, 684, 1698
MboII GAAGA 6 cut(s) 311, 957, 1174, 1210, 1789, 1792
MflI RGATCY 1 cut(s) 684
MhlI GDGCHC 4 cut(s) 123, 1365, 1544, 1757
MlsI TGGCCA 1 cut(s) 281
MluCI AATT 8 cut(s) 539, 639, 848, 893, 1056, 1197, 1518, 1788
MluNI TGGCCA 1 cut(s) 281
MlyI GAGTC 3 cut(s) 1005, 1060, 1505
MmeI TCCRAC 2 cut(s) 443, 1126
Mox20I TGGCCA 1 cut(s) 281
MroXI GAANNNNTTC 1 cut(s) 1667
MscI TGGCCA 1 cut(s) 281
MseI TTAA 5 cut(s) 588, 632, 1581, 1647, 1797
MslI CAYNNNNRTG 5 cut(s) 275, 1004, 1283, 1316, 1334
Msp20I TGGCCA 1 cut(s) 281
MspA1I CMGCKG 1 cut(s) 83
MspI CCGG 5 cut(s) 330, 492, 501, 1245, 1385
MspR9I CCNGG 5 cut(s) 167, 331, 502, 1076, 1749
MvaI CCWGG 3 cut(s) 167, 1076, 1749
MwoI GCNNNNNNNGC 9 cut(s) 161, 211, 224, 287, 494, 1273, 1369, 1390, 1399
NciI CCSGG 2 cut(s) 331, 502
NcoI CCATGG 4 cut(s) 980, 1116, 1311, 1545
NdeII GATC 4 cut(s) 415, 535, 684, 1698
NheI GCTAGC 2 cut(s) 214, 601
NlaIV GGNNCC 4 cut(s) 555, 840, 1038, 1754
NmuCI GTSAC 2 cut(s) 997, 1609
NspI RCATGY 2 cut(s) 1372, 1459
OliI CACNNNNGTG 1 cut(s) 1004
PagI TCATGA 1 cut(s) 22
PceI AGGCCT 1 cut(s) 1747
PciI ACATGT 1 cut(s) 1455
PdmI GAANNNNTTC 1 cut(s) 1667
PfeI GAWTC 5 cut(s) 309, 548, 1326, 1446, 1663
PflFI GACNNNGTC 1 cut(s) 1214
PkrI GCNGC 7 cut(s) 226, 457, 490, 805, 880, 1052, 1395
PleI GAGTC 3 cut(s) 1004, 1060, 1504
PpsI GAGTC 3 cut(s) 1004, 1060, 1504
Ppu21I YACGTR 1 cut(s) 1468
PpuMI RGGWCCY 1 cut(s) 838
PscI ACATGT 1 cut(s) 1455
PsiI TTATAA 1 cut(s) 1061
Psp124BI GAGCTC 1 cut(s) 1544
Psp5II RGGWCCY 1 cut(s) 838
Psp6I CCWGG 3 cut(s) 165, 1074, 1747
PspEI GGTNACC 1 cut(s) 181
PspFI CCCAGC 1 cut(s) 1634
PspGI CCWGG 3 cut(s) 165, 1074, 1747
PspN4I GGNNCC 4 cut(s) 555, 840, 1038, 1754
PspPI GGNCC 3 cut(s) 553, 838, 1036
PspPPI RGGWCCY 1 cut(s) 838
PsuI RGATCY 1 cut(s) 684
PsyI GACNNNGTC 1 cut(s) 1214
PvuII CAGCTG 1 cut(s) 83
RsaI GTAC 3 cut(s) 133, 1433, 1736
RsaNI GTAC 3 cut(s) 132, 1432, 1735
RseI CAYNNNNRTG 5 cut(s) 275, 1004, 1283, 1316, 1334
SacI GAGCTC 1 cut(s) 1544
SaqAI TTAA 5 cut(s) 588, 632, 1581, 1647, 1797
SatI GCNGC 7 cut(s) 225, 456, 489, 804, 879, 1051, 1394
Sau3AI GATC 4 cut(s) 415, 535, 684, 1698
Sau96I GGNCC 3 cut(s) 553, 838, 1036
ScaI AGTACT 1 cut(s) 1433
SchI GAGTC 3 cut(s) 1005, 1060, 1505
ScrFI CCNGG 5 cut(s) 167, 331, 502, 1076, 1749
SduI GDGCHC 4 cut(s) 123, 1365, 1544, 1757
SfaNI GCATC 2 cut(s) 211, 944
SfcI CTRYAG 1 cut(s) 774
SinI GGWCC 3 cut(s) 553, 838, 1036
SmiMI CAYNNNNRTG 5 cut(s) 275, 1004, 1283, 1316, 1334
SmlI CTYRAG 2 cut(s) 41, 1478
SmoI CTYRAG 2 cut(s) 41, 1478
SnaBI TACGTA 1 cut(s) 1468
SpeI ACTAGT 1 cut(s) 767
Sse9I AATT 8 cut(s) 539, 639, 848, 893, 1056, 1197, 1518, 1788
SseBI AGGCCT 1 cut(s) 1747
SsiI CCGC 3 cut(s) 488, 811, 843
SspI AATATT 1 cut(s) 1044
SspMI CTAG 8 cut(s) 128, 215, 353, 579, 602, 768, 1028, 1553
SstI GAGCTC 1 cut(s) 1544
StuI AGGCCT 1 cut(s) 1747
StyD4I CCNGG 5 cut(s) 165, 329, 500, 1074, 1747
StyI CCWWGG 6 cut(s) 29, 980, 1027, 1116, 1311, 1545
TaaI ACNGT 3 cut(s) 367, 530, 1214
TaiI ACGT 3 cut(s) 18, 518, 1470
TaqI TCGA 2 cut(s) 11, 339
TasI AATT 8 cut(s) 539, 639, 848, 893, 1056, 1197, 1518, 1788
TatI WGTACW 1 cut(s) 1431
TauI GCSGC 1 cut(s) 491
TfiI GAWTC 5 cut(s) 309, 548, 1326, 1446, 1663
Tru1I TTAA 5 cut(s) 588, 632, 1581, 1647, 1797
Tru9I TTAA 5 cut(s) 588, 632, 1581, 1647, 1797
TscAI CASTG 2 cut(s) 612, 1219
TseFI GTSAC 2 cut(s) 997, 1609
TseI GCWGC 6 cut(s) 224, 455, 803, 878, 1050, 1393
Tsp45I GTSAC 2 cut(s) 997, 1609
TspDTI ATGAA 6 cut(s) 11, 39, 122, 975, 1426, 1674
TspRI CASTG 2 cut(s) 612, 1219
Tth111I GACNNNGTC 1 cut(s) 1214
VpaK11BI GGWCC 3 cut(s) 553, 838, 1036
XagI CCTNNNNNAGG 1 cut(s) 833
XapI RAATTY 1 cut(s) 893
XceI RCATGY 2 cut(s) 1372, 1459
XmaJI CCTAGG 1 cut(s) 1027
XmiI GTMKAC 1 cut(s) 1206
XmnI GAANNNNTTC 1 cut(s) 1667
XspI CTAG 8 cut(s) 128, 215, 353, 579, 602, 768, 1028, 1553
ZrmI AGTACT 1 cut(s) 1433
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.