Rmu_sc0003469.1_g000017

Protein NRT1 PTR FAMILY

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003469.1
OG0016782
Physical Location & Seq
Reverse (-)
73891 .. 77198
3308 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003469.1_g000017.1.cds

Sequence Viewer

Length: 1965 bp
atgatgggcctggtgcaatccatcggtggactctcatattgggctggaactgttttgggctggggttctgccctagtctatcctatgtaccactgtggctccttcacgaatccttgttctgaccatgatgtgtcagcgggtggaacatctagcaccagaggcattgctcaagagagatcattcatcattgtagctatggagatggaaaagaaggttgagtttgttgaaggaaaggtggattggaagggaaggacagctgtgaaacataaacatggaggaatgagaactgcttttctcatacttgctacatttggttttgagaacatggcaactttggctttggcggtgaacttggttacatacttcaatggggtgatgcattttgaaatatctgatgccgctaaccaacttaccaacttcgccggcactggttatattctctccattatcatggccatccttgcagacacattcttcggccgattcaaaacccttctcatttcagcttgcttcgagttcgtcgggctaggattactaaccgtgcaagctcactatccaagtctccagccaccggtctgtaacgtgtttgatccaacttcttcttgcgagaaagttactggtggcaatgctgctttgcttttcattgctctctacatattggcagcaggggctgcaggagtcaaagctaccttgccatcacatggtgcagatcaatttgatgaaaaagatccaaaagagacgaggcagatgtcgagcttcttcaatctgttcttactagcagtatgtctgggtggtgtggtcagcctaacactaattgtgtggatccaagacaataaaggatgggattggggatttgggatttctacaatcgccatgttcttgggtgtcgtcgtcttcttttcaggattgcctatgtaccggatacaagctattcgaggaactagtgcaataatcgaaattatacaggtgtatgttgccgcggtccgcaacagaaatctcacccttcctgagaacccttcagatctctatgagatcgaggcagacaaggaagcttcacttgaagaagaattcctacctcacagacccattttcggcttcttggacaaggcagcaattaaacgagggcaaaatgatgacgccgaatctctaaactcatggaagctttgcagagtcacccaagtcgaaaatgcaaagataatactaggcatggtgcccatattcctatgcacaatcataatgactctttgcttggctcagctccaaaccttttcaatccaacaaggcctcaccatggacacaagcattacaaaaaacttcaaaatcccaccagcctcactccccatcatcccaatcatgttcctcgtgatcataatccccgtctacgacagaatctttgtccccttggccagcaaattctccggcattccctccggaatcacccatctacagcgcataggcgtcggcctagtcctctcctgtgtctccatgggcgtggctggaatcatggaagtcaagagaaaagacgtggcgagagaccacaacatgctggatgcaatcccagtgctgcagccactccccatcagcacattctggctgtcattccagtacttcattttcggaatcgctgacatgttcacctacgttggtctccttgagtttttctactcggaggcaccaaaagggctcaaatccatctcgacttgcttcctatggagctcaatggcactcgggtacttcttcagcacagtgttggttaagattgtgaatgcggcaacacatgcgagcaatgggggttggctggctgggaacaacatcaacaggaaccacttgaaccttttctattggttgctttcagggatgagcttcttgaacttcttcctctatctgtttgtttcaaggaggtataagtataggccagggagtcccatgctggtctcaaaagatgacaaggaggataagctctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PTR2

Protein Analysis

654

Amino Acids

72.17

Weight (kDa)

7.16

Isoelectric Point (pI)

31.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016782)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06770
malus_domestica MD05G1293900.v1.1 MD10G1271800.v1.1
prunus_persica Prupe.4G070100_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0012361
rosa_laevigata RLG00000031907
rosa_multiflora Rmu_sc0003469.1_g000017
rosa_roxburghii Rroxscaffold_1G00064300
rosa_rugosa Rorug05G0000700
rosa_samantha Rh5AG094900 Rh5BG091200 Rh5CG104200 Rh5DG090600
rosa_wichuraiana Rw5G008300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1210, 1672
AccB7I CCANNNNNTGG 1 cut(s) 701
AccI GTMKAC 1 cut(s) 1380
AccII CGCG 1 cut(s) 980
AccIII TCCGGA 1 cut(s) 1430
AciI CCGC 7 cut(s) 137, 344, 399, 978, 980, 985, 1769
AclWI GGATC 4 cut(s) 584, 722, 817, 830
AcoI YGGCCR 3 cut(s) 453, 478, 1404
AcsI RAATTY 2 cut(s) 1067, 1412
AcuI CTGAAG 2 cut(s) 1002, 1723
AcyI GRCGYC 2 cut(s) 1137, 1458
AdeI CACNNNGTG 1 cut(s) 704
AfaI GTAC 4 cut(s) 89, 917, 1607, 1733
AfiI CCNNNNNNNGG 4 cut(s) 571, 701, 1091, 1291
AflIII ACRYGT 2 cut(s) 582, 1629
AgeI ACCGGT 1 cut(s) 571
AhlI ACTAGT 1 cut(s) 941
AjiI CACGTC 1 cut(s) 1525
AjnI CCWGG 2 cut(s) 9, 1915
AjuI GAANNNNNNNTTGG 2 cut(s) 223, 255
Alw21I GWGCWC 1 cut(s) 1718
Alw26I GTCTC 6 cut(s) 566, 731, 1486, 1527, 1652, 1939
AlwI GGATC 4 cut(s) 584, 722, 817, 830
AlwNI CAGNNNCTG 1 cut(s) 671
Ama87I CYCGRG 1 cut(s) 1727
Aor13HI TCCGGA 1 cut(s) 1430
AoxI GGCC 7 cut(s) 7, 453, 478, 1282, 1404, 1462, 1913
ApeKI GCWGC 6 cut(s) 629, 662, 671, 1109, 1564, 1567
ApoI RAATTY 2 cut(s) 1067, 1412
ArsI GACNNNNNNTTYG 4 cut(s) 458, 490, 1376, 1408
AsiGI ACCGGT 1 cut(s) 571
Asp700I GAANNNNTTC 2 cut(s) 1835, 1874
AspLEI GCGC 1 cut(s) 1452
AspS9I GGNCC 2 cut(s) 7, 982
AsuHPI GGTGA 7 cut(s) 358, 385, 991, 1165, 1279, 1429, 1627
AvaI CYCGRG 1 cut(s) 1727
AvaII GGWCC 1 cut(s) 982
BaeGI GKGCMC 1 cut(s) 1215
BalI TGGCCA 2 cut(s) 455, 1406
BamHI GGATCC 1 cut(s) 822
BanI GGYRCC 2 cut(s) 1210, 1672
BanII GRGCYC 2 cut(s) 1686, 1718
BarI GAAGNNNNNNTAC 2 cut(s) 1056, 1088
BauI CACGAG 1 cut(s) 1361
BbsI GAAGAC 1 cut(s) 886
Bbv12I GWGCWC 1 cut(s) 1718
BbvI GCAGC 6 cut(s) 616, 658, 674, 1121, 1551, 1579
BccI CCATC 9 cut(s) 29, 196, 464, 703, 834, 1349, 1449, 1586, 1700
BcgI CGANNNNNNTGC 2 cut(s) 1441, 1475
BciT130I CCWGG 2 cut(s) 11, 1917
BciVI GTATCC 1 cut(s) 915
BclI TGATCA 1 cut(s) 1365
BcoDI GTCTC 6 cut(s) 566, 731, 1486, 1527, 1652, 1939
BcuI ACTAGT 1 cut(s) 941
BfaI CTAG 7 cut(s) 74, 150, 527, 776, 942, 1202, 1466
BfmI CTRYAG 3 cut(s) 672, 1445, 1565
BfuI GTATCC 1 cut(s) 915
BglII AGATCT 1 cut(s) 1021
BisI GCNGC 9 cut(s) 399, 630, 663, 672, 978, 1110, 1565, 1568, 1770
BlpI GCTNAGC 1 cut(s) 1254
BlsI GCNGC 9 cut(s) 400, 631, 664, 673, 979, 1111, 1566, 1569, 1771
BmcAI AGTACT 1 cut(s) 1607
Bme1390I CCNGG 2 cut(s) 11, 1917
Bme18I GGWCC 1 cut(s) 982
BmeT110I CYCGRG 1 cut(s) 1727
BmgBI CACGTC 1 cut(s) 1525
BmgT120I GGNCC 2 cut(s) 7, 982
BmiI GGNNCC 5 cut(s) 100, 824, 1212, 1674, 1823
BmrFI CCNGG 2 cut(s) 11, 1917
BmrI ACTGGG 1 cut(s) 1553
BmsI GCATC 3 cut(s) 366, 385, 1540
BmuI ACTGGG 1 cut(s) 1553
BpiI GAAGAC 1 cut(s) 886
BpmI CTGGAG 1 cut(s) 548
Bpu1102I GCTNAGC 1 cut(s) 1254
BpuEI CTTGAG 2 cut(s) 153, 1673
BsaBI GATNNNNATC 1 cut(s) 1370
BsaHI GRCGYC 2 cut(s) 1137, 1458
BsaI GGTCTC 3 cut(s) 1527, 1652, 1939
BsaJI CCNNGG 5 cut(s) 978, 1290, 1401, 1485, 1916
BsaWI WCCGGW 3 cut(s) 571, 918, 1430
BsaXI ACNNNNNCTCC 2 cut(s) 83, 113
Bsc4I CCNNNNNNNGG 4 cut(s) 571, 701, 1091, 1291
Bse118I RCCGGY 2 cut(s) 422, 571
Bse1I ACTGG 4 cut(s) 433, 622, 1559, 1603
Bse3DI GCAATG 4 cut(s) 162, 631, 642, 1792
Bse8I GATNNNNATC 1 cut(s) 1370
BseAI TCCGGA 1 cut(s) 1430
BseBI CCWGG 2 cut(s) 11, 1917
BseDI CCNNGG 5 cut(s) 978, 1290, 1401, 1485, 1916
BseGI GGATG 5 cut(s) 456, 845, 1344, 1555, 1863
BseJI GATNNNNATC 1 cut(s) 1370
BseLI CCNNNNNNNGG 4 cut(s) 571, 701, 1091, 1291
BseMI GCAATG 4 cut(s) 162, 631, 642, 1792
BseMII CTCAG 2 cut(s) 999, 1268
BseNI ACTGG 4 cut(s) 433, 622, 1559, 1603
BseSI GKGCMC 1 cut(s) 1215
BseX3I CGGCCG 1 cut(s) 478
BseXI GCAGC 6 cut(s) 616, 658, 674, 1121, 1551, 1579
BseYI CCCAGC 2 cut(s) 60, 1802
BsgI GTGCAG 1 cut(s) 726
Bsh1236I CGCG 1 cut(s) 980
Bsh1285I CGRYCG 1 cut(s) 481
BshFI GGCC 7 cut(s) 9, 455, 480, 1284, 1406, 1464, 1915
BshNI GGYRCC 2 cut(s) 1210, 1672
BshTI ACCGGT 1 cut(s) 571
BsiEI CGRYCG 1 cut(s) 481
BsiHKAI GWGCWC 1 cut(s) 1718
BsiHKCI CYCGRG 1 cut(s) 1727
BsiSI CCGG 5 cut(s) 423, 572, 919, 1419, 1431
BslFI GGGAC 2 cut(s) 1382, 1908
BslI CCNNNNNNNGG 4 cut(s) 571, 701, 1091, 1291
BsmAI GTCTC 6 cut(s) 566, 731, 1486, 1527, 1652, 1939
BsmBI CGTCTC 1 cut(s) 731
BsmFI GGGAC 2 cut(s) 1382, 1908
BsmI GAATGC 2 cut(s) 1422, 1771
BsnI GGCC 7 cut(s) 9, 455, 480, 1284, 1406, 1464, 1915
Bso31I GGTCTC 3 cut(s) 1527, 1652, 1939
BsoBI CYCGRG 1 cut(s) 1727
Bsp1286I GDGCHC 3 cut(s) 1215, 1686, 1718
Bsp13I TCCGGA 1 cut(s) 1430
Bsp143I GATC 8 cut(s) 176, 589, 709, 727, 822, 1021, 1032, 1365
Bsp1720I GCTNAGC 1 cut(s) 1254
Bsp19I CCATGG 2 cut(s) 1290, 1485
BspACI CCGC 7 cut(s) 137, 344, 399, 978, 980, 985, 1769
BspANI GGCC 7 cut(s) 9, 455, 480, 1284, 1406, 1464, 1915
BspCNI CTCAG 2 cut(s) 1000, 1267
BspEI TCCGGA 1 cut(s) 1430
BspFNI CGCG 1 cut(s) 980
BspLI GGNNCC 5 cut(s) 100, 824, 1212, 1674, 1823
BspMAI CTGCAG 2 cut(s) 676, 1569
BspPI GGATC 4 cut(s) 584, 722, 817, 830
BspT107I GGYRCC 2 cut(s) 1210, 1672
BspTNI GGTCTC 3 cut(s) 1527, 1652, 1939
BsrDI GCAATG 4 cut(s) 162, 631, 642, 1792
BsrFI RCCGGY 2 cut(s) 422, 571
BsrI ACTGG 4 cut(s) 433, 622, 1559, 1603
BssAI RCCGGY 2 cut(s) 422, 571
BssECI CCNNGG 5 cut(s) 978, 1290, 1401, 1485, 1916
BssMI GATC 8 cut(s) 176, 589, 709, 727, 822, 1021, 1032, 1365
BssNI GRCGYC 2 cut(s) 1137, 1458
BssSI CACGAG 1 cut(s) 1361
BssT1I CCWWGG 3 cut(s) 1290, 1401, 1485
Bst2BI CACGAG 1 cut(s) 1361
Bst2UI CCWGG 2 cut(s) 11, 1917
Bst4CI ACNGT 4 cut(s) 52, 95, 541, 1747
BstACI GRCGYC 2 cut(s) 1137, 1458
BstAPI GCANNNNNTGC 2 cut(s) 671, 1778
BstC8I GCNNGC 6 cut(s) 424, 508, 546, 1408, 1783, 1800
BstDEI CTNAG 2 cut(s) 1008, 1254
BstDSI CCRYGG 3 cut(s) 978, 1290, 1485
BstF5I GGATG 5 cut(s) 456, 845, 1344, 1555, 1863
BstFNI CGCG 1 cut(s) 980
BstHHI GCGC 1 cut(s) 1452
BstKTI GATC 8 cut(s) 179, 592, 712, 730, 825, 1024, 1035, 1368
BstMAI GTCTC 6 cut(s) 566, 731, 1486, 1527, 1652, 1939
BstMBI GATC 8 cut(s) 176, 589, 709, 727, 822, 1021, 1032, 1365
BstMCI CGRYCG 1 cut(s) 481
BstMWI GCNNNNNNNGC 6 cut(s) 159, 335, 461, 668, 671, 1778
BstNI CCWGG 2 cut(s) 11, 1917
BstNSI RCATGY 3 cut(s) 1546, 1633, 1781
BstSCI CCNGG 2 cut(s) 9, 1915
BstSFI CTRYAG 3 cut(s) 672, 1445, 1565
BstSLI GKGCMC 1 cut(s) 1215
BstUI CGCG 1 cut(s) 980
BstV1I GCAGC 6 cut(s) 616, 658, 674, 1121, 1551, 1579
BstV2I GAAGAC 1 cut(s) 886
BstX2I RGATCY 3 cut(s) 727, 822, 1021
BstXI CCANNNNNNTGG 3 cut(s) 451, 880, 1492
BstYI RGATCY 3 cut(s) 727, 822, 1021
BstZI CGGCCG 1 cut(s) 478
BsuI GTATCC 1 cut(s) 915
BsuRI GGCC 7 cut(s) 9, 455, 480, 1284, 1406, 1464, 1915
BtgI CCRYGG 3 cut(s) 978, 1290, 1485
BtrI CACGTC 1 cut(s) 1525
BtsCI GGATG 5 cut(s) 456, 845, 1344, 1555, 1863
BtsIMutI CAGTG 4 cut(s) 91, 426, 1566, 1752
Cac8I GCNNGC 6 cut(s) 424, 508, 546, 1408, 1783, 1800
CaiI CAGNNNCTG 1 cut(s) 671
CfoI GCGC 1 cut(s) 1452
Cfr10I RCCGGY 2 cut(s) 422, 571
Cfr13I GGNCC 2 cut(s) 7, 982
Cfr42I CCGCGG 1 cut(s) 981
CpoI CGGWCCG 1 cut(s) 982
CseI GACGC 2 cut(s) 1145, 1447
Csp6I GTAC 4 cut(s) 88, 916, 1606, 1732
CspAI ACCGGT 1 cut(s) 571
CspI CGGWCCG 1 cut(s) 982
CviQI GTAC 4 cut(s) 88, 916, 1606, 1732
DdeI CTNAG 2 cut(s) 1008, 1254
DpnI GATC 8 cut(s) 178, 591, 711, 729, 824, 1023, 1034, 1367
DpnII GATC 8 cut(s) 176, 589, 709, 727, 822, 1021, 1032, 1365
DraIII CACNNNGTG 1 cut(s) 704
EaeI YGGCCR 3 cut(s) 453, 478, 1404
EagI CGGCCG 1 cut(s) 478
Ecl136II GAGCTC 1 cut(s) 1716
EclXI CGGCCG 1 cut(s) 478
Eco130I CCWWGG 3 cut(s) 1290, 1401, 1485
Eco147I AGGCCT 1 cut(s) 1284
Eco24I GRGCYC 2 cut(s) 1686, 1718
Eco31I GGTCTC 3 cut(s) 1527, 1652, 1939
Eco47I GGWCC 1 cut(s) 982
Eco52I CGGCCG 1 cut(s) 478
Eco53kI GAGCTC 1 cut(s) 1716
Eco57I CTGAAG 2 cut(s) 1002, 1723
Eco88I CYCGRG 1 cut(s) 1727
EcoICRI GAGCTC 1 cut(s) 1716
EcoRI GAATTC 1 cut(s) 1067
EcoRII CCWGG 2 cut(s) 9, 1915
EcoT14I CCWWGG 3 cut(s) 1290, 1401, 1485
EcoT22I ATGCAT 1 cut(s) 381
EcoT38I GRGCYC 2 cut(s) 1686, 1718
ErhI CCWWGG 3 cut(s) 1290, 1401, 1485
Esp3I CGTCTC 1 cut(s) 731
FalI AAGNNNNNCTT 2 cut(s) 1041, 1073
FaqI GGGAC 2 cut(s) 1382, 1908
FauI CCCGC 1 cut(s) 130
FbaI TGATCA 1 cut(s) 1365
FblI GTMKAC 1 cut(s) 1380
Fnu4HI GCNGC 9 cut(s) 399, 630, 663, 672, 978, 1110, 1565, 1568, 1770
FokI GGATG 5 cut(s) 443, 852, 1331, 1562, 1870
FriOI GRGCYC 2 cut(s) 1686, 1718
Fsp4HI GCNGC 9 cut(s) 399, 630, 663, 672, 978, 1110, 1565, 1568, 1770
FspBI CTAG 7 cut(s) 74, 150, 527, 776, 942, 1202, 1466
GlaI GCGC 1 cut(s) 1451
GluI GCNGC 9 cut(s) 399, 630, 663, 672, 978, 1110, 1565, 1568, 1770
GsaI CCCAGC 2 cut(s) 64, 1806
GsuI CTGGAG 1 cut(s) 548
HaeIII GGCC 7 cut(s) 9, 455, 480, 1284, 1406, 1464, 1915
HapII CCGG 5 cut(s) 423, 572, 919, 1419, 1431
HgaI GACGC 2 cut(s) 1145, 1447
HhaI GCGC 1 cut(s) 1452
Hin1I GRCGYC 2 cut(s) 1137, 1458
Hin6I GCGC 1 cut(s) 1450
HinP1I GCGC 1 cut(s) 1450
HindIII AAGCTT 2 cut(s) 1050, 1160
HpaII CCGG 5 cut(s) 423, 572, 919, 1419, 1431
HphI GGTGA 7 cut(s) 358, 385, 991, 1165, 1279, 1429, 1627
Hpy166II GTNNAC 4 cut(s) 29, 349, 1381, 1635
Hpy188I TCNGA 5 cut(s) 121, 394, 1021, 1619, 1669
Hpy188III TCNNGA 9 cut(s) 106, 170, 903, 1007, 1363, 1431, 1513, 1696, 1867
Hpy8I GTNNAC 4 cut(s) 29, 349, 1381, 1635
Hpy99I CGWCG 3 cut(s) 524, 893, 1463
HpyAV CCTTC 8 cut(s) 112, 205, 221, 238, 243, 503, 1013, 1026
HpyCH4III ACNGT 4 cut(s) 52, 95, 541, 1747
HpyCH4IV ACGT 3 cut(s) 582, 1524, 1641
HpyF10VI GCNNNNNNNGC 6 cut(s) 159, 335, 461, 668, 671, 1778
HpyF3I CTNAG 2 cut(s) 1008, 1254
HpySE526I ACGT 3 cut(s) 582, 1524, 1641
Hsp92I GRCGYC 2 cut(s) 1137, 1458
HspAI GCGC 1 cut(s) 1450
Kpn2I TCCGGA 1 cut(s) 1430
KroI GCCGGC 1 cut(s) 422
KroNI GCCGGC 1 cut(s) 424
Ksp22I TGATCA 1 cut(s) 1365
KspI CCGCGG 1 cut(s) 981
Kzo9I GATC 8 cut(s) 176, 589, 709, 727, 822, 1021, 1032, 1365
LmnI GCTCC 3 cut(s) 104, 1263, 1713
Lsp1109I GCAGC 6 cut(s) 616, 658, 674, 1121, 1551, 1579
LweI GCATC 3 cut(s) 366, 385, 1540
MaeI CTAG 7 cut(s) 74, 150, 527, 776, 942, 1202, 1466
MaeII ACGT 3 cut(s) 582, 1524, 1641
MaeIII GTNAC 4 cut(s) 355, 578, 613, 1171
MalI GATC 8 cut(s) 178, 591, 711, 729, 824, 1023, 1034, 1367
MboI GATC 8 cut(s) 176, 589, 709, 727, 822, 1021, 1032, 1365
MboII GAAGA 8 cut(s) 466, 591, 751, 886, 1073, 1076, 1729, 1867
MflI RGATCY 3 cut(s) 727, 822, 1021
MhlI GDGCHC 3 cut(s) 1215, 1686, 1718
MlsI TGGCCA 2 cut(s) 455, 1406
MluCI AATT 6 cut(s) 713, 813, 957, 1067, 1113, 1412
MluNI TGGCCA 2 cut(s) 455, 1406
MlyI GAGTC 5 cut(s) 24, 687, 1179, 1234, 1930
MmeI TCCRAC 2 cut(s) 617, 1300
Mox20I TGGCCA 2 cut(s) 455, 1406
Mph1103I ATGCAT 1 cut(s) 381
MroI TCCGGA 1 cut(s) 1430
MroNI GCCGGC 1 cut(s) 422
MroXI GAANNNNTTC 2 cut(s) 1835, 1874
MscI TGGCCA 2 cut(s) 455, 1406
MseI TTAA 2 cut(s) 1116, 1755
MslI CAYNNNNRTG 3 cut(s) 270, 449, 1490
Msp20I TGGCCA 2 cut(s) 455, 1406
MspA1I CMGCKG 3 cut(s) 137, 257, 980
MspI CCGG 5 cut(s) 423, 572, 919, 1419, 1431
MspR9I CCNGG 2 cut(s) 11, 1917
Mva1269I GAATGC 2 cut(s) 1422, 1771
MvaI CCWGG 2 cut(s) 11, 1917
MvnI CGCG 1 cut(s) 980
MwoI GCNNNNNNNGC 6 cut(s) 159, 335, 461, 668, 671, 1778
NaeI GCCGGC 1 cut(s) 424
NcoI CCATGG 2 cut(s) 1290, 1485
NdeII GATC 8 cut(s) 176, 589, 709, 727, 822, 1021, 1032, 1365
NgoMIV GCCGGC 1 cut(s) 422
NlaIV GGNNCC 5 cut(s) 100, 824, 1212, 1674, 1823
NmuCI GTSAC 1 cut(s) 1171
NsiI ATGCAT 1 cut(s) 381
NspI RCATGY 3 cut(s) 1546, 1633, 1781
PceI AGGCCT 1 cut(s) 1284
PciI ACATGT 1 cut(s) 1629
PctI GAATGC 2 cut(s) 1422, 1771
PdiI GCCGGC 1 cut(s) 424
PdmI GAANNNNTTC 2 cut(s) 1835, 1874
PfeI GAWTC 7 cut(s) 109, 483, 1142, 1389, 1434, 1500, 1620
PflMI CCANNNNNTGG 1 cut(s) 701
PinAI ACCGGT 1 cut(s) 571
PkrI GCNGC 9 cut(s) 400, 631, 664, 673, 979, 1111, 1566, 1569, 1771
PleI GAGTC 5 cut(s) 24, 686, 1178, 1234, 1929
PpsI GAGTC 5 cut(s) 24, 686, 1178, 1234, 1929
PscI ACATGT 1 cut(s) 1629
Psp124BI GAGCTC 1 cut(s) 1718
Psp6I CCWGG 2 cut(s) 9, 1915
PspFI CCCAGC 2 cut(s) 60, 1802
PspGI CCWGG 2 cut(s) 9, 1915
PspN4I GGNNCC 5 cut(s) 100, 824, 1212, 1674, 1823
PspPI GGNCC 2 cut(s) 7, 982
PstI CTGCAG 2 cut(s) 676, 1569
PstNI CAGNNNCTG 1 cut(s) 671
PsuI RGATCY 3 cut(s) 727, 822, 1021
PvuII CAGCTG 1 cut(s) 257
RsaI GTAC 4 cut(s) 89, 917, 1607, 1733
RsaNI GTAC 4 cut(s) 88, 916, 1606, 1732
RseI CAYNNNNRTG 3 cut(s) 270, 449, 1490
Rsr2I CGGWCCG 1 cut(s) 982
RsrII CGGWCCG 1 cut(s) 982
SacI GAGCTC 1 cut(s) 1718
SacII CCGCGG 1 cut(s) 981
SaqAI TTAA 2 cut(s) 1116, 1755
SatI GCNGC 9 cut(s) 399, 630, 663, 672, 978, 1110, 1565, 1568, 1770
Sau3AI GATC 8 cut(s) 176, 589, 709, 727, 822, 1021, 1032, 1365
Sau96I GGNCC 2 cut(s) 7, 982
ScaI AGTACT 1 cut(s) 1607
SchI GAGTC 5 cut(s) 24, 687, 1179, 1234, 1930
ScrFI CCNGG 2 cut(s) 11, 1917
SduI GDGCHC 3 cut(s) 1215, 1686, 1718
SfaNI GCATC 3 cut(s) 366, 385, 1540
SfcI CTRYAG 3 cut(s) 672, 1445, 1565
Sfr303I CCGCGG 1 cut(s) 981
SgrBI CCGCGG 1 cut(s) 981
SinI GGWCC 1 cut(s) 982
SmiMI CAYNNNNRTG 3 cut(s) 270, 449, 1490
SmlI CTYRAG 2 cut(s) 168, 1652
SmoI CTYRAG 2 cut(s) 168, 1652
SpeI ACTAGT 1 cut(s) 941
Sse9I AATT 6 cut(s) 713, 813, 957, 1067, 1113, 1412
SseBI AGGCCT 1 cut(s) 1284
SsiI CCGC 7 cut(s) 137, 344, 399, 978, 980, 985, 1769
SspMI CTAG 7 cut(s) 74, 150, 527, 776, 942, 1202, 1466
SstI GAGCTC 1 cut(s) 1718
StuI AGGCCT 1 cut(s) 1284
StyD4I CCNGG 2 cut(s) 9, 1915
StyI CCWWGG 3 cut(s) 1290, 1401, 1485
TaaI ACNGT 4 cut(s) 52, 95, 541, 1747
TaiI ACGT 3 cut(s) 585, 1527, 1644
TaqI TCGA 7 cut(s) 513, 752, 934, 954, 1035, 1182, 1697
TasI AATT 6 cut(s) 713, 813, 957, 1067, 1113, 1412
TatI WGTACW 1 cut(s) 1605
TauI GCSGC 3 cut(s) 401, 980, 1772
TfiI GAWTC 7 cut(s) 109, 483, 1142, 1389, 1434, 1500, 1620
Tru1I TTAA 2 cut(s) 1116, 1755
Tru9I TTAA 2 cut(s) 1116, 1755
TscAI CASTG 4 cut(s) 98, 433, 1566, 1752
TseFI GTSAC 1 cut(s) 1171
TseI GCWGC 6 cut(s) 629, 662, 671, 1109, 1564, 1567
Tsp45I GTSAC 1 cut(s) 1171
TspDTI ATGAA 4 cut(s) 172, 631, 735, 1600
TspRI CASTG 4 cut(s) 98, 433, 1566, 1752
Van91I CCANNNNNTGG 1 cut(s) 701
VpaK11BI GGWCC 1 cut(s) 982
XapI RAATTY 2 cut(s) 1067, 1412
XceI RCATGY 3 cut(s) 1546, 1633, 1781
XmiI GTMKAC 1 cut(s) 1380
XmnI GAANNNNTTC 2 cut(s) 1835, 1874
XspI CTAG 7 cut(s) 74, 150, 527, 776, 942, 1202, 1466
ZrmI AGTACT 1 cut(s) 1607
Zsp2I ATGCAT 1 cut(s) 381
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.