Rh5CG104200

Protein NRT1 PTR FAMILY

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0016782
Physical Location & Seq
Forward (+)
8484055 .. 8486642
2588 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG104200.1

Sequence Viewer

Length: 1773 bp
ATGGAGATGGAAAAGAAGGTTGAGTTTGTTGAAGGAAAGGTGGATTGGAAGGGAAGGACAGCTGTGAAACATAAACATGGAGGAATGAGAACTGCTTTTCTCATACTTGCTACATTTGGTTTTGAGAACATGGCAACTTTGGCTTTGGCGGTGAACTTGGTTACATACTTCAATGGGGTGATGCATTTTGAAATATCTGATGCCGCTAACCAACTTACCAACTTCGCCGGCACTGGTTATATTCTCTCCATTATCATGGCCATCCTTGCAGACACATTCTTCGGCCGATTCAAAACCCTTCTCATTTCAGCTTGCTTCGAGTTCGTCGGGCTAGGATTACTAACCGTGCAAGCTCACTATCCAAGTCTCCAGCCACCGGTCTGTAACGTGTTTGATCCAACTTCTTCTTGCGAGAAAGTTACTGGTGGCAATGCTGCTTTGCTTTTCATTGCTCTCTACATATTGGCAGCAGGAGCTGCAGGAGTCAAAGCTACCTTGCCATCACATGGTGCAGATCAATTTGATGAAAAAGATCCAAAAGAGACGAGGCAGATGTCGAGCTTCTTCAACCTGCTCTTACTAGCAGTATGTCTGGGTGGTGTGGTCAGCCTAACACTAATTGTGTGGATCCAAGACAATAAAGGATGGGATTGGGGATTTGGGATTTCTACAATCGCCATGTTCTTGGGTGTCGTCGTCTTCTTTTCAGGATTGCCTATGTACCGGATACAAGCTATTCGAGGAACTAGTGCAATAATCGAAATTATACAGGTGTATGTTGCCGCGGTCCGCAACAGAAATCTCACCCTTCCTGAGAACCCTTCAGATCTCTATGAGATCGAGGCAGACAAGGAAGCTTCACTTGAAGAAGAATTCCTACATCACAGACCCATTTTCGGCTTCTTGGACAAGGCAGCAATTAAACGAGGGCAAAATGATGACGCCGAATCTCTAAACTCATGGAAGCTTTGCAGAGTCACCCAAGTCGAAAATGCAAAGATAATACTAGGCATGGTGCCCATATTCCTATGCACAATCATAATGACTCTTTGCTTGGCTCAGCTCCAAACCTTTTCAATCCAACAAGGCCTCACCATGGACACAAGCATTACAAAAAACTTCAAAATCCCACCAGCCTCACTCCCCATCATCCCAATCATGTTCCTCGTGATCATAATCCCCGTCTACGACAGAATCTTTGTCCCCTTGGCCAGCAAATTCTCAGGCATTCCCTCCGGAATCACCCATCTACAGCGCATAGGCGTCGGCCTAGTCCTCTCCTGTGTCTCCATGGGCGTGGCTGGAATCATGGAAGTCAAGAGAAAAGACGTGGCGAGAGACCACAACATGCTGGATGCAATCCCAGTGCTGCAGCCACTCCCCATCAGCACATTCTGGCTGTCATTCCAGTACTTCATTTTCGGAATCGCTGACATGTTCACCTACGTCGGTCTCCTTGAGTTTTTCTACTCGGAGGCACCAAAAGGGCTCAAGTCCATCTCGACTTGCTTCCTATGGAGCTCAATGGCACTCGGGTACTTCTTCAGCACAGTGTTGGTTAAGATTGTGAATGCGGCAACACATGGGAGCAATGGGGGTTGGCTGGCTGGGAACAACATCAACAGGAACCACTTGAACCTTTTCTATTGGTTGCTTTCAGGGATGAGCTTCTTGAACTTCTTCCTCTATCTGTTTGTTTCAAGGAGGTATAAGTATAGGCCAGGGAGTCCCATGCTGGTCTCAAAAGATGACAAGAAGGAGGATGAGCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PTR2

Protein Analysis

590

Amino Acids

65.51

Weight (kDa)

7.15

Isoelectric Point (pI)

32.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PTR2 PF00854 97 - 528 2.4e-88 POT family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016782)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06770
malus_domestica MD05G1293900.v1.1 MD10G1271800.v1.1
prunus_persica Prupe.4G070100_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0012361
rosa_laevigata RLG00000031907
rosa_multiflora Rmu_sc0003469.1_g000017
rosa_roxburghii Rroxscaffold_1G00064300
rosa_rugosa Rorug05G0000700
rosa_samantha Rh5AG094900 Rh5BG091200 Rh5CG104200 Rh5DG090600
rosa_wichuraiana Rw5G008300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 579
AccB1I GGYRCC 2 cut(s) 1015, 1477
AccB7I CCANNNNNTGG 1 cut(s) 506
AccI GTMKAC 1 cut(s) 1185
AccII CGCG 1 cut(s) 785
AccIII TCCGGA 1 cut(s) 1235
AciI CCGC 6 cut(s) 149, 204, 783, 785, 790, 1574
AclWI GGATC 4 cut(s) 389, 527, 622, 635
AcoI YGGCCR 3 cut(s) 258, 283, 1209
AcsI RAATTY 2 cut(s) 872, 1217
AcuI CTGAAG 2 cut(s) 807, 1528
AcyI GRCGYC 2 cut(s) 942, 1263
AdeI CACNNNGTG 1 cut(s) 509
AfaI GTAC 3 cut(s) 722, 1412, 1538
AfiI CCNNNNNNNGG 4 cut(s) 376, 506, 896, 1096
AflIII ACRYGT 2 cut(s) 387, 1434
AgeI ACCGGT 1 cut(s) 376
AhlI ACTAGT 1 cut(s) 746
AjiI CACGTC 1 cut(s) 1330
AjnI CCWGG 1 cut(s) 1720
AjuI GAANNNNNNNTTGG 2 cut(s) 28, 60
Alw21I GWGCWC 2 cut(s) 1523, 1770
Alw26I GTCTC 6 cut(s) 371, 536, 1291, 1332, 1457, 1744
AlwI GGATC 4 cut(s) 389, 527, 622, 635
AlwNI CAGNNNCTG 1 cut(s) 476
Ama87I CYCGRG 1 cut(s) 1532
Aor13HI TCCGGA 1 cut(s) 1235
AoxI GGCC 6 cut(s) 258, 283, 1087, 1209, 1267, 1718
ApeKI GCWGC 6 cut(s) 434, 467, 476, 914, 1369, 1372
ApoI RAATTY 2 cut(s) 872, 1217
ArsI GACNNNNNNTTYG 4 cut(s) 263, 295, 1181, 1213
AsiGI ACCGGT 1 cut(s) 376
Asp700I GAANNNNTTC 2 cut(s) 1640, 1679
AspLEI GCGC 1 cut(s) 1257
AspS9I GGNCC 1 cut(s) 787
AsuHPI GGTGA 7 cut(s) 163, 190, 796, 970, 1084, 1234, 1432
AvaI CYCGRG 1 cut(s) 1532
AvaII GGWCC 1 cut(s) 787
BaeGI GKGCMC 1 cut(s) 1020
BalI TGGCCA 2 cut(s) 260, 1211
BamHI GGATCC 1 cut(s) 627
BanI GGYRCC 2 cut(s) 1015, 1477
BanII GRGCYC 3 cut(s) 1491, 1523, 1770
BarI GAAGNNNNNNTAC 2 cut(s) 861, 893
BauI CACGAG 1 cut(s) 1166
BbsI GAAGAC 1 cut(s) 691
Bbv12I GWGCWC 2 cut(s) 1523, 1770
BbvI GCAGC 6 cut(s) 421, 463, 479, 926, 1356, 1384
BccI CCATC 7 cut(s) 269, 508, 639, 1154, 1254, 1391, 1505
BcgI CGANNNNNNTGC 2 cut(s) 1246, 1280
BciT130I CCWGG 1 cut(s) 1722
BciVI GTATCC 1 cut(s) 720
BclI TGATCA 1 cut(s) 1170
BcoDI GTCTC 6 cut(s) 371, 536, 1291, 1332, 1457, 1744
BcuI ACTAGT 1 cut(s) 746
BfaI CTAG 5 cut(s) 332, 581, 747, 1007, 1271
BfmI CTRYAG 3 cut(s) 477, 1250, 1370
BfuAI ACCTGC 1 cut(s) 579
BfuI GTATCC 1 cut(s) 720
BglII AGATCT 1 cut(s) 826
BisI GCNGC 9 cut(s) 204, 435, 468, 477, 783, 915, 1370, 1373, 1575
BlpI GCTNAGC 1 cut(s) 1059
BlsI GCNGC 9 cut(s) 205, 436, 469, 478, 784, 916, 1371, 1374, 1576
BmcAI AGTACT 1 cut(s) 1412
Bme1390I CCNGG 1 cut(s) 1722
Bme18I GGWCC 1 cut(s) 787
BmeT110I CYCGRG 1 cut(s) 1532
BmgBI CACGTC 1 cut(s) 1330
BmgT120I GGNCC 1 cut(s) 787
BmiI GGNNCC 4 cut(s) 629, 1017, 1479, 1628
BmrFI CCNGG 1 cut(s) 1722
BmrI ACTGGG 1 cut(s) 1358
BmsI GCATC 3 cut(s) 171, 190, 1345
BmuI ACTGGG 1 cut(s) 1358
BpiI GAAGAC 1 cut(s) 691
BpmI CTGGAG 1 cut(s) 353
Bpu1102I GCTNAGC 1 cut(s) 1059
BpuEI CTTGAG 2 cut(s) 1475, 1478
BsaBI GATNNNNATC 1 cut(s) 1175
BsaHI GRCGYC 2 cut(s) 942, 1263
BsaI GGTCTC 3 cut(s) 1332, 1457, 1744
BsaJI CCNNGG 5 cut(s) 783, 1095, 1206, 1290, 1721
BsaWI WCCGGW 3 cut(s) 376, 723, 1235
Bsc4I CCNNNNNNNGG 4 cut(s) 376, 506, 896, 1096
Bse118I RCCGGY 2 cut(s) 227, 376
Bse1I ACTGG 4 cut(s) 238, 427, 1364, 1408
Bse3DI GCAATG 3 cut(s) 436, 447, 1597
Bse8I GATNNNNATC 1 cut(s) 1175
BseAI TCCGGA 1 cut(s) 1235
BseBI CCWGG 1 cut(s) 1722
BseDI CCNNGG 5 cut(s) 783, 1095, 1206, 1290, 1721
BseGI GGATG 6 cut(s) 261, 650, 1149, 1360, 1668, 1768
BseJI GATNNNNATC 1 cut(s) 1175
BseLI CCNNNNNNNGG 4 cut(s) 376, 506, 896, 1096
BseMI GCAATG 3 cut(s) 436, 447, 1597
BseMII CTCAG 3 cut(s) 804, 1073, 1236
BseNI ACTGG 4 cut(s) 238, 427, 1364, 1408
BseSI GKGCMC 1 cut(s) 1020
BseX3I CGGCCG 1 cut(s) 283
BseXI GCAGC 6 cut(s) 421, 463, 479, 926, 1356, 1384
BseYI CCCAGC 1 cut(s) 1607
BsgI GTGCAG 1 cut(s) 531
Bsh1236I CGCG 1 cut(s) 785
Bsh1285I CGRYCG 1 cut(s) 286
BshFI GGCC 6 cut(s) 260, 285, 1089, 1211, 1269, 1720
BshNI GGYRCC 2 cut(s) 1015, 1477
BshTI ACCGGT 1 cut(s) 376
BsiEI CGRYCG 1 cut(s) 286
BsiHKAI GWGCWC 2 cut(s) 1523, 1770
BsiHKCI CYCGRG 1 cut(s) 1532
BsiSI CCGG 4 cut(s) 228, 377, 724, 1236
BslFI GGGAC 2 cut(s) 1187, 1713
BslI CCNNNNNNNGG 4 cut(s) 376, 506, 896, 1096
BsmAI GTCTC 6 cut(s) 371, 536, 1291, 1332, 1457, 1744
BsmBI CGTCTC 1 cut(s) 536
BsmFI GGGAC 2 cut(s) 1187, 1713
BsmI GAATGC 2 cut(s) 1227, 1576
BsnI GGCC 6 cut(s) 260, 285, 1089, 1211, 1269, 1720
Bso31I GGTCTC 3 cut(s) 1332, 1457, 1744
BsoBI CYCGRG 1 cut(s) 1532
Bsp1286I GDGCHC 4 cut(s) 1020, 1491, 1523, 1770
Bsp13I TCCGGA 1 cut(s) 1235
Bsp143I GATC 7 cut(s) 394, 514, 532, 627, 826, 837, 1170
Bsp1720I GCTNAGC 1 cut(s) 1059
Bsp19I CCATGG 2 cut(s) 1095, 1290
BspACI CCGC 6 cut(s) 149, 204, 783, 785, 790, 1574
BspANI GGCC 6 cut(s) 260, 285, 1089, 1211, 1269, 1720
BspCNI CTCAG 3 cut(s) 805, 1072, 1235
BspEI TCCGGA 1 cut(s) 1235
BspFNI CGCG 1 cut(s) 785
BspLI GGNNCC 4 cut(s) 629, 1017, 1479, 1628
BspMAI CTGCAG 2 cut(s) 481, 1374
BspMI ACCTGC 1 cut(s) 579
BspPI GGATC 4 cut(s) 389, 527, 622, 635
BspT107I GGYRCC 2 cut(s) 1015, 1477
BspTNI GGTCTC 3 cut(s) 1332, 1457, 1744
BsrDI GCAATG 3 cut(s) 436, 447, 1597
BsrFI RCCGGY 2 cut(s) 227, 376
BsrI ACTGG 4 cut(s) 238, 427, 1364, 1408
BssAI RCCGGY 2 cut(s) 227, 376
BssECI CCNNGG 5 cut(s) 783, 1095, 1206, 1290, 1721
BssMI GATC 7 cut(s) 394, 514, 532, 627, 826, 837, 1170
BssNI GRCGYC 2 cut(s) 942, 1263
BssSI CACGAG 1 cut(s) 1166
BssT1I CCWWGG 3 cut(s) 1095, 1206, 1290
Bst2BI CACGAG 1 cut(s) 1166
Bst2UI CCWGG 1 cut(s) 1722
Bst4CI ACNGT 2 cut(s) 346, 1552
BstACI GRCGYC 2 cut(s) 942, 1263
BstAPI GCANNNNNTGC 1 cut(s) 476
BstC8I GCNNGC 5 cut(s) 229, 313, 351, 1213, 1605
BstDEI CTNAG 3 cut(s) 813, 1059, 1222
BstDSI CCRYGG 3 cut(s) 783, 1095, 1290
BstF5I GGATG 6 cut(s) 261, 650, 1149, 1360, 1668, 1768
BstFNI CGCG 1 cut(s) 785
BstHHI GCGC 1 cut(s) 1257
BstKTI GATC 7 cut(s) 397, 517, 535, 630, 829, 840, 1173
BstMAI GTCTC 6 cut(s) 371, 536, 1291, 1332, 1457, 1744
BstMBI GATC 7 cut(s) 394, 514, 532, 627, 826, 837, 1170
BstMCI CGRYCG 1 cut(s) 286
BstMWI GCNNNNNNNGC 4 cut(s) 140, 266, 473, 476
BstNI CCWGG 1 cut(s) 1722
BstNSI RCATGY 2 cut(s) 1351, 1438
BstSCI CCNGG 1 cut(s) 1720
BstSFI CTRYAG 3 cut(s) 477, 1250, 1370
BstSLI GKGCMC 1 cut(s) 1020
BstUI CGCG 1 cut(s) 785
BstV1I GCAGC 6 cut(s) 421, 463, 479, 926, 1356, 1384
BstV2I GAAGAC 1 cut(s) 691
BstX2I RGATCY 3 cut(s) 532, 627, 826
BstXI CCANNNNNNTGG 3 cut(s) 256, 685, 1297
BstYI RGATCY 3 cut(s) 532, 627, 826
BstZI CGGCCG 1 cut(s) 283
BsuI GTATCC 1 cut(s) 720
BsuRI GGCC 6 cut(s) 260, 285, 1089, 1211, 1269, 1720
BtgI CCRYGG 3 cut(s) 783, 1095, 1290
BtrI CACGTC 1 cut(s) 1330
BtsCI GGATG 6 cut(s) 261, 650, 1149, 1360, 1668, 1768
BtsIMutI CAGTG 3 cut(s) 231, 1371, 1557
BveI ACCTGC 1 cut(s) 579
Cac8I GCNNGC 5 cut(s) 229, 313, 351, 1213, 1605
CaiI CAGNNNCTG 1 cut(s) 476
CfoI GCGC 1 cut(s) 1257
Cfr10I RCCGGY 2 cut(s) 227, 376
Cfr13I GGNCC 1 cut(s) 787
Cfr42I CCGCGG 1 cut(s) 786
CpoI CGGWCCG 1 cut(s) 787
CseI GACGC 2 cut(s) 950, 1252
Csp6I GTAC 3 cut(s) 721, 1411, 1537
CspAI ACCGGT 1 cut(s) 376
CspI CGGWCCG 1 cut(s) 787
CviQI GTAC 3 cut(s) 721, 1411, 1537
DdeI CTNAG 3 cut(s) 813, 1059, 1222
DpnI GATC 7 cut(s) 396, 516, 534, 629, 828, 839, 1172
DpnII GATC 7 cut(s) 394, 514, 532, 627, 826, 837, 1170
DraIII CACNNNGTG 1 cut(s) 509
EaeI YGGCCR 3 cut(s) 258, 283, 1209
EagI CGGCCG 1 cut(s) 283
Ecl136II GAGCTC 2 cut(s) 1521, 1768
EclXI CGGCCG 1 cut(s) 283
Eco130I CCWWGG 3 cut(s) 1095, 1206, 1290
Eco147I AGGCCT 1 cut(s) 1089
Eco24I GRGCYC 3 cut(s) 1491, 1523, 1770
Eco31I GGTCTC 3 cut(s) 1332, 1457, 1744
Eco47I GGWCC 1 cut(s) 787
Eco52I CGGCCG 1 cut(s) 283
Eco53kI GAGCTC 2 cut(s) 1521, 1768
Eco57I CTGAAG 2 cut(s) 807, 1528
Eco88I CYCGRG 1 cut(s) 1532
EcoICRI GAGCTC 2 cut(s) 1521, 1768
EcoRI GAATTC 1 cut(s) 872
EcoRII CCWGG 1 cut(s) 1720
EcoT14I CCWWGG 3 cut(s) 1095, 1206, 1290
EcoT22I ATGCAT 1 cut(s) 186
EcoT38I GRGCYC 3 cut(s) 1491, 1523, 1770
ErhI CCWWGG 3 cut(s) 1095, 1206, 1290
Esp3I CGTCTC 1 cut(s) 536
FalI AAGNNNNNCTT 2 cut(s) 846, 878
FaqI GGGAC 2 cut(s) 1187, 1713
FbaI TGATCA 1 cut(s) 1170
FblI GTMKAC 1 cut(s) 1185
Fnu4HI GCNGC 9 cut(s) 204, 435, 468, 477, 783, 915, 1370, 1373, 1575
FokI GGATG 5 cut(s) 248, 657, 1136, 1367, 1675
FriOI GRGCYC 3 cut(s) 1491, 1523, 1770
Fsp4HI GCNGC 9 cut(s) 204, 435, 468, 477, 783, 915, 1370, 1373, 1575
FspBI CTAG 5 cut(s) 332, 581, 747, 1007, 1271
GlaI GCGC 1 cut(s) 1256
GluI GCNGC 9 cut(s) 204, 435, 468, 477, 783, 915, 1370, 1373, 1575
GsaI CCCAGC 1 cut(s) 1611
GsuI CTGGAG 1 cut(s) 353
HaeIII GGCC 6 cut(s) 260, 285, 1089, 1211, 1269, 1720
HapII CCGG 4 cut(s) 228, 377, 724, 1236
HgaI GACGC 2 cut(s) 950, 1252
HhaI GCGC 1 cut(s) 1257
Hin1I GRCGYC 2 cut(s) 942, 1263
Hin6I GCGC 1 cut(s) 1255
HinP1I GCGC 1 cut(s) 1255
HindIII AAGCTT 2 cut(s) 855, 965
HpaII CCGG 4 cut(s) 228, 377, 724, 1236
HphI GGTGA 7 cut(s) 163, 190, 796, 970, 1084, 1234, 1432
Hpy166II GTNNAC 3 cut(s) 154, 1186, 1440
Hpy188I TCNGA 4 cut(s) 199, 826, 1424, 1474
Hpy188III TCNNGA 7 cut(s) 708, 812, 1168, 1236, 1318, 1501, 1672
Hpy8I GTNNAC 3 cut(s) 154, 1186, 1440
Hpy99I CGWCG 4 cut(s) 329, 698, 1268, 1451
HpyAV CCTTC 8 cut(s) 10, 26, 43, 48, 308, 818, 831, 1750
HpyCH4III ACNGT 2 cut(s) 346, 1552
HpyCH4IV ACGT 3 cut(s) 387, 1329, 1446
HpyF10VI GCNNNNNNNGC 4 cut(s) 140, 266, 473, 476
HpyF3I CTNAG 3 cut(s) 813, 1059, 1222
HpySE526I ACGT 3 cut(s) 387, 1329, 1446
Hsp92I GRCGYC 2 cut(s) 942, 1263
HspAI GCGC 1 cut(s) 1255
Kpn2I TCCGGA 1 cut(s) 1235
KroI GCCGGC 1 cut(s) 227
KroNI GCCGGC 1 cut(s) 229
Ksp22I TGATCA 1 cut(s) 1170
KspI CCGCGG 1 cut(s) 786
Kzo9I GATC 7 cut(s) 394, 514, 532, 627, 826, 837, 1170
LmnI GCTCC 4 cut(s) 473, 1068, 1518, 1587
Lsp1109I GCAGC 6 cut(s) 421, 463, 479, 926, 1356, 1384
LweI GCATC 3 cut(s) 171, 190, 1345
MaeI CTAG 5 cut(s) 332, 581, 747, 1007, 1271
MaeII ACGT 3 cut(s) 387, 1329, 1446
MaeIII GTNAC 4 cut(s) 160, 383, 418, 976
MalI GATC 7 cut(s) 396, 516, 534, 629, 828, 839, 1172
MboI GATC 7 cut(s) 394, 514, 532, 627, 826, 837, 1170
MboII GAAGA 8 cut(s) 271, 396, 556, 691, 878, 881, 1534, 1672
MflI RGATCY 3 cut(s) 532, 627, 826
MhlI GDGCHC 4 cut(s) 1020, 1491, 1523, 1770
MlsI TGGCCA 2 cut(s) 260, 1211
MluCI AATT 6 cut(s) 518, 618, 762, 872, 918, 1217
MluNI TGGCCA 2 cut(s) 260, 1211
MlyI GAGTC 4 cut(s) 492, 984, 1039, 1735
MmeI TCCRAC 2 cut(s) 422, 1105
Mox20I TGGCCA 2 cut(s) 260, 1211
Mph1103I ATGCAT 1 cut(s) 186
MroI TCCGGA 1 cut(s) 1235
MroNI GCCGGC 1 cut(s) 227
MroXI GAANNNNTTC 2 cut(s) 1640, 1679
MscI TGGCCA 2 cut(s) 260, 1211
MseI TTAA 2 cut(s) 921, 1560
MslI CAYNNNNRTG 3 cut(s) 75, 254, 1295
Msp20I TGGCCA 2 cut(s) 260, 1211
MspA1I CMGCKG 2 cut(s) 62, 785
MspI CCGG 4 cut(s) 228, 377, 724, 1236
MspR9I CCNGG 1 cut(s) 1722
Mva1269I GAATGC 2 cut(s) 1227, 1576
MvaI CCWGG 1 cut(s) 1722
MvnI CGCG 1 cut(s) 785
MwoI GCNNNNNNNGC 4 cut(s) 140, 266, 473, 476
NaeI GCCGGC 1 cut(s) 229
NcoI CCATGG 2 cut(s) 1095, 1290
NdeII GATC 7 cut(s) 394, 514, 532, 627, 826, 837, 1170
NgoMIV GCCGGC 1 cut(s) 227
NlaIV GGNNCC 4 cut(s) 629, 1017, 1479, 1628
NmuCI GTSAC 1 cut(s) 976
NsiI ATGCAT 1 cut(s) 186
NspI RCATGY 2 cut(s) 1351, 1438
PceI AGGCCT 1 cut(s) 1089
PciI ACATGT 1 cut(s) 1434
PctI GAATGC 2 cut(s) 1227, 1576
PdiI GCCGGC 1 cut(s) 229
PdmI GAANNNNTTC 2 cut(s) 1640, 1679
PfeI GAWTC 6 cut(s) 288, 947, 1194, 1239, 1305, 1425
PflMI CCANNNNNTGG 1 cut(s) 506
PinAI ACCGGT 1 cut(s) 376
PkrI GCNGC 9 cut(s) 205, 436, 469, 478, 784, 916, 1371, 1374, 1576
PleI GAGTC 4 cut(s) 491, 983, 1039, 1734
PpsI GAGTC 4 cut(s) 491, 983, 1039, 1734
PscI ACATGT 1 cut(s) 1434
Psp124BI GAGCTC 2 cut(s) 1523, 1770
Psp6I CCWGG 1 cut(s) 1720
PspFI CCCAGC 1 cut(s) 1607
PspGI CCWGG 1 cut(s) 1720
PspN4I GGNNCC 4 cut(s) 629, 1017, 1479, 1628
PspPI GGNCC 1 cut(s) 787
PstI CTGCAG 2 cut(s) 481, 1374
PstNI CAGNNNCTG 1 cut(s) 476
PsuI RGATCY 3 cut(s) 532, 627, 826
PvuII CAGCTG 1 cut(s) 62
RsaI GTAC 3 cut(s) 722, 1412, 1538
RsaNI GTAC 3 cut(s) 721, 1411, 1537
RseI CAYNNNNRTG 3 cut(s) 75, 254, 1295
Rsr2I CGGWCCG 1 cut(s) 787
RsrII CGGWCCG 1 cut(s) 787
SacI GAGCTC 2 cut(s) 1523, 1770
SacII CCGCGG 1 cut(s) 786
SaqAI TTAA 2 cut(s) 921, 1560
SatI GCNGC 9 cut(s) 204, 435, 468, 477, 783, 915, 1370, 1373, 1575
Sau3AI GATC 7 cut(s) 394, 514, 532, 627, 826, 837, 1170
Sau96I GGNCC 1 cut(s) 787
ScaI AGTACT 1 cut(s) 1412
SchI GAGTC 4 cut(s) 492, 984, 1039, 1735
ScrFI CCNGG 1 cut(s) 1722
SduI GDGCHC 4 cut(s) 1020, 1491, 1523, 1770
SfaNI GCATC 3 cut(s) 171, 190, 1345
SfcI CTRYAG 3 cut(s) 477, 1250, 1370
Sfr303I CCGCGG 1 cut(s) 786
SgrBI CCGCGG 1 cut(s) 786
SinI GGWCC 1 cut(s) 787
SmiMI CAYNNNNRTG 3 cut(s) 75, 254, 1295
SmlI CTYRAG 2 cut(s) 1457, 1490
SmoI CTYRAG 2 cut(s) 1457, 1490
SpeI ACTAGT 1 cut(s) 746
Sse9I AATT 6 cut(s) 518, 618, 762, 872, 918, 1217
SseBI AGGCCT 1 cut(s) 1089
SsiI CCGC 6 cut(s) 149, 204, 783, 785, 790, 1574
SspMI CTAG 5 cut(s) 332, 581, 747, 1007, 1271
SstI GAGCTC 2 cut(s) 1523, 1770
StuI AGGCCT 1 cut(s) 1089
StyD4I CCNGG 1 cut(s) 1720
StyI CCWWGG 3 cut(s) 1095, 1206, 1290
TaaI ACNGT 2 cut(s) 346, 1552
TaiI ACGT 3 cut(s) 390, 1332, 1449
TaqI TCGA 7 cut(s) 318, 557, 739, 759, 840, 987, 1502
TaqII GACCGA 1 cut(s) 1439
TasI AATT 6 cut(s) 518, 618, 762, 872, 918, 1217
TatI WGTACW 1 cut(s) 1410
TauI GCSGC 3 cut(s) 206, 785, 1577
TfiI GAWTC 6 cut(s) 288, 947, 1194, 1239, 1305, 1425
Tru1I TTAA 2 cut(s) 921, 1560
Tru9I TTAA 2 cut(s) 921, 1560
TscAI CASTG 3 cut(s) 238, 1371, 1557
TseFI GTSAC 1 cut(s) 976
TseI GCWGC 6 cut(s) 434, 467, 476, 914, 1369, 1372
Tsp45I GTSAC 1 cut(s) 976
TspDTI ATGAA 3 cut(s) 436, 540, 1405
TspRI CASTG 3 cut(s) 238, 1371, 1557
Van91I CCANNNNNTGG 1 cut(s) 506
VpaK11BI GGWCC 1 cut(s) 787
XapI RAATTY 2 cut(s) 872, 1217
XceI RCATGY 2 cut(s) 1351, 1438
XmiI GTMKAC 1 cut(s) 1185
XmnI GAANNNNTTC 2 cut(s) 1640, 1679
XspI CTAG 5 cut(s) 332, 581, 747, 1007, 1271
ZrmI AGTACT 1 cut(s) 1412
Zsp2I ATGCAT 1 cut(s) 186
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.