Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0004966

Physical Location & Seq

Genomic Coordinates Reverse (-)

44434546 .. 44439374

Gene Structure 4829 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1314100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1515 bp

ATGGACGCGCTGCAATGGAGGATATTGCCGGTGCTTACACTGATCGCTTCTTTCCTACTATTTTTCTATTTCCAGTATCCCTCCCAGCAATATCCGAAAAACTGCAGCCTGCTGCCTTTCCAACATTATTGGATCGCCAGCAAGCGCATTGTGACACCTCAAGGGGTTATTTCTGGAGCAGTTGAGATTAAGGATGGGAAGATTGCCTCAATTGTTAAAGAAGAGGAAAAGCATGGGAAGATCAAGTCGGAAAATGTGATTGATTACGGAGAGGCCGTTGTCATGCCTGGCCTGATTGATGTGCATGCACATCTCGACGATCCTGGAAGAGCTGAATGGGAAGGATTTCCTTCCGGAACTAAAGCTGCTGCTGCTGGTGGGATAACAACATTGGTTGACATGCCTCTGAATAGTGACCCATCGACTGTCTCCAGAGAGACTTTGGAACTCAAGATTAAGGCCGCCGAGAGCAGAATTTACGTTGATGTTGGCTTTTGGGGAGGGCTTGTTCCTGAAAACGCGTTCAATGCATCTGCTCTCGAGGACCTCCTAGATGCCGGCGTTCTTGGTCTAAAGTCTTTTATGTGTCCATCCGGGATCAACGACTTTCCTATGACAAATGCCAGTCACATTAAGGGACTGTCTGTACTAGCGAAATACAGAAGGCCTTTACTTGTACATGCTGAGAAAGAACAAGAACTCGAAAGCAACTTGGGAGTTGAAGATGGTAGTAACAATCCTCGTTCTTATTCAACATATCTCAAGACCAGGCCACCTTCGTGGGAAGAGGCAGCAATTAAGGATCTCTTGACCTTGACAAAGGACACAAGGATTGGTGGCCCGGCAGAAGGAGCTCATCTTCACATTGTTCACTTGTCAGACTCGCGCTCTTCATTAGATCTTATTAAGGAAGCGAAAAGTGGCGGTGATAGTTTAACTGTTGAGACATGCCCTCACTACTTAGCTTTCTCAGCCGAAGAGATTCCCGATGGAGATACGCGTTTCAAATGTTCTCCACCCATCCGCGATGCAGCCAACAAGGAAAAACTGTGGGAGGCTTTGTTGGAGGGACACGTTGACATGCTAAGCTCTGATCACTCACCAACCATGCCGGAACTTAAGCTTCTCGACGGTGGAGACTTTTTGAAAGCTTGGGGTGGCATATCATCTCTGCAGTTTGTTCTTCCTGTGACATGGTCATATGGCCAGAAATATGGAGTGACATTACAACAGTTAGCTTTATGGTGGAGCGAAAGGCCGGCCAGGCTCGCTGGACAAAAATTGAAGGGGGCAATTGCAGTAGGGAATCACGCGGATATCGTAGTATGGGATCCAGATGTGGAATTCGACCTCGATGATGAATTCCCCATGCACGTCAAACACCCAGGTATTTCAGCTTACTTGGGGACAAAGTTATCCGGAAGAGTTGCAGCCACATTTGTAAGAGGAAACCTTGTCTTCGAAGAGGGGAAACATGCTCCCGCAGTCTGCGGCGTTCCAATTCTGGCAAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000255 GO:0000256 GO:0003674 GO:0003824 GO:0004038 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006139 GO:0006144 GO:0006145 GO:0006725 GO:0006807 GO:0006950 GO:0006995 GO:0007154 GO:0008150 GO:0008152 GO:0009056 GO:0009112 GO:0009267 GO:0009605 GO:0009987 GO:0009991 GO:0010135 GO:0010136 GO:0012505 GO:0016787 GO:0016810 GO:0016812 GO:0017144 GO:0019439 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0034641 GO:0042594 GO:0042737 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043562 GO:0043603 GO:0043605 GO:0044237 GO:0044238 GO:0044248 GO:0044270 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046113 GO:0046483 GO:0046700 GO:0050896 GO:0051716 GO:0055086 GO:0071496 GO:0071704 GO:0072521 GO:0072523 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00230 ko01100 ko01120 map00230 map01100 map01120

Pfam Domains

Protein Families

Amidohydro_1

Protein Analysis

505

Amino Acids

55.11

Weight (kDa)

5.43

Isoelectric Point (pI)

37.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ALN_composite	PF24890	38 - 92	4.5e-31	Allantoinase, composite domain
Amidohydro_1	PF01979	93 - 486	5.2e-23	Amidohydrolase family
DHOase	PF12890	93 - 293	6.5e-08	Dihydro-orotase-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004966)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G04955 AT4G04955
fragaria_vesca	FvH4_3g09410 FvH4_3g09410 FvH4_3g09410 FvH4_3g09410
malus_domestica	MD00G1095000.v1.1 MD05G1314100.v1.1
prunus_persica	Prupe.4G045000_v2.0.a1
pyrus_communis	pycom05g29210
rosa_chinensis	RchiOBHm_Chr5g0008181
rosa_laevigata	RLG00000031540 RLG00000031544
rosa_multiflora	Rmu_sc0001352.1_g000006 Rmu_sc0001352.1_g000028 Rmu_sc0001626.1_g000019
rosa_roxburghii	Rroxscaffold_1G00068300
rosa_rugosa	Rorug03G0302600 Rorug04G0433600 Rorug04G0433700 Rorug04G0433800 Rorug04G0433900 Rorug04G0433900
rosa_samantha	Rh4AG007300 Rh4AG211200 Rh5AG062500 Rh5BG058600 Rh5CG069000 Rh5DG057900
rosa_wichuraiana	Rw5G005860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	6 cut(s)	8, 521, 886, 1000, 1026, 1313
AccIII	TCCGGA	2 cut(s)	353, 1418
AciI	CCGC	6 cut(s)	462, 924, 1024, 1313, 1482, 1491
AclWI	GGATC	6 cut(s)	140, 314, 605, 810, 1325, 1338
AcoI	YGGCCR	2 cut(s)	1204, 1260
AcsI	RAATTY	3 cut(s)	474, 1343, 1361
AfaI	GTAC	2 cut(s)	648, 678
AfiI	CCNNNNNNNGG	1 cut(s)	848
AflII	CTTAAG	1 cut(s)	1118
AflIII	ACRYGT	3 cut(s)	519, 998, 1072
AgsI	TTSAA	6 cut(s)	526, 722, 753, 1006, 1147, 1285
AjiI	CACGTC	1 cut(s)	1375
AjnI	CCWGG	5 cut(s)	286, 322, 767, 1262, 1384
AleI	CACNNNNGTG	1 cut(s)	778
AloI	GAACNNNNNNTCC	2 cut(s)	492, 524
Alw21I	GWGCWC	1 cut(s)	856
Alw26I	GTCTC	4 cut(s)	431, 433, 938, 1131
AlwI	GGATC	6 cut(s)	140, 314, 605, 810, 1325, 1338
Ama87I	CYCGRG	1 cut(s)	539
Aor13HI	TCCGGA	2 cut(s)	353, 1418
AoxI	GGCC	9 cut(s)	273, 289, 459, 665, 770, 838, 1204, 1256, 1260
ApeKI	GCWGC	9 cut(s)	10, 105, 112, 365, 368, 371, 791, 1031, 1430
ApoI	RAATTY	3 cut(s)	474, 1343, 1361
Asp700I	GAANNNNTTC	2 cut(s)	345, 981
AspLEI	GCGC	3 cut(s)	10, 147, 888
AspS9I	GGNCC	2 cut(s)	544, 839
AsuC2I	CCSGG	2 cut(s)	595, 842
AsuHPI	GGTGA	2 cut(s)	938, 1092
AsuII	TTCGAA	1 cut(s)	1461
AvaI	CYCGRG	1 cut(s)	539
AvaII	GGWCC	1 cut(s)	544
BalI	TGGCCA	1 cut(s)	1206
BamHI	GGATCC	1 cut(s)	1330
BanII	GRGCYC	1 cut(s)	856
BbsI	GAAGAC	1 cut(s)	1450
Bbv12I	GWGCWC	1 cut(s)	856
BbvI	GCAGC	8 cut(s)	99, 117, 352, 355, 358, 803, 1043, 1442
BccI	CCATC	6 cut(s)	188, 427, 598, 719, 983, 1028
BceAI	ACGGC	1 cut(s)	260
BciT130I	CCWGG	5 cut(s)	288, 324, 769, 1264, 1386
BciVI	GTATCC	1 cut(s)	87
BclI	TGATCA	1 cut(s)	1093
BcnI	CCSGG	2 cut(s)	595, 842
BcoDI	GTCTC	4 cut(s)	431, 433, 938, 1131
BfaI	CTAG	2 cut(s)	551, 650
BfmI	CTRYAG	2 cut(s)	103, 1172
BfrI	CTTAAG	1 cut(s)	1118
BfuI	GTATCC	1 cut(s)	87
BglI	GCCNNNNNGGC	1 cut(s)	1264
BglII	AGATCT	1 cut(s)	898
BlpI	GCTNAGC	1 cut(s)	1085
Bme1390I	CCNGG	7 cut(s)	288, 324, 595, 769, 842, 1264, 1386
Bme18I	GGWCC	1 cut(s)	544
BmeT110I	CYCGRG	1 cut(s)	539
BmgBI	CACGTC	1 cut(s)	1375
BmgT120I	GGNCC	2 cut(s)	544, 839
BmiI	GGNNCC	1 cut(s)	1332
BmrFI	CCNGG	7 cut(s)	288, 324, 595, 769, 842, 1264, 1386
BmsI	GCATC	3 cut(s)	539, 544, 1018
BpiI	GAAGAC	1 cut(s)	1450
BpmI	CTGGAG	2 cut(s)	195, 415
Bpu1102I	GCTNAGC	1 cut(s)	1085
Bpu14I	TTCGAA	1 cut(s)	1461
BpuEI	CTTGAG	3 cut(s)	144, 434, 746
BpuMI	CCSGG	2 cut(s)	595, 842
BsaJI	CCNNGG	1 cut(s)	1384
BsaWI	WCCGGW	2 cut(s)	353, 1418
BsaXI	ACNNNNNCTCC	6 cut(s)	261, 291, 492, 522, 1046, 1076
Bsc4I	CCNNNNNNNGG	1 cut(s)	848
Bse118I	RCCGGY	3 cut(s)	28, 557, 1258
Bse1I	ACTGG	2 cut(s)	73, 624
Bse3DI	GCAATG	1 cut(s)	20
BseAI	TCCGGA	2 cut(s)	353, 1418
BseBI	CCWGG	5 cut(s)	288, 324, 769, 1264, 1386
BseDI	CCNNGG	1 cut(s)	1384
BseGI	GGATG	3 cut(s)	199, 590, 1020
BseLI	CCNNNNNNNGG	1 cut(s)	848
BseMI	GCAATG	1 cut(s)	20
BseMII	CTCAG	2 cut(s)	675, 984
BseNI	ACTGG	2 cut(s)	73, 624
BseXI	GCAGC	8 cut(s)	99, 117, 352, 355, 358, 803, 1043, 1442
BseYI	CCCAGC	1 cut(s)	84
Bsh1236I	CGCG	6 cut(s)	8, 521, 886, 1000, 1026, 1313
BshFI	GGCC	9 cut(s)	275, 291, 461, 667, 772, 840, 1206, 1258, 1262
BsiHKAI	GWGCWC	1 cut(s)	856
BsiHKCI	CYCGRG	1 cut(s)	539
BsiSI	CCGG	8 cut(s)	29, 354, 558, 594, 842, 1112, 1259, 1419
BslFI	GGGAC	3 cut(s)	651, 1083, 1420
BslI	CCNNNNNNNGG	1 cut(s)	848
BsmAI	GTCTC	4 cut(s)	431, 433, 938, 1131
BsmFI	GGGAC	3 cut(s)	651, 1083, 1420
BsnI	GGCC	9 cut(s)	275, 291, 461, 667, 772, 840, 1206, 1258, 1262
BsoBI	CYCGRG	1 cut(s)	539
Bsp119I	TTCGAA	1 cut(s)	1461
Bsp1286I	GDGCHC	1 cut(s)	856
Bsp13I	TCCGGA	2 cut(s)	353, 1418
Bsp1407I	TGTACA	1 cut(s)	676
Bsp143I	GATC	9 cut(s)	42, 132, 240, 319, 597, 802, 898, 1093, 1330
Bsp1720I	GCTNAGC	1 cut(s)	1085
BspACI	CCGC	6 cut(s)	462, 924, 1024, 1313, 1482, 1491
BspANI	GGCC	9 cut(s)	275, 291, 461, 667, 772, 840, 1206, 1258, 1262
BspCNI	CTCAG	2 cut(s)	676, 983
BspEI	TCCGGA	2 cut(s)	353, 1418
BspFNI	CGCG	6 cut(s)	8, 521, 886, 1000, 1026, 1313
BspLI	GGNNCC	1 cut(s)	1332
BspMAI	CTGCAG	2 cut(s)	107, 1176
BspPI	GGATC	6 cut(s)	140, 314, 605, 810, 1325, 1338
BspQI	GCTCTTC	2 cut(s)	322, 895
BspT104I	TTCGAA	1 cut(s)	1461
BspTI	CTTAAG	1 cut(s)	1118
BsrDI	GCAATG	1 cut(s)	20
BsrFI	RCCGGY	3 cut(s)	28, 557, 1258
BsrGI	TGTACA	1 cut(s)	676
BsrI	ACTGG	2 cut(s)	73, 624
BssAI	RCCGGY	3 cut(s)	28, 557, 1258
BssECI	CCNNGG	1 cut(s)	1384
BssMI	GATC	9 cut(s)	42, 132, 240, 319, 597, 802, 898, 1093, 1330
Bst2UI	CCWGG	5 cut(s)	288, 324, 769, 1264, 1386
Bst4CI	ACNGT	6 cut(s)	427, 642, 940, 1050, 1133, 1233
Bst6I	CTCTTC	7 cut(s)	216, 322, 780, 895, 972, 1417, 1458
BstAFI	CTTAAG	1 cut(s)	1118
BstAUI	TGTACA	1 cut(s)	676
BstBI	TTCGAA	1 cut(s)	1461
BstC8I	GCNNGC	8 cut(s)	110, 139, 143, 306, 559, 1260, 1269, 1510
BstDEI	CTNAG	4 cut(s)	684, 961, 970, 1085
BstF5I	GGATG	3 cut(s)	199, 590, 1020
BstFNI	CGCG	6 cut(s)	8, 521, 886, 1000, 1026, 1313
BstHHI	GCGC	3 cut(s)	10, 147, 888
BstKTI	GATC	9 cut(s)	45, 135, 243, 322, 600, 805, 901, 1096, 1333
BstMAI	GTCTC	4 cut(s)	431, 433, 938, 1131
BstMBI	GATC	9 cut(s)	42, 132, 240, 319, 597, 802, 898, 1093, 1330
BstMWI	GCNNNNNNNGC	6 cut(s)	371, 527, 851, 971, 1264, 1268
BstNI	CCWGG	5 cut(s)	288, 324, 769, 1264, 1386
BstNSI	RCATGY	6 cut(s)	308, 403, 683, 951, 1084, 1478
BstSCI	CCNGG	7 cut(s)	286, 322, 593, 767, 840, 1262, 1384
BstSFI	CTRYAG	2 cut(s)	103, 1172
BstUI	CGCG	6 cut(s)	8, 521, 886, 1000, 1026, 1313
BstV1I	GCAGC	8 cut(s)	99, 117, 352, 355, 358, 803, 1043, 1442
BstV2I	GAAGAC	1 cut(s)	1450
BstX2I	RGATCY	3 cut(s)	802, 898, 1330
BstXI	CCANNNNNNTGG	2 cut(s)	780, 1214
BstYI	RGATCY	3 cut(s)	802, 898, 1330
BsuI	GTATCC	1 cut(s)	87
BsuRI	GGCC	9 cut(s)	275, 291, 461, 667, 772, 840, 1206, 1258, 1262
BtgZI	GCGATG	1 cut(s)	1041
BtrI	CACGTC	1 cut(s)	1375
BtsCI	GGATG	3 cut(s)	199, 590, 1020
BtsIMutI	CAGTG	1 cut(s)	38
Cac8I	GCNNGC	8 cut(s)	110, 139, 143, 306, 559, 1260, 1269, 1510
CfoI	GCGC	3 cut(s)	10, 147, 888
Cfr10I	RCCGGY	3 cut(s)	28, 557, 1258
Cfr13I	GGNCC	2 cut(s)	544, 839
CseI	GACGC	1 cut(s)	14
Csp6I	GTAC	2 cut(s)	647, 677
CviQI	GTAC	2 cut(s)	647, 677
DdeI	CTNAG	4 cut(s)	684, 961, 970, 1085
DpnI	GATC	9 cut(s)	44, 134, 242, 321, 599, 804, 900, 1095, 1332
DpnII	GATC	9 cut(s)	42, 132, 240, 319, 597, 802, 898, 1093, 1330
EaeI	YGGCCR	2 cut(s)	1204, 1260
Eam1104I	CTCTTC	7 cut(s)	216, 322, 780, 895, 972, 1417, 1458
EarI	CTCTTC	7 cut(s)	216, 322, 780, 895, 972, 1417, 1458
Ecl136II	GAGCTC	1 cut(s)	854
Eco147I	AGGCCT	1 cut(s)	667
Eco24I	GRGCYC	1 cut(s)	856
Eco32I	GATATC	1 cut(s)	1318
Eco47I	GGWCC	1 cut(s)	544
Eco53kI	GAGCTC	1 cut(s)	854
Eco88I	CYCGRG	1 cut(s)	539
EcoICRI	GAGCTC	1 cut(s)	854
EcoO109I	RGGNCCY	1 cut(s)	544
EcoRI	GAATTC	2 cut(s)	1343, 1361
EcoRII	CCWGG	5 cut(s)	286, 322, 767, 1262, 1384
EcoRV	GATATC	1 cut(s)	1318
EcoT22I	ATGCAT	1 cut(s)	532
EcoT38I	GRGCYC	1 cut(s)	856
FalI	AAGNNNNNCTT	2 cut(s)	791, 823
FaqI	GGGAC	3 cut(s)	651, 1083, 1420
FauI	CCCGC	1 cut(s)	1489
FauNDI	CATATG	1 cut(s)	1201
FbaI	TGATCA	1 cut(s)	1093
FokI	GGATG	3 cut(s)	206, 577, 1007
FriOI	GRGCYC	1 cut(s)	856
FseI	GGCCGGCC	1 cut(s)	1262
FspBI	CTAG	2 cut(s)	551, 650
GlaI	GCGC	3 cut(s)	9, 146, 887
GsaI	CCCAGC	1 cut(s)	88
GsuI	CTGGAG	2 cut(s)	195, 415
HaeIII	GGCC	9 cut(s)	275, 291, 461, 667, 772, 840, 1206, 1258, 1262
HapII	CCGG	8 cut(s)	29, 354, 558, 594, 842, 1112, 1259, 1419
HgaI	GACGC	1 cut(s)	14
HhaI	GCGC	3 cut(s)	10, 147, 888
Hin6I	GCGC	3 cut(s)	8, 145, 886
HinP1I	GCGC	3 cut(s)	8, 145, 886
HincII	GTYRAC	2 cut(s)	397, 1078
HindII	GTYRAC	2 cut(s)	397, 1078
HindIII	AAGCTT	2 cut(s)	1121, 1149
HinfI	GANTC	3 cut(s)	881, 982, 1306
HpaII	CCGG	8 cut(s)	29, 354, 558, 594, 842, 1112, 1259, 1419
HphI	GGTGA	2 cut(s)	938, 1092
Hpy166II	GTNNAC	3 cut(s)	397, 871, 1078
Hpy188I	TCNGA	5 cut(s)	96, 250, 408, 880, 1093
Hpy8I	GTNNAC	3 cut(s)	397, 871, 1078
Hpy99I	CGWCG	2 cut(s)	320, 1133
HpyAV	CCTTC	6 cut(s)	335, 360, 657, 786, 842, 1279
HpyCH4III	ACNGT	6 cut(s)	427, 642, 940, 1050, 1133, 1233
HpyCH4IV	ACGT	3 cut(s)	480, 1074, 1374
HpyF10VI	GCNNNNNNNGC	6 cut(s)	371, 527, 851, 971, 1264, 1268
HpyF3I	CTNAG	4 cut(s)	684, 961, 970, 1085
HpySE526I	ACGT	3 cut(s)	480, 1074, 1374
HspAI	GCGC	3 cut(s)	8, 145, 886
Kpn2I	TCCGGA	2 cut(s)	353, 1418
KroI	GCCGGC	2 cut(s)	557, 1258
KroNI	GCCGGC	2 cut(s)	559, 1260
Ksp22I	TGATCA	1 cut(s)	1093
Kzo9I	GATC	9 cut(s)	42, 132, 240, 319, 597, 802, 898, 1093, 1330
LguI	GCTCTTC	2 cut(s)	322, 895
LmnI	GCTCC	4 cut(s)	176, 851, 1248, 1483
Lsp1109I	GCAGC	8 cut(s)	99, 117, 352, 355, 358, 803, 1043, 1442
LweI	GCATC	3 cut(s)	539, 544, 1018
MaeI	CTAG	2 cut(s)	551, 650
MaeII	ACGT	3 cut(s)	480, 1074, 1374
MaeIII	GTNAC	6 cut(s)	151, 413, 626, 731, 1189, 1219
MalI	GATC	9 cut(s)	44, 134, 242, 321, 599, 804, 900, 1095, 1332
MboI	GATC	9 cut(s)	42, 132, 240, 319, 597, 802, 898, 1093, 1330
MfeI	CAATTG	2 cut(s)	210, 1293
MflI	RGATCY	3 cut(s)	802, 898, 1330
MhlI	GDGCHC	1 cut(s)	856
MlsI	TGGCCA	1 cut(s)	1206
MluCI	AATT	8 cut(s)	210, 474, 795, 1280, 1293, 1343, 1361, 1500
MluI	ACGCGT	2 cut(s)	519, 998
MluNI	TGGCCA	1 cut(s)	1206
MlyI	GAGTC	1 cut(s)	875
MmeI	TCCRAC	3 cut(s)	145, 228, 1044
Mox20I	TGGCCA	1 cut(s)	1206
Mph1103I	ATGCAT	1 cut(s)	532
MroI	TCCGGA	2 cut(s)	353, 1418
MroNI	GCCGGC	2 cut(s)	557, 1258
MroXI	GAANNNNTTC	2 cut(s)	345, 981
MscI	TGGCCA	1 cut(s)	1206
MseI	TTAA	8 cut(s)	189, 216, 456, 633, 798, 906, 935, 1119
MslI	CAYNNNNRTG	1 cut(s)	778
Msp20I	TGGCCA	1 cut(s)	1206
MspCI	CTTAAG	1 cut(s)	1118
MspI	CCGG	8 cut(s)	29, 354, 558, 594, 842, 1112, 1259, 1419
MspR9I	CCNGG	7 cut(s)	288, 324, 595, 769, 842, 1264, 1386
MunI	CAATTG	2 cut(s)	210, 1293
MvaI	CCWGG	5 cut(s)	288, 324, 769, 1264, 1386
MvnI	CGCG	6 cut(s)	8, 521, 886, 1000, 1026, 1313
MwoI	GCNNNNNNNGC	6 cut(s)	371, 527, 851, 971, 1264, 1268
NaeI	GCCGGC	2 cut(s)	559, 1260
NciI	CCSGG	2 cut(s)	595, 842
NdeI	CATATG	1 cut(s)	1201
NdeII	GATC	9 cut(s)	42, 132, 240, 319, 597, 802, 898, 1093, 1330
NgoMIV	GCCGGC	2 cut(s)	557, 1258
NlaIV	GGNNCC	1 cut(s)	1332
NmeAIII	GCCGAG	1 cut(s)	490
NmuCI	GTSAC	5 cut(s)	151, 413, 626, 1189, 1219
NsiI	ATGCAT	1 cut(s)	532
NspI	RCATGY	6 cut(s)	308, 403, 683, 951, 1084, 1478
NspV	TTCGAA	1 cut(s)	1461
OliI	CACNNNNGTG	1 cut(s)	778
PaeI	GCATGC	1 cut(s)	308
PaeR7I	CTCGAG	1 cut(s)	539
PceI	AGGCCT	1 cut(s)	667
PciSI	GCTCTTC	2 cut(s)	322, 895
PcsI	WCGNNNNNNNCGW	2 cut(s)	273, 1317
PdiI	GCCGGC	2 cut(s)	559, 1260
PdmI	GAANNNNTTC	2 cut(s)	345, 981
PfeI	GAWTC	2 cut(s)	982, 1306
PflFI	GACNNNGTC	1 cut(s)	1195
PfoI	TCCNGGA	2 cut(s)	322, 593
PleI	GAGTC	1 cut(s)	875
PpsI	GAGTC	1 cut(s)	875
PpuMI	RGGWCCY	1 cut(s)	544
Psp124BI	GAGCTC	1 cut(s)	856
Psp5II	RGGWCCY	1 cut(s)	544
Psp6I	CCWGG	5 cut(s)	286, 322, 767, 1262, 1384
PspFI	CCCAGC	1 cut(s)	84
PspGI	CCWGG	5 cut(s)	286, 322, 767, 1262, 1384
PspN4I	GGNNCC	1 cut(s)	1332
PspPI	GGNCC	2 cut(s)	544, 839
PspPPI	RGGWCCY	1 cut(s)	544
PstI	CTGCAG	2 cut(s)	107, 1176
PsuI	RGATCY	3 cut(s)	802, 898, 1330
PsyI	GACNNNGTC	1 cut(s)	1195
RigI	GGCCGGCC	1 cut(s)	1262
RsaI	GTAC	2 cut(s)	648, 678
RsaNI	GTAC	2 cut(s)	647, 677
RseI	CAYNNNNRTG	1 cut(s)	778
SacI	GAGCTC	1 cut(s)	856
SapI	GCTCTTC	2 cut(s)	322, 895
SaqAI	TTAA	8 cut(s)	189, 216, 456, 633, 798, 906, 935, 1119
Sau3AI	GATC	9 cut(s)	42, 132, 240, 319, 597, 802, 898, 1093, 1330
Sau96I	GGNCC	2 cut(s)	544, 839
SchI	GAGTC	1 cut(s)	875
ScrFI	CCNGG	7 cut(s)	288, 324, 595, 769, 842, 1264, 1386
SduI	GDGCHC	1 cut(s)	856
SfaNI	GCATC	3 cut(s)	539, 544, 1018
SfcI	CTRYAG	2 cut(s)	103, 1172
Sfr274I	CTCGAG	1 cut(s)	539
SfuI	TTCGAA	1 cut(s)	1461
SinI	GGWCC	1 cut(s)	544
SlaI	CTCGAG	1 cut(s)	539
SmiMI	CAYNNNNRTG	1 cut(s)	778
SmlI	CTYRAG	5 cut(s)	159, 449, 539, 761, 1118
SmoI	CTYRAG	5 cut(s)	159, 449, 539, 761, 1118
SphI	GCATGC	1 cut(s)	308
Sse9I	AATT	8 cut(s)	210, 474, 795, 1280, 1293, 1343, 1361, 1500
SseBI	AGGCCT	1 cut(s)	667
SsiI	CCGC	6 cut(s)	462, 924, 1024, 1313, 1482, 1491
SspMI	CTAG	2 cut(s)	551, 650
SstI	GAGCTC	1 cut(s)	856
StuI	AGGCCT	1 cut(s)	667
StyD4I	CCNGG	7 cut(s)	286, 322, 593, 767, 840, 1262, 1384
TaaI	ACNGT	6 cut(s)	427, 642, 940, 1050, 1133, 1233
TaiI	ACGT	3 cut(s)	483, 1077, 1377
TaqI	TCGA	8 cut(s)	315, 422, 540, 702, 1128, 1347, 1353, 1461
TasI	AATT	8 cut(s)	210, 474, 795, 1280, 1293, 1343, 1361, 1500
TatI	WGTACW	2 cut(s)	646, 676
TauI	GCSGC	2 cut(s)	464, 1494
TfiI	GAWTC	2 cut(s)	982, 1306
Tru1I	TTAA	8 cut(s)	189, 216, 456, 633, 798, 906, 935, 1119
Tru9I	TTAA	8 cut(s)	189, 216, 456, 633, 798, 906, 935, 1119
TscAI	CASTG	1 cut(s)	45
TseFI	GTSAC	5 cut(s)	151, 413, 626, 1189, 1219
TseI	GCWGC	9 cut(s)	10, 105, 112, 365, 368, 371, 791, 1031, 1430
Tsp45I	GTSAC	5 cut(s)	151, 413, 626, 1189, 1219
TspDTI	ATGAA	2 cut(s)	882, 1374
TspGWI	ACGGA	1 cut(s)	282
TspRI	CASTG	1 cut(s)	45
Tth111I	GACNNNGTC	1 cut(s)	1195
Vha464I	CTTAAG	1 cut(s)	1118
VpaK11BI	GGWCC	1 cut(s)	544
XapI	RAATTY	3 cut(s)	474, 1343, 1361
XceI	RCATGY	6 cut(s)	308, 403, 683, 951, 1084, 1478
XcmI	CCANNNNNNNNNTGG	1 cut(s)	439
XhoI	CTCGAG	1 cut(s)	539
XmnI	GAANNNNTTC	2 cut(s)	345, 981
XspI	CTAG	2 cut(s)	551, 650
Zsp2I	ATGCAT	1 cut(s)	532

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.