Rmu_sc0001626.1_g000019

allantoinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001626.1
Physical Location & Seq
Forward (+)
102917 .. 107862
4946 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001626.1_g000019.1.cds

Sequence Viewer

Length: 1638 bp
atggtagtggagattgcggagatgaggaaacaatactgtattctagacaccgttggattccgtctgctcaggattggagaactcgctcctaatccaccaacatatcatataacaattcatccgacgcagattaagatgggtctgcaattaccacttactccattctttcaagggatcctgaatgagttgaacatagcagtggggcaagtgacccctatcatgctcaaattaaatcagaagcaatgcagcctgcttccttaccaacactattggatagcaagcaagcgcattgtgacacctcaaggggtcatttctggactagttgaggtgaaggaggggaagattgcctccattgttaaagaagaggataaggatgggaaaaccaagttggagaatgtaattgattatggagaggctgttgtcatgcctggcttgattgatgtgcatgcacatcttgatgatcctggacgaagtgagtgggaaggatttccatcagggactaaagctgctgctgctggtggtataacaaccttggttgacatgcctctaaatagctttccttccactgtctctagagagactttggagctcaagcttaaggctgcggaaagcagaatttatgttgatgttggtttctggggaggccttgtccctgaaaatgcattcaacaaatctgctcttgaggatctcttaaatgccggtgctcttggtttgaagtctttcatgtgtccatcagggatcaatgactttcctatgacaaacagcagtcatattaaggagggtctgtctgtactggcaaaatatcgaaggcctttacttgtacatgcagagaaacaactagatcctgaagctaacttgggagtcgaagatggtagtaatgatgctcgttcctattcgacgtatcttaagactaggccaccttcatgggaagaggcagctataaaggatctcgttaccttgacaaaggacacaaggatcggtgctcctgcagaaggagctcatcttcatattgtgcacttgtctgactcaagctcttcattagatcttattaaggaagcaaaaagtggtggcgacagtttaactgttgagacgtgcccccactacttagctttctcagccgaagagattcgggatggagatactcgttttaagtgttctccacccatccgtgatgctgtcaataaggaaaaactgtggaacgctctgttggaaggggatcttgacatgttaagctctgatcattctccaacaacacccgaacttaagcggctggatgatggtgactttttaaaggctgggtttgttcttcctgtgacatggtcgtatggccagaaatatggagtcactttagaacaaatagctttgtggtggagtgaaaggccggccaagcttgctggacaaaaactaaagggggcaattgcaattggaaattatgcagatatcgtagtatggaatccagatgttgattttgaccttgatgatgactatcctgtatacattaagcatccgggtaattcagcctacatgggaacaaagctatctggaaaagtctcagctacttttcttagaggaaaccttgtcttcaaagaagggaatcatgctcctgcagcctgtggtgttccgattctggcaaaataa

Protein Analysis

545

Amino Acids

59.64

Weight (kDa)

5.6

Isoelectric Point (pI)

36.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1494
AciI CCGC 3 cut(s) 17, 605, 1267
AclWI GGATC 9 cut(s) 169, 182, 455, 693, 746, 836, 954, 983, 1224
AcoI YGGCCR 2 cut(s) 1327, 1383
AcsI RAATTY 1 cut(s) 615
AcuI CTGAAG 1 cut(s) 867
AfaI GTAC 2 cut(s) 792, 822
AfiI CCNNNNNNNGG 1 cut(s) 992
AflII CTTAAG 3 cut(s) 596, 905, 1262
AflIII ACRYGT 1 cut(s) 1224
AgsI TTSAA 5 cut(s) 170, 190, 667, 715, 1585
AhlI ACTAGT 1 cut(s) 319
AjiI CACGTC 1 cut(s) 1092
AjnI CCWGG 2 cut(s) 427, 463
AjuI GAANNNNNNNTTGG 4 cut(s) 371, 403, 1190, 1222
Alw21I GWGCWC 5 cut(s) 591, 706, 985, 1000, 1017
Alw26I GTCTC 4 cut(s) 572, 574, 1082, 1555
Alw44I GTGCAC 1 cut(s) 1013
AlwI GGATC 9 cut(s) 169, 182, 455, 693, 746, 836, 954, 983, 1224
AoxI GGCC 6 cut(s) 643, 809, 914, 1327, 1379, 1383
ApaLI GTGCAC 1 cut(s) 1013
ApeKI GCWGC 7 cut(s) 246, 506, 509, 512, 602, 935, 1607
ApoI RAATTY 1 cut(s) 615
Asp700I GAANNNNTTC 3 cut(s) 486, 719, 1125
AspLEI GCGC 1 cut(s) 288
AsuC2I CCSGG 1 cut(s) 1509
AsuHPI GGTGA 2 cut(s) 340, 1292
BaeGI GKGCMC 2 cut(s) 1017, 1097
BalI TGGCCA 1 cut(s) 1329
BamHI GGATCC 1 cut(s) 174
BanII GRGCYC 2 cut(s) 591, 1000
BbsI GAAGAC 1 cut(s) 1573
Bbv12I GWGCWC 5 cut(s) 591, 706, 985, 1000, 1017
BbvI GCAGC 7 cut(s) 258, 493, 496, 499, 589, 947, 1619
BccI CCATC 8 cut(s) 130, 368, 499, 739, 863, 1127, 1172, 1271
BciT130I CCWGG 2 cut(s) 429, 465
BclI TGATCA 1 cut(s) 1237
BcnI CCSGG 1 cut(s) 1509
BcoDI GTCTC 4 cut(s) 572, 574, 1082, 1555
BcuI ACTAGT 1 cut(s) 319
BfaI CTAG 5 cut(s) 44, 320, 573, 839, 912
BfmI CTRYAG 2 cut(s) 987, 1605
BfrI CTTAAG 3 cut(s) 596, 905, 1262
BglII AGATCT 1 cut(s) 1042
BisI GCNGC 8 cut(s) 247, 507, 510, 513, 603, 936, 1268, 1608
BlsI GCNGC 8 cut(s) 248, 508, 511, 514, 604, 937, 1269, 1609
Bme1390I CCNGG 3 cut(s) 429, 465, 1509
BmgBI CACGTC 1 cut(s) 1092
BmiI GGNNCC 1 cut(s) 176
BmrFI CCNGG 3 cut(s) 429, 465, 1509
BmsI GCATC 3 cut(s) 871, 1162, 1513
BpiI GAAGAC 1 cut(s) 1573
Bpu10I CCTNAGC 1 cut(s) 68
BpuEI CTTGAG 4 cut(s) 285, 575, 701, 1012
BpuMI CCSGG 1 cut(s) 1509
BsaBI GATNNNNATC 2 cut(s) 490, 1485
BsaJI CCNNGG 1 cut(s) 531
BsaXI ACNNNNNCTCC 6 cut(s) 402, 432, 633, 663, 770, 800
Bsc4I CCNNNNNNNGG 1 cut(s) 992
Bse118I RCCGGY 2 cut(s) 698, 1381
Bse1I ACTGG 1 cut(s) 798
Bse3DI GCAATG 1 cut(s) 248
Bse8I GATNNNNATC 2 cut(s) 490, 1485
BseBI CCWGG 2 cut(s) 429, 465
BseDI CCNNGG 1 cut(s) 531
BseGI GGATG 6 cut(s) 118, 379, 1138, 1164, 1279, 1504
BseJI GATNNNNATC 2 cut(s) 490, 1485
BseLI CCNNNNNNNGG 1 cut(s) 992
BseMI GCAATG 1 cut(s) 248
BseMII CTCAG 3 cut(s) 82, 1128, 1566
BseNI ACTGG 1 cut(s) 798
BseSI GKGCMC 2 cut(s) 1017, 1097
BseXI GCAGC 7 cut(s) 258, 493, 496, 499, 589, 947, 1619
BseYI CCCAGC 1 cut(s) 1295
BshFI GGCC 6 cut(s) 645, 811, 916, 1329, 1381, 1385
BsiHKAI GWGCWC 5 cut(s) 591, 706, 985, 1000, 1017
BsiSI CCGG 3 cut(s) 699, 1382, 1508
BslFI GGGAC 2 cut(s) 511, 635
BslI CCNNNNNNNGG 1 cut(s) 992
BsmAI GTCTC 4 cut(s) 572, 574, 1082, 1555
BsmBI CGTCTC 1 cut(s) 1082
BsmFI GGGAC 2 cut(s) 511, 635
BsmI GAATGC 1 cut(s) 662
BsnI GGCC 6 cut(s) 645, 811, 916, 1329, 1381, 1385
Bsp1286I GDGCHC 6 cut(s) 591, 706, 985, 1000, 1017, 1097
Bsp1407I TGTACA 1 cut(s) 820
BspACI CCGC 3 cut(s) 17, 605, 1267
BspANI GGCC 6 cut(s) 645, 811, 916, 1329, 1381, 1385
BspCNI CTCAG 3 cut(s) 81, 1127, 1565
BspLI GGNNCC 1 cut(s) 176
BspMAI CTGCAG 2 cut(s) 991, 1609
BspPI GGATC 9 cut(s) 169, 182, 455, 693, 746, 836, 954, 983, 1224
BspQI GCTCTTC 1 cut(s) 1039
BspTI CTTAAG 3 cut(s) 596, 905, 1262
BsrDI GCAATG 1 cut(s) 248
BsrFI RCCGGY 2 cut(s) 698, 1381
BsrGI TGTACA 1 cut(s) 820
BsrI ACTGG 1 cut(s) 798
BssAI RCCGGY 2 cut(s) 698, 1381
BssECI CCNNGG 1 cut(s) 531
BssNAI GTATAC 1 cut(s) 1495
BssT1I CCWWGG 1 cut(s) 531
Bst1107I GTATAC 1 cut(s) 1495
Bst2UI CCWGG 2 cut(s) 429, 465
Bst4CI ACNGT 6 cut(s) 38, 52, 568, 1076, 1084, 1194
Bst6I CTCTTC 4 cut(s) 357, 924, 1039, 1116
BstAFI CTTAAG 3 cut(s) 596, 905, 1262
BstAUI TGTACA 1 cut(s) 820
BstC8I GCNNGC 6 cut(s) 251, 280, 284, 447, 1383, 1392
BstDEI CTNAG 5 cut(s) 68, 1105, 1114, 1552, 1565
BstENI CCTNNNNNAGG 1 cut(s) 990
BstF5I GGATG 6 cut(s) 118, 379, 1138, 1164, 1279, 1504
BstHHI GCGC 1 cut(s) 288
BstMAI GTCTC 4 cut(s) 572, 574, 1082, 1555
BstMWI GCNNNNNNNGC 6 cut(s) 512, 995, 1115, 1387, 1391, 1607
BstNI CCWGG 2 cut(s) 429, 465
BstNSI RCATGY 4 cut(s) 449, 544, 827, 1228
BstSCI CCNGG 3 cut(s) 427, 463, 1507
BstSFI CTRYAG 2 cut(s) 987, 1605
BstSLI GKGCMC 2 cut(s) 1017, 1097
BstV1I GCAGC 7 cut(s) 258, 493, 496, 499, 589, 947, 1619
BstV2I GAAGAC 1 cut(s) 1573
BstX2I RGATCY 6 cut(s) 174, 685, 841, 946, 1042, 1216
BstXI CCANNNNNNTGG 2 cut(s) 924, 1337
BstYI RGATCY 6 cut(s) 174, 685, 841, 946, 1042, 1216
BstZ17I GTATAC 1 cut(s) 1495
BsuRI GGCC 6 cut(s) 645, 811, 916, 1329, 1381, 1385
BtrI CACGTC 1 cut(s) 1092
BtsCI GGATG 6 cut(s) 118, 379, 1138, 1164, 1279, 1504
BtsI GCAGTG 1 cut(s) 204
BtsIMutI CAGTG 2 cut(s) 204, 564
Cac8I GCNNGC 6 cut(s) 251, 280, 284, 447, 1383, 1392
CfoI GCGC 1 cut(s) 288
Cfr10I RCCGGY 2 cut(s) 698, 1381
CseI GACGC 1 cut(s) 133
Csp6I GTAC 2 cut(s) 791, 821
CviQI GTAC 2 cut(s) 791, 821
DdeI CTNAG 5 cut(s) 68, 1105, 1114, 1552, 1565
DraI TTTAAA 1 cut(s) 1290
EaeI YGGCCR 2 cut(s) 1327, 1383
Eam1104I CTCTTC 4 cut(s) 357, 924, 1039, 1116
EarI CTCTTC 4 cut(s) 357, 924, 1039, 1116
Ecl136II GAGCTC 2 cut(s) 589, 998
Eco130I CCWWGG 1 cut(s) 531
Eco147I AGGCCT 2 cut(s) 645, 811
Eco24I GRGCYC 2 cut(s) 591, 1000
Eco32I GATATC 1 cut(s) 1441
Eco53kI GAGCTC 2 cut(s) 589, 998
Eco57I CTGAAG 1 cut(s) 867
EcoICRI GAGCTC 2 cut(s) 589, 998
EcoNI CCTNNNNNAGG 1 cut(s) 990
EcoRII CCWGG 2 cut(s) 427, 463
EcoRV GATATC 1 cut(s) 1441
EcoT14I CCWWGG 1 cut(s) 531
EcoT22I ATGCAT 1 cut(s) 664
EcoT38I GRGCYC 2 cut(s) 591, 1000
ErhI CCWWGG 1 cut(s) 531
Esp3I CGTCTC 1 cut(s) 1082
FalI AAGNNNNNCTT 2 cut(s) 1203, 1235
FaqI GGGAC 2 cut(s) 511, 635
FbaI TGATCA 1 cut(s) 1237
FblI GTMKAC 1 cut(s) 1494
Fnu4HI GCNGC 8 cut(s) 247, 507, 510, 513, 603, 936, 1268, 1608
FokI GGATG 6 cut(s) 105, 386, 1145, 1151, 1286, 1491
FriOI GRGCYC 2 cut(s) 591, 1000
FseI GGCCGGCC 1 cut(s) 1385
Fsp4HI GCNGC 8 cut(s) 247, 507, 510, 513, 603, 936, 1268, 1608
FspBI CTAG 5 cut(s) 44, 320, 573, 839, 912
GlaI GCGC 1 cut(s) 287
GluI GCNGC 8 cut(s) 247, 507, 510, 513, 603, 936, 1268, 1608
GsaI CCCAGC 1 cut(s) 1299
HaeIII GGCC 6 cut(s) 645, 811, 916, 1329, 1381, 1385
HapII CCGG 3 cut(s) 699, 1382, 1508
HgaI GACGC 1 cut(s) 133
HhaI GCGC 1 cut(s) 288
Hin6I GCGC 1 cut(s) 286
HinP1I GCGC 1 cut(s) 286
HincII GTYRAC 1 cut(s) 538
HindII GTYRAC 1 cut(s) 538
HindIII AAGCTT 2 cut(s) 593, 1388
HinfI GANTC 8 cut(s) 57, 861, 1025, 1126, 1341, 1453, 1594, 1624
HpaII CCGG 3 cut(s) 699, 1382, 1508
HphI GGTGA 2 cut(s) 340, 1292
Hpy166II GTNNAC 3 cut(s) 538, 1015, 1495
Hpy188I TCNGA 5 cut(s) 123, 237, 1024, 1237, 1623
Hpy8I GTNNAC 3 cut(s) 538, 1015, 1495
Hpy99I CGWCG 2 cut(s) 127, 901
HpyAV CCTTC 8 cut(s) 325, 476, 570, 801, 930, 986, 1205, 1583
HpyCH4III ACNGT 6 cut(s) 38, 52, 568, 1076, 1084, 1194
HpyCH4IV ACGT 2 cut(s) 899, 1091
HpyF10VI GCNNNNNNNGC 6 cut(s) 512, 995, 1115, 1387, 1391, 1607
HpyF3I CTNAG 5 cut(s) 68, 1105, 1114, 1552, 1565
HpySE526I ACGT 2 cut(s) 899, 1091
HspAI GCGC 1 cut(s) 286
KroI GCCGGC 1 cut(s) 1381
KroNI GCCGGC 1 cut(s) 1383
Ksp22I TGATCA 1 cut(s) 1237
LguI GCTCTTC 1 cut(s) 1039
LmnI GCTCC 5 cut(s) 91, 586, 988, 995, 1606
Lsp1109I GCAGC 7 cut(s) 258, 493, 496, 499, 589, 947, 1619
LweI GCATC 3 cut(s) 871, 1162, 1513
MaeI CTAG 5 cut(s) 44, 320, 573, 839, 912
MaeII ACGT 2 cut(s) 899, 1091
MaeIII GTNAC 6 cut(s) 208, 292, 952, 1280, 1312, 1342
MboII GAAGA 9 cut(s) 352, 374, 878, 941, 995, 1026, 1133, 1298, 1573
MfeI CAATTG 2 cut(s) 1416, 1422
MflI RGATCY 6 cut(s) 174, 685, 841, 946, 1042, 1216
MhlI GDGCHC 6 cut(s) 591, 706, 985, 1000, 1017, 1097
MlsI TGGCCA 1 cut(s) 1329
MluCI AATT 9 cut(s) 114, 146, 227, 399, 615, 1416, 1422, 1429, 1513
MluNI TGGCCA 1 cut(s) 1329
MlyI GAGTC 3 cut(s) 870, 1019, 1350
MmeI TCCRAC 5 cut(s) 34, 146, 369, 1188, 1271
Mox20I TGGCCA 1 cut(s) 1329
Mph1103I ATGCAT 1 cut(s) 664
MroNI GCCGGC 1 cut(s) 1381
MroXI GAANNNNTTC 3 cut(s) 486, 719, 1125
MscI TGGCCA 1 cut(s) 1329
MslI CAYNNNNRTG 3 cut(s) 197, 456, 922
Msp20I TGGCCA 1 cut(s) 1329
MspCI CTTAAG 3 cut(s) 596, 905, 1262
MspI CCGG 3 cut(s) 699, 1382, 1508
MspR9I CCNGG 3 cut(s) 429, 465, 1509
MunI CAATTG 2 cut(s) 1416, 1422
Mva1269I GAATGC 1 cut(s) 662
MvaI CCWGG 2 cut(s) 429, 465
MwoI GCNNNNNNNGC 6 cut(s) 512, 995, 1115, 1387, 1391, 1607
NaeI GCCGGC 1 cut(s) 1383
NciI CCSGG 1 cut(s) 1509
NgoMIV GCCGGC 1 cut(s) 1381
NlaIV GGNNCC 1 cut(s) 176
NmuCI GTSAC 5 cut(s) 208, 292, 1280, 1312, 1342
NsiI ATGCAT 1 cut(s) 664
NspI RCATGY 4 cut(s) 449, 544, 827, 1228
PaeI GCATGC 1 cut(s) 449
PceI AGGCCT 2 cut(s) 645, 811
PciI ACATGT 1 cut(s) 1224
PciSI GCTCTTC 1 cut(s) 1039
PctI GAATGC 1 cut(s) 662
PdiI GCCGGC 1 cut(s) 1383
PdmI GAANNNNTTC 3 cut(s) 486, 719, 1125
PfeI GAWTC 5 cut(s) 57, 1126, 1453, 1594, 1624
PflFI GACNNNGTC 1 cut(s) 1318
PfoI TCCNGGA 1 cut(s) 463
PkrI GCNGC 8 cut(s) 248, 508, 511, 514, 604, 937, 1269, 1609
PleI GAGTC 3 cut(s) 869, 1019, 1349
PpsI GAGTC 3 cut(s) 869, 1019, 1349
PscI ACATGT 1 cut(s) 1224
Psp124BI GAGCTC 2 cut(s) 591, 1000
Psp6I CCWGG 2 cut(s) 427, 463
PspFI CCCAGC 1 cut(s) 1295
PspGI CCWGG 2 cut(s) 427, 463
PspN4I GGNNCC 1 cut(s) 176
PstI CTGCAG 2 cut(s) 991, 1609
PsuI RGATCY 6 cut(s) 174, 685, 841, 946, 1042, 1216
PsyI GACNNNGTC 1 cut(s) 1318
RigI GGCCGGCC 1 cut(s) 1385
RsaI GTAC 2 cut(s) 792, 822
RsaNI GTAC 2 cut(s) 791, 821
RseI CAYNNNNRTG 3 cut(s) 197, 456, 922
SacI GAGCTC 2 cut(s) 591, 1000
SapI GCTCTTC 1 cut(s) 1039
SatI GCNGC 8 cut(s) 247, 507, 510, 513, 603, 936, 1268, 1608
SchI GAGTC 3 cut(s) 870, 1019, 1350
ScrFI CCNGG 3 cut(s) 429, 465, 1509
SduI GDGCHC 6 cut(s) 591, 706, 985, 1000, 1017, 1097
SfaNI GCATC 3 cut(s) 871, 1162, 1513
SfcI CTRYAG 2 cut(s) 987, 1605
SmiMI CAYNNNNRTG 3 cut(s) 197, 456, 922
SmlI CTYRAG 7 cut(s) 300, 590, 596, 680, 905, 1027, 1262
SmoI CTYRAG 7 cut(s) 300, 590, 596, 680, 905, 1027, 1262
SpeI ACTAGT 1 cut(s) 319
SphI GCATGC 1 cut(s) 449
Sse9I AATT 9 cut(s) 114, 146, 227, 399, 615, 1416, 1422, 1429, 1513
SseBI AGGCCT 2 cut(s) 645, 811
SsiI CCGC 3 cut(s) 17, 605, 1267
SspMI CTAG 5 cut(s) 44, 320, 573, 839, 912
SstI GAGCTC 2 cut(s) 591, 1000
StuI AGGCCT 2 cut(s) 645, 811
StyD4I CCNGG 3 cut(s) 427, 463, 1507
StyI CCWWGG 1 cut(s) 531
TaaI ACNGT 6 cut(s) 38, 52, 568, 1076, 1084, 1194
TaiI ACGT 2 cut(s) 902, 1094
TaqI TCGA 3 cut(s) 805, 864, 896
TasI AATT 9 cut(s) 114, 146, 227, 399, 615, 1416, 1422, 1429, 1513
TatI WGTACW 2 cut(s) 790, 820
TauI GCSGC 1 cut(s) 1270
TfiI GAWTC 5 cut(s) 57, 1126, 1453, 1594, 1624
TscAI CASTG 2 cut(s) 204, 571
TseFI GTSAC 5 cut(s) 208, 292, 1280, 1312, 1342
TseI GCWGC 7 cut(s) 246, 506, 509, 512, 602, 935, 1607
Tsp45I GTSAC 5 cut(s) 208, 292, 1280, 1312, 1342
TspDTI ATGAA 5 cut(s) 107, 712, 912, 995, 1026
TspGWI ACGGA 2 cut(s) 50, 1157
TspRI CASTG 2 cut(s) 204, 571
Tth111I GACNNNGTC 1 cut(s) 1318
Vha464I CTTAAG 3 cut(s) 596, 905, 1262
VneI GTGCAC 1 cut(s) 1013
XagI CCTNNNNNAGG 1 cut(s) 990
XapI RAATTY 1 cut(s) 615
XbaI TCTAGA 2 cut(s) 43, 572
XceI RCATGY 4 cut(s) 449, 544, 827, 1228
XmiI GTMKAC 1 cut(s) 1494
XmnI GAANNNNTTC 3 cut(s) 486, 719, 1125
XspI CTAG 5 cut(s) 44, 320, 573, 839, 912
Zsp2I ATGCAT 1 cut(s) 664
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.