Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0004966

Physical Location & Seq

Genomic Coordinates Reverse (-)

5268224 .. 5272737

Gene Structure 4514 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG062500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1236 bp

ATGCCTGGCTTGATTGATGTGCATGCACATCTTGATGATCCTGGACGAAGTGAGTGGGAAGGATTTCCATCAGGGACTAAAGCTGCTGCTGCTGGTGGTATAACAACCTTGGTTGACATGCCTCTAAATAGCTTTCCTTCCACTGTCTCTAGAGAGACTTTGGAGCTCAAGCTTAAGGCTGCGGAAAGCAGAATTTATGTTGATGTTGGTTTCTGGGGAGGCCTTGTCCCTGAAAATGCATTCAACAAATCTGCTCTTGAGGATCTCTTAAATGCTGGTGCTCTTGGTTTGAAGTCTTTCATGTGTCCATCAGGGATCAATGACTTTCCTATGACAAACAGCAGTCATATTAAGGAGGGTCTGTCTGTACTGGCAAAATATCGGAGGCCTTTACTTGTACATGCAGAGAAACAACTAGATCCTGAAGCTAACTTGGGAGTCGAAGATGGTAGTAATGATGCTCGTTCCTATTCGACGTATCTTAAGACTAGGCCACCTTCATGGGAAGAGGCAGCTATAAAGGATCTCGTTACCTTGACAAAGGACACAAGGATCGGTGCTCCTGCAGAAGGAGCTCATCTTCATATTGTGCACTTGTCTGACTCAAGCTCTTCATTAGATCTTATTAAGGAAGCAAAAAGTGGTGGCGACAGTTTAACTGTTGAGACGTGCCCCCACTACTTAGCTTTCTCAGCCGAAGAGATTCGGGATGGAGATACTCGTTTTAAGTGTTCTCCACCCATCCGTGATGCTGTCAATAAGGAAAAACTGTGGAACGCTCTGTTGGAAGGGGATCTTGACATGTTAAGCTCTGATCATTCTCCAACAACACCCGAACTTAAGCGGCTGGATGATGGTGACTTTTTAAAGGCTTGGGGTGGCATATCGTGCTTGCAGTTTGTTCTTCCTGTGACATGGTCGTATGGCCAGAAATATGGAGTAACTTTAGAACAAATGGCTCTGTGGTGGAGTGAAAGGCCAGCCAAGCTTGCTGGACAAAAACTAAAGGGGGCAATTGCAATTGGAAACTATGCAGATATTGTAGTATGGAATCCAGATGTTGATTTTGACCTTGATGATGACTATCCTGTATACATTAAGCATCCGGGTAATTCAGCCTACATGGGAACAAAGTTATCTGGAAAAGTCTCAGCTACTTTTCTTAGAGGACACCTTGTCTTCAAAGAAGGGAATCATGCTCCTGCAGCCTGTGGTGTTCCGATTCTTGCAAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000255 GO:0000256 GO:0003674 GO:0003824 GO:0004038 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006139 GO:0006144 GO:0006145 GO:0006725 GO:0006807 GO:0006950 GO:0006995 GO:0007154 GO:0008150 GO:0008152 GO:0009056 GO:0009112 GO:0009267 GO:0009605 GO:0009987 GO:0009991 GO:0010135 GO:0010136 GO:0012505 GO:0016787 GO:0016810 GO:0016812 GO:0017144 GO:0019439 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0034641 GO:0042594 GO:0042737 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043562 GO:0043603 GO:0043605 GO:0044237 GO:0044238 GO:0044248 GO:0044270 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046113 GO:0046483 GO:0046700 GO:0050896 GO:0051716 GO:0055086 GO:0071496 GO:0071704 GO:0072521 GO:0072523 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00230 ko01100 ko01120 map00230 map01100 map01120

Pfam Domains

Protein Families

Amidohydro_1

Protein Analysis

411

Amino Acids

44.66

Weight (kDa)

5.34

Isoelectric Point (pI)

40.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Amidohydro_1	PF01979	1 - 393	6.1e-23	Amidohydrolase family
DHOase	PF12890	1 - 200	3.9e-08	Dihydro-orotase-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004966)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G04955 AT4G04955
fragaria_vesca	FvH4_3g09410 FvH4_3g09410 FvH4_3g09410 FvH4_3g09410
malus_domestica	MD00G1095000.v1.1 MD05G1314100.v1.1
prunus_persica	Prupe.4G045000_v2.0.a1
pyrus_communis	pycom05g29210
rosa_chinensis	RchiOBHm_Chr5g0008181
rosa_laevigata	RLG00000031540 RLG00000031544
rosa_multiflora	Rmu_sc0001352.1_g000006 Rmu_sc0001352.1_g000028 Rmu_sc0001626.1_g000019
rosa_roxburghii	Rroxscaffold_1G00068300
rosa_rugosa	Rorug03G0302600 Rorug04G0433600 Rorug04G0433700 Rorug04G0433800 Rorug04G0433900 Rorug04G0433900
rosa_samantha	Rh4AG007300 Rh4AG211200 Rh5AG062500 Rh5BG058600 Rh5CG069000 Rh5DG057900
rosa_wichuraiana	Rw5G005860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	1092
AciI	CCGC	2 cut(s)	182, 844
AclWI	GGATC	7 cut(s)	32, 270, 323, 413, 531, 560, 801
AcoI	YGGCCR	1 cut(s)	925
AcsI	RAATTY	1 cut(s)	192
AcuI	CTGAAG	1 cut(s)	444
AfaI	GTAC	2 cut(s)	369, 399
AfiI	CCNNNNNNNGG	1 cut(s)	569
AflII	CTTAAG	3 cut(s)	173, 482, 839
AflIII	ACRYGT	1 cut(s)	801
AgsI	TTSAA	3 cut(s)	244, 292, 1183
AhdI	GACNNNNNGTC	1 cut(s)	1175
AjiI	CACGTC	1 cut(s)	669
AjnI	CCWGG	2 cut(s)	4, 40
AjuI	GAANNNNNNNTTGG	2 cut(s)	767, 799
Alw21I	GWGCWC	5 cut(s)	168, 283, 562, 577, 594
Alw26I	GTCTC	4 cut(s)	149, 151, 659, 1153
Alw44I	GTGCAC	1 cut(s)	590
AlwI	GGATC	7 cut(s)	32, 270, 323, 413, 531, 560, 801
AoxI	GGCC	5 cut(s)	220, 386, 491, 925, 977
ApaLI	GTGCAC	1 cut(s)	590
ApeKI	GCWGC	6 cut(s)	83, 86, 89, 179, 512, 1205
ApoI	RAATTY	1 cut(s)	192
Asp700I	GAANNNNTTC	3 cut(s)	63, 296, 702
AsuC2I	CCSGG	1 cut(s)	1107
AsuHPI	GGTGA	1 cut(s)	869
BaeGI	GKGCMC	2 cut(s)	594, 674
BalI	TGGCCA	1 cut(s)	927
BanII	GRGCYC	2 cut(s)	168, 577
BbsI	GAAGAC	1 cut(s)	1171
Bbv12I	GWGCWC	5 cut(s)	168, 283, 562, 577, 594
BbvI	GCAGC	6 cut(s)	70, 73, 76, 166, 524, 1217
BccI	CCATC	6 cut(s)	76, 316, 440, 704, 749, 848
BciT130I	CCWGG	2 cut(s)	6, 42
BclI	TGATCA	1 cut(s)	814
BcnI	CCSGG	1 cut(s)	1107
BcoDI	GTCTC	4 cut(s)	149, 151, 659, 1153
BfaI	CTAG	3 cut(s)	150, 416, 489
BfmI	CTRYAG	2 cut(s)	564, 1203
BfrI	CTTAAG	3 cut(s)	173, 482, 839
BglII	AGATCT	1 cut(s)	619
BisI	GCNGC	7 cut(s)	84, 87, 90, 180, 513, 845, 1206
BlsI	GCNGC	7 cut(s)	85, 88, 91, 181, 514, 846, 1207
Bme1390I	CCNGG	3 cut(s)	6, 42, 1107
BmeRI	GACNNNNNGTC	1 cut(s)	1175
BmgBI	CACGTC	1 cut(s)	669
BmrFI	CCNGG	3 cut(s)	6, 42, 1107
BmsI	GCATC	3 cut(s)	448, 739, 1111
BpiI	GAAGAC	1 cut(s)	1171
BpuEI	CTTGAG	3 cut(s)	152, 278, 589
BpuMI	CCSGG	1 cut(s)	1107
BsaBI	GATNNNNATC	2 cut(s)	67, 1083
BsaJI	CCNNGG	1 cut(s)	108
BsaXI	ACNNNNNCTCC	4 cut(s)	210, 240, 347, 377
Bsc4I	CCNNNNNNNGG	1 cut(s)	569
Bse1I	ACTGG	1 cut(s)	375
Bse8I	GATNNNNATC	2 cut(s)	67, 1083
BseBI	CCWGG	2 cut(s)	6, 42
BseDI	CCNNGG	1 cut(s)	108
BseGI	GGATG	4 cut(s)	715, 741, 856, 1102
BseJI	GATNNNNATC	2 cut(s)	67, 1083
BseLI	CCNNNNNNNGG	1 cut(s)	569
BseMII	CTCAG	2 cut(s)	705, 1164
BseNI	ACTGG	1 cut(s)	375
BseSI	GKGCMC	2 cut(s)	594, 674
BseXI	GCAGC	6 cut(s)	70, 73, 76, 166, 524, 1217
BshFI	GGCC	5 cut(s)	222, 388, 493, 927, 979
BsiHKAI	GWGCWC	5 cut(s)	168, 283, 562, 577, 594
BsiSI	CCGG	1 cut(s)	1106
BslFI	GGGAC	2 cut(s)	88, 212
BslI	CCNNNNNNNGG	1 cut(s)	569
BsmAI	GTCTC	4 cut(s)	149, 151, 659, 1153
BsmBI	CGTCTC	1 cut(s)	659
BsmFI	GGGAC	2 cut(s)	88, 212
BsmI	GAATGC	1 cut(s)	239
BsnI	GGCC	5 cut(s)	222, 388, 493, 927, 979
Bsp1286I	GDGCHC	6 cut(s)	168, 283, 562, 577, 594, 674
Bsp1407I	TGTACA	1 cut(s)	397
Bsp143I	GATC	9 cut(s)	37, 262, 315, 418, 523, 552, 619, 793, 814
BspACI	CCGC	2 cut(s)	182, 844
BspANI	GGCC	5 cut(s)	222, 388, 493, 927, 979
BspCNI	CTCAG	2 cut(s)	704, 1163
BspMAI	CTGCAG	2 cut(s)	568, 1207
BspPI	GGATC	7 cut(s)	32, 270, 323, 413, 531, 560, 801
BspQI	GCTCTTC	1 cut(s)	616
BspTI	CTTAAG	3 cut(s)	173, 482, 839
BsrGI	TGTACA	1 cut(s)	397
BsrI	ACTGG	1 cut(s)	375
BssECI	CCNNGG	1 cut(s)	108
BssMI	GATC	9 cut(s)	37, 262, 315, 418, 523, 552, 619, 793, 814
BssNAI	GTATAC	1 cut(s)	1093
BssT1I	CCWWGG	1 cut(s)	108
Bst1107I	GTATAC	1 cut(s)	1093
Bst2UI	CCWGG	2 cut(s)	6, 42
Bst4CI	ACNGT	4 cut(s)	145, 653, 661, 771
Bst6I	CTCTTC	3 cut(s)	501, 616, 693
BstAFI	CTTAAG	3 cut(s)	173, 482, 839
BstAPI	GCANNNNNTGC	1 cut(s)	888
BstAUI	TGTACA	1 cut(s)	397
BstC8I	GCNNGC	4 cut(s)	24, 893, 981, 990
BstDEI	CTNAG	4 cut(s)	682, 691, 1150, 1163
BstENI	CCTNNNNNAGG	1 cut(s)	567
BstF5I	GGATG	4 cut(s)	715, 741, 856, 1102
BstKTI	GATC	9 cut(s)	40, 265, 318, 421, 526, 555, 622, 796, 817
BstMAI	GTCTC	4 cut(s)	149, 151, 659, 1153
BstMBI	GATC	9 cut(s)	37, 262, 315, 418, 523, 552, 619, 793, 814
BstMWI	GCNNNNNNNGC	7 cut(s)	89, 572, 692, 888, 985, 989, 1205
BstNI	CCWGG	2 cut(s)	6, 42
BstNSI	RCATGY	4 cut(s)	26, 121, 404, 805
BstSCI	CCNGG	3 cut(s)	4, 40, 1105
BstSFI	CTRYAG	2 cut(s)	564, 1203
BstSLI	GKGCMC	2 cut(s)	594, 674
BstV1I	GCAGC	6 cut(s)	70, 73, 76, 166, 524, 1217
BstV2I	GAAGAC	1 cut(s)	1171
BstX2I	RGATCY	5 cut(s)	262, 418, 523, 619, 793
BstXI	CCANNNNNNTGG	2 cut(s)	501, 935
BstYI	RGATCY	5 cut(s)	262, 418, 523, 619, 793
BstZ17I	GTATAC	1 cut(s)	1093
BsuRI	GGCC	5 cut(s)	222, 388, 493, 927, 979
BtrI	CACGTC	1 cut(s)	669
BtsCI	GGATG	4 cut(s)	715, 741, 856, 1102
BtsIMutI	CAGTG	1 cut(s)	141
Cac8I	GCNNGC	4 cut(s)	24, 893, 981, 990
Csp6I	GTAC	2 cut(s)	368, 398
CviAII	CATG	9 cut(s)	23, 118, 301, 401, 501, 802, 915, 1123, 1196
CviQI	GTAC	2 cut(s)	368, 398
DdeI	CTNAG	4 cut(s)	682, 691, 1150, 1163
DpnI	GATC	9 cut(s)	39, 264, 317, 420, 525, 554, 621, 795, 816
DpnII	GATC	9 cut(s)	37, 262, 315, 418, 523, 552, 619, 793, 814
DraI	TTTAAA	1 cut(s)	867
DriI	GACNNNNNGTC	1 cut(s)	1175
EaeI	YGGCCR	1 cut(s)	925
Eam1104I	CTCTTC	3 cut(s)	501, 616, 693
Eam1105I	GACNNNNNGTC	1 cut(s)	1175
EarI	CTCTTC	3 cut(s)	501, 616, 693
Ecl136II	GAGCTC	2 cut(s)	166, 575
Eco130I	CCWWGG	1 cut(s)	108
Eco147I	AGGCCT	2 cut(s)	222, 388
Eco24I	GRGCYC	2 cut(s)	168, 577
Eco53kI	GAGCTC	2 cut(s)	166, 575
Eco57I	CTGAAG	1 cut(s)	444
EcoICRI	GAGCTC	2 cut(s)	166, 575
EcoNI	CCTNNNNNAGG	1 cut(s)	567
EcoRII	CCWGG	2 cut(s)	4, 40
EcoT14I	CCWWGG	1 cut(s)	108
EcoT22I	ATGCAT	1 cut(s)	241
EcoT38I	GRGCYC	2 cut(s)	168, 577
ErhI	CCWWGG	1 cut(s)	108
Esp3I	CGTCTC	1 cut(s)	659
FaeI	CATG	9 cut(s)	26, 121, 304, 404, 504, 805, 918, 1126, 1199
FalI	AAGNNNNNCTT	2 cut(s)	780, 812
FaqI	GGGAC	2 cut(s)	88, 212
FatI	CATG	9 cut(s)	22, 117, 300, 400, 500, 801, 914, 1122, 1195
FbaI	TGATCA	1 cut(s)	814
FblI	GTMKAC	1 cut(s)	1092
Fnu4HI	GCNGC	7 cut(s)	84, 87, 90, 180, 513, 845, 1206
FokI	GGATG	4 cut(s)	722, 728, 863, 1089
FriOI	GRGCYC	2 cut(s)	168, 577
Fsp4HI	GCNGC	7 cut(s)	84, 87, 90, 180, 513, 845, 1206
FspBI	CTAG	3 cut(s)	150, 416, 489
GluI	GCNGC	7 cut(s)	84, 87, 90, 180, 513, 845, 1206
HaeIII	GGCC	5 cut(s)	222, 388, 493, 927, 979
HapII	CCGG	1 cut(s)	1106
Hin1II	CATG	9 cut(s)	26, 121, 304, 404, 504, 805, 918, 1126, 1199
HincII	GTYRAC	1 cut(s)	115
HindII	GTYRAC	1 cut(s)	115
HindIII	AAGCTT	2 cut(s)	170, 986
HinfI	GANTC	6 cut(s)	438, 602, 703, 1051, 1192, 1222
HpaII	CCGG	1 cut(s)	1106
HphI	GGTGA	1 cut(s)	869
Hpy166II	GTNNAC	3 cut(s)	115, 592, 1093
Hpy188I	TCNGA	4 cut(s)	384, 601, 814, 1221
Hpy188III	TCNNGA	8 cut(s)	32, 150, 257, 422, 707, 797, 1055, 1140
Hpy8I	GTNNAC	3 cut(s)	115, 592, 1093
Hpy99I	CGWCG	1 cut(s)	478
HpyAV	CCTTC	6 cut(s)	53, 147, 507, 563, 782, 1181
HpyCH4III	ACNGT	4 cut(s)	145, 653, 661, 771
HpyCH4IV	ACGT	2 cut(s)	476, 668
HpyF10VI	GCNNNNNNNGC	7 cut(s)	89, 572, 692, 888, 985, 989, 1205
HpyF3I	CTNAG	4 cut(s)	682, 691, 1150, 1163
HpySE526I	ACGT	2 cut(s)	476, 668
Hsp92II	CATG	9 cut(s)	26, 121, 304, 404, 504, 805, 918, 1126, 1199
Ksp22I	TGATCA	1 cut(s)	814
Kzo9I	GATC	9 cut(s)	37, 262, 315, 418, 523, 552, 619, 793, 814
LguI	GCTCTTC	1 cut(s)	616
LmnI	GCTCC	4 cut(s)	163, 565, 572, 1204
Lsp1109I	GCAGC	6 cut(s)	70, 73, 76, 166, 524, 1217
LweI	GCATC	3 cut(s)	448, 739, 1111
MaeI	CTAG	3 cut(s)	150, 416, 489
MaeII	ACGT	2 cut(s)	476, 668
MaeIII	GTNAC	4 cut(s)	529, 857, 910, 940
MalI	GATC	9 cut(s)	39, 264, 317, 420, 525, 554, 621, 795, 816
MboI	GATC	9 cut(s)	37, 262, 315, 418, 523, 552, 619, 793, 814
MboII	GAAGA	7 cut(s)	455, 518, 572, 603, 710, 896, 1171
MfeI	CAATTG	2 cut(s)	1014, 1020
MflI	RGATCY	5 cut(s)	262, 418, 523, 619, 793
MhlI	GDGCHC	6 cut(s)	168, 283, 562, 577, 594, 674
MlsI	TGGCCA	1 cut(s)	927
MluCI	AATT	4 cut(s)	192, 1014, 1020, 1111
MluNI	TGGCCA	1 cut(s)	927
MlyI	GAGTC	2 cut(s)	447, 596
MmeI	TCCRAC	2 cut(s)	765, 848
MnlI	CCTC	7 cut(s)	132, 212, 253, 349, 378, 502, 1160
Mox20I	TGGCCA	1 cut(s)	927
Mph1103I	ATGCAT	1 cut(s)	241
MroXI	GAANNNNTTC	3 cut(s)	63, 296, 702
MscI	TGGCCA	1 cut(s)	927
MslI	CAYNNNNRTG	2 cut(s)	33, 499
Msp20I	TGGCCA	1 cut(s)	927
MspCI	CTTAAG	3 cut(s)	173, 482, 839
MspI	CCGG	1 cut(s)	1106
MspR9I	CCNGG	3 cut(s)	6, 42, 1107
MunI	CAATTG	2 cut(s)	1014, 1020
Mva1269I	GAATGC	1 cut(s)	239
MvaI	CCWGG	2 cut(s)	6, 42
MwoI	GCNNNNNNNGC	7 cut(s)	89, 572, 692, 888, 985, 989, 1205
NciI	CCSGG	1 cut(s)	1107
NdeII	GATC	9 cut(s)	37, 262, 315, 418, 523, 552, 619, 793, 814
NlaIII	CATG	9 cut(s)	26, 121, 304, 404, 504, 805, 918, 1126, 1199
NmuCI	GTSAC	2 cut(s)	857, 910
NsiI	ATGCAT	1 cut(s)	241
NspI	RCATGY	4 cut(s)	26, 121, 404, 805
PaeI	GCATGC	1 cut(s)	26
PceI	AGGCCT	2 cut(s)	222, 388
PciI	ACATGT	1 cut(s)	801
PciSI	GCTCTTC	1 cut(s)	616
PctI	GAATGC	1 cut(s)	239
PdmI	GAANNNNTTC	3 cut(s)	63, 296, 702
PfeI	GAWTC	4 cut(s)	703, 1051, 1192, 1222
PflFI	GACNNNGTC	1 cut(s)	916
PfoI	TCCNGGA	1 cut(s)	40
PkrI	GCNGC	7 cut(s)	85, 88, 91, 181, 514, 846, 1207
PleI	GAGTC	2 cut(s)	446, 596
PpsI	GAGTC	2 cut(s)	446, 596
PscI	ACATGT	1 cut(s)	801
Psp124BI	GAGCTC	2 cut(s)	168, 577
Psp6I	CCWGG	2 cut(s)	4, 40
PspGI	CCWGG	2 cut(s)	4, 40
PstI	CTGCAG	2 cut(s)	568, 1207
PsuI	RGATCY	5 cut(s)	262, 418, 523, 619, 793
PsyI	GACNNNGTC	1 cut(s)	916
RsaI	GTAC	2 cut(s)	369, 399
RsaNI	GTAC	2 cut(s)	368, 398
RseI	CAYNNNNRTG	2 cut(s)	33, 499
SacI	GAGCTC	2 cut(s)	168, 577
SapI	GCTCTTC	1 cut(s)	616
SatI	GCNGC	7 cut(s)	84, 87, 90, 180, 513, 845, 1206
Sau3AI	GATC	9 cut(s)	37, 262, 315, 418, 523, 552, 619, 793, 814
SchI	GAGTC	2 cut(s)	447, 596
ScrFI	CCNGG	3 cut(s)	6, 42, 1107
SduI	GDGCHC	6 cut(s)	168, 283, 562, 577, 594, 674
SfaNI	GCATC	3 cut(s)	448, 739, 1111
SfcI	CTRYAG	2 cut(s)	564, 1203
SmiMI	CAYNNNNRTG	2 cut(s)	33, 499
SmlI	CTYRAG	6 cut(s)	167, 173, 257, 482, 604, 839
SmoI	CTYRAG	6 cut(s)	167, 173, 257, 482, 604, 839
SphI	GCATGC	1 cut(s)	26
Sse9I	AATT	4 cut(s)	192, 1014, 1020, 1111
SseBI	AGGCCT	2 cut(s)	222, 388
SsiI	CCGC	2 cut(s)	182, 844
SspMI	CTAG	3 cut(s)	150, 416, 489
SstI	GAGCTC	2 cut(s)	168, 577
StuI	AGGCCT	2 cut(s)	222, 388
StyD4I	CCNGG	3 cut(s)	4, 40, 1105
StyI	CCWWGG	1 cut(s)	108
TaaI	ACNGT	4 cut(s)	145, 653, 661, 771
TaiI	ACGT	2 cut(s)	479, 671
TaqI	TCGA	2 cut(s)	441, 473
TasI	AATT	4 cut(s)	192, 1014, 1020, 1111
TatI	WGTACW	2 cut(s)	367, 397
TauI	GCSGC	1 cut(s)	847
TfiI	GAWTC	4 cut(s)	703, 1051, 1192, 1222
TscAI	CASTG	1 cut(s)	148
TseFI	GTSAC	2 cut(s)	857, 910
TseI	GCWGC	6 cut(s)	83, 86, 89, 179, 512, 1205
Tsp45I	GTSAC	2 cut(s)	857, 910
TspDTI	ATGAA	4 cut(s)	289, 489, 572, 603
TspGWI	ACGGA	1 cut(s)	734
TspRI	CASTG	1 cut(s)	148
Tth111I	GACNNNGTC	1 cut(s)	916
Vha464I	CTTAAG	3 cut(s)	173, 482, 839
VneI	GTGCAC	1 cut(s)	590
XagI	CCTNNNNNAGG	1 cut(s)	567
XapI	RAATTY	1 cut(s)	192
XbaI	TCTAGA	1 cut(s)	149
XceI	RCATGY	4 cut(s)	26, 121, 404, 805
XmiI	GTMKAC	1 cut(s)	1092
XmnI	GAANNNNTTC	3 cut(s)	63, 296, 702
XspI	CTAG	3 cut(s)	150, 416, 489
Zsp2I	ATGCAT	1 cut(s)	241

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.