No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G21445 |
| fragaria_vesca | FvH4_3g03820 FvH4_3g03870 |
| malus_domestica | MD05G1326300.v1.1 MD10G1304300.v1.1 |
| prunus_persica | Prupe.4G035400_v2.0.a1 |
| pyrus_communis | pycom05g30070 pycom10g25680 |
| rosa_chinensis | RchiOBHm_Chr5g0006121 |
| rosa_laevigata | RLG00000031381 |
| rosa_multiflora | Rmu_sc0004331.1_g000011 |
| rosa_roxburghii | Rroxscaffold_1G00069880 |
| rosa_rugosa | Rorug04G0419600 |
| rosa_samantha | Rh5AG047400 Rh5BG046100 Rh5CG054800 Rh5DG045900 |
| rosa_wichuraiana | Rw5G004730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 401 |
| AciI | CCGC | 1 cut(s) | 83 |
| AcsI | RAATTY | 1 cut(s) | 283 |
| AcuI | CTGAAG | 1 cut(s) | 32 |
| AfaI | GTAC | 1 cut(s) | 91 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 108, 109, 412 |
| AgsI | TTSAA | 3 cut(s) | 68, 283, 376 |
| AjiI | CACGTC | 1 cut(s) | 59 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 120, 152 |
| AluBI | AGCT | 3 cut(s) | 212, 331, 427 |
| AluI | AGCT | 3 cut(s) | 212, 331, 427 |
| Alw26I | GTCTC | 2 cut(s) | 123, 239 |
| ApoI | RAATTY | 1 cut(s) | 283 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 252 |
| AsuHPI | GGTGA | 1 cut(s) | 30 |
| BbsI | GAAGAC | 2 cut(s) | 56, 139 |
| BceAI | ACGGC | 1 cut(s) | 12 |
| BcoDI | GTCTC | 2 cut(s) | 123, 239 |
| BfaI | CTAG | 2 cut(s) | 74, 203 |
| BmgBI | CACGTC | 1 cut(s) | 59 |
| BmsI | GCATC | 1 cut(s) | 305 |
| BpiI | GAAGAC | 2 cut(s) | 56, 139 |
| BpmI | CTGGAG | 1 cut(s) | 392 |
| BsaI | GGTCTC | 1 cut(s) | 239 |
| BsaWI | WCCGGW | 1 cut(s) | 230 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 108, 109, 412 |
| Bse1I | ACTGG | 2 cut(s) | 359, 409 |
| BseGI | GGATG | 2 cut(s) | 320, 421 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 108, 109, 412 |
| BseMII | CTCAG | 3 cut(s) | 250, 281, 414 |
| BseNI | ACTGG | 2 cut(s) | 359, 409 |
| BseRI | GAGGAG | 1 cut(s) | 341 |
| BseYI | CCCAGC | 1 cut(s) | 338 |
| BsiSI | CCGG | 1 cut(s) | 231 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 108, 109, 412 |
| BsmAI | GTCTC | 2 cut(s) | 123, 239 |
| Bso31I | GGTCTC | 1 cut(s) | 239 |
| BspACI | CCGC | 1 cut(s) | 83 |
| BspCNI | CTCAG | 3 cut(s) | 249, 282, 415 |
| BspTNI | GGTCTC | 1 cut(s) | 239 |
| BsrI | ACTGG | 2 cut(s) | 359, 409 |
| BstDEI | CTNAG | 3 cut(s) | 236, 290, 423 |
| BstF5I | GGATG | 2 cut(s) | 320, 421 |
| BstMAI | GTCTC | 2 cut(s) | 123, 239 |
| BstV2I | GAAGAC | 2 cut(s) | 56, 139 |
| BtrI | CACGTC | 1 cut(s) | 59 |
| BtsCI | GGATG | 2 cut(s) | 320, 421 |
| BtsIMutI | CAGTG | 1 cut(s) | 416 |
| Csp6I | GTAC | 1 cut(s) | 90 |
| CviAII | CATG | 2 cut(s) | 105, 125 |
| CviJI | RGCY | 5 cut(s) | 16, 27, 212, 331, 427 |
| CviKI_1 | RGCY | 5 cut(s) | 16, 27, 212, 331, 427 |
| CviQI | GTAC | 1 cut(s) | 90 |
| DdeI | CTNAG | 3 cut(s) | 236, 290, 423 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 401 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 401 |
| Eco31I | GGTCTC | 1 cut(s) | 239 |
| Eco32I | GATATC | 2 cut(s) | 273, 300 |
| Eco57I | CTGAAG | 1 cut(s) | 32 |
| EcoRV | GATATC | 2 cut(s) | 273, 300 |
| FaeI | CATG | 2 cut(s) | 108, 128 |
| FaiI | YATR | 4 cut(s) | 106, 126, 259, 349 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 175, 207 |
| FatI | CATG | 2 cut(s) | 104, 124 |
| FokI | GGATG | 2 cut(s) | 327, 428 |
| FspBI | CTAG | 2 cut(s) | 74, 203 |
| GsaI | CCCAGC | 1 cut(s) | 342 |
| GsuI | CTGGAG | 1 cut(s) | 392 |
| HapII | CCGG | 1 cut(s) | 231 |
| Hin1II | CATG | 2 cut(s) | 108, 128 |
| HinfI | GANTC | 2 cut(s) | 395, 419 |
| HpaII | CCGG | 1 cut(s) | 231 |
| HphI | GGTGA | 1 cut(s) | 30 |
| Hpy188I | TCNGA | 2 cut(s) | 304, 424 |
| Hpy188III | TCNNGA | 1 cut(s) | 245 |
| Hpy99I | CGWCG | 2 cut(s) | 63, 280 |
| HpyAV | CCTTC | 5 cut(s) | 52, 172, 305, 337, 358 |
| HpyCH4IV | ACGT | 1 cut(s) | 58 |
| HpyCH4V | TGCA | 2 cut(s) | 33, 108 |
| HpyF3I | CTNAG | 3 cut(s) | 236, 290, 423 |
| HpySE526I | ACGT | 1 cut(s) | 58 |
| Hsp92II | CATG | 2 cut(s) | 108, 128 |
| LmnI | GCTCC | 1 cut(s) | 328 |
| LpnPI | CCDG | 7 cut(s) | 94, 198, 203, 244, 324, 340, 422 |
| LweI | GCATC | 1 cut(s) | 305 |
| MaeI | CTAG | 2 cut(s) | 74, 203 |
| MaeII | ACGT | 1 cut(s) | 58 |
| MaeIII | GTNAC | 1 cut(s) | 350 |
| MboII | GAAGA | 4 cut(s) | 56, 144, 187, 218 |
| MluCI | AATT | 2 cut(s) | 283, 321 |
| MlyI | GAGTC | 1 cut(s) | 389 |
| MmeI | TCCRAC | 1 cut(s) | 75 |
| MnlI | CCTC | 4 cut(s) | 56, 138, 319, 416 |
| MroXI | GAANNNNTTC | 1 cut(s) | 252 |
| MseI | TTAA | 3 cut(s) | 197, 266, 433 |
| MspI | CCGG | 1 cut(s) | 231 |
| NlaIII | CATG | 2 cut(s) | 108, 128 |
| NmuCI | GTSAC | 1 cut(s) | 350 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 275 |
| PdmI | GAANNNNTTC | 1 cut(s) | 252 |
| PfeI | GAWTC | 1 cut(s) | 419 |
| PleI | GAGTC | 1 cut(s) | 389 |
| PpsI | GAGTC | 1 cut(s) | 389 |
| PspFI | CCCAGC | 1 cut(s) | 338 |
| RsaI | GTAC | 1 cut(s) | 91 |
| RsaNI | GTAC | 1 cut(s) | 90 |
| SaqAI | TTAA | 3 cut(s) | 197, 266, 433 |
| SchI | GAGTC | 1 cut(s) | 389 |
| SetI | ASST | 7 cut(s) | 61, 75, 193, 214, 333, 348, 429 |
| SfaNI | GCATC | 1 cut(s) | 305 |
| Sse9I | AATT | 2 cut(s) | 283, 321 |
| SsiI | CCGC | 1 cut(s) | 83 |
| SspMI | CTAG | 2 cut(s) | 74, 203 |
| TaiI | ACGT | 1 cut(s) | 61 |
| TasI | AATT | 2 cut(s) | 283, 321 |
| TfiI | GAWTC | 1 cut(s) | 419 |
| Tru1I | TTAA | 3 cut(s) | 197, 266, 433 |
| Tru9I | TTAA | 3 cut(s) | 197, 266, 433 |
| TscAI | CASTG | 1 cut(s) | 416 |
| TseFI | GTSAC | 1 cut(s) | 350 |
| Tsp45I | GTSAC | 1 cut(s) | 350 |
| TspDTI | ATGAA | 1 cut(s) | 141 |
| TspRI | CASTG | 1 cut(s) | 416 |
| XapI | RAATTY | 1 cut(s) | 283 |
| XmnI | GAANNNNTTC | 1 cut(s) | 252 |
| XspI | CTAG | 2 cut(s) | 74, 203 |