MD06G1009000.v1.1

Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
Physical Location & Seq
Reverse (-)
1028933 .. 1032879
3947 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1009000.v1.1.491

Sequence Viewer

Length: 1479 bp
ATGGATCCTTACAGGCACCGCCCTTCAAGTGCTTTCAATTCCCCGTTCTGGACCACCAATTCTGGTGCTCCAGTTTGGAACAACAACTCTTCTCTCACTGTTGGACCCAGAGGTCCAATTCTGCTTGAGGACTACCATCTGGTGGAGAAACTCGCCAATTTTGATAGAGAACGGATCCCAGAGCGTGTTGTCCATGCTAGGGGAGCCAGTGCAAAAGGTTTCTTTGAGGTCACCCATGATATTTCTCACCTTTCATGTGCTGACTTCCTTCGAGCCCCTGGAGTTCAGACACCTGTCATTGTGCGTTTCTCCACTGTTATCCATGAGCGTGGCAGCCCTGAAACCCTGAGGGATCCTCGTGGTTTTGCAGTGAAGTTTTACACCAGAGAGGGTAATTTTGACTTGGTGGGAAACAATTTCCCCGTCTTTTTTGTCCGTGATGGAATGAAATTCCCGGACATGGTCCATGCTCTCAAACCGAACCCTAAGTCCCACATCCAAGAGAATTGGAGGATCCTTGACTTCTTCTCCCACCATCCAGAAAGCCTGCACATGTTCACCTTCCTATTGGATGACCTGGGAGTTCCACAAGATTACAGGCACATGGAAGGGTCTGGTGTTAACACCTATACTCTTATCAGTAAGACCGGGAAGGCACACTACGTGAAATTTCATTGGAAACCCACTTGTGGAGTCAAGTGTTTGTTGGAGGATGAGGCTATCAAGGTTGGAGGAGCAAATCACAGCCACGCTACCCAGGATCTCTATGACTCCATCGCAGCTGGCAACTACCCGGAGTGGAAACTTTTTATTCAGACAATTGATCCTGATCATGAAGACAGATTTGACTTTGACCCACTTGATGTTACTAAGACCTGGCCTGAAGATATTCTTCCCCTGCAGCCAGTTGGACGTTTGGTACTGAATAAGAACATTGATAACTTCTTTGCAGAGAATGAACAACTAGCTTTCTGCCCTGCCATTGTTGTCCCTGGTGTCTATTATTCAGATGATAAGTTGCTCCAAACTCGAATCTTCTCCTATTCTGATACTCAGAGGCACCGTCTTGGCCCGAACTATCTGCAGCTCCCAGTTAATGCTCCCAAGTGTTCTCATCACAACAATCACCATGAAGGGTTTATGAATTTCATGCACAGAGATGAGGAGGTTAACTACTTCCCATCAAGGTATGATCCTGTTCGCCATGCTGAGACCTTCCCAATTCCTTCTAATATTTGCACTGGAAAGCGTGAGAAGTGCGTCATTGAGAAGGAGAACAACTTCAAGCAACCTGGAGAGAGATACAGATCTTGGGCACCCGACAGGCAAGAGCGATTCCTCCACCGATGGGTTGATGCCCTATCCGATCCTCGTGTCACCTATGAAATTCGCAGCATTTGGATCTCATACTGGTCTCAGGCTGACCGATCTTTTGGTCAAAAACTGGCATCTCGTCTTAACGTGAGGCCGAGCATTTGA

Protein Analysis

493

Amino Acids

56.97

Weight (kDa)

6.68

Isoelectric Point (pI)

39.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Catalase PF00199 18 - 397 4e-173 Catalase
Catalase-rel PF06628 423 - 486 1.8e-13 Catalase-related immune-responsive
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010839)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 111
AccB1I GGYRCC 3 cut(s) 15, 1059, 1315
AccB7I CCANNNNNTGG 1 cut(s) 142
AciI CCGC 1 cut(s) 19
AcsI RAATTY 4 cut(s) 449, 668, 1144, 1386
AcuI CTGAAG 1 cut(s) 903
AdeI CACNNNGTG 1 cut(s) 664
AfaI GTAC 1 cut(s) 921
AfiI CCNNNNNNNGG 6 cut(s) 48, 142, 199, 460, 689, 1348
AflIII ACRYGT 1 cut(s) 552
AgsI TTSAA 3 cut(s) 27, 37, 1285
AjnI CCWGG 6 cut(s) 277, 576, 756, 875, 991, 1291
AloI GAACNNNNNNTCC 2 cut(s) 473, 505
AluBI AGCT 3 cut(s) 782, 968, 1087
AluI AGCT 3 cut(s) 782, 968, 1087
Alw21I GWGCWC 1 cut(s) 70
Alw26I GTCTC 2 cut(s) 1205, 1419
AoxI GGCC 3 cut(s) 878, 1069, 1466
ApeKI GCWGC 5 cut(s) 333, 779, 901, 1084, 1392
ApoI RAATTY 4 cut(s) 449, 668, 1144, 1386
ArsI GACNNNNNNTTYG 4 cut(s) 473, 505, 1415, 1447
Asp700I GAANNNNTTC 2 cut(s) 888, 1280
AspS9I GGNCC 5 cut(s) 51, 104, 113, 463, 1070
AsuC2I CCSGG 3 cut(s) 455, 649, 794
AsuHPI GGTGA 5 cut(s) 223, 239, 550, 1118, 1369
AvaII GGWCC 4 cut(s) 51, 104, 113, 463
AxyI CCTNAGG 1 cut(s) 347
BaeGI GKGCMC 1 cut(s) 1318
BamHI GGATCC 4 cut(s) 4, 174, 352, 513
BanI GGYRCC 3 cut(s) 15, 1059, 1315
BanII GRGCYC 1 cut(s) 277
BarI GAAGNNNNNNTAC 2 cut(s) 644, 676
BauI CACGAG 2 cut(s) 357, 1371
BbsI GAAGAC 1 cut(s) 843
Bbv12I GWGCWC 1 cut(s) 70
BbvI GCAGC 5 cut(s) 345, 791, 913, 1096, 1404
BccI CCATC 6 cut(s) 144, 434, 543, 782, 1189, 1341
BcgI CGANNNNNNTGC 2 cut(s) 1063, 1097
BciT130I CCWGG 6 cut(s) 279, 578, 758, 877, 993, 1293
BclI TGATCA 1 cut(s) 829
BcnI CCSGG 3 cut(s) 455, 649, 794
BcoDI GTCTC 2 cut(s) 1205, 1419
BfaI CTAG 2 cut(s) 198, 965
BfmI CTRYAG 2 cut(s) 899, 1082
BglII AGATCT 1 cut(s) 1307
BisI GCNGC 5 cut(s) 334, 780, 902, 1085, 1393
BlsI GCNGC 5 cut(s) 335, 781, 903, 1086, 1394
Bme1390I CCNGG 9 cut(s) 279, 455, 578, 649, 758, 794, 877, 993, 1293
Bme18I GGWCC 4 cut(s) 51, 104, 113, 463
BmgT120I GGNCC 5 cut(s) 51, 104, 113, 463, 1070
BmiI GGNNCC 9 cut(s) 6, 17, 106, 176, 205, 354, 515, 1061, 1317
BmrFI CCNGG 9 cut(s) 279, 455, 578, 649, 758, 794, 877, 993, 1293
BmrI ACTGGG 1 cut(s) 1085
BmsI GCATC 2 cut(s) 1345, 1457
BmuI ACTGGG 1 cut(s) 1085
BoxI GACNNNNGTC 1 cut(s) 293
BpiI GAAGAC 1 cut(s) 843
BplI GAGNNNNNCTC 2 cut(s) 340, 372
BpmI CTGGAG 3 cut(s) 54, 300, 1314
BpuEI CTTGAG 1 cut(s) 146
BpuMI CCSGG 3 cut(s) 455, 649, 794
BsaAI YACGTR 1 cut(s) 664
BsaBI GATNNNNATC 2 cut(s) 828, 1306
BsaI GGTCTC 2 cut(s) 1205, 1419
BsaJI CCNNGG 4 cut(s) 277, 577, 756, 991
BsaXI ACNNNNNCTCC 2 cut(s) 512, 542
Bsc4I CCNNNNNNNGG 6 cut(s) 48, 142, 199, 460, 689, 1348
Bse1I ACTGG 7 cut(s) 71, 207, 905, 1091, 1246, 1415, 1449
Bse21I CCTNAGG 1 cut(s) 347
Bse8I GATNNNNATC 2 cut(s) 828, 1306
BseBI CCWGG 6 cut(s) 279, 578, 758, 877, 993, 1293
BseDI CCNNGG 4 cut(s) 277, 577, 756, 991
BseGI GGATG 4 cut(s) 495, 535, 577, 718
BseJI GATNNNNATC 2 cut(s) 828, 1306
BseLI CCNNNNNNNGG 6 cut(s) 48, 142, 199, 460, 689, 1348
BseMII CTCAG 4 cut(s) 338, 1067, 1200, 1430
BseNI ACTGG 7 cut(s) 71, 207, 905, 1091, 1246, 1415, 1449
BseRI GAGGAG 2 cut(s) 747, 1178
BseSI GKGCMC 1 cut(s) 1318
BseXI GCAGC 5 cut(s) 345, 791, 913, 1096, 1404
BsgI GTGCAG 1 cut(s) 533
BshFI GGCC 3 cut(s) 880, 1071, 1468
BshNI GGYRCC 3 cut(s) 15, 1059, 1315
BsiHKAI GWGCWC 1 cut(s) 70
BsiSI CCGG 3 cut(s) 455, 648, 794
BslFI GGGAC 2 cut(s) 475, 974
BslI CCNNNNNNNGG 6 cut(s) 48, 142, 199, 460, 689, 1348
BsmAI GTCTC 2 cut(s) 1205, 1419
BsmFI GGGAC 2 cut(s) 475, 974
BsnI GGCC 3 cut(s) 880, 1071, 1468
Bso31I GGTCTC 2 cut(s) 1205, 1419
Bsp1286I GDGCHC 3 cut(s) 70, 277, 1318
BspACI CCGC 1 cut(s) 19
BspANI GGCC 3 cut(s) 880, 1071, 1468
BspCNI CTCAG 4 cut(s) 339, 1066, 1201, 1429
BspHI TCATGA 1 cut(s) 832
BspLI GGNNCC 9 cut(s) 6, 17, 106, 176, 205, 354, 515, 1061, 1317
BspMAI CTGCAG 2 cut(s) 903, 1086
BspT107I GGYRCC 3 cut(s) 15, 1059, 1315
BspTNI GGTCTC 2 cut(s) 1205, 1419
BsrI ACTGG 7 cut(s) 71, 207, 905, 1091, 1246, 1415, 1449
BssECI CCNNGG 4 cut(s) 277, 577, 756, 991
BssSI CACGAG 2 cut(s) 357, 1371
Bst2BI CACGAG 2 cut(s) 357, 1371
Bst2UI CCWGG 6 cut(s) 279, 578, 758, 877, 993, 1293
Bst4CI ACNGT 3 cut(s) 100, 316, 1064
Bst6I CTCTTC 1 cut(s) 94
BstBAI YACGTR 1 cut(s) 664
BstC8I GCNNGC 2 cut(s) 548, 784
BstDEI CTNAG 6 cut(s) 347, 486, 870, 1053, 1209, 1416
BstEII GGTNACC 1 cut(s) 229
BstF5I GGATG 4 cut(s) 495, 535, 577, 718
BstMAI GTCTC 2 cut(s) 1205, 1419
BstMWI GCNNNNNNNGC 1 cut(s) 203
BstNI CCWGG 6 cut(s) 279, 578, 758, 877, 993, 1293
BstNSI RCATGY 1 cut(s) 556
BstPAI GACNNNNGTC 1 cut(s) 293
BstPI GGTNACC 1 cut(s) 229
BstSCI CCNGG 9 cut(s) 277, 453, 576, 647, 756, 792, 875, 991, 1291
BstSFI CTRYAG 2 cut(s) 899, 1082
BstSLI GKGCMC 1 cut(s) 1318
BstV1I GCAGC 5 cut(s) 345, 791, 913, 1096, 1404
BstV2I GAAGAC 1 cut(s) 843
BstX2I RGATCY 7 cut(s) 4, 174, 352, 513, 760, 1307, 1401
BstXI CCANNNNNNTGG 1 cut(s) 329
BstYI RGATCY 7 cut(s) 4, 174, 352, 513, 760, 1307, 1401
Bsu36I CCTNAGG 1 cut(s) 347
BsuRI GGCC 3 cut(s) 880, 1071, 1468
BtgZI GCGATG 1 cut(s) 760
BtsCI GGATG 4 cut(s) 495, 535, 577, 718
BtsI GCAGTG 1 cut(s) 375
BtsIMutI CAGTG 5 cut(s) 96, 214, 312, 375, 1239
Cac8I GCNNGC 2 cut(s) 548, 784
CciI TCATGA 1 cut(s) 832
Cfr13I GGNCC 5 cut(s) 51, 104, 113, 463, 1070
CseI GACGC 1 cut(s) 1249
Csp6I GTAC 1 cut(s) 920
CviQI GTAC 1 cut(s) 920
DdeI CTNAG 6 cut(s) 347, 486, 870, 1053, 1209, 1416
DraIII CACNNNGTG 1 cut(s) 664
DrdI GACNNNNNNGTC 1 cut(s) 111
DseDI GACNNNNNNGTC 1 cut(s) 111
Eam1104I CTCTTC 1 cut(s) 94
EarI CTCTTC 1 cut(s) 94
Eco24I GRGCYC 1 cut(s) 277
Eco31I GGTCTC 2 cut(s) 1205, 1419
Eco47I GGWCC 4 cut(s) 51, 104, 113, 463
Eco57I CTGAAG 1 cut(s) 903
Eco81I CCTNAGG 1 cut(s) 347
Eco91I GGTNACC 1 cut(s) 229
EcoO65I GGTNACC 1 cut(s) 229
EcoRII CCWGG 6 cut(s) 277, 576, 756, 875, 991, 1291
EcoT38I GRGCYC 1 cut(s) 277
FalI AAGNNNNNCTT 2 cut(s) 876, 908
FaqI GGGAC 2 cut(s) 475, 974
FbaI TGATCA 1 cut(s) 829
Fnu4HI GCNGC 5 cut(s) 334, 780, 902, 1085, 1393
FokI GGATG 4 cut(s) 482, 522, 584, 725
FriOI GRGCYC 1 cut(s) 277
Fsp4HI GCNGC 5 cut(s) 334, 780, 902, 1085, 1393
FspBI CTAG 2 cut(s) 198, 965
GluI GCNGC 5 cut(s) 334, 780, 902, 1085, 1393
GsuI CTGGAG 3 cut(s) 54, 300, 1314
HaeIII GGCC 3 cut(s) 880, 1071, 1468
HapII CCGG 3 cut(s) 455, 648, 794
HgaI GACGC 1 cut(s) 1249
HincII GTYRAC 2 cut(s) 622, 1171
HindII GTYRAC 2 cut(s) 622, 1171
HinfI GANTC 4 cut(s) 693, 770, 1032, 1335
HpaI GTTAAC 2 cut(s) 622, 1171
HpaII CCGG 3 cut(s) 455, 648, 794
HphI GGTGA 5 cut(s) 223, 239, 550, 1118, 1369
Hpy166II GTNNAC 3 cut(s) 558, 622, 1171
Hpy188I TCNGA 6 cut(s) 288, 816, 1009, 1048, 1056, 1366
Hpy188III TCNNGA 4 cut(s) 49, 539, 827, 833
Hpy8I GTNNAC 3 cut(s) 558, 622, 1171
HpyAV CCTTC 9 cut(s) 33, 278, 571, 602, 646, 1127, 1225, 1236, 1264
HpyCH4III ACNGT 3 cut(s) 100, 316, 1064
HpyCH4IV ACGT 3 cut(s) 663, 913, 1461
HpyCH4V TGCA 8 cut(s) 212, 368, 550, 901, 950, 1084, 1153, 1239
HpyF10VI GCNNNNNNNGC 1 cut(s) 203
HpyF3I CTNAG 6 cut(s) 347, 486, 870, 1053, 1209, 1416
HpySE526I ACGT 3 cut(s) 663, 913, 1461
Ksp22I TGATCA 1 cut(s) 829
KspAI GTTAAC 2 cut(s) 622, 1171
LmnI GCTCC 6 cut(s) 73, 203, 734, 1026, 1092, 1105
Lsp1109I GCAGC 5 cut(s) 345, 791, 913, 1096, 1404
LweI GCATC 2 cut(s) 1345, 1457
MaeI CTAG 2 cut(s) 198, 965
MaeII ACGT 3 cut(s) 663, 913, 1461
MaeIII GTNAC 3 cut(s) 229, 865, 1375
MboII GAAGA 6 cut(s) 81, 517, 848, 884, 896, 1027
MfeI CAATTG 1 cut(s) 819
MflI RGATCY 7 cut(s) 4, 174, 352, 513, 760, 1307, 1401
MhlI GDGCHC 3 cut(s) 70, 277, 1318
MlyI GAGTC 2 cut(s) 702, 764
MmeI TCCRAC 4 cut(s) 82, 687, 709, 889
MroXI GAANNNNTTC 2 cut(s) 888, 1280
MseI TTAA 4 cut(s) 621, 1095, 1170, 1458
MslI CAYNNNNRTG 2 cut(s) 327, 1158
MspA1I CMGCKG 1 cut(s) 782
MspI CCGG 3 cut(s) 455, 648, 794
MspR9I CCNGG 9 cut(s) 279, 455, 578, 649, 758, 794, 877, 993, 1293
MunI CAATTG 1 cut(s) 819
MvaI CCWGG 6 cut(s) 279, 578, 758, 877, 993, 1293
MwoI GCNNNNNNNGC 1 cut(s) 203
NciI CCSGG 3 cut(s) 455, 649, 794
NlaIV GGNNCC 9 cut(s) 6, 17, 106, 176, 205, 354, 515, 1061, 1317
NmuCI GTSAC 2 cut(s) 229, 1375
NspI RCATGY 1 cut(s) 556
PagI TCATGA 1 cut(s) 832
PciI ACATGT 1 cut(s) 552
PdmI GAANNNNTTC 2 cut(s) 888, 1280
PfeI GAWTC 2 cut(s) 1032, 1335
PflFI GACNNNGTC 1 cut(s) 461
PflMI CCANNNNNTGG 1 cut(s) 142
PfoI TCCNGGA 1 cut(s) 453
PkrI GCNGC 5 cut(s) 335, 781, 903, 1086, 1394
PleI GAGTC 2 cut(s) 701, 764
PpsI GAGTC 2 cut(s) 701, 764
Ppu21I YACGTR 1 cut(s) 664
PscI ACATGT 1 cut(s) 552
PshAI GACNNNNGTC 1 cut(s) 293
Psp6I CCWGG 6 cut(s) 277, 576, 756, 875, 991, 1291
PspEI GGTNACC 1 cut(s) 229
PspGI CCWGG 6 cut(s) 277, 576, 756, 875, 991, 1291
PspN4I GGNNCC 9 cut(s) 6, 17, 106, 176, 205, 354, 515, 1061, 1317
PspPI GGNCC 5 cut(s) 51, 104, 113, 463, 1070
PstI CTGCAG 2 cut(s) 903, 1086
PsuI RGATCY 7 cut(s) 4, 174, 352, 513, 760, 1307, 1401
PsyI GACNNNGTC 1 cut(s) 461
PvuII CAGCTG 1 cut(s) 782
RsaI GTAC 1 cut(s) 921
RsaNI GTAC 1 cut(s) 920
RseI CAYNNNNRTG 2 cut(s) 327, 1158
SaqAI TTAA 4 cut(s) 621, 1095, 1170, 1458
SatI GCNGC 5 cut(s) 334, 780, 902, 1085, 1393
Sau96I GGNCC 5 cut(s) 51, 104, 113, 463, 1070
SchI GAGTC 2 cut(s) 702, 764
ScrFI CCNGG 9 cut(s) 279, 455, 578, 649, 758, 794, 877, 993, 1293
SduI GDGCHC 3 cut(s) 70, 277, 1318
SfaNI GCATC 2 cut(s) 1345, 1457
SfcI CTRYAG 2 cut(s) 899, 1082
SinI GGWCC 4 cut(s) 51, 104, 113, 463
SmiMI CAYNNNNRTG 2 cut(s) 327, 1158
SmlI CTYRAG 1 cut(s) 125
SmoI CTYRAG 1 cut(s) 125
SsiI CCGC 1 cut(s) 19
SspI AATATT 1 cut(s) 1234
SspMI CTAG 2 cut(s) 198, 965
StyD4I CCNGG 9 cut(s) 277, 453, 576, 647, 756, 792, 875, 991, 1291
TaaI ACNGT 3 cut(s) 100, 316, 1064
TaiI ACGT 3 cut(s) 666, 916, 1464
TaqI TCGA 2 cut(s) 271, 1030
TaqII GACCGA 1 cut(s) 1440
TfiI GAWTC 2 cut(s) 1032, 1335
Tru1I TTAA 4 cut(s) 621, 1095, 1170, 1458
Tru9I TTAA 4 cut(s) 621, 1095, 1170, 1458
TscAI CASTG 5 cut(s) 103, 214, 319, 375, 1246
TseFI GTSAC 2 cut(s) 229, 1375
TseI GCWGC 5 cut(s) 333, 779, 901, 1084, 1392
Tsp45I GTSAC 2 cut(s) 229, 1375
TspDTI ATGAA 9 cut(s) 243, 461, 662, 849, 972, 1138, 1146, 1157, 1398
TspGWI ACGGA 2 cut(s) 187, 425
TspRI CASTG 5 cut(s) 103, 214, 319, 375, 1246
Tth111I GACNNNGTC 1 cut(s) 461
Van91I CCANNNNNTGG 1 cut(s) 142
VpaK11BI GGWCC 4 cut(s) 51, 104, 113, 463
XapI RAATTY 4 cut(s) 449, 668, 1144, 1386
XceI RCATGY 1 cut(s) 556
XmnI GAANNNNTTC 2 cut(s) 888, 1280
XspI CTAG 2 cut(s) 198, 965
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.