pycom06g00720

Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Reverse (-)
661476 .. 664748
3273 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g00720.4

Sequence Viewer

Length: 1524 bp
ATGGATCCTTACAGGCACCGCCCTTCAAGTGCTTTCAATTCCCCGTTCTGGACCACCAATTCCGGTGCTCCAGTTTCAAACAACAACTCTTCTCTGACTGTTGGACCCAGAGGTCCAATTCTGCTTGAGGACTACCATCTGGTGGAGAAACTCGCCAATTTTGATAGAGAACGGATCCCAGAGCGTGTTGTCCATGCTAGGGGAGCCAGTGCAAAAGGTTTCTTTGAGGTCACCCATGACATTTCTCATCTTTCATGTGCTGACTTCCTTCGAGCCCCTGGAGTTCAGACACCTGTCATTGTGCGTTTCTCCACTGTTATCCATGAGCGTGGCAGCCCTGAAACCCTGAGGGATCCTCGTGGTTTTGCAGTGAAGTTTTACACCAGAGAGGGTAATTTTGACTTGGTGGGAAACAATTTTCCCGTCTTTTTTGTCCGTGATGGAATGAAATTCCCAGACATGGTCCATGCTCTCAAACCGAACCCTAAGTCCCACATCCAAGAGAATTGGAGGATCCTTGACTTCTTCTCCCACCATCCAGAAAGCCTGCACATGTTCACCTTCCTATTGGATGACCTGGGAGTTCCACAAGATTACAGGCACATGGAAGGGTCTGGTGTTAACACCTATACTCTTATCAGTAAGACCGGGAAGGCACACTATGTGAAATTTCATTGGAAACCCACTTGTGGAGTCAAGTGTTTGTTGGAGGATGAGGCTATTAAGGTTGGAGGAGCTAATCACAGCCACGCTACCAAGGATCTCTATGACTCCATCGCAGCTGGCAACTACCCGGAGTGGAAACTCTTTATTCAGACAATTGATCCTGATCATGAAGACAGATTTGACTTTGACCCACTTGATGTTTGTAAGATCTGGCCTGAAGATATTCTTCCCCTGCAGCCAGTTGGACGTTTGGTACTGAATAAGAACATTGATAACTTCTTTGCAGAGAATGAACAACTTGCTTTCTGCCCTGCCATTGTTGTCCCTGGTGTCTATTATTCAGATGATAAGTTGCTCCAAACTCGAATCTTCTCCTATTCTGATACTCAGAGGCACCGTCTTGGCCCGAACTATCTGCAGCTCCCAGTTAATGCTCCCAAGTGTTCTCATCACAACAATCACCATGAAGGATTTATGAATTTCATGCACAGAGATGAGGAGCACTTGGAATGTAAAAAGTTAGATACATGCATGAATGCTTGTTGCATTTCTGAATCCTTTTGGTGTGCTGCACATCATGATTCATGTAGCAACTTTGCGTTTAATTTGTGTATGGTGGTTTTGTTGGATATGCAGTGCGTCATTGATAAGGAGAACAACTTCAAGCAACCTGGAGAGAGATACAGATCTTGGGCACCCGACAGGCAAGAGCGATTCCTCCACCGATGGGTTGATGCCCTATCCGATCCTCGTGTCACCTATGAAATTCGCAGCATTTGGATCTCATACTGGTCTCAGGCTGATCGATCTTTTGGTCAAAAACTGGCATCTCGTCTTAACGTGAAGCCGAGCATTTGA

Protein Analysis

508

Amino Acids

58.43

Weight (kDa)

6.38

Isoelectric Point (pI)

35.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010839)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 111
AccB1I GGYRCC 3 cut(s) 15, 1059, 1360
AccB7I CCANNNNNTGG 1 cut(s) 142
AciI CCGC 1 cut(s) 19
AcsI RAATTY 4 cut(s) 449, 668, 1144, 1431
AcuI CTGAAG 1 cut(s) 903
AdeI CACNNNGTG 1 cut(s) 664
AfaI GTAC 1 cut(s) 921
AfiI CCNNNNNNNGG 6 cut(s) 48, 142, 199, 460, 689, 1393
AflIII ACRYGT 1 cut(s) 552
AgsI TTSAA 4 cut(s) 27, 37, 78, 1330
AjnI CCWGG 4 cut(s) 277, 576, 991, 1336
AloI GAACNNNNNNTCC 2 cut(s) 473, 505
AluBI AGCT 3 cut(s) 737, 782, 1087
AluI AGCT 3 cut(s) 737, 782, 1087
Alw21I GWGCWC 2 cut(s) 70, 1170
Alw26I GTCTC 1 cut(s) 1464
AoxI GGCC 2 cut(s) 878, 1069
ApeKI GCWGC 6 cut(s) 333, 779, 901, 1084, 1235, 1437
ApoI RAATTY 4 cut(s) 449, 668, 1144, 1431
ArsI GACNNNNNNTTYG 2 cut(s) 473, 505
Asp700I GAANNNNTTC 2 cut(s) 888, 1325
AspS9I GGNCC 5 cut(s) 51, 104, 113, 463, 1070
AsuC2I CCSGG 2 cut(s) 649, 794
AsuHPI GGTGA 4 cut(s) 223, 550, 1118, 1414
AvaII GGWCC 4 cut(s) 51, 104, 113, 463
AxyI CCTNAGG 1 cut(s) 347
BaeGI GKGCMC 1 cut(s) 1363
BamHI GGATCC 4 cut(s) 4, 174, 352, 513
BanI GGYRCC 3 cut(s) 15, 1059, 1360
BanII GRGCYC 1 cut(s) 277
BauI CACGAG 2 cut(s) 357, 1416
BbsI GAAGAC 1 cut(s) 843
Bbv12I GWGCWC 2 cut(s) 70, 1170
BbvI GCAGC 6 cut(s) 345, 791, 913, 1096, 1222, 1449
BccI CCATC 5 cut(s) 144, 434, 543, 782, 1386
BcgI CGANNNNNNTGC 2 cut(s) 1063, 1097
BciT130I CCWGG 4 cut(s) 279, 578, 993, 1338
BclI TGATCA 1 cut(s) 829
BcnI CCSGG 2 cut(s) 649, 794
BcoDI GTCTC 1 cut(s) 1464
BfaI CTAG 1 cut(s) 198
BfmI CTRYAG 2 cut(s) 899, 1082
BglII AGATCT 2 cut(s) 873, 1352
BisI GCNGC 6 cut(s) 334, 780, 902, 1085, 1236, 1438
BlsI GCNGC 6 cut(s) 335, 781, 903, 1086, 1237, 1439
Bme1390I CCNGG 6 cut(s) 279, 578, 649, 794, 993, 1338
Bme18I GGWCC 4 cut(s) 51, 104, 113, 463
BmgT120I GGNCC 5 cut(s) 51, 104, 113, 463, 1070
BmiI GGNNCC 9 cut(s) 6, 17, 106, 176, 205, 354, 515, 1061, 1362
BmrFI CCNGG 6 cut(s) 279, 578, 649, 794, 993, 1338
BmrI ACTGGG 1 cut(s) 1085
BmsI GCATC 2 cut(s) 1390, 1502
BmuI ACTGGG 1 cut(s) 1085
BoxI GACNNNNGTC 1 cut(s) 293
BpiI GAAGAC 1 cut(s) 843
BplI GAGNNNNNCTC 2 cut(s) 340, 372
BpmI CTGGAG 3 cut(s) 54, 300, 1359
BpuEI CTTGAG 1 cut(s) 146
BpuMI CCSGG 2 cut(s) 649, 794
Bsa29I ATCGAT 1 cut(s) 1471
BsaBI GATNNNNATC 2 cut(s) 828, 1351
BsaI GGTCTC 1 cut(s) 1464
BsaJI CCNNGG 4 cut(s) 277, 577, 756, 991
BsaWI WCCGGW 1 cut(s) 62
BsaXI ACNNNNNCTCC 2 cut(s) 512, 542
Bsc4I CCNNNNNNNGG 6 cut(s) 48, 142, 199, 460, 689, 1393
Bse1I ACTGG 6 cut(s) 71, 207, 905, 1091, 1460, 1494
Bse21I CCTNAGG 1 cut(s) 347
Bse8I GATNNNNATC 2 cut(s) 828, 1351
BseBI CCWGG 4 cut(s) 279, 578, 993, 1338
BseCI ATCGAT 1 cut(s) 1471
BseDI CCNNGG 4 cut(s) 277, 577, 756, 991
BseGI GGATG 4 cut(s) 495, 535, 577, 718
BseJI GATNNNNATC 2 cut(s) 828, 1351
BseLI CCNNNNNNNGG 6 cut(s) 48, 142, 199, 460, 689, 1393
BseMII CTCAG 3 cut(s) 338, 1067, 1475
BseNI ACTGG 6 cut(s) 71, 207, 905, 1091, 1460, 1494
BseRI GAGGAG 2 cut(s) 747, 1178
BseSI GKGCMC 1 cut(s) 1363
BseXI GCAGC 6 cut(s) 345, 791, 913, 1096, 1222, 1449
BsgI GTGCAG 2 cut(s) 533, 1221
BshFI GGCC 2 cut(s) 880, 1071
BshNI GGYRCC 3 cut(s) 15, 1059, 1360
BshVI ATCGAT 1 cut(s) 1471
BsiHKAI GWGCWC 2 cut(s) 70, 1170
BsiSI CCGG 3 cut(s) 63, 648, 794
BslFI GGGAC 2 cut(s) 475, 974
BslI CCNNNNNNNGG 6 cut(s) 48, 142, 199, 460, 689, 1393
BsmAI GTCTC 1 cut(s) 1464
BsmFI GGGAC 2 cut(s) 475, 974
BsmI GAATGC 1 cut(s) 1207
BsnI GGCC 2 cut(s) 880, 1071
Bso31I GGTCTC 1 cut(s) 1464
Bsp1286I GDGCHC 4 cut(s) 70, 277, 1170, 1363
BspACI CCGC 1 cut(s) 19
BspANI GGCC 2 cut(s) 880, 1071
BspCNI CTCAG 3 cut(s) 339, 1066, 1474
BspDI ATCGAT 1 cut(s) 1471
BspHI TCATGA 2 cut(s) 832, 1243
BspLI GGNNCC 9 cut(s) 6, 17, 106, 176, 205, 354, 515, 1061, 1362
BspMAI CTGCAG 2 cut(s) 903, 1086
BspT107I GGYRCC 3 cut(s) 15, 1059, 1360
BspTNI GGTCTC 1 cut(s) 1464
BsrI ACTGG 6 cut(s) 71, 207, 905, 1091, 1460, 1494
BssECI CCNNGG 4 cut(s) 277, 577, 756, 991
BssSI CACGAG 2 cut(s) 357, 1416
BssT1I CCWWGG 1 cut(s) 756
Bst2BI CACGAG 2 cut(s) 357, 1416
Bst2UI CCWGG 4 cut(s) 279, 578, 993, 1338
Bst4CI ACNGT 3 cut(s) 100, 316, 1064
Bst6I CTCTTC 1 cut(s) 94
BstC8I GCNNGC 2 cut(s) 548, 784
BstDEI CTNAG 4 cut(s) 347, 486, 1053, 1461
BstEII GGTNACC 1 cut(s) 229
BstF5I GGATG 4 cut(s) 495, 535, 577, 718
BstMAI GTCTC 1 cut(s) 1464
BstMWI GCNNNNNNNGC 1 cut(s) 203
BstNI CCWGG 4 cut(s) 279, 578, 993, 1338
BstNSI RCATGY 2 cut(s) 556, 1197
BstPAI GACNNNNGTC 1 cut(s) 293
BstPI GGTNACC 1 cut(s) 229
BstSCI CCNGG 6 cut(s) 277, 576, 647, 792, 991, 1336
BstSFI CTRYAG 2 cut(s) 899, 1082
BstSLI GKGCMC 1 cut(s) 1363
BstV1I GCAGC 6 cut(s) 345, 791, 913, 1096, 1222, 1449
BstV2I GAAGAC 1 cut(s) 843
BstX2I RGATCY 8 cut(s) 4, 174, 352, 513, 760, 873, 1352, 1446
BstXI CCANNNNNNTGG 1 cut(s) 329
BstYI RGATCY 8 cut(s) 4, 174, 352, 513, 760, 873, 1352, 1446
Bsu15I ATCGAT 1 cut(s) 1471
Bsu36I CCTNAGG 1 cut(s) 347
BsuRI GGCC 2 cut(s) 880, 1071
BsuTUI ATCGAT 1 cut(s) 1471
BtgZI GCGATG 1 cut(s) 760
BtsCI GGATG 4 cut(s) 495, 535, 577, 718
BtsI GCAGTG 2 cut(s) 375, 1307
BtsIMutI CAGTG 4 cut(s) 214, 312, 375, 1307
Cac8I GCNNGC 2 cut(s) 548, 784
CciI TCATGA 2 cut(s) 832, 1243
Cfr13I GGNCC 5 cut(s) 51, 104, 113, 463, 1070
ClaI ATCGAT 1 cut(s) 1471
CseI GACGC 1 cut(s) 1294
Csp6I GTAC 1 cut(s) 920
CviQI GTAC 1 cut(s) 920
DdeI CTNAG 4 cut(s) 347, 486, 1053, 1461
DraIII CACNNNGTG 1 cut(s) 664
DrdI GACNNNNNNGTC 1 cut(s) 111
DseDI GACNNNNNNGTC 1 cut(s) 111
Eam1104I CTCTTC 1 cut(s) 94
EarI CTCTTC 1 cut(s) 94
Eco130I CCWWGG 1 cut(s) 756
Eco24I GRGCYC 1 cut(s) 277
Eco31I GGTCTC 1 cut(s) 1464
Eco47I GGWCC 4 cut(s) 51, 104, 113, 463
Eco57I CTGAAG 1 cut(s) 903
Eco81I CCTNAGG 1 cut(s) 347
Eco91I GGTNACC 1 cut(s) 229
EcoO65I GGTNACC 1 cut(s) 229
EcoRII CCWGG 4 cut(s) 277, 576, 991, 1336
EcoT14I CCWWGG 1 cut(s) 756
EcoT22I ATGCAT 1 cut(s) 1199
EcoT38I GRGCYC 1 cut(s) 277
ErhI CCWWGG 1 cut(s) 756
FalI AAGNNNNNCTT 2 cut(s) 876, 908
FaqI GGGAC 2 cut(s) 475, 974
FbaI TGATCA 1 cut(s) 829
Fnu4HI GCNGC 6 cut(s) 334, 780, 902, 1085, 1236, 1438
FokI GGATG 4 cut(s) 482, 522, 584, 725
FriOI GRGCYC 1 cut(s) 277
Fsp4HI GCNGC 6 cut(s) 334, 780, 902, 1085, 1236, 1438
FspBI CTAG 1 cut(s) 198
GluI GCNGC 6 cut(s) 334, 780, 902, 1085, 1236, 1438
GsuI CTGGAG 3 cut(s) 54, 300, 1359
HaeIII GGCC 2 cut(s) 880, 1071
HapII CCGG 3 cut(s) 63, 648, 794
HgaI GACGC 1 cut(s) 1294
HincII GTYRAC 1 cut(s) 622
HindII GTYRAC 1 cut(s) 622
HinfI GANTC 6 cut(s) 693, 770, 1032, 1220, 1247, 1380
HpaI GTTAAC 1 cut(s) 622
HpaII CCGG 3 cut(s) 63, 648, 794
HphI GGTGA 4 cut(s) 223, 550, 1118, 1414
Hpy166II GTNNAC 2 cut(s) 558, 622
Hpy188I TCNGA 8 cut(s) 96, 288, 816, 1009, 1048, 1056, 1219, 1411
Hpy188III TCNNGA 5 cut(s) 49, 539, 827, 833, 1244
Hpy8I GTNNAC 2 cut(s) 558, 622
HpyAV CCTTC 6 cut(s) 33, 278, 571, 602, 646, 1127
HpyCH4III ACNGT 3 cut(s) 100, 316, 1064
HpyCH4IV ACGT 2 cut(s) 913, 1506
HpyF10VI GCNNNNNNNGC 1 cut(s) 203
HpyF3I CTNAG 4 cut(s) 347, 486, 1053, 1461
HpySE526I ACGT 2 cut(s) 913, 1506
Ksp22I TGATCA 1 cut(s) 829
KspAI GTTAAC 1 cut(s) 622
LmnI GCTCC 7 cut(s) 73, 203, 734, 1026, 1092, 1105, 1165
Lsp1109I GCAGC 6 cut(s) 345, 791, 913, 1096, 1222, 1449
LweI GCATC 2 cut(s) 1390, 1502
MaeI CTAG 1 cut(s) 198
MaeII ACGT 2 cut(s) 913, 1506
MaeIII GTNAC 2 cut(s) 229, 1420
MboII GAAGA 6 cut(s) 81, 517, 848, 884, 896, 1027
MfeI CAATTG 1 cut(s) 819
MflI RGATCY 8 cut(s) 4, 174, 352, 513, 760, 873, 1352, 1446
MhlI GDGCHC 4 cut(s) 70, 277, 1170, 1363
MlyI GAGTC 2 cut(s) 702, 764
MmeI TCCRAC 5 cut(s) 82, 687, 709, 889, 1272
Mph1103I ATGCAT 1 cut(s) 1199
MroXI GAANNNNTTC 2 cut(s) 888, 1325
MseI TTAA 5 cut(s) 621, 723, 1095, 1269, 1503
MslI CAYNNNNRTG 2 cut(s) 327, 1158
MspA1I CMGCKG 1 cut(s) 782
MspI CCGG 3 cut(s) 63, 648, 794
MspR9I CCNGG 6 cut(s) 279, 578, 649, 794, 993, 1338
MunI CAATTG 1 cut(s) 819
Mva1269I GAATGC 1 cut(s) 1207
MvaI CCWGG 4 cut(s) 279, 578, 993, 1338
MwoI GCNNNNNNNGC 1 cut(s) 203
NciI CCSGG 2 cut(s) 649, 794
NlaIV GGNNCC 9 cut(s) 6, 17, 106, 176, 205, 354, 515, 1061, 1362
NmuCI GTSAC 2 cut(s) 229, 1420
NsiI ATGCAT 1 cut(s) 1199
NspI RCATGY 2 cut(s) 556, 1197
PagI TCATGA 2 cut(s) 832, 1243
PciI ACATGT 1 cut(s) 552
PctI GAATGC 1 cut(s) 1207
PdmI GAANNNNTTC 2 cut(s) 888, 1325
PfeI GAWTC 4 cut(s) 1032, 1220, 1247, 1380
PflFI GACNNNGTC 1 cut(s) 461
PflMI CCANNNNNTGG 1 cut(s) 142
PkrI GCNGC 6 cut(s) 335, 781, 903, 1086, 1237, 1439
PleI GAGTC 2 cut(s) 701, 764
PpsI GAGTC 2 cut(s) 701, 764
PscI ACATGT 1 cut(s) 552
PshAI GACNNNNGTC 1 cut(s) 293
Psp6I CCWGG 4 cut(s) 277, 576, 991, 1336
PspEI GGTNACC 1 cut(s) 229
PspGI CCWGG 4 cut(s) 277, 576, 991, 1336
PspN4I GGNNCC 9 cut(s) 6, 17, 106, 176, 205, 354, 515, 1061, 1362
PspPI GGNCC 5 cut(s) 51, 104, 113, 463, 1070
PstI CTGCAG 2 cut(s) 903, 1086
PsuI RGATCY 8 cut(s) 4, 174, 352, 513, 760, 873, 1352, 1446
PsyI GACNNNGTC 1 cut(s) 461
PvuII CAGCTG 1 cut(s) 782
RsaI GTAC 1 cut(s) 921
RsaNI GTAC 1 cut(s) 920
RseI CAYNNNNRTG 2 cut(s) 327, 1158
SaqAI TTAA 5 cut(s) 621, 723, 1095, 1269, 1503
SatI GCNGC 6 cut(s) 334, 780, 902, 1085, 1236, 1438
Sau96I GGNCC 5 cut(s) 51, 104, 113, 463, 1070
SchI GAGTC 2 cut(s) 702, 764
ScrFI CCNGG 6 cut(s) 279, 578, 649, 794, 993, 1338
SduI GDGCHC 4 cut(s) 70, 277, 1170, 1363
SfaNI GCATC 2 cut(s) 1390, 1502
SfcI CTRYAG 2 cut(s) 899, 1082
SinI GGWCC 4 cut(s) 51, 104, 113, 463
SmiMI CAYNNNNRTG 2 cut(s) 327, 1158
SmlI CTYRAG 1 cut(s) 125
SmoI CTYRAG 1 cut(s) 125
SsiI CCGC 1 cut(s) 19
SspMI CTAG 1 cut(s) 198
StyD4I CCNGG 6 cut(s) 277, 576, 647, 792, 991, 1336
StyI CCWWGG 1 cut(s) 756
TaaI ACNGT 3 cut(s) 100, 316, 1064
TaiI ACGT 2 cut(s) 916, 1509
TaqI TCGA 3 cut(s) 271, 1030, 1471
TfiI GAWTC 4 cut(s) 1032, 1220, 1247, 1380
Tru1I TTAA 5 cut(s) 621, 723, 1095, 1269, 1503
Tru9I TTAA 5 cut(s) 621, 723, 1095, 1269, 1503
TscAI CASTG 4 cut(s) 214, 319, 375, 1307
TseFI GTSAC 2 cut(s) 229, 1420
TseI GCWGC 6 cut(s) 333, 779, 901, 1084, 1235, 1437
Tsp45I GTSAC 2 cut(s) 229, 1420
TspGWI ACGGA 2 cut(s) 187, 425
TspRI CASTG 4 cut(s) 214, 319, 375, 1307
Tth111I GACNNNGTC 1 cut(s) 461
Van91I CCANNNNNTGG 1 cut(s) 142
VpaK11BI GGWCC 4 cut(s) 51, 104, 113, 463
XapI RAATTY 4 cut(s) 449, 668, 1144, 1431
XceI RCATGY 2 cut(s) 556, 1197
XmnI GAANNNNTTC 2 cut(s) 888, 1325
XspI CTAG 1 cut(s) 198
Zsp2I ATGCAT 1 cut(s) 1199
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.