Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0014054

Physical Location & Seq

Genomic Coordinates Reverse (-)

5539378 .. 5540748

Gene Structure 1371 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1041600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1371 bp

ATGGAGTCGAGCATCCTAGAGTCCATCGGCGTCGAGATCATCGGCGTCATGTCCCCAGTCTCGATCTGCATGCTTCTTGTTGTTCTCTTAGTCTACGCTCTCTCTCCCTCCAATCCCTTCTCCGCCTCCGCTCCTCCGATCCGCACCGCCGCCAACCTCGTCTACCTCGAGACCCCCACCGATTCCGCCGCCCAAAAGCTCGAAGGCGCCCTCCTCAACGCCCTGGTCTTCGTCGTCCTCATCGCCGTCGTCACCTTCCTCCTCGTCCTCCTCTACTACTACAACTTCACCAACTTCTTGAAGAACTACATGCGCTTCTCCGCCTTTTTCGTGCTGGGCACCATGGGAGGTTCGATTTTCTTGTCCATTGTCCAGCATTTCTCCATACCCATCGACTCCATTACTTGCTTTTTGCTGCTTTTCAATTTCACTGTTGTGGGCGTCTTGTCCGTCTTCTCCGGCGGTGTTCCCATTTTTCTACGCCAAGCTTATATGGTTTCTTTGGGGATTATTGTGGCGGCTTGGTTTACCAAGTTGCCCGAATGGACGACTTGGGTTTTGCTTGTGGCGCTGGCCGTCTATGATTTGGTGGCCGTGCTGGCACCGGGCGGCCCACTTAAGCTCTTGGTGGAGTTGGCCTCTAGCCGGGATGAAGAGCTCCCAGCTTTGATTTACGAGGCCCGCCCAACTGTGCCAAATTCTGGGCGTCGTGGGACCGGTTTGGAGCTTTTGGTTGCTGGGGTTTCGGATTCTGGGTCTGTGGAGCTTCAGGCAGTCCCCAGGGGCAATGGGAATCAAAATGAGAATGAAAATGGTGGTAATTCTGAGTATACCGCTGTTGATGTTGAGGTCGCGAACGAGGAAGGTGAGGGTAATAGAGATGAAGGGGAGAGATTACTATTGGAGGATAATTCATGGGGTAGGCCGTCGCCAAGTAGTGGTTCTTCAAGATATTCAAGTATGATTGTTCAGTCCGATAGAGCTACACAATATGGCAGTGGGGCTTCTGAAATTATTAGTGAGGAAATGTCTCCTCTTGTTGAAACGACAGTATTGGAGAATGAGAGAGAGCAATCGAGGAGGGAAGGTAGCGAAATGTTCAGTAAAGGTATTAAACTTGGTCTAGGGGATTTCGTTTTCTACAGTGTTCTTGTGGGCAGAGCTGCAATGTATGACCTTATGACTGTGTATGCCTGTTATCTTGCCATTATTTCGGGACTTGGGTGCACTCTTATTTTGTTGTCAGTGTACCATCGAGCTTTGCCGGCTCTGCCCATATCTATCATTTTGGGTGTTGTTTTTTACTTCTTGACTCGGTTATTAATGGAGCCTTTTGTTGTTGGGACAGCTACAAATTTGTTGATGTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005798 GO:0005886 GO:0005887 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0016020 GO:0016021 GO:0016787 GO:0019538 GO:0031224 GO:0031226 GO:0031410 GO:0031982 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0070011 GO:0071704 GO:0071944 GO:0097708 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04310 ko04330 ko04722 ko05010 ko05165 map04310 map04330 map04722 map05010 map05165

Pfam Domains

Protein Families

Presenilin

Protein Analysis

457

Amino Acids

49.46

Weight (kDa)

4.59

Isoelectric Point (pI)

40.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Presenilin	PF01080	10 - 446	2.7e-128	Presenilin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0014054)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08700
fragaria_vesca	FvH4_1g29640 FvH4_1g29640 FvH4_1g29640
malus_domestica	MD06G1041600.v1.1
prunus_persica	Prupe.5G048300_v2.0.a1
pyrus_communis	pycom06g03510
rosa_chinensis	RchiOBHm_Chr3g0495681
rosa_laevigata	RLG00000022596
rosa_multiflora	Rmu_sc0005747.1_g000009
rosa_roxburghii	Rroxscaffold_6G00390140
rosa_rugosa	Rorug03G0275600
rosa_samantha	Rh3AG322900 Rh3BG358400 Rh3CG355000 Rh3DG358300
rosa_wichuraiana	Rw3G028240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	206, 338, 601
AccB7I	CCANNNNNTGG	2 cut(s)	701, 938
AccBSI	CCGCTC	1 cut(s)	131
AccI	GTMKAC	3 cut(s)	93, 162, 830
AccII	CGCG	1 cut(s)	854
AclWI	GGATC	1 cut(s)	133
AcoI	YGGCCR	2 cut(s)	573, 591
AcsI	RAATTY	2 cut(s)	697, 1354
AcuI	CTGAAG	1 cut(s)	752
AcyI	GRCGYC	5 cut(s)	30, 45, 207, 441, 706
AfaI	GTAC	1 cut(s)	1250
AfiI	CCNNNNNNNGG	3 cut(s)	645, 701, 938
AflII	CTTAAG	1 cut(s)	617
AgeI	ACCGGT	1 cut(s)	716
AgsI	TTSAA	5 cut(s)	301, 424, 948, 957, 1043
AjnI	CCWGG	2 cut(s)	222, 779
AjuI	GAANNNNNNNTTGG	2 cut(s)	925, 957
AleI	CACNNNNGTG	1 cut(s)	434
Alw21I	GWGCWC	2 cut(s)	660, 1229
Alw26I	GTCTC	3 cut(s)	64, 164, 1035
Alw44I	GTGCAC	1 cut(s)	1225
AlwI	GGATC	1 cut(s)	133
Ama87I	CYCGRG	1 cut(s)	167
AoxI	GGCC	6 cut(s)	573, 591, 610, 636, 678, 923
ApaLI	GTGCAC	1 cut(s)	1225
ApeKI	GCWGC	2 cut(s)	415, 1163
ApoI	RAATTY	2 cut(s)	697, 1354
ArsI	GACNNNNNNTTYG	2 cut(s)	541, 573
AseI	ATTAAT	1 cut(s)	1322
AsiGI	ACCGGT	1 cut(s)	716
AspLEI	GCGC	3 cut(s)	209, 315, 571
AspS9I	GGNCC	3 cut(s)	611, 679, 714
AsuC2I	CCSGG	2 cut(s)	606, 647
AsuHPI	GGTGA	3 cut(s)	244, 280, 878
AvaI	CYCGRG	1 cut(s)	167
AvaII	GGWCC	1 cut(s)	714
BaeGI	GKGCMC	2 cut(s)	341, 1229
BanI	GGYRCC	3 cut(s)	206, 338, 601
BanII	GRGCYC	1 cut(s)	660
BarI	GAAGNNNNNNTAC	2 cut(s)	928, 960
BbsI	GAAGAC	2 cut(s)	220, 445
Bbv12I	GWGCWC	2 cut(s)	660, 1229
BbvI	GCAGC	2 cut(s)	402, 1150
BccI	CCATC	3 cut(s)	32, 398, 1260
BceAI	ACGGC	4 cut(s)	230, 560, 578, 910
BcgI	CGANNNNNNTGC	2 cut(s)	52, 86
BciT130I	CCWGG	2 cut(s)	224, 781
BcnI	CCSGG	2 cut(s)	606, 647
BcoDI	GTCTC	3 cut(s)	64, 164, 1035
BfaI	CTAG	3 cut(s)	17, 642, 1124
BfmI	CTRYAG	1 cut(s)	1141
BfoI	RGCGCY	2 cut(s)	210, 572
BfrI	CTTAAG	1 cut(s)	617
BglI	GCCNNNNNGGC	1 cut(s)	599
BisI	GCNGC	6 cut(s)	150, 189, 416, 519, 610, 1164
BlsI	GCNGC	6 cut(s)	151, 190, 417, 520, 611, 1165
Bme1390I	CCNGG	4 cut(s)	224, 606, 647, 781
Bme18I	GGWCC	1 cut(s)	714
BmeT110I	CYCGRG	1 cut(s)	167
BmgT120I	GGNCC	3 cut(s)	611, 679, 714
BmiI	GGNNCC	5 cut(s)	208, 340, 603, 715, 1329
BmrFI	CCNGG	4 cut(s)	224, 606, 647, 781
BmrI	ACTGGG	1 cut(s)	50
BmsI	GCATC	1 cut(s)	21
BmuI	ACTGGG	1 cut(s)	50
BpiI	GAAGAC	2 cut(s)	220, 445
BplI	GAGNNNNNCTC	2 cut(s)	623, 655
BpuMI	CCSGG	2 cut(s)	606, 647
BsaHI	GRCGYC	5 cut(s)	30, 45, 207, 441, 706
BsaI	GGTCTC	1 cut(s)	164
BsaJI	CCNNGG	4 cut(s)	222, 342, 779, 780
BsaWI	WCCGGW	1 cut(s)	716
BsaXI	ACNNNNNCTCC	2 cut(s)	1072, 1102
Bsc4I	CCNNNNNNNGG	3 cut(s)	645, 701, 938
Bse118I	RCCGGY	2 cut(s)	716, 1264
Bse1I	ACTGG	1 cut(s)	56
Bse3DI	GCAATG	2 cut(s)	793, 1173
BseBI	CCWGG	2 cut(s)	224, 781
BseDI	CCNNGG	4 cut(s)	222, 342, 779, 780
BseGI	GGATG	2 cut(s)	12, 655
BseLI	CCNNNNNNNGG	3 cut(s)	645, 701, 938
BseMI	GCAATG	2 cut(s)	793, 1173
BseMII	CTCAG	1 cut(s)	816
BseNI	ACTGG	1 cut(s)	56
BseRI	GAGGAG	6 cut(s)	123, 203, 251, 260, 1023, 1093
BseSI	GKGCMC	2 cut(s)	341, 1229
BseXI	GCAGC	2 cut(s)	402, 1150
BseYI	CCCAGC	3 cut(s)	334, 661, 737
Bsh1236I	CGCG	1 cut(s)	854
BshFI	GGCC	6 cut(s)	575, 593, 612, 638, 680, 925
BshNI	GGYRCC	3 cut(s)	206, 338, 601
BshTI	ACCGGT	1 cut(s)	716
BsiHKAI	GWGCWC	2 cut(s)	660, 1229
BsiHKCI	CYCGRG	1 cut(s)	167
BsiSI	CCGG	5 cut(s)	459, 605, 646, 717, 1265
BslFI	GGGAC	5 cut(s)	37, 727, 761, 1230, 1357
BslI	CCNNNNNNNGG	3 cut(s)	645, 701, 938
BsmAI	GTCTC	3 cut(s)	64, 164, 1035
BsmFI	GGGAC	5 cut(s)	37, 727, 761, 1230, 1357
BsnI	GGCC	6 cut(s)	575, 593, 612, 638, 680, 925
Bso31I	GGTCTC	1 cut(s)	164
BsoBI	CYCGRG	1 cut(s)	167
Bsp1286I	GDGCHC	3 cut(s)	341, 660, 1229
Bsp143I	GATC	3 cut(s)	36, 63, 138
Bsp19I	CCATGG	1 cut(s)	342
Bsp68I	TCGCGA	1 cut(s)	854
BspANI	GGCC	6 cut(s)	575, 593, 612, 638, 680, 925
BspCNI	CTCAG	1 cut(s)	817
BspFNI	CGCG	1 cut(s)	854
BspLI	GGNNCC	5 cut(s)	208, 340, 603, 715, 1329
BspPI	GGATC	1 cut(s)	133
BspQI	GCTCTTC	1 cut(s)	648
BspT107I	GGYRCC	3 cut(s)	206, 338, 601
BspTI	CTTAAG	1 cut(s)	617
BspTNI	GGTCTC	1 cut(s)	164
BsrBI	CCGCTC	1 cut(s)	131
BsrDI	GCAATG	2 cut(s)	793, 1173
BsrFI	RCCGGY	2 cut(s)	716, 1264
BsrI	ACTGG	1 cut(s)	56
BssAI	RCCGGY	2 cut(s)	716, 1264
BssECI	CCNNGG	4 cut(s)	222, 342, 779, 780
BssMI	GATC	3 cut(s)	36, 63, 138
BssNAI	GTATAC	1 cut(s)	831
BssNI	GRCGYC	5 cut(s)	30, 45, 207, 441, 706
BssT1I	CCWWGG	1 cut(s)	342
Bst1107I	GTATAC	1 cut(s)	831
Bst2UI	CCWGG	2 cut(s)	224, 781
Bst4CI	ACNGT	5 cut(s)	433, 691, 1051, 1145, 1186
Bst6I	CTCTTC	1 cut(s)	648
BstACI	GRCGYC	5 cut(s)	30, 45, 207, 441, 706
BstAFI	CTTAAG	1 cut(s)	617
BstC8I	GCNNGC	5 cut(s)	71, 573, 600, 682, 1266
BstDEI	CTNAG	2 cut(s)	88, 825
BstDSI	CCRYGG	1 cut(s)	342
BstF5I	GGATG	2 cut(s)	12, 655
BstFNI	CGCG	1 cut(s)	854
BstH2I	RGCGCY	2 cut(s)	210, 572
BstHHI	GCGC	3 cut(s)	209, 315, 571
BstKTI	GATC	3 cut(s)	39, 66, 141
BstMAI	GTCTC	3 cut(s)	64, 164, 1035
BstMBI	GATC	3 cut(s)	36, 63, 138
BstMWI	GCNNNNNNNGC	4 cut(s)	568, 599, 1265, 1270
BstNI	CCWGG	2 cut(s)	224, 781
BstNSI	RCATGY	2 cut(s)	73, 313
BstSCI	CCNGG	4 cut(s)	222, 604, 645, 779
BstSFI	CTRYAG	1 cut(s)	1141
BstSLI	GKGCMC	2 cut(s)	341, 1229
BstUI	CGCG	1 cut(s)	854
BstV1I	GCAGC	2 cut(s)	402, 1150
BstV2I	GAAGAC	2 cut(s)	220, 445
BstZ17I	GTATAC	1 cut(s)	831
BsuRI	GGCC	6 cut(s)	575, 593, 612, 638, 680, 925
BtgI	CCRYGG	1 cut(s)	342
BtgZI	GCGATG	1 cut(s)	226
BtsCI	GGATG	2 cut(s)	12, 655
BtsI	GCAGTG	1 cut(s)	1003
BtsIMutI	CAGTG	4 cut(s)	429, 1003, 1150, 1251
BtuMI	TCGCGA	1 cut(s)	854
Cac8I	GCNNGC	5 cut(s)	71, 573, 600, 682, 1266
CfoI	GCGC	3 cut(s)	209, 315, 571
Cfr10I	RCCGGY	2 cut(s)	716, 1264
Cfr13I	GGNCC	3 cut(s)	611, 679, 714
CseI	GACGC	4 cut(s)	19, 34, 430, 695
Csp6I	GTAC	1 cut(s)	1249
CspAI	ACCGGT	1 cut(s)	716
CviAII	CATG	5 cut(s)	49, 70, 310, 343, 915
CviQI	GTAC	1 cut(s)	1249
DdeI	CTNAG	2 cut(s)	88, 825
DinI	GGCGCC	1 cut(s)	208
DpnI	GATC	3 cut(s)	38, 65, 140
DpnII	GATC	3 cut(s)	36, 63, 138
EaeI	YGGCCR	2 cut(s)	573, 591
Eam1104I	CTCTTC	1 cut(s)	648
EarI	CTCTTC	1 cut(s)	648
EciI	GGCGGA	3 cut(s)	112, 175, 310
Ecl136II	GAGCTC	1 cut(s)	658
Eco130I	CCWWGG	1 cut(s)	342
Eco24I	GRGCYC	1 cut(s)	660
Eco31I	GGTCTC	1 cut(s)	164
Eco47I	GGWCC	1 cut(s)	714
Eco53kI	GAGCTC	1 cut(s)	658
Eco57I	CTGAAG	1 cut(s)	752
Eco88I	CYCGRG	1 cut(s)	167
EcoICRI	GAGCTC	1 cut(s)	658
EcoRII	CCWGG	2 cut(s)	222, 779
EcoT14I	CCWWGG	1 cut(s)	342
EcoT38I	GRGCYC	1 cut(s)	660
EgeI	GGCGCC	1 cut(s)	208
EheI	GGCGCC	1 cut(s)	208
ErhI	CCWWGG	1 cut(s)	342
FaeI	CATG	5 cut(s)	52, 73, 313, 346, 918
FaqI	GGGAC	5 cut(s)	37, 727, 761, 1230, 1357
FatI	CATG	5 cut(s)	48, 69, 309, 342, 914
FauI	CCCGC	1 cut(s)	689
FblI	GTMKAC	3 cut(s)	93, 162, 830
Fnu4HI	GCNGC	6 cut(s)	150, 189, 416, 519, 610, 1164
FokI	GGATG	1 cut(s)	662
FriOI	GRGCYC	1 cut(s)	660
Fsp4HI	GCNGC	6 cut(s)	150, 189, 416, 519, 610, 1164
FspBI	CTAG	3 cut(s)	17, 642, 1124
GlaI	GCGC	3 cut(s)	208, 314, 570
GluI	GCNGC	6 cut(s)	150, 189, 416, 519, 610, 1164
GsaI	CCCAGC	3 cut(s)	338, 665, 741
HaeII	RGCGCY	2 cut(s)	210, 572
HaeIII	GGCC	6 cut(s)	575, 593, 612, 638, 680, 925
HapII	CCGG	5 cut(s)	459, 605, 646, 717, 1265
HgaI	GACGC	4 cut(s)	19, 34, 430, 695
HhaI	GCGC	3 cut(s)	209, 315, 571
Hin1I	GRCGYC	5 cut(s)	30, 45, 207, 441, 706
Hin1II	CATG	5 cut(s)	52, 73, 313, 346, 918
Hin6I	GCGC	3 cut(s)	207, 313, 569
HinP1I	GCGC	3 cut(s)	207, 313, 569
HindIII	AAGCTT	1 cut(s)	486
HinfI	GANTC	7 cut(s)	5, 20, 182, 395, 749, 793, 1312
HpaII	CCGG	5 cut(s)	459, 605, 646, 717, 1265
HphI	GGTGA	3 cut(s)	244, 280, 878
Hpy166II	GTNNAC	6 cut(s)	94, 163, 528, 831, 1227, 1249
Hpy188I	TCNGA	5 cut(s)	138, 748, 826, 976, 1009
Hpy188III	TCNNGA	8 cut(s)	34, 61, 169, 298, 853, 948, 1215, 1309
Hpy8I	GTNNAC	6 cut(s)	94, 163, 528, 831, 1227, 1249
Hpy99I	CGWCG	5 cut(s)	35, 236, 251, 711, 931
HpyAV	CCTTC	6 cut(s)	127, 197, 265, 857, 878, 1079
HpyCH4III	ACNGT	5 cut(s)	433, 691, 1051, 1145, 1186
HpyCH4V	TGCA	3 cut(s)	69, 1166, 1227
HpyF10VI	GCNNNNNNNGC	4 cut(s)	568, 599, 1265, 1270
HpyF3I	CTNAG	2 cut(s)	88, 825
Hsp92I	GRCGYC	5 cut(s)	30, 45, 207, 441, 706
Hsp92II	CATG	5 cut(s)	52, 73, 313, 346, 918
HspAI	GCGC	3 cut(s)	207, 313, 569
KasI	GGCGCC	1 cut(s)	206
KroI	GCCGGC	1 cut(s)	1264
KroNI	GCCGGC	1 cut(s)	1266
Kzo9I	GATC	3 cut(s)	36, 63, 138
LguI	GCTCTTC	1 cut(s)	648
LmnI	GCTCC	5 cut(s)	136, 663, 724, 763, 1327
Lsp1109I	GCAGC	2 cut(s)	402, 1150
LweI	GCATC	1 cut(s)	21
MaeI	CTAG	3 cut(s)	17, 642, 1124
MaeIII	GTNAC	1 cut(s)	250
MalI	GATC	3 cut(s)	38, 65, 140
MbiI	CCGCTC	1 cut(s)	131
MboI	GATC	3 cut(s)	36, 63, 138
MboII	GAAGA	5 cut(s)	220, 313, 445, 665, 936
MhlI	GDGCHC	3 cut(s)	341, 660, 1229
MluCI	AATT	6 cut(s)	424, 697, 820, 910, 1011, 1354
Mly113I	GGCGCC	1 cut(s)	207
MlyI	GAGTC	4 cut(s)	14, 29, 389, 1306
MroNI	GCCGGC	1 cut(s)	1264
MseI	TTAA	3 cut(s)	618, 1113, 1322
MslI	CAYNNNNRTG	1 cut(s)	434
MspA1I	CMGCKG	1 cut(s)	836
MspCI	CTTAAG	1 cut(s)	617
MspI	CCGG	5 cut(s)	459, 605, 646, 717, 1265
MspR9I	CCNGG	4 cut(s)	224, 606, 647, 781
MvaI	CCWGG	2 cut(s)	224, 781
MvnI	CGCG	1 cut(s)	854
MwoI	GCNNNNNNNGC	4 cut(s)	568, 599, 1265, 1270
NaeI	GCCGGC	1 cut(s)	1266
NarI	GGCGCC	1 cut(s)	207
NciI	CCSGG	2 cut(s)	606, 647
NcoI	CCATGG	1 cut(s)	342
NdeII	GATC	3 cut(s)	36, 63, 138
NgoMIV	GCCGGC	1 cut(s)	1264
NlaIII	CATG	5 cut(s)	52, 73, 313, 346, 918
NlaIV	GGNNCC	5 cut(s)	208, 340, 603, 715, 1329
NmuCI	GTSAC	1 cut(s)	250
NruI	TCGCGA	1 cut(s)	854
NspI	RCATGY	2 cut(s)	73, 313
OliI	CACNNNNGTG	1 cut(s)	434
PaeI	GCATGC	1 cut(s)	73
PaeR7I	CTCGAG	1 cut(s)	167
PasI	CCCWGGG	1 cut(s)	780
PciSI	GCTCTTC	1 cut(s)	648
PcsI	WCGNNNNNNNCGW	1 cut(s)	165
PdiI	GCCGGC	1 cut(s)	1266
PfeI	GAWTC	3 cut(s)	182, 749, 793
PflMI	CCANNNNNTGG	2 cut(s)	701, 938
PinAI	ACCGGT	1 cut(s)	716
PkrI	GCNGC	6 cut(s)	151, 190, 417, 520, 611, 1165
PleI	GAGTC	4 cut(s)	13, 28, 389, 1306
PluTI	GGCGCC	1 cut(s)	210
PpsI	GAGTC	4 cut(s)	13, 28, 389, 1306
PshBI	ATTAAT	1 cut(s)	1322
Psp124BI	GAGCTC	1 cut(s)	660
Psp6I	CCWGG	2 cut(s)	222, 779
PspFI	CCCAGC	3 cut(s)	334, 661, 737
PspGI	CCWGG	2 cut(s)	222, 779
PspN4I	GGNNCC	5 cut(s)	208, 340, 603, 715, 1329
PspPI	GGNCC	3 cut(s)	611, 679, 714
RruI	TCGCGA	1 cut(s)	854
RsaI	GTAC	1 cut(s)	1250
RsaNI	GTAC	1 cut(s)	1249
RseI	CAYNNNNRTG	1 cut(s)	434
SacI	GAGCTC	1 cut(s)	660
SapI	GCTCTTC	1 cut(s)	648
SaqAI	TTAA	3 cut(s)	618, 1113, 1322
SatI	GCNGC	6 cut(s)	150, 189, 416, 519, 610, 1164
Sau3AI	GATC	3 cut(s)	36, 63, 138
Sau96I	GGNCC	3 cut(s)	611, 679, 714
SchI	GAGTC	4 cut(s)	14, 29, 389, 1306
ScrFI	CCNGG	4 cut(s)	224, 606, 647, 781
SduI	GDGCHC	3 cut(s)	341, 660, 1229
SfaNI	GCATC	1 cut(s)	21
SfcI	CTRYAG	1 cut(s)	1141
SfoI	GGCGCC	1 cut(s)	208
Sfr274I	CTCGAG	1 cut(s)	167
SinI	GGWCC	1 cut(s)	714
SlaI	CTCGAG	1 cut(s)	167
SmiMI	CAYNNNNRTG	1 cut(s)	434
SmlI	CTYRAG	2 cut(s)	167, 617
SmoI	CTYRAG	2 cut(s)	167, 617
SphI	GCATGC	1 cut(s)	73
Sse9I	AATT	6 cut(s)	424, 697, 820, 910, 1011, 1354
SspDI	GGCGCC	1 cut(s)	206
SspMI	CTAG	3 cut(s)	17, 642, 1124
SstI	GAGCTC	1 cut(s)	660
StyD4I	CCNGG	4 cut(s)	222, 604, 645, 779
StyI	CCWWGG	1 cut(s)	342
TaaI	ACNGT	5 cut(s)	433, 691, 1051, 1145, 1186
TaqI	TCGA	9 cut(s)	8, 33, 62, 168, 201, 353, 393, 1076, 1255
TasI	AATT	6 cut(s)	424, 697, 820, 910, 1011, 1354
TauI	GCSGC	4 cut(s)	152, 191, 521, 612
TfiI	GAWTC	3 cut(s)	182, 749, 793
Tru1I	TTAA	3 cut(s)	618, 1113, 1322
Tru9I	TTAA	3 cut(s)	618, 1113, 1322
TscAI	CASTG	4 cut(s)	436, 1003, 1150, 1251
TseFI	GTSAC	1 cut(s)	250
TseI	GCWGC	2 cut(s)	415, 1163
Tsp45I	GTSAC	1 cut(s)	250
TspDTI	ATGAA	4 cut(s)	666, 822, 897, 903
TspGWI	ACGGA	1 cut(s)	439
TspRI	CASTG	4 cut(s)	436, 1003, 1150, 1251
Van91I	CCANNNNNTGG	2 cut(s)	701, 938
Vha464I	CTTAAG	1 cut(s)	617
VneI	GTGCAC	1 cut(s)	1225
VpaK11BI	GGWCC	1 cut(s)	714
VspI	ATTAAT	1 cut(s)	1322
XapI	RAATTY	2 cut(s)	697, 1354
XceI	RCATGY	2 cut(s)	73, 313
XhoI	CTCGAG	1 cut(s)	167
XmiI	GTMKAC	3 cut(s)	93, 162, 830
XspI	CTAG	3 cut(s)	17, 642, 1124

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.