Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0014054

Physical Location & Seq

Genomic Coordinates Forward (+)

43856038 .. 43879806

Gene Structure 23769 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG358300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1239 bp

ATGGAGTCGAGCATCCTGGAGTCGATCGGCGTTGAAATCATCGGCGTAATGTCGCCAGTGTCTATCTGCATGTTCCTTGTCGTCCTTTTGGTCTACGCCCTCTCCCCCTCGAACCCTTCGTCGTCGTCGTCGATCCGGACCGCCGCAAACCTGGTGTACCTGGAGAGCCCCACCGACTCGACCTCCGAAAAGCTCGAAGGCGCTCTCCTCAACGCCCTCGTCTTCGTTATTCTCATCGCCCTCGTCACCTTCCTCCTCGTGCTCCTCTACTACTACAAGTTCACTAATTTCTTGAAGAACTACATGCGCTTCTCCGCCTTCTTCGTCCTCGCCACCATGGGAGGTTCCATCTTCCTCTCCATTATCCAGCATTTCTCCATACCCATCGACTCCATCACTTGCTTTCTGCTGCTCTTCAATTTCACTCTTGTCGGCGTCTTGTCCATGTTCGCCGCCGGCATGCCTATTCTCTTGCGCCAAGCTTATATGGTCTGCTTGGGCATTATCGTCGCTGCTTGGTTCACCAAATTGCCCGAATGGACCACTTGGGTTCTGCTTGTCGCTCTCGCTCTCTACGATTTGGTAGCTGTTCTCGCCCCCGGCGGCCCCCTTAAACTCCTCGTTGAGTTGGCCTCCACCCGCGACGAGGAGCTCCCCGCTTTGGTTTATGAGGCTCGCCCCACCGTCCCCCGAAACGCAAATGCATCCTCCTTGGGCCTTTTGGTTGCCGGGGTTTCCGATTCTGGCTCCGTTGAGCTCCAGGCTGTTTCGAGGGACAATGTCAGTCCAGGTGAGAATGAAAACCGTGCTAGTTCAGACGACAGTGTGATTGAGGTTGACAGTTTCGCCAAGGAGGGAGGTCAAAGTAACGGAGACGAAGGGCAGAGGTTGCTGCCGGTGGATAGGGCACTGGGTAGGCACTCGTCAAGCAGTGATACTTCGGAGTTTTCAACTGTCAATGTTCCCTCTGATAGAGCTAGGCAGTTTGGCAGTGTAGCATCTGAAATTGTTGCCGATGAGGAGGAGATGTCTCCTCTTGTTCAAATGTCTGCATCAGGTAACGAGAGAGACGAGTTGAGAAGGGATGCTGCTGAAATGTTCAGTAGAGAGGTGCATTATGCTAAGAGCAGGACTGATGATTTTGTAGGCATGAGATCTATATACAAAGTAAAAGCTGTGTTTGCAAAGTTCATGCATTCTTGTTACCTATGGATGAAGTTTTTTCCTTTTGGAGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005798 GO:0005886 GO:0005887 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0016020 GO:0016021 GO:0016787 GO:0019538 GO:0031224 GO:0031226 GO:0031410 GO:0031982 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0070011 GO:0071704 GO:0071944 GO:0097708 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04310 ko04330 ko04722 ko05010 ko05165 map04310 map04330 map04722 map05010 map05165

Pfam Domains

Protein Families

Presenilin

Protein Analysis

412

Amino Acids

45.12

Weight (kDa)

4.81

Isoelectric Point (pI)

52.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Presenilin	PF01080	10 - 302	4.4e-81	Presenilin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0014054)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08700
fragaria_vesca	FvH4_1g29640 FvH4_1g29640 FvH4_1g29640
malus_domestica	MD06G1041600.v1.1
prunus_persica	Prupe.5G048300_v2.0.a1
pyrus_communis	pycom06g03510
rosa_chinensis	RchiOBHm_Chr3g0495681
rosa_laevigata	RLG00000022596
rosa_multiflora	Rmu_sc0005747.1_g000009
rosa_roxburghii	Rroxscaffold_6G00390140
rosa_rugosa	Rorug03G0275600
rosa_samantha	Rh3AG322900 Rh3BG358400 Rh3CG355000 Rh3DG358300
rosa_wichuraiana	Rw3G028240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	93
AccII	CGCG	1 cut(s)	642
AccIII	TCCGGA	1 cut(s)	135
AciI	CCGC	7 cut(s)	141, 144, 315, 453, 603, 640, 657
AclWI	GGATC	1 cut(s)	127
AcyI	GRCGYC	1 cut(s)	435
AfaI	GTAC	1 cut(s)	158
AfiI	CCNNNNNNNGG	2 cut(s)	646, 661
AgsI	TTSAA	5 cut(s)	35, 295, 418, 951, 1043
AjnI	CCWGG	5 cut(s)	15, 150, 159, 759, 787
AluBI	AGCT	7 cut(s)	193, 482, 587, 652, 757, 977, 1175
AluI	AGCT	7 cut(s)	193, 482, 587, 652, 757, 977, 1175
Alw21I	GWGCWC	3 cut(s)	264, 654, 759
Alw26I	GTCTC	3 cut(s)	867, 1035, 1062
AlwI	GGATC	1 cut(s)	127
Aor13HI	TCCGGA	1 cut(s)	135
AoxI	GGCC	3 cut(s)	604, 630, 715
ApeKI	GCWGC	4 cut(s)	409, 512, 892, 1088
ArsI	GACNNNNNNTTYG	2 cut(s)	104, 136
AspLEI	GCGC	3 cut(s)	203, 309, 477
AspS9I	GGNCC	4 cut(s)	138, 540, 605, 715
AsuC2I	CCSGG	2 cut(s)	600, 730
AsuHPI	GGTGA	3 cut(s)	238, 514, 803
AvaII	GGWCC	2 cut(s)	138, 540
BaeGI	GKGCMC	1 cut(s)	910
BanII	GRGCYC	3 cut(s)	170, 654, 759
BauI	CACGAG	1 cut(s)	257
BbsI	GAAGAC	1 cut(s)	214
Bbv12I	GWGCWC	3 cut(s)	264, 654, 759
BbvI	GCAGC	4 cut(s)	396, 499, 879, 1075
BccI	CCATC	3 cut(s)	356, 392, 401
BcgI	CGANNNNNNTGC	2 cut(s)	490, 524
BciT130I	CCWGG	5 cut(s)	17, 152, 161, 761, 789
BcnI	CCSGG	2 cut(s)	600, 730
BcoDI	GTCTC	3 cut(s)	867, 1035, 1062
BfaI	CTAG	2 cut(s)	810, 978
BfoI	RGCGCY	1 cut(s)	204
BglII	AGATCT	1 cut(s)	1154
BisI	GCNGC	7 cut(s)	144, 410, 453, 513, 604, 893, 1089
BlsI	GCNGC	7 cut(s)	145, 411, 454, 514, 605, 894, 1090
Bme1390I	CCNGG	7 cut(s)	17, 152, 161, 600, 730, 761, 789
Bme18I	GGWCC	2 cut(s)	138, 540
BmgT120I	GGNCC	4 cut(s)	138, 540, 605, 715
BmiI	GGNNCC	3 cut(s)	346, 607, 748
BmrFI	CCNGG	7 cut(s)	17, 152, 161, 600, 730, 761, 789
BmrI	ACTGGG	1 cut(s)	920
BmsI	GCATC	5 cut(s)	21, 713, 1007, 1061, 1075
BmuI	ACTGGG	1 cut(s)	920
BpiI	GAAGAC	1 cut(s)	214
BplI	GAGNNNNNCTC	2 cut(s)	617, 649
BpmI	CTGGAG	3 cut(s)	38, 182, 743
BpuMI	CCSGG	2 cut(s)	600, 730
BsaHI	GRCGYC	1 cut(s)	435
BsaJI	CCNNGG	5 cut(s)	336, 598, 711, 729, 849
BsaWI	WCCGGW	1 cut(s)	135
BsaXI	ACNNNNNCTCC	6 cut(s)	86, 116, 167, 197, 1013, 1043
Bsc4I	CCNNNNNNNGG	2 cut(s)	646, 661
Bse118I	RCCGGY	2 cut(s)	455, 895
Bse1I	ACTGG	2 cut(s)	56, 915
BseAI	TCCGGA	1 cut(s)	135
BseBI	CCWGG	5 cut(s)	17, 152, 161, 761, 789
BseDI	CCNNGG	5 cut(s)	336, 598, 711, 729, 849
BseGI	GGATG	4 cut(s)	12, 704, 1090, 1218
BseLI	CCNNNNNNNGG	2 cut(s)	646, 661
BseNI	ACTGG	2 cut(s)	56, 915
BseRI	GAGGAG	8 cut(s)	197, 245, 254, 608, 662, 1023, 1034, 1037
BseSI	GKGCMC	1 cut(s)	910
BseXI	GCAGC	4 cut(s)	396, 499, 879, 1075
Bsh1236I	CGCG	1 cut(s)	642
Bsh1285I	CGRYCG	1 cut(s)	27
BshFI	GGCC	3 cut(s)	606, 632, 717
BsiEI	CGRYCG	1 cut(s)	27
BsiHKAI	GWGCWC	3 cut(s)	264, 654, 759
BsiSI	CCGG	5 cut(s)	136, 456, 600, 729, 896
BslFI	GGGAC	2 cut(s)	671, 788
BslI	CCNNNNNNNGG	2 cut(s)	646, 661
BsmAI	GTCTC	3 cut(s)	867, 1035, 1062
BsmBI	CGTCTC	2 cut(s)	867, 1062
BsmFI	GGGAC	2 cut(s)	671, 788
BsmI	GAATGC	1 cut(s)	1195
BsnI	GGCC	3 cut(s)	606, 632, 717
Bsp1286I	GDGCHC	5 cut(s)	170, 264, 654, 759, 910
Bsp13I	TCCGGA	1 cut(s)	135
Bsp143I	GATC	3 cut(s)	24, 132, 1154
Bsp19I	CCATGG	1 cut(s)	336
BspACI	CCGC	7 cut(s)	141, 144, 315, 453, 603, 640, 657
BspANI	GGCC	3 cut(s)	606, 632, 717
BspEI	TCCGGA	1 cut(s)	135
BspFNI	CGCG	1 cut(s)	642
BspLI	GGNNCC	3 cut(s)	346, 607, 748
BspPI	GGATC	1 cut(s)	127
BspQI	GCTCTTC	1 cut(s)	419
BsrFI	RCCGGY	2 cut(s)	455, 895
BsrI	ACTGG	2 cut(s)	56, 915
BssAI	RCCGGY	2 cut(s)	455, 895
BssECI	CCNNGG	5 cut(s)	336, 598, 711, 729, 849
BssMI	GATC	3 cut(s)	24, 132, 1154
BssNI	GRCGYC	1 cut(s)	435
BssSI	CACGAG	1 cut(s)	257
BssT1I	CCWWGG	3 cut(s)	336, 711, 849
Bst2BI	CACGAG	1 cut(s)	257
Bst2UI	CCWGG	5 cut(s)	17, 152, 161, 761, 789
Bst4CI	ACNGT	5 cut(s)	685, 806, 824, 842, 955
Bst6I	CTCTTC	1 cut(s)	419
BstACI	GRCGYC	1 cut(s)	435
BstAPI	GCANNNNNTGC	1 cut(s)	889
BstC8I	GCNNGC	3 cut(s)	457, 461, 676
BstDEI	CTNAG	1 cut(s)	1122
BstDSI	CCRYGG	1 cut(s)	336
BstF5I	GGATG	4 cut(s)	12, 704, 1090, 1218
BstFNI	CGCG	1 cut(s)	642
BstH2I	RGCGCY	1 cut(s)	204
BstHHI	GCGC	3 cut(s)	203, 309, 477
BstKTI	GATC	3 cut(s)	27, 135, 1157
BstMAI	GTCTC	3 cut(s)	867, 1035, 1062
BstMBI	GATC	3 cut(s)	24, 132, 1154
BstMCI	CGRYCG	1 cut(s)	27
BstMWI	GCNNNNNNNGC	3 cut(s)	593, 889, 1181
BstNI	CCWGG	5 cut(s)	17, 152, 161, 761, 789
BstNSI	RCATGY	3 cut(s)	73, 307, 463
BstSCI	CCNGG	7 cut(s)	15, 150, 159, 598, 728, 759, 787
BstSLI	GKGCMC	1 cut(s)	910
BstUI	CGCG	1 cut(s)	642
BstV1I	GCAGC	4 cut(s)	396, 499, 879, 1075
BstV2I	GAAGAC	1 cut(s)	214
BstX2I	RGATCY	1 cut(s)	1154
BstYI	RGATCY	1 cut(s)	1154
BsuRI	GGCC	3 cut(s)	606, 632, 717
BtgI	CCRYGG	1 cut(s)	336
BtgZI	GCGATG	1 cut(s)	220
BtsCI	GGATG	4 cut(s)	12, 704, 1090, 1218
BtsI	GCAGTG	2 cut(s)	937, 997
BtsIMutI	CAGTG	5 cut(s)	63, 829, 908, 937, 997
Cac8I	GCNNGC	3 cut(s)	457, 461, 676
CfoI	GCGC	3 cut(s)	203, 309, 477
Cfr10I	RCCGGY	2 cut(s)	455, 895
Cfr13I	GGNCC	4 cut(s)	138, 540, 605, 715
CpoI	CGGWCCG	1 cut(s)	138
CseI	GACGC	1 cut(s)	424
CsiI	ACCWGGT	1 cut(s)	150
Csp6I	GTAC	1 cut(s)	157
CspI	CGGWCCG	1 cut(s)	138
CviAII	CATG	7 cut(s)	70, 304, 337, 445, 460, 1150, 1192
CviQI	GTAC	1 cut(s)	157
DdeI	CTNAG	1 cut(s)	1122
DpnI	GATC	3 cut(s)	26, 134, 1156
DpnII	GATC	3 cut(s)	24, 132, 1154
Eam1104I	CTCTTC	1 cut(s)	419
EarI	CTCTTC	1 cut(s)	419
EciI	GGCGGA	1 cut(s)	304
Ecl136II	GAGCTC	2 cut(s)	652, 757
Eco130I	CCWWGG	3 cut(s)	336, 711, 849
Eco24I	GRGCYC	3 cut(s)	170, 654, 759
Eco47I	GGWCC	2 cut(s)	138, 540
Eco53kI	GAGCTC	2 cut(s)	652, 757
EcoICRI	GAGCTC	2 cut(s)	652, 757
EcoRII	CCWGG	5 cut(s)	15, 150, 159, 759, 787
EcoT14I	CCWWGG	3 cut(s)	336, 711, 849
EcoT22I	ATGCAT	2 cut(s)	706, 1197
EcoT38I	GRGCYC	3 cut(s)	170, 654, 759
ErhI	CCWWGG	3 cut(s)	336, 711, 849
Esp3I	CGTCTC	2 cut(s)	867, 1062
FaeI	CATG	7 cut(s)	73, 307, 340, 448, 463, 1153, 1195
FaqI	GGGAC	2 cut(s)	671, 788
FatI	CATG	7 cut(s)	69, 303, 336, 444, 459, 1149, 1191
FauI	CCCGC	2 cut(s)	647, 664
FblI	GTMKAC	1 cut(s)	93
Fnu4HI	GCNGC	7 cut(s)	144, 410, 453, 513, 604, 893, 1089
FokI	GGATG	3 cut(s)	691, 1097, 1225
FriOI	GRGCYC	3 cut(s)	170, 654, 759
Fsp4HI	GCNGC	7 cut(s)	144, 410, 453, 513, 604, 893, 1089
FspBI	CTAG	2 cut(s)	810, 978
GlaI	GCGC	3 cut(s)	202, 308, 476
GluI	GCNGC	7 cut(s)	144, 410, 453, 513, 604, 893, 1089
GsuI	CTGGAG	3 cut(s)	38, 182, 743
HaeII	RGCGCY	1 cut(s)	204
HaeIII	GGCC	3 cut(s)	606, 632, 717
HapII	CCGG	5 cut(s)	136, 456, 600, 729, 896
HgaI	GACGC	1 cut(s)	424
HhaI	GCGC	3 cut(s)	203, 309, 477
Hin1I	GRCGYC	1 cut(s)	435
Hin1II	CATG	7 cut(s)	73, 307, 340, 448, 463, 1153, 1195
Hin6I	GCGC	3 cut(s)	201, 307, 475
HinP1I	GCGC	3 cut(s)	201, 307, 475
HincII	GTYRAC	1 cut(s)	838
HindII	GTYRAC	1 cut(s)	838
HindIII	AAGCTT	1 cut(s)	480
HinfI	GANTC	5 cut(s)	5, 20, 176, 389, 740
HpaII	CCGG	5 cut(s)	136, 456, 600, 729, 896
HphI	GGTGA	3 cut(s)	238, 514, 803
Hpy166II	GTNNAC	5 cut(s)	94, 157, 282, 522, 838
Hpy188I	TCNGA	6 cut(s)	187, 739, 817, 943, 970, 1003
Hpy188III	TCNNGA	2 cut(s)	136, 292
Hpy8I	GTNNAC	5 cut(s)	94, 157, 282, 522, 838
Hpy99I	CGWCG	6 cut(s)	124, 127, 130, 133, 512, 647
HpyAV	CCTTC	6 cut(s)	126, 191, 259, 328, 872, 1074
HpyCH4III	ACNGT	5 cut(s)	685, 806, 824, 842, 955
HpyCH4V	TGCA	6 cut(s)	69, 704, 1052, 1114, 1184, 1195
HpyF10VI	GCNNNNNNNGC	3 cut(s)	593, 889, 1181
HpyF3I	CTNAG	1 cut(s)	1122
Hsp92I	GRCGYC	1 cut(s)	435
Hsp92II	CATG	7 cut(s)	73, 307, 340, 448, 463, 1153, 1195
HspAI	GCGC	3 cut(s)	201, 307, 475
Kpn2I	TCCGGA	1 cut(s)	135
KroI	GCCGGC	1 cut(s)	455
KroNI	GCCGGC	1 cut(s)	457
Kzo9I	GATC	3 cut(s)	24, 132, 1154
LguI	GCTCTTC	1 cut(s)	419
LmnI	GCTCC	5 cut(s)	267, 649, 657, 752, 762
Lsp1109I	GCAGC	4 cut(s)	396, 499, 879, 1075
LweI	GCATC	5 cut(s)	21, 713, 1007, 1061, 1075
MabI	ACCWGGT	1 cut(s)	150
MaeI	CTAG	2 cut(s)	810, 978
MaeIII	GTNAC	4 cut(s)	244, 866, 1058, 1202
MalI	GATC	3 cut(s)	26, 134, 1156
MboI	GATC	3 cut(s)	24, 132, 1154
MboII	GAAGA	5 cut(s)	214, 307, 313, 343, 406
MflI	RGATCY	1 cut(s)	1154
MhlI	GDGCHC	5 cut(s)	170, 264, 654, 759, 910
MluCI	AATT	4 cut(s)	286, 418, 527, 1005
MlyI	GAGTC	4 cut(s)	14, 29, 170, 383
Mph1103I	ATGCAT	2 cut(s)	706, 1197
MroI	TCCGGA	1 cut(s)	135
MroNI	GCCGGC	1 cut(s)	455
MseI	TTAA	1 cut(s)	612
MspI	CCGG	5 cut(s)	136, 456, 600, 729, 896
MspR9I	CCNGG	7 cut(s)	17, 152, 161, 600, 730, 761, 789
Mva1269I	GAATGC	1 cut(s)	1195
MvaI	CCWGG	5 cut(s)	17, 152, 161, 761, 789
MvnI	CGCG	1 cut(s)	642
MwoI	GCNNNNNNNGC	3 cut(s)	593, 889, 1181
NaeI	GCCGGC	1 cut(s)	457
NciI	CCSGG	2 cut(s)	600, 730
NcoI	CCATGG	1 cut(s)	336
NdeII	GATC	3 cut(s)	24, 132, 1154
NgoMIV	GCCGGC	1 cut(s)	455
NlaIII	CATG	7 cut(s)	73, 307, 340, 448, 463, 1153, 1195
NlaIV	GGNNCC	3 cut(s)	346, 607, 748
NmuCI	GTSAC	1 cut(s)	244
NsiI	ATGCAT	2 cut(s)	706, 1197
NspI	RCATGY	3 cut(s)	73, 307, 463
PaeI	GCATGC	1 cut(s)	463
PciSI	GCTCTTC	1 cut(s)	419
PcsI	WCGNNNNNNNCGW	5 cut(s)	116, 125, 128, 573, 1068
PctI	GAATGC	1 cut(s)	1195
PdiI	GCCGGC	1 cut(s)	457
PfeI	GAWTC	1 cut(s)	740
PflFI	GACNNNGTC	1 cut(s)	779
PfoI	TCCNGGA	1 cut(s)	15
PkrI	GCNGC	7 cut(s)	145, 411, 454, 514, 605, 894, 1090
Ple19I	CGATCG	1 cut(s)	27
PleI	GAGTC	4 cut(s)	13, 28, 170, 383
PpsI	GAGTC	4 cut(s)	13, 28, 170, 383
Psp124BI	GAGCTC	2 cut(s)	654, 759
Psp6I	CCWGG	5 cut(s)	15, 150, 159, 759, 787
PspGI	CCWGG	5 cut(s)	15, 150, 159, 759, 787
PspN4I	GGNNCC	3 cut(s)	346, 607, 748
PspPI	GGNCC	4 cut(s)	138, 540, 605, 715
PsuI	RGATCY	1 cut(s)	1154
PsyI	GACNNNGTC	1 cut(s)	779
PvuI	CGATCG	1 cut(s)	27
RsaI	GTAC	1 cut(s)	158
RsaNI	GTAC	1 cut(s)	157
Rsr2I	CGGWCCG	1 cut(s)	138
RsrII	CGGWCCG	1 cut(s)	138
SacI	GAGCTC	2 cut(s)	654, 759
SapI	GCTCTTC	1 cut(s)	419
SaqAI	TTAA	1 cut(s)	612
SatI	GCNGC	7 cut(s)	144, 410, 453, 513, 604, 893, 1089
Sau3AI	GATC	3 cut(s)	24, 132, 1154
Sau96I	GGNCC	4 cut(s)	138, 540, 605, 715
SchI	GAGTC	4 cut(s)	14, 29, 170, 383
ScrFI	CCNGG	7 cut(s)	17, 152, 161, 600, 730, 761, 789
SduI	GDGCHC	5 cut(s)	170, 264, 654, 759, 910
SexAI	ACCWGGT	1 cut(s)	150
SfaNI	GCATC	5 cut(s)	21, 713, 1007, 1061, 1075
SinI	GGWCC	2 cut(s)	138, 540
SphI	GCATGC	1 cut(s)	463
Sse9I	AATT	4 cut(s)	286, 418, 527, 1005
SsiI	CCGC	7 cut(s)	141, 144, 315, 453, 603, 640, 657
SspMI	CTAG	2 cut(s)	810, 978
SstI	GAGCTC	2 cut(s)	654, 759
StyD4I	CCNGG	7 cut(s)	15, 150, 159, 598, 728, 759, 787
StyI	CCWWGG	3 cut(s)	336, 711, 849
TaaI	ACNGT	5 cut(s)	685, 806, 824, 842, 955
TaqI	TCGA	8 cut(s)	8, 23, 110, 131, 179, 195, 387, 770
TasI	AATT	4 cut(s)	286, 418, 527, 1005
TauI	GCSGC	3 cut(s)	146, 455, 606
TfiI	GAWTC	1 cut(s)	740
Tru1I	TTAA	1 cut(s)	612
Tru9I	TTAA	1 cut(s)	612
TscAI	CASTG	5 cut(s)	63, 829, 915, 937, 997
TseFI	GTSAC	1 cut(s)	244
TseI	GCWGC	4 cut(s)	409, 512, 892, 1088
Tsp45I	GTSAC	1 cut(s)	244
TspDTI	ATGAA	3 cut(s)	813, 1180, 1229
TspGWI	ACGGA	2 cut(s)	739, 885
TspRI	CASTG	5 cut(s)	63, 829, 915, 937, 997
Tth111I	GACNNNGTC	1 cut(s)	779
VpaK11BI	GGWCC	2 cut(s)	138, 540
XceI	RCATGY	3 cut(s)	73, 307, 463
XmiI	GTMKAC	1 cut(s)	93
XspI	CTAG	2 cut(s)	810, 978
Zsp2I	ATGCAT	2 cut(s)	706, 1197

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.