Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0014054

Physical Location & Seq

Genomic Coordinates Forward (+)

43389311 .. 43393921

Gene Structure 4611 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG355000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1371 bp

ATGGAGTCGAGCATCCTGGAGTCGATCGGCGTTGAAATCATCGGTGTAATGTCGCCAGTGTCTATCTGCATGTTCCTTGTCGTCCTTTTAGTCTACGCCCTCTCCCCCTCGAACCCTTCACCCTCGTCGTCGTCGATCCGGACCGCCGCAAACCTGGTGTACCTGGAGAGCCCCACCGACTCGACCTCCGAAAAGCTCGAAGGCGCTCTCCTCAACGCCCTCGTCTTCGTTATTCTCATCGCCCTCGTCACCTTCCTCCTCGTGCTCCTCTACTACTACAAGTTCACTAATTTCTTGAAGAACTACATGCGCTTCTCCGCCTTCTTCGTCCTCGCCACCATGGGAGGTTCCATCTTCCTCTCCATTATCCAGCATTTCTCCATACCCATCGACTTCATCACTTGCTTTCTGCTGCTCTTCAATTTCACTCTTGTCGGCGTCTTGTCCATGTTCGCCGCCGGCATGCCTATTCTCTTGCGCCAAGCTTATATGGTCTGCTTGGGCATTATCGTCGCTGCTTGGTTCACCAAATTGCCCGAATGGACCACTTGGGTTCTGCTTGTCGCTCTCGCTCTCTACGATTTGGTAGCTGTTCTCGCCCCCGGCGGCCCCCTTAAACTCCTCGTTGAGTTGGCCTCCACCCGCGACGAGGAGCTCCCCGCTTTGGTTTATGAGGCTCGCCCCACCGTCCCCCGAAACGCAAATGCATCCTCCTTGGGCCTTTTGGTTGCCGGGGTTTCCGATTCTGGCTCCGTTGAGCTCCAGGCTGTTTCGAGGGACAATGTCAGTCCAGGTGAGAATGAAAACCGTGCTAGTTCAGACGACAGTGTGATTGAGGTTGACAGTTTCGCCAAGGAGGGAGGTCAAAGTAACGGAGACGAAGGGCAGAGGTTACTGCCGGTGGATAGGGCACTGGGTAGGCACTCGTCAAGCAGTGATACTTCGGAGTATTCAACTGTCAATGTTCCCTCTGATAGAGCTAGGCAGTTTGGCAGTGTAGCATCTGAAATTGCTGCGGATGAGGAGATGTCTCCTCTTGTTCAAATGTCTGGATCAGGTAACGAGAGAGACGAGTTGAGAAGGGATGCTGCTGAAATGTTCAGTAGAGGTATTAAACTCGGTCTTGGTGATTTCATTTTCTACAGTGTTCTAGTGGGCAGAGCTGCAATGTATGACCTTATGACTGTGTATGCCTGTTATCTTGCCATTATTTCGGGACTTGGGTGCACTCTCATCTTGTTGTCAGTATGCCATCGAGCTTTGCCTGCTCTGCCCATATCTATTGCATTGGGTGTTATTTTTTACTTCTTGACTCGGTTATTAATGGAACCCTTTGTTGTTGGGGCAGCCACAAATTTACTGATGTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005798 GO:0005886 GO:0005887 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0016020 GO:0016021 GO:0016787 GO:0019538 GO:0031224 GO:0031226 GO:0031410 GO:0031982 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0070011 GO:0071704 GO:0071944 GO:0097708 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04310 ko04330 ko04722 ko05010 ko05165 map04310 map04330 map04722 map05010 map05165

Pfam Domains

Protein Families

Presenilin

Protein Analysis

456

Amino Acids

49.34

Weight (kDa)

4.66

Isoelectric Point (pI)

48.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Presenilin	PF01080	10 - 446	1.7e-128	Presenilin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014054)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08700
fragaria_vesca	FvH4_1g29640 FvH4_1g29640 FvH4_1g29640
malus_domestica	MD06G1041600.v1.1
prunus_persica	Prupe.5G048300_v2.0.a1
pyrus_communis	pycom06g03510
rosa_chinensis	RchiOBHm_Chr3g0495681
rosa_laevigata	RLG00000022596
rosa_multiflora	Rmu_sc0005747.1_g000009
rosa_roxburghii	Rroxscaffold_6G00390140
rosa_rugosa	Rorug03G0275600
rosa_samantha	Rh3AG322900 Rh3BG358400 Rh3CG355000 Rh3DG358300
rosa_wichuraiana	Rw3G028240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	93
AccII	CGCG	1 cut(s)	645
AccIII	TCCGGA	1 cut(s)	138
AciI	CCGC	8 cut(s)	144, 147, 318, 456, 606, 643, 660, 1016
AclWI	GGATC	2 cut(s)	130, 1060
AcsI	RAATTY	1 cut(s)	1354
AcyI	GRCGYC	1 cut(s)	438
AfaI	GTAC	1 cut(s)	161
AfiI	CCNNNNNNNGG	2 cut(s)	649, 664
AgsI	TTSAA	5 cut(s)	35, 298, 421, 954, 1043
AjnI	CCWGG	5 cut(s)	15, 153, 162, 762, 790
AluBI	AGCT	8 cut(s)	196, 485, 590, 655, 760, 980, 1163, 1259
AluI	AGCT	8 cut(s)	196, 485, 590, 655, 760, 980, 1163, 1259
Alw21I	GWGCWC	4 cut(s)	267, 657, 762, 1229
Alw26I	GTCTC	3 cut(s)	870, 1035, 1062
Alw44I	GTGCAC	1 cut(s)	1225
AlwI	GGATC	2 cut(s)	130, 1060
Aor13HI	TCCGGA	1 cut(s)	138
AoxI	GGCC	3 cut(s)	607, 633, 718
ApaLI	GTGCAC	1 cut(s)	1225
ApeKI	GCWGC	6 cut(s)	412, 515, 1013, 1088, 1163, 1346
ApoI	RAATTY	1 cut(s)	1354
AseI	ATTAAT	1 cut(s)	1322
AspLEI	GCGC	3 cut(s)	206, 312, 480
AspS9I	GGNCC	4 cut(s)	141, 543, 608, 718
AsuC2I	CCSGG	2 cut(s)	603, 733
AsuHPI	GGTGA	5 cut(s)	111, 241, 517, 806, 1139
AvaII	GGWCC	2 cut(s)	141, 543
BaeGI	GKGCMC	2 cut(s)	913, 1229
BanII	GRGCYC	3 cut(s)	173, 657, 762
BauI	CACGAG	1 cut(s)	260
BbsI	GAAGAC	1 cut(s)	217
Bbv12I	GWGCWC	4 cut(s)	267, 657, 762, 1229
BbvI	GCAGC	6 cut(s)	399, 502, 1000, 1075, 1150, 1358
BccI	CCATC	3 cut(s)	359, 395, 1260
BcgI	CGANNNNNNTGC	2 cut(s)	493, 527
BciT130I	CCWGG	5 cut(s)	17, 155, 164, 764, 792
BcnI	CCSGG	2 cut(s)	603, 733
BcoDI	GTCTC	3 cut(s)	870, 1035, 1062
BfaI	CTAG	3 cut(s)	813, 981, 1151
BfmI	CTRYAG	1 cut(s)	1141
BfoI	RGCGCY	1 cut(s)	207
BisI	GCNGC	9 cut(s)	147, 413, 456, 516, 607, 1014, 1089, 1164, 1347
BlsI	GCNGC	9 cut(s)	148, 414, 457, 517, 608, 1015, 1090, 1165, 1348
Bme1390I	CCNGG	7 cut(s)	17, 155, 164, 603, 733, 764, 792
Bme18I	GGWCC	2 cut(s)	141, 543
BmgT120I	GGNCC	4 cut(s)	141, 543, 608, 718
BmiI	GGNNCC	4 cut(s)	349, 610, 751, 1329
BmrFI	CCNGG	7 cut(s)	17, 155, 164, 603, 733, 764, 792
BmrI	ACTGGG	1 cut(s)	923
BmsI	GCATC	4 cut(s)	21, 716, 1010, 1075
BmuI	ACTGGG	1 cut(s)	923
BpiI	GAAGAC	1 cut(s)	217
BplI	GAGNNNNNCTC	2 cut(s)	620, 652
BpmI	CTGGAG	3 cut(s)	38, 185, 746
BpuMI	CCSGG	2 cut(s)	603, 733
BsaHI	GRCGYC	1 cut(s)	438
BsaJI	CCNNGG	5 cut(s)	339, 601, 714, 732, 852
BsaWI	WCCGGW	1 cut(s)	138
BsaXI	ACNNNNNCTCC	4 cut(s)	86, 116, 170, 200
Bsc4I	CCNNNNNNNGG	2 cut(s)	649, 664
Bse118I	RCCGGY	2 cut(s)	458, 898
Bse1I	ACTGG	2 cut(s)	56, 918
Bse3DI	GCAATG	1 cut(s)	1173
BseAI	TCCGGA	1 cut(s)	138
BseBI	CCWGG	5 cut(s)	17, 155, 164, 764, 792
BseDI	CCNNGG	5 cut(s)	339, 601, 714, 732, 852
BseGI	GGATG	4 cut(s)	12, 707, 1024, 1090
BseLI	CCNNNNNNNGG	2 cut(s)	649, 664
BseMI	GCAATG	1 cut(s)	1173
BseNI	ACTGG	2 cut(s)	56, 918
BseRI	GAGGAG	7 cut(s)	200, 248, 257, 611, 665, 1023, 1037
BseSI	GKGCMC	2 cut(s)	913, 1229
BseXI	GCAGC	6 cut(s)	399, 502, 1000, 1075, 1150, 1358
Bsh1236I	CGCG	1 cut(s)	645
Bsh1285I	CGRYCG	1 cut(s)	27
BshFI	GGCC	3 cut(s)	609, 635, 720
BsiEI	CGRYCG	1 cut(s)	27
BsiHKAI	GWGCWC	4 cut(s)	267, 657, 762, 1229
BsiSI	CCGG	5 cut(s)	139, 459, 603, 732, 899
BslFI	GGGAC	3 cut(s)	674, 791, 1230
BslI	CCNNNNNNNGG	2 cut(s)	649, 664
BsmAI	GTCTC	3 cut(s)	870, 1035, 1062
BsmBI	CGTCTC	2 cut(s)	870, 1062
BsmFI	GGGAC	3 cut(s)	674, 791, 1230
BsnI	GGCC	3 cut(s)	609, 635, 720
Bsp1286I	GDGCHC	6 cut(s)	173, 267, 657, 762, 913, 1229
Bsp13I	TCCGGA	1 cut(s)	138
Bsp143I	GATC	3 cut(s)	24, 135, 1052
Bsp19I	CCATGG	1 cut(s)	339
BspACI	CCGC	8 cut(s)	144, 147, 318, 456, 606, 643, 660, 1016
BspANI	GGCC	3 cut(s)	609, 635, 720
BspEI	TCCGGA	1 cut(s)	138
BspFNI	CGCG	1 cut(s)	645
BspLI	GGNNCC	4 cut(s)	349, 610, 751, 1329
BspPI	GGATC	2 cut(s)	130, 1060
BspQI	GCTCTTC	1 cut(s)	422
BsrDI	GCAATG	1 cut(s)	1173
BsrFI	RCCGGY	2 cut(s)	458, 898
BsrI	ACTGG	2 cut(s)	56, 918
BssAI	RCCGGY	2 cut(s)	458, 898
BssECI	CCNNGG	5 cut(s)	339, 601, 714, 732, 852
BssMI	GATC	3 cut(s)	24, 135, 1052
BssNI	GRCGYC	1 cut(s)	438
BssSI	CACGAG	1 cut(s)	260
BssT1I	CCWWGG	3 cut(s)	339, 714, 852
Bst2BI	CACGAG	1 cut(s)	260
Bst2UI	CCWGG	5 cut(s)	17, 155, 164, 764, 792
Bst4CI	ACNGT	7 cut(s)	688, 809, 827, 845, 958, 1145, 1186
Bst6I	CTCTTC	1 cut(s)	422
BstACI	GRCGYC	1 cut(s)	438
BstC8I	GCNNGC	4 cut(s)	460, 464, 679, 1266
BstDSI	CCRYGG	1 cut(s)	339
BstF5I	GGATG	4 cut(s)	12, 707, 1024, 1090
BstFNI	CGCG	1 cut(s)	645
BstH2I	RGCGCY	1 cut(s)	207
BstHHI	GCGC	3 cut(s)	206, 312, 480
BstKTI	GATC	3 cut(s)	27, 138, 1055
BstMAI	GTCTC	3 cut(s)	870, 1035, 1062
BstMBI	GATC	3 cut(s)	24, 135, 1052
BstMCI	CGRYCG	1 cut(s)	27
BstMWI	GCNNNNNNNGC	3 cut(s)	596, 1265, 1270
BstNI	CCWGG	5 cut(s)	17, 155, 164, 764, 792
BstNSI	RCATGY	3 cut(s)	73, 310, 466
BstSCI	CCNGG	7 cut(s)	15, 153, 162, 601, 731, 762, 790
BstSFI	CTRYAG	1 cut(s)	1141
BstSLI	GKGCMC	2 cut(s)	913, 1229
BstUI	CGCG	1 cut(s)	645
BstV1I	GCAGC	6 cut(s)	399, 502, 1000, 1075, 1150, 1358
BstV2I	GAAGAC	1 cut(s)	217
BsuRI	GGCC	3 cut(s)	609, 635, 720
BtgI	CCRYGG	1 cut(s)	339
BtgZI	GCGATG	1 cut(s)	223
BtsCI	GGATG	4 cut(s)	12, 707, 1024, 1090
BtsI	GCAGTG	2 cut(s)	940, 1000
BtsIMutI	CAGTG	6 cut(s)	63, 832, 911, 940, 1000, 1150
Cac8I	GCNNGC	4 cut(s)	460, 464, 679, 1266
CfoI	GCGC	3 cut(s)	206, 312, 480
Cfr10I	RCCGGY	2 cut(s)	458, 898
Cfr13I	GGNCC	4 cut(s)	141, 543, 608, 718
CpoI	CGGWCCG	1 cut(s)	141
CseI	GACGC	1 cut(s)	427
CsiI	ACCWGGT	1 cut(s)	153
Csp6I	GTAC	1 cut(s)	160
CspI	CGGWCCG	1 cut(s)	141
CviAII	CATG	5 cut(s)	70, 307, 340, 448, 463
CviQI	GTAC	1 cut(s)	160
DpnI	GATC	3 cut(s)	26, 137, 1054
DpnII	GATC	3 cut(s)	24, 135, 1052
Eam1104I	CTCTTC	1 cut(s)	422
EarI	CTCTTC	1 cut(s)	422
EciI	GGCGGA	1 cut(s)	307
Ecl136II	GAGCTC	2 cut(s)	655, 760
Eco130I	CCWWGG	3 cut(s)	339, 714, 852
Eco24I	GRGCYC	3 cut(s)	173, 657, 762
Eco47I	GGWCC	2 cut(s)	141, 543
Eco53kI	GAGCTC	2 cut(s)	655, 760
EcoICRI	GAGCTC	2 cut(s)	655, 760
EcoRII	CCWGG	5 cut(s)	15, 153, 162, 762, 790
EcoT14I	CCWWGG	3 cut(s)	339, 714, 852
EcoT22I	ATGCAT	1 cut(s)	709
EcoT38I	GRGCYC	3 cut(s)	173, 657, 762
ErhI	CCWWGG	3 cut(s)	339, 714, 852
Esp3I	CGTCTC	2 cut(s)	870, 1062
FaeI	CATG	5 cut(s)	73, 310, 343, 451, 466
FaqI	GGGAC	3 cut(s)	674, 791, 1230
FatI	CATG	5 cut(s)	69, 306, 339, 447, 462
FauI	CCCGC	2 cut(s)	650, 667
FblI	GTMKAC	1 cut(s)	93
Fnu4HI	GCNGC	9 cut(s)	147, 413, 456, 516, 607, 1014, 1089, 1164, 1347
FokI	GGATG	3 cut(s)	694, 1031, 1097
FriOI	GRGCYC	3 cut(s)	173, 657, 762
Fsp4HI	GCNGC	9 cut(s)	147, 413, 456, 516, 607, 1014, 1089, 1164, 1347
FspBI	CTAG	3 cut(s)	813, 981, 1151
GlaI	GCGC	3 cut(s)	205, 311, 479
GluI	GCNGC	9 cut(s)	147, 413, 456, 516, 607, 1014, 1089, 1164, 1347
GsuI	CTGGAG	3 cut(s)	38, 185, 746
HaeII	RGCGCY	1 cut(s)	207
HaeIII	GGCC	3 cut(s)	609, 635, 720
HapII	CCGG	5 cut(s)	139, 459, 603, 732, 899
HgaI	GACGC	1 cut(s)	427
HhaI	GCGC	3 cut(s)	206, 312, 480
Hin1I	GRCGYC	1 cut(s)	438
Hin1II	CATG	5 cut(s)	73, 310, 343, 451, 466
Hin6I	GCGC	3 cut(s)	204, 310, 478
HinP1I	GCGC	3 cut(s)	204, 310, 478
HincII	GTYRAC	1 cut(s)	841
HindII	GTYRAC	1 cut(s)	841
HindIII	AAGCTT	1 cut(s)	483
HinfI	GANTC	5 cut(s)	5, 20, 179, 743, 1312
HpaII	CCGG	5 cut(s)	139, 459, 603, 732, 899
HphI	GGTGA	5 cut(s)	111, 241, 517, 806, 1139
Hpy166II	GTNNAC	6 cut(s)	94, 160, 285, 525, 841, 1227
Hpy188I	TCNGA	6 cut(s)	190, 742, 820, 946, 973, 1006
Hpy188III	TCNNGA	5 cut(s)	139, 295, 1050, 1215, 1309
Hpy8I	GTNNAC	6 cut(s)	94, 160, 285, 525, 841, 1227
Hpy99I	CGWCG	5 cut(s)	130, 133, 136, 515, 650
HpyAV	CCTTC	6 cut(s)	126, 194, 262, 331, 875, 1074
HpyCH4III	ACNGT	7 cut(s)	688, 809, 827, 845, 958, 1145, 1186
HpyCH4V	TGCA	5 cut(s)	69, 707, 1166, 1227, 1286
HpyF10VI	GCNNNNNNNGC	3 cut(s)	596, 1265, 1270
Hsp92I	GRCGYC	1 cut(s)	438
Hsp92II	CATG	5 cut(s)	73, 310, 343, 451, 466
HspAI	GCGC	3 cut(s)	204, 310, 478
Kpn2I	TCCGGA	1 cut(s)	138
KroI	GCCGGC	1 cut(s)	458
KroNI	GCCGGC	1 cut(s)	460
Kzo9I	GATC	3 cut(s)	24, 135, 1052
LguI	GCTCTTC	1 cut(s)	422
LmnI	GCTCC	5 cut(s)	270, 652, 660, 755, 765
Lsp1109I	GCAGC	6 cut(s)	399, 502, 1000, 1075, 1150, 1358
LweI	GCATC	4 cut(s)	21, 716, 1010, 1075
MabI	ACCWGGT	1 cut(s)	153
MaeI	CTAG	3 cut(s)	813, 981, 1151
MaeIII	GTNAC	4 cut(s)	247, 869, 891, 1058
MalI	GATC	3 cut(s)	26, 137, 1054
MboI	GATC	3 cut(s)	24, 135, 1052
MboII	GAAGA	5 cut(s)	217, 310, 316, 346, 409
MhlI	GDGCHC	6 cut(s)	173, 267, 657, 762, 913, 1229
MluCI	AATT	5 cut(s)	289, 421, 530, 1008, 1354
MlyI	GAGTC	4 cut(s)	14, 29, 173, 1306
Mph1103I	ATGCAT	1 cut(s)	709
MroI	TCCGGA	1 cut(s)	138
MroNI	GCCGGC	1 cut(s)	458
MseI	TTAA	3 cut(s)	615, 1113, 1322
MspI	CCGG	5 cut(s)	139, 459, 603, 732, 899
MspR9I	CCNGG	7 cut(s)	17, 155, 164, 603, 733, 764, 792
MvaI	CCWGG	5 cut(s)	17, 155, 164, 764, 792
MvnI	CGCG	1 cut(s)	645
MwoI	GCNNNNNNNGC	3 cut(s)	596, 1265, 1270
NaeI	GCCGGC	1 cut(s)	460
NciI	CCSGG	2 cut(s)	603, 733
NcoI	CCATGG	1 cut(s)	339
NdeII	GATC	3 cut(s)	24, 135, 1052
NgoMIV	GCCGGC	1 cut(s)	458
NlaIII	CATG	5 cut(s)	73, 310, 343, 451, 466
NlaIV	GGNNCC	4 cut(s)	349, 610, 751, 1329
NmuCI	GTSAC	1 cut(s)	247
NsiI	ATGCAT	1 cut(s)	709
NspI	RCATGY	3 cut(s)	73, 310, 466
PaeI	GCATGC	1 cut(s)	466
PciSI	GCTCTTC	1 cut(s)	422
PcsI	WCGNNNNNNNCGW	3 cut(s)	131, 576, 1068
PdiI	GCCGGC	1 cut(s)	460
PfeI	GAWTC	1 cut(s)	743
PflFI	GACNNNGTC	1 cut(s)	782
PfoI	TCCNGGA	1 cut(s)	15
PkrI	GCNGC	9 cut(s)	148, 414, 457, 517, 608, 1015, 1090, 1165, 1348
Ple19I	CGATCG	1 cut(s)	27
PleI	GAGTC	4 cut(s)	13, 28, 173, 1306
PpsI	GAGTC	4 cut(s)	13, 28, 173, 1306
PshBI	ATTAAT	1 cut(s)	1322
Psp124BI	GAGCTC	2 cut(s)	657, 762
Psp6I	CCWGG	5 cut(s)	15, 153, 162, 762, 790
PspGI	CCWGG	5 cut(s)	15, 153, 162, 762, 790
PspN4I	GGNNCC	4 cut(s)	349, 610, 751, 1329
PspPI	GGNCC	4 cut(s)	141, 543, 608, 718
PsyI	GACNNNGTC	1 cut(s)	782
PvuI	CGATCG	1 cut(s)	27
RsaI	GTAC	1 cut(s)	161
RsaNI	GTAC	1 cut(s)	160
Rsr2I	CGGWCCG	1 cut(s)	141
RsrII	CGGWCCG	1 cut(s)	141
SacI	GAGCTC	2 cut(s)	657, 762
SapI	GCTCTTC	1 cut(s)	422
SaqAI	TTAA	3 cut(s)	615, 1113, 1322
SatI	GCNGC	9 cut(s)	147, 413, 456, 516, 607, 1014, 1089, 1164, 1347
Sau3AI	GATC	3 cut(s)	24, 135, 1052
Sau96I	GGNCC	4 cut(s)	141, 543, 608, 718
SchI	GAGTC	4 cut(s)	14, 29, 173, 1306
ScrFI	CCNGG	7 cut(s)	17, 155, 164, 603, 733, 764, 792
SduI	GDGCHC	6 cut(s)	173, 267, 657, 762, 913, 1229
SexAI	ACCWGGT	1 cut(s)	153
SfaNI	GCATC	4 cut(s)	21, 716, 1010, 1075
SfcI	CTRYAG	1 cut(s)	1141
SinI	GGWCC	2 cut(s)	141, 543
SphI	GCATGC	1 cut(s)	466
Sse9I	AATT	5 cut(s)	289, 421, 530, 1008, 1354
SsiI	CCGC	8 cut(s)	144, 147, 318, 456, 606, 643, 660, 1016
SspMI	CTAG	3 cut(s)	813, 981, 1151
SstI	GAGCTC	2 cut(s)	657, 762
StyD4I	CCNGG	7 cut(s)	15, 153, 162, 601, 731, 762, 790
StyI	CCWWGG	3 cut(s)	339, 714, 852
TaaI	ACNGT	7 cut(s)	688, 809, 827, 845, 958, 1145, 1186
TaqI	TCGA	9 cut(s)	8, 23, 110, 134, 182, 198, 390, 773, 1255
TaqII	GACCGA	1 cut(s)	1109
TasI	AATT	5 cut(s)	289, 421, 530, 1008, 1354
TauI	GCSGC	3 cut(s)	149, 458, 609
TfiI	GAWTC	1 cut(s)	743
Tru1I	TTAA	3 cut(s)	615, 1113, 1322
Tru9I	TTAA	3 cut(s)	615, 1113, 1322
TscAI	CASTG	6 cut(s)	63, 832, 918, 940, 1000, 1150
TseFI	GTSAC	1 cut(s)	247
TseI	GCWGC	6 cut(s)	412, 515, 1013, 1088, 1163, 1346
Tsp45I	GTSAC	1 cut(s)	247
TspDTI	ATGAA	3 cut(s)	385, 816, 1123
TspGWI	ACGGA	2 cut(s)	742, 888
TspRI	CASTG	6 cut(s)	63, 832, 918, 940, 1000, 1150
Tth111I	GACNNNGTC	1 cut(s)	782
VneI	GTGCAC	1 cut(s)	1225
VpaK11BI	GGWCC	2 cut(s)	141, 543
VspI	ATTAAT	1 cut(s)	1322
XapI	RAATTY	1 cut(s)	1354
XceI	RCATGY	3 cut(s)	73, 310, 466
XmiI	GTMKAC	1 cut(s)	93
XspI	CTAG	3 cut(s)	813, 981, 1151
Zsp2I	ATGCAT	1 cut(s)	709

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.