SPIRAL1-like 5
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G23496 |
| fragaria_vesca | FvH4_5g03030 |
| malus_domestica | MD06G1089300.v1.1 MD06G1158500.v1.1 MD14G1110000.v1.1 |
| prunus_persica | Prupe.5G105200_v2.0.a1 Prupe.5G105300_v2.0.a1 |
| pyrus_communis | pycom06g08520 pycom14g10480 |
| rosa_chinensis | RchiOBHm_Chr7g0196801 |
| rosa_multiflora | Rmu_sc0001083.1_g000028 |
| rosa_roxburghii | Rroxscaffold_3G00258940 |
| rosa_rugosa | Rorug07G0036200 |
| rosa_samantha | Rh7AG160400 Rh7BG162500 Rh7CG168800 Rh7DG161700 |
| rosa_wichuraiana | Rw7G014020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 3 cut(s) | 143, 190, 223 |
| AcuI | CTGAAG | 2 cut(s) | 159, 234 |
| AfaI | GTAC | 2 cut(s) | 47, 299 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 113 |
| AgsI | TTSAA | 1 cut(s) | 87 |
| AjnI | CCWGG | 1 cut(s) | 274 |
| AluBI | AGCT | 6 cut(s) | 18, 36, 92, 212, 272, 311 |
| AluI | AGCT | 6 cut(s) | 18, 36, 92, 212, 272, 311 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 275 |
| AoxI | GGCC | 1 cut(s) | 217 |
| ApoI | RAATTY | 3 cut(s) | 143, 190, 223 |
| BciT130I | CCWGG | 1 cut(s) | 276 |
| BclI | TGATCA | 1 cut(s) | 64 |
| BlpI | GCTNAGC | 1 cut(s) | 93 |
| Bme1390I | CCNGG | 1 cut(s) | 276 |
| BmrFI | CCNGG | 1 cut(s) | 276 |
| BmsI | GCATC | 1 cut(s) | 126 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 93 |
| Bsa29I | ATCGAT | 1 cut(s) | 120 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 7, 37 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 113 |
| Bse1I | ACTGG | 1 cut(s) | 98 |
| BseBI | CCWGG | 1 cut(s) | 276 |
| BseCI | ATCGAT | 1 cut(s) | 120 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 113 |
| BseMII | CTCAG | 1 cut(s) | 72 |
| BseNI | ACTGG | 1 cut(s) | 98 |
| BshFI | GGCC | 1 cut(s) | 219 |
| BshVI | ATCGAT | 1 cut(s) | 120 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 113 |
| BsnI | GGCC | 1 cut(s) | 219 |
| Bsp143I | GATC | 2 cut(s) | 64, 244 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 93 |
| BspANI | GGCC | 1 cut(s) | 219 |
| BspCNI | CTCAG | 1 cut(s) | 71 |
| BspDI | ATCGAT | 1 cut(s) | 120 |
| BsrI | ACTGG | 1 cut(s) | 98 |
| BssMI | GATC | 2 cut(s) | 64, 244 |
| Bst2UI | CCWGG | 1 cut(s) | 276 |
| Bst6I | CTCTTC | 1 cut(s) | 178 |
| BstDEI | CTNAG | 3 cut(s) | 58, 93, 312 |
| BstKTI | GATC | 2 cut(s) | 67, 247 |
| BstMBI | GATC | 2 cut(s) | 64, 244 |
| BstNI | CCWGG | 1 cut(s) | 276 |
| BstSCI | CCNGG | 1 cut(s) | 274 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 227 |
| Bsu15I | ATCGAT | 1 cut(s) | 120 |
| BsuRI | GGCC | 1 cut(s) | 219 |
| BsuTUI | ATCGAT | 1 cut(s) | 120 |
| BtsI | GCAGTG | 1 cut(s) | 145 |
| BtsIMutI | CAGTG | 1 cut(s) | 145 |
| CaiI | CAGNNNCTG | 1 cut(s) | 275 |
| ClaI | ATCGAT | 1 cut(s) | 120 |
| Csp6I | GTAC | 2 cut(s) | 46, 298 |
| CviQI | GTAC | 2 cut(s) | 46, 298 |
| DdeI | CTNAG | 3 cut(s) | 58, 93, 312 |
| DpnI | GATC | 2 cut(s) | 66, 246 |
| DpnII | GATC | 2 cut(s) | 64, 244 |
| Eam1104I | CTCTTC | 1 cut(s) | 178 |
| EarI | CTCTTC | 1 cut(s) | 178 |
| Eco57I | CTGAAG | 2 cut(s) | 159, 234 |
| EcoRII | CCWGG | 1 cut(s) | 274 |
| FaiI | YATR | 3 cut(s) | 21, 112, 114 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 67, 99 |
| FauNDI | CATATG | 1 cut(s) | 112 |
| FbaI | TGATCA | 1 cut(s) | 64 |
| HaeIII | GGCC | 1 cut(s) | 219 |
| HinfI | GANTC | 2 cut(s) | 131, 284 |
| Hpy166II | GTNNAC | 1 cut(s) | 80 |
| Hpy188I | TCNGA | 4 cut(s) | 61, 69, 178, 252 |
| Hpy8I | GTNNAC | 1 cut(s) | 80 |
| HpyAV | CCTTC | 2 cut(s) | 93, 209 |
| HpyF3I | CTNAG | 3 cut(s) | 58, 93, 312 |
| Ksp22I | TGATCA | 1 cut(s) | 64 |
| Kzo9I | GATC | 2 cut(s) | 64, 244 |
| LmnI | GCTCC | 3 cut(s) | 15, 277, 308 |
| LpnPI | CCDG | 5 cut(s) | 111, 148, 213, 261, 288 |
| LweI | GCATC | 1 cut(s) | 126 |
| MalI | GATC | 2 cut(s) | 66, 246 |
| MboI | GATC | 2 cut(s) | 64, 244 |
| MboII | GAAGA | 1 cut(s) | 165 |
| MluCI | AATT | 3 cut(s) | 143, 190, 223 |
| MmeI | TCCRAC | 2 cut(s) | 219, 275 |
| MnlI | CCTC | 1 cut(s) | 162 |
| MseI | TTAA | 3 cut(s) | 147, 239, 264 |
| MspR9I | CCNGG | 1 cut(s) | 276 |
| MvaI | CCWGG | 1 cut(s) | 276 |
| NdeI | CATATG | 1 cut(s) | 112 |
| NdeII | GATC | 2 cut(s) | 64, 244 |
| PfeI | GAWTC | 2 cut(s) | 131, 284 |
| Psp6I | CCWGG | 1 cut(s) | 274 |
| PspGI | CCWGG | 1 cut(s) | 274 |
| PstNI | CAGNNNCTG | 1 cut(s) | 275 |
| RsaI | GTAC | 2 cut(s) | 47, 299 |
| RsaNI | GTAC | 2 cut(s) | 46, 298 |
| SaqAI | TTAA | 3 cut(s) | 147, 239, 264 |
| Sau3AI | GATC | 2 cut(s) | 64, 244 |
| ScrFI | CCNGG | 1 cut(s) | 276 |
| SetI | ASST | 8 cut(s) | 13, 20, 38, 85, 94, 214, 274, 313 |
| SfaNI | GCATC | 1 cut(s) | 126 |
| SgeI | CNNG | 8 cut(s) | 61, 110, 147, 240, 287, 288, 305, 313 |
| Sse9I | AATT | 3 cut(s) | 143, 190, 223 |
| StyD4I | CCNGG | 1 cut(s) | 274 |
| TaqI | TCGA | 1 cut(s) | 120 |
| TasI | AATT | 3 cut(s) | 143, 190, 223 |
| TfiI | GAWTC | 2 cut(s) | 131, 284 |
| Tru1I | TTAA | 3 cut(s) | 147, 239, 264 |
| Tru9I | TTAA | 3 cut(s) | 147, 239, 264 |
| TscAI | CASTG | 1 cut(s) | 145 |
| TspDTI | ATGAA | 1 cut(s) | 276 |
| TspRI | CASTG | 1 cut(s) | 145 |
| XapI | RAATTY | 3 cut(s) | 143, 190, 223 |