Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0012968

Physical Location & Seq

Genomic Coordinates Forward (+)

25133015 .. 25139495

Gene Structure 6481 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1113200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2136 bp

ATGACTGTGGCGAGCTCAGTGGTCCATGAAGTGTTGGGCCGGCGGGCCGAGGACGTCGACGAGCCCATAATCGAGTACATCGTCAACGTCCTCGCCGACGAGGACTTCGATTTCGGCGAAGACGGTGAAGGCGCCTTCGAAGCTCTTAGCGAGCTCCTTGTCGGCGCCGGCTGCGTTAGCGACTTCGCTGAGTGTCGCTCCGTTTGTAGTATAATAACAGAGAAGTTCGGGAAACATGGGTTGGTTAAAGCGAAACCGACTGTGCGGAGCCTATCAGCACCTGTAAGAATGGATGATGGGATGAATGAGAAGGTAGCTCCAAAGAAGAAGGTTGAGGTGATTGATGGCCCTGTGTTAACTGAACGTGACCGAGCTAAGATAGAAAGGAAAAAGAGGAAGGATGATCGCCAAAGAGAGCAACAATACCAAATACATTTAGCAGAAATGGAAGCAGTCAGGGCTGGAATGCCTGTTGTAAGTGTAAATCATGAAAGTGCTGGTGGCCCGAATGTCAGGGATATCCGTCTGGAAAACTTCAATGTTTCTGTGGGTGGCCGTGATCTTATTGTGGATGGTTCAGTAACACTTTCTTATGGAAGGCATTATGGCCTTGTTGGAAGAAATGGTACGGGGAAAACAACTTTTCTTAGGCACTTGGCTATGCATGCCATTGATGGCATTCCTAGGAACTTCCAAATATTGCATGTGGAGCAAGAAGTGGTGGGTGATGATACAACAGCCTTGCAGTGTGTTCTTAACACTGATGTTGAAAGAACTAAGCTTATGGAAGAAGAAGCTAGTCTTCTTGCTCAACAGAGGGCACTGGAATTTGAGGACTCAACGGAAAAGGGCAACGGGGAAGTTGAGAAAGATGCCATTGGGCGGAGACTTCAGGAGATATACAAAAGGCTTGAGTTCATTGATGCTGATTCAGCAGAGTCACGGGCAGCTTCCATTCTTGCGGGTCTTAGTTTCTCTCCGGAGATGCAGCGAAAACCAACTAAAGCATTTTCAGGAGGATGGCGAATGCGAATAGCTCTTGCTCGTGCCCTGTTTATAGAGCCTGATTTGTTACTGCTTGATGAACCCACGAACCATCTTGATCTTCATGCTGTCCTCTGGCTGGAGGCTTACCTGGTGAAGTGGCCAAAAACATGCATAGTTGTTTCTCATGCTAGAGAATTCTTGAACACGGTAGTCACTGATATCCTACATCTTCATGGGCAAAAGTTGACTGCTTACAAAGGGGACTATGATACATATGAGAGGACACGAATAGAACTAGTGAAGAACCAACAGAAAGCTTTTGAGGCCAATGAGCGTTCAAGAGCACATATGCAGACTTTTATTGATAAGTTCCGCTACAATGCCAAGAGGGCCGCCCTTGTTCAGTCAAGAATTAAGGCTTTGGACCGGTTGGGACATGTGGATGAGATTGTAAATGACCCTGACTATAAGTTTGAGTTCCCAACTCCAGACGACAGACCTGGTCCTCCTATAATAAGTTTCAGTGATGCATCATTTGGTTATCCTGGCGGACCCGTTTTGTTTAGGAATTTAAATTTTGGAATTGACCTTGACAGCCGCATCGCAATGGTTGGGCCAAATGGTATTGGTAAATCAACGATACTCAAACTAATTGCAGGTGAGCTACAACCAATCTCTGGGACAGTTTTCCGTTCGGCTAAGGTACGGATTGCTGTGTTCAGTCAGCACCACGTTGACGGGCTAGATTTATCTTCTAATCCCTTATTGTATATGATGCGCTGCTTCCCAGGAGTACCTGAACAAAAGCTCCGATCTCACTTGGGTTCTTTAGGTGTCTCTGGAAATCTTGCACTTCAGCCTATGTACACGTTGTCTGGTGGTCAGAAGAGCAGAGTTGCATTTGCCAAGATAACTTTCAAGAAACCGCACATAATATTGCTTGATGAGCCCTCCAATCATCTGGACTTGGATGCTGTGGAGGCACTAATACAAGGTCTTGTGCTCTTCCAAGGAGGCATTCTCATGGTTAGTCACGACGAGCATCTGATCTCTGGAAGTGTGGACGAGCTATGGGTGGTATCAGAAGGTAGGATACAACCATTCCATGGCAGTTTTGAGGACTACAAGAAGATACTGCAGTCGTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0010035 GO:0010038 GO:0042221 GO:0042742 GO:0043207 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0050896 GO:0051704 GO:0051707 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC_tran ABC_tran_Xtn

Protein Analysis

712

Amino Acids

79.15

Weight (kDa)

5.9

Isoelectric Point (pI)

36.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PWI_ABCF3	PF26051	6 - 78	1.5e-13	ABCF3, PWI-like helical bundle domain
ABC_tran	PF00005	193 - 365	1.2e-18	ABC transporter
ABC_tran_Xtn	PF12848	404 - 484	2.1e-23	ABC transporter
ABC_tran	PF00005	518 - 648	4.4e-22	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012968)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64550
fragaria_vesca	FvH4_5g11480 FvH4_5g11480
malus_domestica	MD06G1113200.v1.1 MD14G1134300.v1.1
prunus_persica	Prupe.5G126100_v2.0.a1 Prupe.5G126100_v2.0.a1
pyrus_communis	pycom06g10590
rosa_chinensis	RchiOBHm_Chr7g0186321
rosa_laevigata	RLG00000004849 RLG00000034878
rosa_multiflora	Rmu_sc0000645.1_g000050
rosa_roxburghii	Rroxscaffold_3G00268220
rosa_rugosa	Rorug06G0473500
rosa_samantha	Rh7AG067700 Rh7BG083500 Rh7CG080300
rosa_wichuraiana	Rw7G006730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1634
AatII	GACGTC	1 cut(s)	57
Acc36I	ACCTGC	1 cut(s)	1634
AccB1I	GGYRCC	2 cut(s)	131, 164
AccB7I	CCANNNNNTGG	2 cut(s)	1664, 2093
AccI	GTMKAC	1 cut(s)	57
AccIII	TCCGGA	1 cut(s)	979
AciI	CCGC	9 cut(s)	43, 265, 883, 962, 1360, 1380, 1536, 1585, 1913
AcoI	YGGCCR	2 cut(s)	553, 1145
AcsI	RAATTY	4 cut(s)	827, 1181, 1555, 1561
AcuI	CTGAAG	2 cut(s)	875, 1826
AcyI	GRCGYC	3 cut(s)	54, 132, 165
AfaI	GTAC	5 cut(s)	77, 628, 1692, 1782, 1853
AfiI	CCNNNNNNNGG	4 cut(s)	882, 1123, 1664, 2093
AflIII	ACRYGT	2 cut(s)	1423, 1854
AgeI	ACCGGT	1 cut(s)	1413
AgsI	TTSAA	5 cut(s)	538, 770, 1189, 1326, 1906
AhlI	ACTAGT	1 cut(s)	1282
AjnI	CCWGG	4 cut(s)	1134, 1486, 1531, 1774
AjuI	GAANNNNNNNTTGG	6 cut(s)	224, 256, 1886, 1918, 1989, 2021
AloI	GAACNNNNNNTCC	2 cut(s)	1779, 1811
Alw21I	GWGCWC	4 cut(s)	17, 156, 1333, 1992
Alw26I	GTCTC	2 cut(s)	880, 1828
AlwNI	CAGNNNCTG	1 cut(s)	281
Aor13HI	TCCGGA	1 cut(s)	979
ApeKI	GCWGC	4 cut(s)	171, 947, 988, 1767
ApoI	RAATTY	4 cut(s)	827, 1181, 1555, 1561
ArsI	GACNNNNNNTTYG	6 cut(s)	89, 95, 121, 127, 1442, 1474
AsiGI	ACCGGT	1 cut(s)	1413
AspA2I	CCTAGG	1 cut(s)	683
AspLEI	GCGC	3 cut(s)	134, 167, 1767
AsuHPI	GGTGA	5 cut(s)	137, 349, 737, 1150, 1658
AsuII	TTCGAA	1 cut(s)	138
AvaII	GGWCC	4 cut(s)	22, 1411, 1490, 1538
AvrII	CCTAGG	1 cut(s)	683
BaeGI	GKGCMC	2 cut(s)	823, 1051
BaeI	ACNNNNGTAYC	1 cut(s)	2111
BalI	TGGCCA	1 cut(s)	1147
BanI	GGYRCC	2 cut(s)	131, 164
BanII	GRGCYC	4 cut(s)	17, 66, 156, 1938
BarI	GAAGNNNNNNTAC	4 cut(s)	610, 642, 2064, 2096
BauI	CACGAG	1 cut(s)	1044
BbsI	GAAGAC	2 cut(s)	126, 794
Bbv12I	GWGCWC	4 cut(s)	17, 156, 1333, 1992
BbvI	GCAGC	4 cut(s)	158, 959, 1000, 1754
BccI	CCATC	6 cut(s)	290, 338, 566, 668, 1014, 1104
BceAI	ACGGC	1 cut(s)	540
BciT130I	CCWGG	4 cut(s)	1136, 1488, 1533, 1776
BciVI	GTATCC	1 cut(s)	2073
BcoDI	GTCTC	2 cut(s)	880, 1828
BcuI	ACTAGT	1 cut(s)	1282
BfaI	CTAG	5 cut(s)	684, 798, 1176, 1283, 1730
BfmI	CTRYAG	1 cut(s)	2123
BfoI	RGCGCY	2 cut(s)	135, 168
BfuAI	ACCTGC	1 cut(s)	1634
BfuI	GTATCC	1 cut(s)	2073
BglI	GCCNNNNNGGC	1 cut(s)	1376
BisI	GCNGC	6 cut(s)	172, 948, 989, 1380, 1585, 1768
BlnI	CCTAGG	1 cut(s)	683
BlsI	GCNGC	6 cut(s)	173, 949, 990, 1381, 1586, 1769
Bme1390I	CCNGG	4 cut(s)	1136, 1488, 1533, 1776
Bme18I	GGWCC	4 cut(s)	22, 1411, 1490, 1538
BmiI	GGNNCC	4 cut(s)	133, 166, 269, 1540
BmrFI	CCNGG	4 cut(s)	1136, 1488, 1533, 1776
BmsI	GCATC	9 cut(s)	862, 913, 975, 1504, 1526, 1596, 1752, 1948, 2038
BpiI	GAAGAC	2 cut(s)	126, 794
BplI	GAGNNNNNCTC	4 cut(s)	182, 214, 1992, 2024
BpmI	CTGGAG	2 cut(s)	1145, 1458
Bpu10I	CCTNAGC	1 cut(s)	1686
Bpu14I	TTCGAA	1 cut(s)	138
BpuEI	CTTGAG	1 cut(s)	932
BsaHI	GRCGYC	3 cut(s)	54, 132, 165
BsaJI	CCNNGG	5 cut(s)	48, 683, 1774, 1996, 2092
BsaWI	WCCGGW	2 cut(s)	979, 1413
BsaXI	ACNNNNNCTCC	2 cut(s)	1779, 1809
Bsc4I	CCNNNNNNNGG	4 cut(s)	882, 1123, 1664, 2093
Bse118I	RCCGGY	3 cut(s)	39, 167, 1413
Bse1I	ACTGG	1 cut(s)	828
Bse3DI	GCAATG	1 cut(s)	1599
BseAI	TCCGGA	1 cut(s)	979
BseBI	CCWGG	4 cut(s)	1136, 1488, 1533, 1776
BseDI	CCNNGG	5 cut(s)	48, 683, 1774, 1996, 2092
BseGI	GGATG	7 cut(s)	298, 306, 406, 577, 1025, 1435, 1963
BseLI	CCNNNNNNNGG	4 cut(s)	882, 1123, 1664, 2093
BseMI	GCAATG	1 cut(s)	1599
BseMII	CTCAG	2 cut(s)	30, 180
BseNI	ACTGG	1 cut(s)	828
BseSI	GKGCMC	2 cut(s)	823, 1051
BseXI	GCAGC	4 cut(s)	158, 959, 1000, 1754
BshNI	GGYRCC	2 cut(s)	131, 164
BshTI	ACCGGT	1 cut(s)	1413
BsiHKAI	GWGCWC	4 cut(s)	17, 156, 1333, 1992
BsiSI	CCGG	4 cut(s)	40, 168, 980, 1414
BslFI	GGGAC	3 cut(s)	1262, 1434, 1681
BslI	CCNNNNNNNGG	4 cut(s)	882, 1123, 1664, 2093
BsmAI	GTCTC	2 cut(s)	880, 1828
BsmFI	GGGAC	3 cut(s)	1262, 1434, 1681
BsmI	GAATGC	4 cut(s)	471, 678, 1032, 2004
Bsp119I	TTCGAA	1 cut(s)	138
Bsp1286I	GDGCHC	8 cut(s)	17, 66, 156, 823, 1051, 1333, 1938, 1992
Bsp13I	TCCGGA	1 cut(s)	979
Bsp1407I	TGTACA	1 cut(s)	1851
Bsp143I	GATC	5 cut(s)	403, 559, 1102, 1799, 2034
Bsp19I	CCATGG	1 cut(s)	2092
BspACI	CCGC	9 cut(s)	43, 265, 883, 962, 1360, 1380, 1536, 1585, 1913
BspCNI	CTCAG	2 cut(s)	29, 181
BspEI	TCCGGA	1 cut(s)	979
BspHI	TCATGA	1 cut(s)	487
BspLI	GGNNCC	4 cut(s)	133, 166, 269, 1540
BspMAI	CTGCAG	1 cut(s)	2127
BspMI	ACCTGC	1 cut(s)	1634
BspQI	GCTCTTC	2 cut(s)	1868, 1997
BspT104I	TTCGAA	1 cut(s)	138
BspT107I	GGYRCC	2 cut(s)	131, 164
BsrDI	GCAATG	1 cut(s)	1599
BsrFI	RCCGGY	3 cut(s)	39, 167, 1413
BsrGI	TGTACA	1 cut(s)	1851
BsrI	ACTGG	1 cut(s)	828
BssAI	RCCGGY	3 cut(s)	39, 167, 1413
BssECI	CCNNGG	5 cut(s)	48, 683, 1774, 1996, 2092
BssMI	GATC	5 cut(s)	403, 559, 1102, 1799, 2034
BssNI	GRCGYC	3 cut(s)	54, 132, 165
BssSI	CACGAG	1 cut(s)	1044
BssT1I	CCWWGG	3 cut(s)	683, 1996, 2092
Bst2BI	CACGAG	1 cut(s)	1044
Bst2UI	CCWGG	4 cut(s)	1136, 1488, 1533, 1776
Bst4CI	ACNGT	5 cut(s)	7, 125, 262, 1195, 1672
Bst6I	CTCTTC	2 cut(s)	1868, 1997
BstACI	GRCGYC	3 cut(s)	54, 132, 165
BstAUI	TGTACA	1 cut(s)	1851
BstBI	TTCGAA	1 cut(s)	138
BstC8I	GCNNGC	6 cut(s)	13, 41, 45, 152, 169, 666
BstDEI	CTNAG	8 cut(s)	16, 146, 189, 375, 647, 777, 968, 1686
BstDSI	CCRYGG	1 cut(s)	2092
BstF5I	GGATG	7 cut(s)	298, 306, 406, 577, 1025, 1435, 1963
BstH2I	RGCGCY	2 cut(s)	135, 168
BstHHI	GCGC	3 cut(s)	134, 167, 1767
BstKTI	GATC	5 cut(s)	406, 562, 1105, 1802, 2037
BstMAI	GTCTC	2 cut(s)	880, 1828
BstMBI	GATC	5 cut(s)	403, 559, 1102, 1799, 2034
BstNI	CCWGG	4 cut(s)	1136, 1488, 1533, 1776
BstNSI	RCATGY	4 cut(s)	668, 707, 1158, 1427
BstSCI	CCNGG	4 cut(s)	1134, 1486, 1531, 1774
BstSFI	CTRYAG	1 cut(s)	2123
BstSLI	GKGCMC	2 cut(s)	823, 1051
BstV1I	GCAGC	4 cut(s)	158, 959, 1000, 1754
BstV2I	GAAGAC	2 cut(s)	126, 794
BstXI	CCANNNNNNTGG	1 cut(s)	1948
BsuI	GTATCC	1 cut(s)	2073
BtgI	CCRYGG	1 cut(s)	2092
BtgZI	GCGATG	1 cut(s)	1573
BtsCI	GGATG	7 cut(s)	298, 306, 406, 577, 1025, 1435, 1963
BtsI	GCAGTG	1 cut(s)	752
BtsIMutI	CAGTG	6 cut(s)	24, 752, 759, 821, 1200, 1516
BveI	ACCTGC	1 cut(s)	1634
Cac8I	GCNNGC	6 cut(s)	13, 41, 45, 152, 169, 666
CaiI	CAGNNNCTG	1 cut(s)	281
CciI	TCATGA	1 cut(s)	487
CfoI	GCGC	3 cut(s)	134, 167, 1767
Cfr10I	RCCGGY	3 cut(s)	39, 167, 1413
CsiI	ACCWGGT	2 cut(s)	1134, 1486
Csp6I	GTAC	5 cut(s)	76, 627, 1691, 1781, 1852
CspAI	ACCGGT	1 cut(s)	1413
CviQI	GTAC	5 cut(s)	76, 627, 1691, 1781, 1852
DdeI	CTNAG	8 cut(s)	16, 146, 189, 375, 647, 777, 968, 1686
DinI	GGCGCC	2 cut(s)	133, 166
DpnI	GATC	5 cut(s)	405, 561, 1104, 1801, 2036
DpnII	GATC	5 cut(s)	403, 559, 1102, 1799, 2034
DraI	TTTAAA	1 cut(s)	1560
EaeI	YGGCCR	2 cut(s)	553, 1145
Eam1104I	CTCTTC	2 cut(s)	1868, 1997
EarI	CTCTTC	2 cut(s)	1868, 1997
EciI	GGCGGA	2 cut(s)	898, 1551
Ecl136II	GAGCTC	2 cut(s)	15, 154
Eco130I	CCWWGG	3 cut(s)	683, 1996, 2092
Eco24I	GRGCYC	4 cut(s)	17, 66, 156, 1938
Eco32I	GATATC	2 cut(s)	520, 1207
Eco47I	GGWCC	4 cut(s)	22, 1411, 1490, 1538
Eco53kI	GAGCTC	2 cut(s)	15, 154
Eco57I	CTGAAG	2 cut(s)	875, 1826
EcoICRI	GAGCTC	2 cut(s)	15, 154
EcoRI	GAATTC	1 cut(s)	1181
EcoRII	CCWGG	4 cut(s)	1134, 1486, 1531, 1774
EcoRV	GATATC	2 cut(s)	520, 1207
EcoT14I	CCWWGG	3 cut(s)	683, 1996, 2092
EcoT22I	ATGCAT	3 cut(s)	666, 1160, 1519
EcoT38I	GRGCYC	4 cut(s)	17, 66, 156, 1938
EgeI	GGCGCC	2 cut(s)	133, 166
EheI	GGCGCC	2 cut(s)	133, 166
ErhI	CCWWGG	3 cut(s)	683, 1996, 2092
FalI	AAGNNNNNCTT	2 cut(s)	786, 818
FaqI	GGGAC	3 cut(s)	1262, 1434, 1681
FauI	CCCGC	2 cut(s)	36, 955
FauNDI	CATATG	2 cut(s)	1261, 1335
FblI	GTMKAC	1 cut(s)	57
Fnu4HI	GCNGC	6 cut(s)	172, 948, 989, 1380, 1585, 1768
FokI	GGATG	7 cut(s)	305, 313, 413, 584, 1032, 1442, 1970
FriOI	GRGCYC	4 cut(s)	17, 66, 156, 1938
Fsp4HI	GCNGC	6 cut(s)	172, 948, 989, 1380, 1585, 1768
FspBI	CTAG	5 cut(s)	684, 798, 1176, 1283, 1730
GlaI	GCGC	3 cut(s)	133, 166, 1766
GluI	GCNGC	6 cut(s)	172, 948, 989, 1380, 1585, 1768
GsuI	CTGGAG	2 cut(s)	1145, 1458
HaeII	RGCGCY	2 cut(s)	135, 168
HapII	CCGG	4 cut(s)	40, 168, 980, 1414
HhaI	GCGC	3 cut(s)	134, 167, 1767
Hin1I	GRCGYC	3 cut(s)	54, 132, 165
Hin6I	GCGC	3 cut(s)	132, 165, 1765
HinP1I	GCGC	3 cut(s)	132, 165, 1765
HincII	GTYRAC	5 cut(s)	58, 85, 357, 1233, 1723
HindII	GTYRAC	5 cut(s)	58, 85, 357, 1233, 1723
HindIII	AAGCTT	2 cut(s)	779, 1302
HinfI	GANTC	3 cut(s)	836, 929, 938
HpaI	GTTAAC	1 cut(s)	357
HpaII	CCGG	4 cut(s)	40, 168, 980, 1414
HphI	GGTGA	5 cut(s)	137, 349, 737, 1150, 1658
Hpy166II	GTNNAC	7 cut(s)	58, 85, 357, 1233, 1723, 1854, 2050
Hpy188I	TCNGA	4 cut(s)	1799, 1872, 2034, 2071
Hpy8I	GTNNAC	7 cut(s)	58, 85, 357, 1233, 1723, 1854, 2050
Hpy99I	CGWCG	4 cut(s)	59, 62, 101, 2027
HpyAV	CCTTC	7 cut(s)	122, 145, 304, 322, 391, 591, 2066
HpyCH4III	ACNGT	5 cut(s)	7, 125, 262, 1195, 1672
HpyCH4IV	ACGT	5 cut(s)	54, 87, 364, 1719, 1856
HpyF3I	CTNAG	8 cut(s)	16, 146, 189, 375, 647, 777, 968, 1686
HpySE526I	ACGT	5 cut(s)	54, 87, 364, 1719, 1856
Hsp92I	GRCGYC	3 cut(s)	54, 132, 165
HspAI	GCGC	3 cut(s)	132, 165, 1765
KasI	GGCGCC	2 cut(s)	131, 164
Kpn2I	TCCGGA	1 cut(s)	979
KroI	GCCGGC	2 cut(s)	39, 167
KroNI	GCCGGC	2 cut(s)	41, 169
KspAI	GTTAAC	1 cut(s)	357
Kzo9I	GATC	5 cut(s)	403, 559, 1102, 1799, 2034
LguI	GCTCTTC	2 cut(s)	1868, 1997
LmnI	GCTCC	6 cut(s)	159, 203, 267, 322, 709, 1800
Lsp1109I	GCAGC	4 cut(s)	158, 959, 1000, 1754
LweI	GCATC	9 cut(s)	862, 913, 975, 1504, 1526, 1596, 1752, 1948, 2038
MabI	ACCWGGT	2 cut(s)	1134, 1486
MaeI	CTAG	5 cut(s)	684, 798, 1176, 1283, 1730
MaeII	ACGT	5 cut(s)	54, 87, 364, 1719, 1856
MaeIII	GTNAC	6 cut(s)	365, 580, 939, 1071, 1198, 2018
MalI	GATC	5 cut(s)	405, 561, 1104, 1801, 2036
MboI	GATC	5 cut(s)	403, 559, 1102, 1799, 2034
MhlI	GDGCHC	8 cut(s)	17, 66, 156, 823, 1051, 1333, 1938, 1992
MlsI	TGGCCA	1 cut(s)	1147
MluCI	AATT	7 cut(s)	827, 1181, 1398, 1555, 1561, 1569, 1638
MluNI	TGGCCA	1 cut(s)	1147
Mly113I	GGCGCC	2 cut(s)	132, 165
MlyI	GAGTC	2 cut(s)	830, 947
MmeI	TCCRAC	1 cut(s)	595
Mox20I	TGGCCA	1 cut(s)	1147
Mph1103I	ATGCAT	3 cut(s)	666, 1160, 1519
MroI	TCCGGA	1 cut(s)	979
MroNI	GCCGGC	2 cut(s)	39, 167
MscI	TGGCCA	1 cut(s)	1147
MseI	TTAA	5 cut(s)	246, 356, 756, 1401, 1559
MslI	CAYNNNNRTG	5 cut(s)	492, 1218, 1428, 1592, 2009
Msp20I	TGGCCA	1 cut(s)	1147
MspI	CCGG	4 cut(s)	40, 168, 980, 1414
MspR9I	CCNGG	4 cut(s)	1136, 1488, 1533, 1776
Mva1269I	GAATGC	4 cut(s)	471, 678, 1032, 2004
MvaI	CCWGG	4 cut(s)	1136, 1488, 1533, 1776
NaeI	GCCGGC	2 cut(s)	41, 169
NarI	GGCGCC	2 cut(s)	132, 165
NcoI	CCATGG	1 cut(s)	2092
NdeI	CATATG	2 cut(s)	1261, 1335
NdeII	GATC	5 cut(s)	403, 559, 1102, 1799, 2034
NgoMIV	GCCGGC	2 cut(s)	39, 167
NlaIV	GGNNCC	4 cut(s)	133, 166, 269, 1540
NmeAIII	GCCGAG	1 cut(s)	73
NmuCI	GTSAC	4 cut(s)	365, 939, 1198, 2018
NsiI	ATGCAT	3 cut(s)	666, 1160, 1519
NspI	RCATGY	4 cut(s)	668, 707, 1158, 1427
NspV	TTCGAA	1 cut(s)	138
PaeI	GCATGC	1 cut(s)	668
PagI	TCATGA	1 cut(s)	487
PaqCI	CACCTGC	1 cut(s)	1634
PciI	ACATGT	1 cut(s)	1423
PciSI	GCTCTTC	2 cut(s)	1868, 1997
PcsI	WCGNNNNNNNCGW	4 cut(s)	78, 93, 105, 114
PctI	GAATGC	4 cut(s)	471, 678, 1032, 2004
PdiI	GCCGGC	2 cut(s)	41, 169
PfeI	GAWTC	1 cut(s)	929
PflFI	GACNNNGTC	1 cut(s)	1488
PflMI	CCANNNNNTGG	2 cut(s)	1664, 2093
PinAI	ACCGGT	1 cut(s)	1413
PkrI	GCNGC	6 cut(s)	173, 949, 990, 1381, 1586, 1769
PleI	GAGTC	2 cut(s)	830, 946
PluTI	GGCGCC	2 cut(s)	135, 168
PpsI	GAGTC	2 cut(s)	830, 946
PscI	ACATGT	1 cut(s)	1423
Psp124BI	GAGCTC	2 cut(s)	17, 156
Psp6I	CCWGG	4 cut(s)	1134, 1486, 1531, 1774
PspGI	CCWGG	4 cut(s)	1134, 1486, 1531, 1774
PspN4I	GGNNCC	4 cut(s)	133, 166, 269, 1540
PstI	CTGCAG	1 cut(s)	2127
PstNI	CAGNNNCTG	1 cut(s)	281
PsyI	GACNNNGTC	1 cut(s)	1488
RsaI	GTAC	5 cut(s)	77, 628, 1692, 1782, 1853
RsaNI	GTAC	5 cut(s)	76, 627, 1691, 1781, 1852
RseI	CAYNNNNRTG	5 cut(s)	492, 1218, 1428, 1592, 2009
SacI	GAGCTC	2 cut(s)	17, 156
SalI	GTCGAC	1 cut(s)	56
SapI	GCTCTTC	2 cut(s)	1868, 1997
SaqAI	TTAA	5 cut(s)	246, 356, 756, 1401, 1559
SatI	GCNGC	6 cut(s)	172, 948, 989, 1380, 1585, 1768
Sau3AI	GATC	5 cut(s)	403, 559, 1102, 1799, 2034
SchI	GAGTC	2 cut(s)	830, 947
ScrFI	CCNGG	4 cut(s)	1136, 1488, 1533, 1776
SduI	GDGCHC	8 cut(s)	17, 66, 156, 823, 1051, 1333, 1938, 1992
SexAI	ACCWGGT	2 cut(s)	1134, 1486
SfaNI	GCATC	9 cut(s)	862, 913, 975, 1504, 1526, 1596, 1752, 1948, 2038
SfcI	CTRYAG	1 cut(s)	2123
SfoI	GGCGCC	2 cut(s)	133, 166
SfuI	TTCGAA	1 cut(s)	138
SgrDI	CGTCGACG	1 cut(s)	56
SinI	GGWCC	4 cut(s)	22, 1411, 1490, 1538
SmiI	ATTTAAAT	1 cut(s)	1560
SmiMI	CAYNNNNRTG	5 cut(s)	492, 1218, 1428, 1592, 2009
SmlI	CTYRAG	1 cut(s)	911
SmoI	CTYRAG	1 cut(s)	911
SpeI	ACTAGT	1 cut(s)	1282
SphI	GCATGC	1 cut(s)	668
Sse9I	AATT	7 cut(s)	827, 1181, 1398, 1555, 1561, 1569, 1638
SsiI	CCGC	9 cut(s)	43, 265, 883, 962, 1360, 1380, 1536, 1585, 1913
SspDI	GGCGCC	2 cut(s)	131, 164
SspI	AATATT	2 cut(s)	699, 1923
SspMI	CTAG	5 cut(s)	684, 798, 1176, 1283, 1730
SstI	GAGCTC	2 cut(s)	17, 156
StyD4I	CCNGG	4 cut(s)	1134, 1486, 1531, 1774
StyI	CCWWGG	3 cut(s)	683, 1996, 2092
SwaI	ATTTAAAT	1 cut(s)	1560
TaaI	ACNGT	5 cut(s)	7, 125, 262, 1195, 1672
TaiI	ACGT	5 cut(s)	57, 90, 367, 1722, 1859
TaqI	TCGA	4 cut(s)	57, 72, 108, 138
TaqII	GACCGA	1 cut(s)	384
TasI	AATT	7 cut(s)	827, 1181, 1398, 1555, 1561, 1569, 1638
TatI	WGTACW	2 cut(s)	75, 1851
TauI	GCSGC	2 cut(s)	1382, 1587
TfiI	GAWTC	1 cut(s)	929
Tru1I	TTAA	5 cut(s)	246, 356, 756, 1401, 1559
Tru9I	TTAA	5 cut(s)	246, 356, 756, 1401, 1559
TscAI	CASTG	6 cut(s)	24, 752, 766, 828, 1207, 1516
TseFI	GTSAC	4 cut(s)	365, 939, 1198, 2018
TseI	GCWGC	4 cut(s)	171, 947, 988, 1767
Tsp45I	GTSAC	4 cut(s)	365, 939, 1198, 2018
TspDTI	ATGAA	7 cut(s)	42, 317, 504, 907, 1097, 1098, 1208
TspGWI	ACGGA	5 cut(s)	190, 512, 857, 1667, 1708
TspRI	CASTG	6 cut(s)	24, 752, 766, 828, 1207, 1516
Tth111I	GACNNNGTC	1 cut(s)	1488
Van91I	CCANNNNNTGG	2 cut(s)	1664, 2093
VpaK11BI	GGWCC	4 cut(s)	22, 1411, 1490, 1538
XapI	RAATTY	4 cut(s)	827, 1181, 1555, 1561
XceI	RCATGY	4 cut(s)	668, 707, 1158, 1427
XmaJI	CCTAGG	1 cut(s)	683
XmiI	GTMKAC	1 cut(s)	57
XspI	CTAG	5 cut(s)	684, 798, 1176, 1283, 1730
ZraI	GACGTC	1 cut(s)	55
Zsp2I	ATGCAT	3 cut(s)	666, 1160, 1519

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.