Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0012968

Physical Location & Seq

Genomic Coordinates Reverse (-)

56437764 .. 56443695

Gene Structure 5932 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000034878

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1560 bp

ATGGACTCGTGGCTTAAGTTTAATTTGGTCAAATTGGTGTGCAGAGGGCATTTCCATTTGGTTTGTAGTACGTTAACCGAAAAGTTTGGGAAGCATGGTTTGGTTAAAGCCAAACCGACTATGCGGAGTCTTGCGGCGCCAGTGAGAATGGATGAGGGGGAAGCACCAAAGAAGAAGCAGGAGTTGATTGATGGCCCGGTGCTGACTGAACGTGATCGGGCGACGCTAGATAGGCGAAAGAGGAAGGATGAGCGCCAAAGAGAGCAACAATATCAAATGCATTTAGCAGAAATGGAAGCACCTAGGGCAGGAATGCCTGTTGTCACTGTAAATCATGATGGTGGTGGTCGCTCAAATGTCAAGGATCTCCATCTGGAAGGCTTCAATGTTTCTGTGGGTGGACGTGATCTAATTGTGGATGGTGCGGTAACACTTTCTTTTGGAAGGCATTATGGACTTATTGGAAGAAATGGTACTGGAAAAACAACGTTTCTTAGGCACTTGGCTATGCATGCCATTGATGGCATTCCTAACAGCTGCCAAATATTGCACCCAGCTCGTCTCCTTGCTCAACAGAGAGAACTGGAGCTGGATGAAGAAGCGGGAAAGAGCAGTGGAGAAATTGACAAAGATGCCATTGGACTGAGGCTTCAGGAGGTATACAAGAGGCTTGAGTTCATCGATGCTGATTCTGCAGAGTCACGTGCAGCTTCCATTATTGCGGGTCTTAGTTTCTCTCCTGAGATGCAGCGAAAAGCAACTAAAACATTTTCTGGAGGATGGAGAATGAGAATAGCTCTTGCTCGTGCCCTCTTTATAGAGCCTGACTTGTTACTGCTTGATGAACCTACAAACCATCTTGATCTTCATGCTGTCCTTTGGCTAGAGGCTTACCTGGTGAAGTGGCCAAAAACATGTATCATTGTTTCTCATGCTAGACAATTCTTGAACTCGGTGGTAACTGATATCCTTCATCTTCATGGGCAAAAGTTGACTGCTTACAAAGGTGACTATGATACATATGAGAGGACAAGAGTGGAACAGCTCAAGAACCAACAGAAAGCATTTGAATCTAACGAGCGTTCAAGAAATCATATGCAGGCTTTCATCGATAAGTTTCGCTATAATGCCAAGAGGGCCGCTCTCGTGCAATCAAGAATTAAGGCATTGGACCGGTTGGGACATGTGGATGAAATTGTAAATGACCCTGACTATAAATTTGAATTCCCAACTCCAGACGACAGACCTGGTGCTCCTACAATAAGTTTCAGTATTTGCAGTGATGCATCATTTGGTTATCCTGGTGGACCCCTTTTGTTTAAGAATTTAAATTTTGGAATTGACCTAGACAGCCGCATTGCAATGGTTGGGCCAAATGGCATCGGGAAATCAACTATATTGAAGCTAATTGCAGGAGAGCTGCAACCAACCTCTGGGACAGTTTTCCGGTCAGCTAAGACAAGGATTCTGATTGACACAACAGTCTCGGGAATGTACCTAGTGTTTGTTTTGGTGGCTTGTCAGTTGCCTTACTTCTATAGTTTGTTGGGATTTACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0010035 GO:0010038 GO:0042221 GO:0042742 GO:0043207 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0050896 GO:0051704 GO:0051707 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC_tran ABC_tran_Xtn

Protein Analysis

520

Amino Acids

58.2

Weight (kDa)

8.99

Isoelectric Point (pI)

36.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	143 - 285	2.1e-17	ABC transporter
ABC_tran_Xtn	PF12848	324 - 404	2.9e-24	ABC transporter
ABC_tran	PF00005	440 - 482	6.9e-11	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012968)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64550
fragaria_vesca	FvH4_5g11480 FvH4_5g11480
malus_domestica	MD06G1113200.v1.1 MD14G1134300.v1.1
prunus_persica	Prupe.5G126100_v2.0.a1 Prupe.5G126100_v2.0.a1
pyrus_communis	pycom06g10590
rosa_chinensis	RchiOBHm_Chr7g0186321
rosa_laevigata	RLG00000004849 RLG00000034878
rosa_multiflora	Rmu_sc0000645.1_g000050
rosa_roxburghii	Rroxscaffold_3G00268220
rosa_rugosa	Rorug06G0473500
rosa_samantha	Rh7AG067700 Rh7BG083500 Rh7CG080300
rosa_wichuraiana	Rw7G006730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1481
AccB1I	GGYRCC	1 cut(s)	136
AccB7I	CCANNNNNTGG	1 cut(s)	1433
AccBSI	CCGCTC	1 cut(s)	1142
AccI	GTMKAC	1 cut(s)	660
AciI	CCGC	7 cut(s)	124, 134, 425, 602, 722, 1140, 1354
AclI	AACGTT	1 cut(s)	488
AclWI	GGATC	1 cut(s)	372
AcoI	YGGCCR	1 cut(s)	905
AcsI	RAATTY	4 cut(s)	1217, 1223, 1324, 1330
AcuI	CTGAAG	1 cut(s)	635
AcvI	CACGTG	1 cut(s)	704
AcyI	GRCGYC	1 cut(s)	137
AfaI	GTAC	3 cut(s)	70, 475, 1496
AfiI	CCNNNNNNNGG	2 cut(s)	308, 1433
AflII	CTTAAG	1 cut(s)	14
AflIII	ACRYGT	2 cut(s)	914, 1183
AgeI	ACCGGT	1 cut(s)	1173
AgsI	TTSAA	6 cut(s)	385, 949, 1070, 1086, 1223, 1402
AjiI	CACGTC	1 cut(s)	404
AjnI	CCWGG	3 cut(s)	894, 1246, 1300
AjuI	GAANNNNNNNTTGG	2 cut(s)	83, 115
AluBI	AGCT	9 cut(s)	537, 557, 589, 710, 797, 1045, 1405, 1420, 1454
AluI	AGCT	9 cut(s)	537, 557, 589, 710, 797, 1045, 1405, 1420, 1454
Alw21I	GWGCWC	1 cut(s)	1255
Alw26I	GTCTC	2 cut(s)	566, 1489
AlwI	GGATC	1 cut(s)	372
Ama87I	CYCGRG	1 cut(s)	1486
AoxI	GGCC	4 cut(s)	193, 905, 1137, 1370
ApeKI	GCWGC	4 cut(s)	537, 707, 748, 1420
ApoI	RAATTY	4 cut(s)	1217, 1223, 1324, 1330
ArsI	GACNNNNNNTTYG	2 cut(s)	1202, 1234
AsiGI	ACCGGT	1 cut(s)	1173
AspA2I	CCTAGG	1 cut(s)	302
AspLEI	GCGC	2 cut(s)	139, 255
AspS9I	GGNCC	5 cut(s)	194, 1137, 1171, 1307, 1370
AsuC2I	CCSGG	1 cut(s)	197
AsuHPI	GGTGA	2 cut(s)	910, 1019
AvaI	CYCGRG	1 cut(s)	1486
AvaII	GGWCC	2 cut(s)	1171, 1307
AvrII	CCTAGG	1 cut(s)	302
BaeGI	GKGCMC	1 cut(s)	811
BalI	TGGCCA	1 cut(s)	907
BanI	GGYRCC	1 cut(s)	136
BarI	GAAGNNNNNNTAC	2 cut(s)	457, 489
BauI	CACGAG	3 cut(s)	7, 804, 1145
BbrPI	CACGTG	1 cut(s)	704
Bbv12I	GWGCWC	1 cut(s)	1255
BbvI	GCAGC	4 cut(s)	524, 719, 760, 1407
BccI	CCATC	7 cut(s)	185, 332, 378, 413, 515, 774, 864
BcgI	CGANNNNNNTGC	2 cut(s)	539, 573
BciT130I	CCWGG	3 cut(s)	896, 1248, 1302
BcnI	CCSGG	1 cut(s)	197
BcoDI	GTCTC	2 cut(s)	566, 1489
BfaI	CTAG	6 cut(s)	227, 303, 884, 936, 1346, 1499
BfmI	CTRYAG	2 cut(s)	693, 1537
BfoI	RGCGCY	2 cut(s)	140, 256
BfrI	CTTAAG	1 cut(s)	14
BglI	GCCNNNNNGGC	1 cut(s)	1136
BisI	GCNGC	7 cut(s)	135, 538, 708, 749, 1140, 1354, 1421
BlnI	CCTAGG	1 cut(s)	302
BlsI	GCNGC	7 cut(s)	136, 539, 709, 750, 1141, 1355, 1422
Bme1390I	CCNGG	4 cut(s)	197, 896, 1248, 1302
Bme18I	GGWCC	2 cut(s)	1171, 1307
BmeT110I	CYCGRG	1 cut(s)	1486
BmgBI	CACGTC	1 cut(s)	404
BmgT120I	GGNCC	5 cut(s)	194, 1137, 1171, 1307, 1370
BmiI	GGNNCC	2 cut(s)	138, 1309
BmrFI	CCNGG	4 cut(s)	197, 896, 1248, 1302
BmsI	GCATC	6 cut(s)	622, 673, 735, 1273, 1295, 1389
BplI	GAGNNNNNCTC	4 cut(s)	781, 813, 1126, 1158
BpmI	CTGGAG	3 cut(s)	605, 795, 1218
BpuEI	CTTGAG	2 cut(s)	692, 1031
BpuMI	CCSGG	1 cut(s)	197
Bsa29I	ATCGAT	2 cut(s)	681, 1110
BsaAI	YACGTR	1 cut(s)	704
BsaBI	GATNNNNATC	1 cut(s)	369
BsaHI	GRCGYC	1 cut(s)	137
BsaJI	CCNNGG	1 cut(s)	302
BsaWI	WCCGGW	2 cut(s)	1173, 1446
Bsc4I	CCNNNNNNNGG	2 cut(s)	308, 1433
Bse118I	RCCGGY	1 cut(s)	1173
Bse1I	ACTGG	3 cut(s)	140, 481, 588
Bse3DI	GCAATG	2 cut(s)	1356, 1368
Bse8I	GATNNNNATC	1 cut(s)	369
BseBI	CCWGG	3 cut(s)	896, 1248, 1302
BseCI	ATCGAT	2 cut(s)	681, 1110
BseDI	CCNNGG	1 cut(s)	302
BseGI	GGATG	6 cut(s)	157, 253, 424, 598, 785, 1195
BseJI	GATNNNNATC	1 cut(s)	369
BseLI	CCNNNNNNNGG	2 cut(s)	308, 1433
BseMI	GCAATG	2 cut(s)	1356, 1368
BseMII	CTCAG	2 cut(s)	635, 732
BseNI	ACTGG	3 cut(s)	140, 481, 588
BseSI	GKGCMC	1 cut(s)	811
BseXI	GCAGC	4 cut(s)	524, 719, 760, 1407
BseYI	CCCAGC	1 cut(s)	553
BsgI	GTGCAG	2 cut(s)	61, 726
BshFI	GGCC	4 cut(s)	195, 907, 1139, 1372
BshNI	GGYRCC	1 cut(s)	136
BshTI	ACCGGT	1 cut(s)	1173
BshVI	ATCGAT	2 cut(s)	681, 1110
BsiHKAI	GWGCWC	1 cut(s)	1255
BsiHKCI	CYCGRG	1 cut(s)	1486
BsiSI	CCGG	3 cut(s)	197, 1174, 1447
BslFI	GGGAC	2 cut(s)	1194, 1450
BslI	CCNNNNNNNGG	2 cut(s)	308, 1433
BsmAI	GTCTC	2 cut(s)	566, 1489
BsmBI	CGTCTC	1 cut(s)	566
BsmFI	GGGAC	2 cut(s)	1194, 1450
BsmI	GAATGC	2 cut(s)	318, 525
BsnI	GGCC	4 cut(s)	195, 907, 1139, 1372
BsoBI	CYCGRG	1 cut(s)	1486
Bsp1286I	GDGCHC	2 cut(s)	811, 1255
Bsp143I	GATC	4 cut(s)	214, 364, 406, 862
BspACI	CCGC	7 cut(s)	124, 134, 425, 602, 722, 1140, 1354
BspANI	GGCC	4 cut(s)	195, 907, 1139, 1372
BspCNI	CTCAG	2 cut(s)	636, 733
BspDI	ATCGAT	2 cut(s)	681, 1110
BspHI	TCATGA	1 cut(s)	334
BspLI	GGNNCC	2 cut(s)	138, 1309
BspMAI	CTGCAG	1 cut(s)	697
BspPI	GGATC	1 cut(s)	372
BspT107I	GGYRCC	1 cut(s)	136
BspTI	CTTAAG	1 cut(s)	14
BsrBI	CCGCTC	1 cut(s)	1142
BsrDI	GCAATG	2 cut(s)	1356, 1368
BsrFI	RCCGGY	1 cut(s)	1173
BsrI	ACTGG	3 cut(s)	140, 481, 588
BssAI	RCCGGY	1 cut(s)	1173
BssECI	CCNNGG	1 cut(s)	302
BssMI	GATC	4 cut(s)	214, 364, 406, 862
BssNAI	GTATAC	1 cut(s)	661
BssNI	GRCGYC	1 cut(s)	137
BssSI	CACGAG	3 cut(s)	7, 804, 1145
BssT1I	CCWWGG	1 cut(s)	302
Bst1107I	GTATAC	1 cut(s)	661
Bst2BI	CACGAG	3 cut(s)	7, 804, 1145
Bst2UI	CCWGG	3 cut(s)	896, 1248, 1302
Bst4CI	ACNGT	3 cut(s)	328, 1441, 1483
BstACI	GRCGYC	1 cut(s)	137
BstAFI	CTTAAG	1 cut(s)	14
BstBAI	YACGTR	1 cut(s)	704
BstC8I	GCNNGC	2 cut(s)	513, 1101
BstDEI	CTNAG	5 cut(s)	494, 644, 728, 741, 1455
BstENI	CCTNNNNNAGG	1 cut(s)	306
BstF5I	GGATG	6 cut(s)	157, 253, 424, 598, 785, 1195
BstH2I	RGCGCY	2 cut(s)	140, 256
BstHHI	GCGC	2 cut(s)	139, 255
BstKTI	GATC	4 cut(s)	217, 367, 409, 865
BstMAI	GTCTC	2 cut(s)	566, 1489
BstMBI	GATC	4 cut(s)	214, 364, 406, 862
BstMWI	GCNNNNNNNGC	5 cut(s)	232, 305, 512, 692, 1136
BstNI	CCWGG	3 cut(s)	896, 1248, 1302
BstNSI	RCATGY	3 cut(s)	515, 918, 1187
BstSCI	CCNGG	4 cut(s)	195, 894, 1246, 1300
BstSFI	CTRYAG	2 cut(s)	693, 1537
BstSLI	GKGCMC	1 cut(s)	811
BstV1I	GCAGC	4 cut(s)	524, 719, 760, 1407
BstX2I	RGATCY	1 cut(s)	364
BstYI	RGATCY	1 cut(s)	364
BstZ17I	GTATAC	1 cut(s)	661
Bsu15I	ATCGAT	2 cut(s)	681, 1110
BsuRI	GGCC	4 cut(s)	195, 907, 1139, 1372
BsuTUI	ATCGAT	2 cut(s)	681, 1110
BtrI	CACGTC	1 cut(s)	404
BtsCI	GGATG	6 cut(s)	157, 253, 424, 598, 785, 1195
BtsI	GCAGTG	2 cut(s)	619, 1285
BtsIMutI	CAGTG	4 cut(s)	147, 324, 619, 1285
Cac8I	GCNNGC	2 cut(s)	513, 1101
CciI	TCATGA	1 cut(s)	334
CfoI	GCGC	2 cut(s)	139, 255
Cfr10I	RCCGGY	1 cut(s)	1173
Cfr13I	GGNCC	5 cut(s)	194, 1137, 1171, 1307, 1370
ClaI	ATCGAT	2 cut(s)	681, 1110
CseI	GACGC	1 cut(s)	232
CsiI	ACCWGGT	2 cut(s)	894, 1246
Csp6I	GTAC	3 cut(s)	69, 474, 1495
CspAI	ACCGGT	1 cut(s)	1173
CviAII	CATG	8 cut(s)	95, 335, 512, 869, 915, 932, 980, 1184
CviQI	GTAC	3 cut(s)	69, 474, 1495
DdeI	CTNAG	5 cut(s)	494, 644, 728, 741, 1455
DinI	GGCGCC	1 cut(s)	138
DpnI	GATC	4 cut(s)	216, 366, 408, 864
DpnII	GATC	4 cut(s)	214, 364, 406, 862
DraI	TTTAAA	1 cut(s)	1329
DrdI	GACNNNNNNGTC	1 cut(s)	1481
DseDI	GACNNNNNNGTC	1 cut(s)	1481
EaeI	YGGCCR	1 cut(s)	905
Eco130I	CCWWGG	1 cut(s)	302
Eco32I	GATATC	1 cut(s)	967
Eco47I	GGWCC	2 cut(s)	1171, 1307
Eco57I	CTGAAG	1 cut(s)	635
Eco72I	CACGTG	1 cut(s)	704
Eco88I	CYCGRG	1 cut(s)	1486
EcoNI	CCTNNNNNAGG	1 cut(s)	306
EcoRI	GAATTC	1 cut(s)	1223
EcoRII	CCWGG	3 cut(s)	894, 1246, 1300
EcoRV	GATATC	1 cut(s)	967
EcoT14I	CCWWGG	1 cut(s)	302
EcoT22I	ATGCAT	3 cut(s)	282, 513, 1288
EgeI	GGCGCC	1 cut(s)	138
EheI	GGCGCC	1 cut(s)	138
ErhI	CCWWGG	1 cut(s)	302
Esp3I	CGTCTC	1 cut(s)	566
FaeI	CATG	8 cut(s)	98, 338, 515, 872, 918, 935, 983, 1187
FaqI	GGGAC	2 cut(s)	1194, 1450
FatI	CATG	8 cut(s)	94, 334, 511, 868, 914, 931, 979, 1183
FauI	CCCGC	2 cut(s)	595, 715
FauNDI	CATATG	2 cut(s)	1021, 1095
FblI	GTMKAC	1 cut(s)	660
Fnu4HI	GCNGC	7 cut(s)	135, 538, 708, 749, 1140, 1354, 1421
FokI	GGATG	6 cut(s)	164, 260, 431, 605, 792, 1202
Fsp4HI	GCNGC	7 cut(s)	135, 538, 708, 749, 1140, 1354, 1421
FspBI	CTAG	6 cut(s)	227, 303, 884, 936, 1346, 1499
GlaI	GCGC	2 cut(s)	138, 254
GluI	GCNGC	7 cut(s)	135, 538, 708, 749, 1140, 1354, 1421
GsaI	CCCAGC	1 cut(s)	557
GsuI	CTGGAG	3 cut(s)	605, 795, 1218
HaeII	RGCGCY	2 cut(s)	140, 256
HaeIII	GGCC	4 cut(s)	195, 907, 1139, 1372
HapII	CCGG	3 cut(s)	197, 1174, 1447
HgaI	GACGC	1 cut(s)	232
HhaI	GCGC	2 cut(s)	139, 255
Hin1I	GRCGYC	1 cut(s)	137
Hin1II	CATG	8 cut(s)	98, 338, 515, 872, 918, 935, 983, 1187
Hin6I	GCGC	2 cut(s)	137, 253
HinP1I	GCGC	2 cut(s)	137, 253
HincII	GTYRAC	2 cut(s)	75, 993
HindII	GTYRAC	2 cut(s)	75, 993
HinfI	GANTC	6 cut(s)	5, 127, 689, 698, 1070, 1465
HpaI	GTTAAC	1 cut(s)	75
HpaII	CCGG	3 cut(s)	197, 1174, 1447
HphI	GGTGA	2 cut(s)	910, 1019
Hpy166II	GTNNAC	5 cut(s)	75, 401, 661, 993, 1307
Hpy188I	TCNGA	1 cut(s)	1470
Hpy8I	GTNNAC	5 cut(s)	75, 401, 661, 993, 1307
Hpy99I	CGWCG	1 cut(s)	226
HpyAV	CCTTC	4 cut(s)	238, 371, 438, 980
HpyCH4III	ACNGT	3 cut(s)	328, 1441, 1483
HpyCH4IV	ACGT	5 cut(s)	71, 211, 403, 488, 703
HpyF10VI	GCNNNNNNNGC	5 cut(s)	232, 305, 512, 692, 1136
HpyF3I	CTNAG	5 cut(s)	494, 644, 728, 741, 1455
HpySE526I	ACGT	5 cut(s)	71, 211, 403, 488, 703
Hsp92I	GRCGYC	1 cut(s)	137
Hsp92II	CATG	8 cut(s)	98, 338, 515, 872, 918, 935, 983, 1187
HspAI	GCGC	2 cut(s)	137, 253
KasI	GGCGCC	1 cut(s)	136
KspAI	GTTAAC	1 cut(s)	75
Kzo9I	GATC	4 cut(s)	214, 364, 406, 862
LmnI	GCTCC	2 cut(s)	586, 1258
Lsp1109I	GCAGC	4 cut(s)	524, 719, 760, 1407
LweI	GCATC	6 cut(s)	622, 673, 735, 1273, 1295, 1389
MabI	ACCWGGT	2 cut(s)	894, 1246
MaeI	CTAG	6 cut(s)	227, 303, 884, 936, 1346, 1499
MaeII	ACGT	5 cut(s)	71, 211, 403, 488, 703
MaeIII	GTNAC	6 cut(s)	322, 427, 699, 831, 958, 1007
MalI	GATC	4 cut(s)	216, 366, 408, 864
MbiI	CCGCTC	1 cut(s)	1142
MboI	GATC	4 cut(s)	214, 364, 406, 862
MboII	GAAGA	5 cut(s)	184, 477, 608, 857, 968
MflI	RGATCY	1 cut(s)	364
MhlI	GDGCHC	2 cut(s)	811, 1255
MlsI	TGGCCA	1 cut(s)	907
MluNI	TGGCCA	1 cut(s)	907
Mly113I	GGCGCC	1 cut(s)	137
MlyI	GAGTC	2 cut(s)	136, 707
Mox20I	TGGCCA	1 cut(s)	907
Mph1103I	ATGCAT	3 cut(s)	282, 513, 1288
MscI	TGGCCA	1 cut(s)	907
MseI	TTAA	7 cut(s)	15, 21, 74, 105, 1161, 1320, 1328
MslI	CAYNNNNRTG	4 cut(s)	339, 978, 1188, 1361
Msp20I	TGGCCA	1 cut(s)	907
MspA1I	CMGCKG	1 cut(s)	537
MspCI	CTTAAG	1 cut(s)	14
MspI	CCGG	3 cut(s)	197, 1174, 1447
MspR9I	CCNGG	4 cut(s)	197, 896, 1248, 1302
Mva1269I	GAATGC	2 cut(s)	318, 525
MvaI	CCWGG	3 cut(s)	896, 1248, 1302
MwoI	GCNNNNNNNGC	5 cut(s)	232, 305, 512, 692, 1136
NarI	GGCGCC	1 cut(s)	137
NciI	CCSGG	1 cut(s)	197
NdeI	CATATG	2 cut(s)	1021, 1095
NdeII	GATC	4 cut(s)	214, 364, 406, 862
NlaIII	CATG	8 cut(s)	98, 338, 515, 872, 918, 935, 983, 1187
NlaIV	GGNNCC	2 cut(s)	138, 1309
NmuCI	GTSAC	3 cut(s)	322, 699, 1007
NsiI	ATGCAT	3 cut(s)	282, 513, 1288
NspI	RCATGY	3 cut(s)	515, 918, 1187
PaeI	GCATGC	1 cut(s)	515
PagI	TCATGA	1 cut(s)	334
PciI	ACATGT	2 cut(s)	914, 1183
PctI	GAATGC	2 cut(s)	318, 525
PfeI	GAWTC	3 cut(s)	689, 1070, 1465
PflMI	CCANNNNNTGG	1 cut(s)	1433
PinAI	ACCGGT	1 cut(s)	1173
PkrI	GCNGC	7 cut(s)	136, 539, 709, 750, 1141, 1355, 1422
PleI	GAGTC	2 cut(s)	135, 706
PluTI	GGCGCC	1 cut(s)	140
PmaCI	CACGTG	1 cut(s)	704
PmlI	CACGTG	1 cut(s)	704
PpsI	GAGTC	2 cut(s)	135, 706
Ppu21I	YACGTR	1 cut(s)	704
PscI	ACATGT	2 cut(s)	914, 1183
Psp1406I	AACGTT	1 cut(s)	488
Psp6I	CCWGG	3 cut(s)	894, 1246, 1300
PspCI	CACGTG	1 cut(s)	704
PspFI	CCCAGC	1 cut(s)	553
PspGI	CCWGG	3 cut(s)	894, 1246, 1300
PspN4I	GGNNCC	2 cut(s)	138, 1309
PspPI	GGNCC	5 cut(s)	194, 1137, 1171, 1307, 1370
PstI	CTGCAG	1 cut(s)	697
PsuI	RGATCY	1 cut(s)	364
PvuII	CAGCTG	1 cut(s)	537
RsaI	GTAC	3 cut(s)	70, 475, 1496
RsaNI	GTAC	3 cut(s)	69, 474, 1495
RseI	CAYNNNNRTG	4 cut(s)	339, 978, 1188, 1361
SaqAI	TTAA	7 cut(s)	15, 21, 74, 105, 1161, 1320, 1328
SatI	GCNGC	7 cut(s)	135, 538, 708, 749, 1140, 1354, 1421
Sau3AI	GATC	4 cut(s)	214, 364, 406, 862
Sau96I	GGNCC	5 cut(s)	194, 1137, 1171, 1307, 1370
SchI	GAGTC	2 cut(s)	136, 707
ScrFI	CCNGG	4 cut(s)	197, 896, 1248, 1302
SduI	GDGCHC	2 cut(s)	811, 1255
SexAI	ACCWGGT	2 cut(s)	894, 1246
SfaNI	GCATC	6 cut(s)	622, 673, 735, 1273, 1295, 1389
SfcI	CTRYAG	2 cut(s)	693, 1537
SfoI	GGCGCC	1 cut(s)	138
SinI	GGWCC	2 cut(s)	1171, 1307
SmiI	ATTTAAAT	1 cut(s)	1329
SmiMI	CAYNNNNRTG	4 cut(s)	339, 978, 1188, 1361
SmlI	CTYRAG	3 cut(s)	14, 671, 1046
SmoI	CTYRAG	3 cut(s)	14, 671, 1046
SphI	GCATGC	1 cut(s)	515
SsiI	CCGC	7 cut(s)	124, 134, 425, 602, 722, 1140, 1354
SspDI	GGCGCC	1 cut(s)	136
SspI	AATATT	1 cut(s)	546
SspMI	CTAG	6 cut(s)	227, 303, 884, 936, 1346, 1499
StyD4I	CCNGG	4 cut(s)	195, 894, 1246, 1300
StyI	CCWWGG	1 cut(s)	302
SwaI	ATTTAAAT	1 cut(s)	1329
TaaI	ACNGT	3 cut(s)	328, 1441, 1483
TaiI	ACGT	5 cut(s)	74, 214, 406, 491, 706
TaqI	TCGA	2 cut(s)	681, 1110
TauI	GCSGC	3 cut(s)	137, 1142, 1356
TfiI	GAWTC	3 cut(s)	689, 1070, 1465
Tru1I	TTAA	7 cut(s)	15, 21, 74, 105, 1161, 1320, 1328
Tru9I	TTAA	7 cut(s)	15, 21, 74, 105, 1161, 1320, 1328
TscAI	CASTG	4 cut(s)	147, 331, 619, 1285
TseFI	GTSAC	3 cut(s)	322, 699, 1007
TseI	GCWGC	4 cut(s)	537, 707, 748, 1420
Tsp45I	GTSAC	3 cut(s)	322, 699, 1007
TspDTI	ATGAA	8 cut(s)	609, 667, 857, 858, 962, 968, 1096, 1206
TspRI	CASTG	4 cut(s)	147, 331, 619, 1285
Van91I	CCANNNNNTGG	1 cut(s)	1433
Vha464I	CTTAAG	1 cut(s)	14
VpaK11BI	GGWCC	2 cut(s)	1171, 1307
XagI	CCTNNNNNAGG	1 cut(s)	306
XapI	RAATTY	4 cut(s)	1217, 1223, 1324, 1330
XceI	RCATGY	3 cut(s)	515, 918, 1187
XmaJI	CCTAGG	1 cut(s)	302
XmiI	GTMKAC	1 cut(s)	660
XspI	CTAG	6 cut(s)	227, 303, 884, 936, 1346, 1499
Zsp2I	ATGCAT	3 cut(s)	282, 513, 1288

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.