Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0012968

Physical Location & Seq

Genomic Coordinates Reverse (-)

63054519 .. 63062252

Gene Structure 7734 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000004849

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2331 bp

ATGACGGCAGTGGCGAGCTCATTGGTCCACGACGTTCTCGGCCGGAGAGCCGACGACGTCGACCGACCTATAATCGACTACATCATCAACGTCCTCGCCGACGAGGACTTCGATTTCGGCGACGACGGAGAAGGCGCCTTTGACGCTCTTGGCGAGCTCCTCGTCGCTGCTGAATGCGTCGCTGACTTCGATGAGTGCCGCTCGGTTTGCAGTACGTTAACCGAAAAGTTTGGGAAGCATGGTTTGGTTAAAGCCAAACCGACCGTGCGGAGTCTTGCGGCGCCAGTGAGAATGGATGATGGAATGGATGAGGGGGAAGCACCAAAGAAGAAGCAGGAGTTGATTGATGGCCCGGTGCTGACTGAACGTGATCGGGCGAAGCTAGATAGGCGAAAGAGGAAGGATGAGCGCCAAAGAGAGCAACAATATCAAATGCATTTAGCAGAAATGGAAGCAGCTAGGGCAGGAATGCCTGTTGTCACTGTAAATCATGATGGTGGTGGTGGCTCAAATGTCAAGGATCTCCATCTGGAAGGCTTCAATGTTTCTGTGGGTGGACGTGATCTAATTGTGGATGGTGCAGTAACACTTTCTTTTGGAAGGCATTATGGACTTATTGGAAGAAATGGTACTGGAAAAACAACGTTTCTTAGGCACTTGGCTATGCATGCCATTGATGGCATTCCTAACAGCTGCCAAATATTGCACGTGGAGCAAGAAGTGGCAGGTGATGATACATCAGCCTTGCAATGTGTTGTTAACACCGATATCGAAAGAAGCCAGCTTTTGGAAGAAGAAGCTCGTCTCCTTGCTCAGCAGAGAGAACTGGAGCTGGATGAAGACACGGGAAAGAGCAATGGAGAAATTGACAAAGATGCTATTGGACTGAGGCTTCAGGAGGTGTACAAGAGGCTTGAGTTCATCGATGCTGATTCTGCAGAGTCACGTGCAGCTTCCATTCTTGCGGGTCTTAGTTTCTCTCCTGAGATGCAGCGAAAAGCAACTAAAACATTTTCTGGAGGATGGAGAATGAGAATAGCTCTTGCTCGTGCCCTCTTTATAGAGCCTGACTTGTTACTGCTTGATGAACCTACAAACCATCTTGATCTTCATGCTGTCCTTTGGCTAGAGGCTTACCTGGTGAAGTGGCCAAAAACATGTATCATTGTTTCTCATGCTAGAGAATTCTTGAACTCGGTGGTAACTGATATCCTTCATCTTCATGGGCAAAAGTTGACTGCTTACAAAGGTGACTATGATACATATGAGAGGACAAGAGTGGAACAGCTCAAGAACCAACAGAAAGCATTTGAATCGAACGAGCGTTCAAGAAATCATATGCAGGCTTTCATCGATAAGTTTCGCTATAATGCCAAGAGGGCCGCTCTCGTGCAATCAAGAATTAAGGCATTGGACCGGTTGGGACATGTGGATGAAATTGTAAATGACCCTGACTATAAATTTGAATTCCCAACTCCAGACGACAGACCTGGTGCTCCTATAATAAGTTTCAGTGATGCATCATTTGGTTATCCTGGTGGACCCCTTTTGTTTAAGAATTTAAATTTTGGAATTGACCTAGACAGCCGCATTGCAATGGTTGGGCCAAATGGCATTGGGAAATCAACTATATTGAAGCTAATTGCAGGAGAGCTGCAACCAACCTCTGGGACAGTTTTCCGGTCAGCTAAGGTTCGTATTGCTGTTTTCAGTCAGCATCACGTTGACGGGCTAGATCTAACTTCCAATCCTCTGTTGTATATGATGCGGTGCTTCCCAGGAGTGCCTGAACAGAAGCTCCGATCTCACTTGGGTTCTTTTGGTGTAACTGGAAATCTCGCGCTGCAGCCAATGTACACTCTGTCTGGTGGTCAGAAGAGCAGAGTTGCATTTGCAAAGATAACTTTCAAGAAGCCACACATAATATTGCTCGATGAGCCCTCCAATCATCTGGATCTGGATGCTGTGGAGGCATTGATTCAAGGTCTTGTTATCTTCCAAGGAGGCATTCTTATGGTTAGTCACGACGAGCATCTGATCTCTGGAAGTGTGGAGGAGCTATGGGTGGTCAGGAAAAAAATGGAAGACGGCAACCCCAACCCCAACCCCAATAACGCCATAATCTCCCGGGAGACGATTGACTCGGTCGCCGGCTGGGTCAGCGCCACCGTCTCCTCCGCCTTCTTCTCCTCCCTCGAGCGCTTCTCCTGCGTCAACGTCGCCACCACGGACGCCGACGAGGACGACGATGACGACCACCGCCCCCTCGCTCTCAGCCCCCCCGAACAACAGCACCACCACGCAAACGACGTCGCTCAGCTCCCCGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0010035 GO:0010038 GO:0042221 GO:0042742 GO:0043207 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0050896 GO:0051704 GO:0051707 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC_tran ABC_tran_Xtn

Protein Analysis

777

Amino Acids

85.86

Weight (kDa)

5.34

Isoelectric Point (pI)

38.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PWI_ABCF3	PF26051	9 - 79	5e-15	ABCF3, PWI-like helical bundle domain
ABC_tran	PF00005	195 - 366	3.2e-18	ABC transporter
ABC_tran_Xtn	PF12848	405 - 485	5.2e-24	ABC transporter
ABC_tran	PF00005	518 - 649	1.1e-22	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012968)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64550
fragaria_vesca	FvH4_5g11480 FvH4_5g11480
malus_domestica	MD06G1113200.v1.1 MD14G1134300.v1.1
prunus_persica	Prupe.5G126100_v2.0.a1 Prupe.5G126100_v2.0.a1
pyrus_communis	pycom06g10590
rosa_chinensis	RchiOBHm_Chr7g0186321
rosa_laevigata	RLG00000004849 RLG00000034878
rosa_multiflora	Rmu_sc0000645.1_g000050
rosa_roxburghii	Rroxscaffold_3G00268220
rosa_rugosa	Rorug06G0473500
rosa_samantha	Rh7AG067700 Rh7BG083500 Rh7CG080300
rosa_wichuraiana	Rw7G006730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	716
AatII	GACGTC	2 cut(s)	60, 2313
Acc36I	ACCTGC	1 cut(s)	716
AccB1I	GGYRCC	2 cut(s)	134, 280
AccB7I	CCANNNNNTGG	2 cut(s)	787, 1667
AccBSI	CCGCTC	2 cut(s)	201, 1385
AccI	GTMKAC	1 cut(s)	60
AccII	CGCG	1 cut(s)	1841
AciI	CCGC	9 cut(s)	199, 268, 278, 965, 1383, 1588, 1768, 2178, 2260
AclI	AACGTT	1 cut(s)	644
AclWI	GGATC	2 cut(s)	528, 1962
AcoI	YGGCCR	2 cut(s)	40, 1148
AcsI	RAATTY	5 cut(s)	1184, 1460, 1466, 1558, 1564
AcuI	CTGAAG	1 cut(s)	878
AcvI	CACGTG	2 cut(s)	709, 947
AcyI	GRCGYC	5 cut(s)	57, 135, 281, 2232, 2310
AfaI	GTAC	4 cut(s)	214, 631, 905, 1856
AfeI	AGCGCT	1 cut(s)	2201
AfiI	CCNNNNNNNGG	2 cut(s)	787, 1667
AflIII	ACRYGT	2 cut(s)	1157, 1426
AgeI	ACCGGT	1 cut(s)	1416
AgsI	TTSAA	8 cut(s)	541, 1192, 1313, 1329, 1466, 1636, 1909, 1982
AjiI	CACGTC	1 cut(s)	560
AjnI	CCWGG	4 cut(s)	1137, 1489, 1534, 1777
AjuI	GAANNNNNNNTTGG	4 cut(s)	227, 259, 1992, 2024
AloI	GAACNNNNNNTCC	2 cut(s)	1782, 1814
Alw21I	GWGCWC	3 cut(s)	20, 159, 1498
Alw26I	GTCTC	3 cut(s)	809, 2126, 2176
AlwI	GGATC	2 cut(s)	528, 1962
Ama87I	CYCGRG	2 cut(s)	2127, 2195
Aor51HI	AGCGCT	1 cut(s)	2201
AoxI	GGCC	5 cut(s)	40, 349, 1148, 1380, 1604
ApeKI	GCWGC	8 cut(s)	167, 455, 693, 950, 991, 1654, 1843, 1846
ApoI	RAATTY	5 cut(s)	1184, 1460, 1466, 1558, 1564
ArsI	GACNNNNNNTTYG	6 cut(s)	92, 98, 124, 130, 1445, 1477
AsiGI	ACCGGT	1 cut(s)	1416
AspLEI	GCGC	6 cut(s)	137, 283, 411, 1843, 2165, 2202
AspS9I	GGNCC	6 cut(s)	25, 350, 1380, 1414, 1541, 1604
AsuC2I	CCSGG	3 cut(s)	353, 2128, 2129
AsuHPI	GGTGA	3 cut(s)	740, 1153, 1262
AvaI	CYCGRG	2 cut(s)	2127, 2195
AvaII	GGWCC	3 cut(s)	25, 1414, 1541
BaeGI	GKGCMC	1 cut(s)	1054
BalI	TGGCCA	1 cut(s)	1150
BanI	GGYRCC	2 cut(s)	134, 280
BanII	GRGCYC	3 cut(s)	20, 159, 1941
BarI	GAAGNNNNNNTAC	2 cut(s)	613, 645
BauI	CACGAG	2 cut(s)	1047, 1388
BbrPI	CACGTG	2 cut(s)	709, 947
BbsI	GAAGAC	2 cut(s)	846, 2091
Bbv12I	GWGCWC	3 cut(s)	20, 159, 1498
BbvI	GCAGC	8 cut(s)	154, 467, 680, 962, 1003, 1641, 1830, 1858
BccI	CCATC	8 cut(s)	293, 341, 488, 534, 569, 671, 1017, 1107
BceAI	ACGGC	2 cut(s)	21, 2104
BcgI	CGANNNNNNTGC	2 cut(s)	1296, 1330
BciT130I	CCWGG	4 cut(s)	1139, 1491, 1536, 1779
BcnI	CCSGG	3 cut(s)	353, 2128, 2129
BcoDI	GTCTC	3 cut(s)	809, 2126, 2176
BfaI	CTAG	6 cut(s)	383, 459, 1127, 1179, 1580, 1733
BfmI	CTRYAG	2 cut(s)	936, 1844
BfoI	RGCGCY	5 cut(s)	138, 284, 412, 2166, 2203
BfuAI	ACCTGC	1 cut(s)	716
BglI	GCCNNNNNGGC	1 cut(s)	1379
BglII	AGATCT	1 cut(s)	1735
BlpI	GCTNAGC	2 cut(s)	813, 2316
Bme1390I	CCNGG	7 cut(s)	353, 1139, 1491, 1536, 1779, 2128, 2129
Bme18I	GGWCC	3 cut(s)	25, 1414, 1541
BmeT110I	CYCGRG	2 cut(s)	2127, 2195
BmgBI	CACGTC	1 cut(s)	560
BmgT120I	GGNCC	6 cut(s)	25, 350, 1380, 1414, 1541, 1604
BmiI	GGNNCC	3 cut(s)	136, 282, 1543
BmrFI	CCNGG	7 cut(s)	353, 1139, 1491, 1536, 1779, 2128, 2129
BmsI	GCATC	9 cut(s)	865, 916, 978, 1507, 1529, 1726, 1755, 1951, 2041
BpiI	GAAGAC	2 cut(s)	846, 2091
BplI	GAGNNNNNCTC	8 cut(s)	185, 217, 1024, 1056, 1369, 1401, 2189, 2221
BpmI	CTGGAG	3 cut(s)	848, 1038, 1461
Bpu10I	CCTNAGC	1 cut(s)	1689
Bpu1102I	GCTNAGC	2 cut(s)	813, 2316
BpuEI	CTTGAG	2 cut(s)	935, 1274
BpuMI	CCSGG	3 cut(s)	353, 2128, 2129
Bsa29I	ATCGAT	2 cut(s)	924, 1353
BsaAI	YACGTR	2 cut(s)	709, 947
BsaBI	GATNNNNATC	1 cut(s)	525
BsaHI	GRCGYC	5 cut(s)	57, 135, 281, 2232, 2310
BsaJI	CCNNGG	4 cut(s)	1777, 1999, 2127, 2226
BsaWI	WCCGGW	2 cut(s)	1416, 1680
BsaXI	ACNNNNNCTCC	2 cut(s)	1782, 1812
Bsc4I	CCNNNNNNNGG	2 cut(s)	787, 1667
Bse118I	RCCGGY	2 cut(s)	1416, 2150
Bse1I	ACTGG	4 cut(s)	284, 637, 831, 1834
Bse3DI	GCAATG	4 cut(s)	755, 862, 1590, 1602
Bse8I	GATNNNNATC	1 cut(s)	525
BseBI	CCWGG	4 cut(s)	1139, 1491, 1536, 1779
BseCI	ATCGAT	2 cut(s)	924, 1353
BseDI	CCNNGG	4 cut(s)	1777, 1999, 2127, 2226
BseGI	GGATG	8 cut(s)	301, 313, 409, 580, 841, 1028, 1438, 1966
BseJI	GATNNNNATC	1 cut(s)	525
BseLI	CCNNNNNNNGG	2 cut(s)	787, 1667
BseMI	GCAATG	4 cut(s)	755, 862, 1590, 1602
BseMII	CTCAG	5 cut(s)	827, 878, 975, 2287, 2330
BseNI	ACTGG	4 cut(s)	284, 637, 831, 1834
BseRI	GAGGAG	4 cut(s)	149, 2069, 2164, 2179
BseSI	GKGCMC	1 cut(s)	1054
BseX3I	CGGCCG	1 cut(s)	40
BseXI	GCAGC	8 cut(s)	154, 467, 680, 962, 1003, 1641, 1830, 1858
BseYI	CCCAGC	1 cut(s)	2154
BsgI	GTGCAG	2 cut(s)	600, 969
Bsh1236I	CGCG	1 cut(s)	1841
Bsh1285I	CGRYCG	4 cut(s)	43, 64, 264, 2148
BshFI	GGCC	5 cut(s)	42, 351, 1150, 1382, 1606
BshNI	GGYRCC	2 cut(s)	134, 280
BshTI	ACCGGT	1 cut(s)	1416
BshVI	ATCGAT	2 cut(s)	924, 1353
BsiEI	CGRYCG	4 cut(s)	43, 64, 264, 2148
BsiHKAI	GWGCWC	3 cut(s)	20, 159, 1498
BsiHKCI	CYCGRG	2 cut(s)	2127, 2195
BsiSI	CCGG	6 cut(s)	43, 353, 1417, 1681, 2128, 2151
BslFI	GGGAC	2 cut(s)	1437, 1684
BslI	CCNNNNNNNGG	2 cut(s)	787, 1667
BsmAI	GTCTC	3 cut(s)	809, 2126, 2176
BsmBI	CGTCTC	3 cut(s)	809, 2126, 2176
BsmFI	GGGAC	2 cut(s)	1437, 1684
BsmI	GAATGC	4 cut(s)	179, 474, 681, 2007
BsnI	GGCC	5 cut(s)	42, 351, 1150, 1382, 1606
BsoBI	CYCGRG	2 cut(s)	2127, 2195
Bsp1286I	GDGCHC	5 cut(s)	20, 159, 1054, 1498, 1941
Bsp1407I	TGTACA	2 cut(s)	903, 1854
Bsp143I	GATC	8 cut(s)	370, 520, 562, 1105, 1735, 1802, 1954, 2037
Bsp1720I	GCTNAGC	2 cut(s)	813, 2316
BspACI	CCGC	9 cut(s)	199, 268, 278, 965, 1383, 1588, 1768, 2178, 2260
BspANI	GGCC	5 cut(s)	42, 351, 1150, 1382, 1606
BspCNI	CTCAG	5 cut(s)	826, 879, 976, 2286, 2329
BspDI	ATCGAT	2 cut(s)	924, 1353
BspFNI	CGCG	1 cut(s)	1841
BspHI	TCATGA	1 cut(s)	490
BspLI	GGNNCC	3 cut(s)	136, 282, 1543
BspMAI	CTGCAG	2 cut(s)	940, 1848
BspMI	ACCTGC	1 cut(s)	716
BspPI	GGATC	2 cut(s)	528, 1962
BspQI	GCTCTTC	1 cut(s)	1871
BspT107I	GGYRCC	2 cut(s)	134, 280
BsrBI	CCGCTC	2 cut(s)	201, 1385
BsrDI	GCAATG	4 cut(s)	755, 862, 1590, 1602
BsrFI	RCCGGY	2 cut(s)	1416, 2150
BsrGI	TGTACA	2 cut(s)	903, 1854
BsrI	ACTGG	4 cut(s)	284, 637, 831, 1834
BssAI	RCCGGY	2 cut(s)	1416, 2150
BssECI	CCNNGG	4 cut(s)	1777, 1999, 2127, 2226
BssMI	GATC	8 cut(s)	370, 520, 562, 1105, 1735, 1802, 1954, 2037
BssNI	GRCGYC	5 cut(s)	57, 135, 281, 2232, 2310
BssSI	CACGAG	2 cut(s)	1047, 1388
BssT1I	CCWWGG	1 cut(s)	1999
Bst2BI	CACGAG	2 cut(s)	1047, 1388
Bst2UI	CCWGG	4 cut(s)	1139, 1491, 1536, 1779
Bst4CI	ACNGT	4 cut(s)	265, 484, 1675, 2170
Bst6I	CTCTTC	1 cut(s)	1871
BstACI	GRCGYC	5 cut(s)	57, 135, 281, 2232, 2310
BstAUI	TGTACA	2 cut(s)	903, 1854
BstBAI	YACGTR	2 cut(s)	709, 947
BstC8I	GCNNGC	6 cut(s)	16, 155, 669, 782, 1344, 2152
BstDEI	CTNAG	8 cut(s)	650, 813, 887, 971, 984, 1689, 2273, 2316
BstDSI	CCRYGG	1 cut(s)	2226
BstF5I	GGATG	8 cut(s)	301, 313, 409, 580, 841, 1028, 1438, 1966
BstFNI	CGCG	1 cut(s)	1841
BstH2I	RGCGCY	5 cut(s)	138, 284, 412, 2166, 2203
BstHHI	GCGC	6 cut(s)	137, 283, 411, 1843, 2165, 2202
BstKTI	GATC	8 cut(s)	373, 523, 565, 1108, 1738, 1805, 1957, 2040
BstMAI	GTCTC	3 cut(s)	809, 2126, 2176
BstMBI	GATC	8 cut(s)	370, 520, 562, 1105, 1735, 1802, 1954, 2037
BstMCI	CGRYCG	4 cut(s)	43, 64, 264, 2148
BstNI	CCWGG	4 cut(s)	1139, 1491, 1536, 1779
BstNSI	RCATGY	3 cut(s)	671, 1161, 1430
BstSCI	CCNGG	7 cut(s)	351, 1137, 1489, 1534, 1777, 2126, 2127
BstSFI	CTRYAG	2 cut(s)	936, 1844
BstSLI	GKGCMC	1 cut(s)	1054
BstUI	CGCG	1 cut(s)	1841
BstV1I	GCAGC	8 cut(s)	154, 467, 680, 962, 1003, 1641, 1830, 1858
BstV2I	GAAGAC	2 cut(s)	846, 2091
BstX2I	RGATCY	3 cut(s)	520, 1735, 1954
BstXI	CCANNNNNNTGG	1 cut(s)	1951
BstYI	RGATCY	3 cut(s)	520, 1735, 1954
BstZI	CGGCCG	1 cut(s)	40
Bsu15I	ATCGAT	2 cut(s)	924, 1353
BsuRI	GGCC	5 cut(s)	42, 351, 1150, 1382, 1606
BsuTUI	ATCGAT	2 cut(s)	924, 1353
BtgI	CCRYGG	1 cut(s)	2226
BtrI	CACGTC	1 cut(s)	560
BtsCI	GGATG	8 cut(s)	301, 313, 409, 580, 841, 1028, 1438, 1966
BtsI	GCAGTG	1 cut(s)	15
BtsIMutI	CAGTG	4 cut(s)	15, 291, 480, 1519
BveI	ACCTGC	1 cut(s)	716
Cac8I	GCNNGC	6 cut(s)	16, 155, 669, 782, 1344, 2152
CciI	TCATGA	1 cut(s)	490
CfoI	GCGC	6 cut(s)	137, 283, 411, 1843, 2165, 2202
Cfr10I	RCCGGY	2 cut(s)	1416, 2150
Cfr13I	GGNCC	6 cut(s)	25, 350, 1380, 1414, 1541, 1604
Cfr9I	CCCGGG	1 cut(s)	2127
ClaI	ATCGAT	2 cut(s)	924, 1353
CseI	GACGC	4 cut(s)	152, 166, 2200, 2240
CsiI	ACCWGGT	2 cut(s)	1137, 1489
Csp6I	GTAC	4 cut(s)	213, 630, 904, 1855
CspAI	ACCGGT	1 cut(s)	1416
CviAII	CATG	8 cut(s)	239, 491, 668, 1112, 1158, 1175, 1223, 1427
CviQI	GTAC	4 cut(s)	213, 630, 904, 1855
DdeI	CTNAG	8 cut(s)	650, 813, 887, 971, 984, 1689, 2273, 2316
DinI	GGCGCC	2 cut(s)	136, 282
DpnI	GATC	8 cut(s)	372, 522, 564, 1107, 1737, 1804, 1956, 2039
DpnII	GATC	8 cut(s)	370, 520, 562, 1105, 1735, 1802, 1954, 2037
DraI	TTTAAA	1 cut(s)	1563
EaeI	YGGCCR	2 cut(s)	40, 1148
EagI	CGGCCG	1 cut(s)	40
Eam1104I	CTCTTC	1 cut(s)	1871
EarI	CTCTTC	1 cut(s)	1871
EciI	GGCGGA	1 cut(s)	2167
Ecl136II	GAGCTC	2 cut(s)	18, 157
EclXI	CGGCCG	1 cut(s)	40
Eco130I	CCWWGG	1 cut(s)	1999
Eco24I	GRGCYC	3 cut(s)	20, 159, 1941
Eco32I	GATATC	2 cut(s)	769, 1210
Eco47I	GGWCC	3 cut(s)	25, 1414, 1541
Eco47III	AGCGCT	1 cut(s)	2201
Eco52I	CGGCCG	1 cut(s)	40
Eco53kI	GAGCTC	2 cut(s)	18, 157
Eco57I	CTGAAG	1 cut(s)	878
Eco72I	CACGTG	2 cut(s)	709, 947
Eco88I	CYCGRG	2 cut(s)	2127, 2195
EcoICRI	GAGCTC	2 cut(s)	18, 157
EcoRI	GAATTC	2 cut(s)	1184, 1466
EcoRII	CCWGG	4 cut(s)	1137, 1489, 1534, 1777
EcoRV	GATATC	2 cut(s)	769, 1210
EcoT14I	CCWWGG	1 cut(s)	1999
EcoT22I	ATGCAT	3 cut(s)	438, 669, 1522
EcoT38I	GRGCYC	3 cut(s)	20, 159, 1941
EgeI	GGCGCC	2 cut(s)	136, 282
EheI	GGCGCC	2 cut(s)	136, 282
ErhI	CCWWGG	1 cut(s)	1999
Esp3I	CGTCTC	3 cut(s)	809, 2126, 2176
FaeI	CATG	8 cut(s)	242, 494, 671, 1115, 1161, 1178, 1226, 1430
FaqI	GGGAC	2 cut(s)	1437, 1684
FatI	CATG	8 cut(s)	238, 490, 667, 1111, 1157, 1174, 1222, 1426
FauI	CCCGC	1 cut(s)	958
FauNDI	CATATG	2 cut(s)	1264, 1338
FblI	GTMKAC	1 cut(s)	60
FokI	GGATG	8 cut(s)	308, 320, 416, 587, 848, 1035, 1445, 1973
FriOI	GRGCYC	3 cut(s)	20, 159, 1941
FspBI	CTAG	6 cut(s)	383, 459, 1127, 1179, 1580, 1733
GlaI	GCGC	6 cut(s)	136, 282, 410, 1842, 2164, 2201
GsaI	CCCAGC	1 cut(s)	2158
GsuI	CTGGAG	3 cut(s)	848, 1038, 1461
HaeII	RGCGCY	5 cut(s)	138, 284, 412, 2166, 2203
HaeIII	GGCC	5 cut(s)	42, 351, 1150, 1382, 1606
HapII	CCGG	6 cut(s)	43, 353, 1417, 1681, 2128, 2151
HgaI	GACGC	4 cut(s)	152, 166, 2200, 2240
HhaI	GCGC	6 cut(s)	137, 283, 411, 1843, 2165, 2202
Hin1I	GRCGYC	5 cut(s)	57, 135, 281, 2232, 2310
Hin1II	CATG	8 cut(s)	242, 494, 671, 1115, 1161, 1178, 1226, 1430
Hin6I	GCGC	6 cut(s)	135, 281, 409, 1841, 2163, 2200
HinP1I	GCGC	6 cut(s)	135, 281, 409, 1841, 2163, 2200
HincII	GTYRAC	6 cut(s)	61, 219, 760, 1236, 1726, 2215
HindII	GTYRAC	6 cut(s)	61, 219, 760, 1236, 1726, 2215
HinfI	GANTC	6 cut(s)	271, 932, 941, 1313, 1978, 2141
HpaI	GTTAAC	2 cut(s)	219, 760
HpaII	CCGG	6 cut(s)	43, 353, 1417, 1681, 2128, 2151
HphI	GGTGA	3 cut(s)	740, 1153, 1262
Hpy188I	TCNGA	4 cut(s)	1802, 1875, 2037, 2330
HpyAV	CCTTC	6 cut(s)	125, 394, 527, 594, 1223, 2191
HpyCH4III	ACNGT	4 cut(s)	265, 484, 1675, 2170
HpyF3I	CTNAG	8 cut(s)	650, 813, 887, 971, 984, 1689, 2273, 2316
Hsp92I	GRCGYC	5 cut(s)	57, 135, 281, 2232, 2310
Hsp92II	CATG	8 cut(s)	242, 494, 671, 1115, 1161, 1178, 1226, 1430
HspAI	GCGC	6 cut(s)	135, 281, 409, 1841, 2163, 2200
KasI	GGCGCC	2 cut(s)	134, 280
KroI	GCCGGC	1 cut(s)	2150
KroNI	GCCGGC	1 cut(s)	2152
KspAI	GTTAAC	2 cut(s)	219, 760
Kzo9I	GATC	8 cut(s)	370, 520, 562, 1105, 1735, 1802, 1954, 2037
LguI	GCTCTTC	1 cut(s)	1871
LmnI	GCTCC	7 cut(s)	162, 712, 829, 1501, 1803, 2056, 2325
Lsp1109I	GCAGC	8 cut(s)	154, 467, 680, 962, 1003, 1641, 1830, 1858
LweI	GCATC	9 cut(s)	865, 916, 978, 1507, 1529, 1726, 1755, 1951, 2041
MabI	ACCWGGT	2 cut(s)	1137, 1489
MaeI	CTAG	6 cut(s)	383, 459, 1127, 1179, 1580, 1733
MaeIII	GTNAC	8 cut(s)	478, 583, 942, 1074, 1201, 1250, 1825, 2021
MalI	GATC	8 cut(s)	372, 522, 564, 1107, 1737, 1804, 1956, 2039
MbiI	CCGCTC	2 cut(s)	201, 1385
MboI	GATC	8 cut(s)	370, 520, 562, 1105, 1735, 1802, 1954, 2037
MflI	RGATCY	3 cut(s)	520, 1735, 1954
MhlI	GDGCHC	5 cut(s)	20, 159, 1054, 1498, 1941
MlsI	TGGCCA	1 cut(s)	1150
MluNI	TGGCCA	1 cut(s)	1150
Mly113I	GGCGCC	2 cut(s)	135, 281
MlyI	GAGTC	3 cut(s)	280, 950, 2135
Mox20I	TGGCCA	1 cut(s)	1150
Mph1103I	ATGCAT	3 cut(s)	438, 669, 1522
MroNI	GCCGGC	1 cut(s)	2150
MscI	TGGCCA	1 cut(s)	1150
MseI	TTAA	6 cut(s)	218, 249, 759, 1404, 1554, 1562
MslI	CAYNNNNRTG	5 cut(s)	495, 1221, 1431, 1595, 2012
Msp20I	TGGCCA	1 cut(s)	1150
MspA1I	CMGCKG	1 cut(s)	693
MspI	CCGG	6 cut(s)	43, 353, 1417, 1681, 2128, 2151
MspR9I	CCNGG	7 cut(s)	353, 1139, 1491, 1536, 1779, 2128, 2129
Mva1269I	GAATGC	4 cut(s)	179, 474, 681, 2007
MvaI	CCWGG	4 cut(s)	1139, 1491, 1536, 1779
MvnI	CGCG	1 cut(s)	1841
NaeI	GCCGGC	1 cut(s)	2152
NarI	GGCGCC	2 cut(s)	135, 281
NciI	CCSGG	3 cut(s)	353, 2128, 2129
NdeI	CATATG	2 cut(s)	1264, 1338
NdeII	GATC	8 cut(s)	370, 520, 562, 1105, 1735, 1802, 1954, 2037
NgoMIV	GCCGGC	1 cut(s)	2150
NlaIII	CATG	8 cut(s)	242, 494, 671, 1115, 1161, 1178, 1226, 1430
NlaIV	GGNNCC	3 cut(s)	136, 282, 1543
NmeAIII	GCCGAG	1 cut(s)	18
NmuCI	GTSAC	4 cut(s)	478, 942, 1250, 2021
NsiI	ATGCAT	3 cut(s)	438, 669, 1522
NspI	RCATGY	3 cut(s)	671, 1161, 1430
PaeI	GCATGC	1 cut(s)	671
PaeR7I	CTCGAG	1 cut(s)	2195
PagI	TCATGA	1 cut(s)	490
PaqCI	CACCTGC	1 cut(s)	716
PciI	ACATGT	2 cut(s)	1157, 1426
PciSI	GCTCTTC	1 cut(s)	1871
PcsI	WCGNNNNNNNCGW	9 cut(s)	11, 96, 108, 117, 150, 186, 2244, 2250, 2307
PctI	GAATGC	4 cut(s)	179, 474, 681, 2007
PdiI	GCCGGC	1 cut(s)	2152
PfeI	GAWTC	3 cut(s)	932, 1313, 1978
PflFI	GACNNNGTC	2 cut(s)	56, 2144
PflMI	CCANNNNNTGG	2 cut(s)	787, 1667
PinAI	ACCGGT	1 cut(s)	1416
PleI	GAGTC	3 cut(s)	279, 949, 2135
PluTI	GGCGCC	2 cut(s)	138, 284
PmaCI	CACGTG	2 cut(s)	709, 947
PmlI	CACGTG	2 cut(s)	709, 947
PpsI	GAGTC	3 cut(s)	279, 949, 2135
Ppu21I	YACGTR	2 cut(s)	709, 947
PscI	ACATGT	2 cut(s)	1157, 1426
Psp124BI	GAGCTC	2 cut(s)	20, 159
Psp1406I	AACGTT	1 cut(s)	644
Psp6I	CCWGG	4 cut(s)	1137, 1489, 1534, 1777
PspCI	CACGTG	2 cut(s)	709, 947
PspFI	CCCAGC	1 cut(s)	2154
PspGI	CCWGG	4 cut(s)	1137, 1489, 1534, 1777
PspN4I	GGNNCC	3 cut(s)	136, 282, 1543
PspPI	GGNCC	6 cut(s)	25, 350, 1380, 1414, 1541, 1604
PspXI	VCTCGAGB	1 cut(s)	2195
PstI	CTGCAG	2 cut(s)	940, 1848
PsuI	RGATCY	3 cut(s)	520, 1735, 1954
PsyI	GACNNNGTC	2 cut(s)	56, 2144
PvuII	CAGCTG	1 cut(s)	693
RsaI	GTAC	4 cut(s)	214, 631, 905, 1856
RsaNI	GTAC	4 cut(s)	213, 630, 904, 1855
RseI	CAYNNNNRTG	5 cut(s)	495, 1221, 1431, 1595, 2012
SacI	GAGCTC	2 cut(s)	20, 159
SalI	GTCGAC	1 cut(s)	59
SapI	GCTCTTC	1 cut(s)	1871
SaqAI	TTAA	6 cut(s)	218, 249, 759, 1404, 1554, 1562
Sau3AI	GATC	8 cut(s)	370, 520, 562, 1105, 1735, 1802, 1954, 2037
Sau96I	GGNCC	6 cut(s)	25, 350, 1380, 1414, 1541, 1604
SchI	GAGTC	3 cut(s)	280, 950, 2135
ScrFI	CCNGG	7 cut(s)	353, 1139, 1491, 1536, 1779, 2128, 2129
SduI	GDGCHC	5 cut(s)	20, 159, 1054, 1498, 1941
SexAI	ACCWGGT	2 cut(s)	1137, 1489
SfaNI	GCATC	9 cut(s)	865, 916, 978, 1507, 1529, 1726, 1755, 1951, 2041
SfcI	CTRYAG	2 cut(s)	936, 1844
SfoI	GGCGCC	2 cut(s)	136, 282
Sfr274I	CTCGAG	1 cut(s)	2195
SinI	GGWCC	3 cut(s)	25, 1414, 1541
SlaI	CTCGAG	1 cut(s)	2195
SmaI	CCCGGG	1 cut(s)	2129
SmiI	ATTTAAAT	1 cut(s)	1563
SmiMI	CAYNNNNRTG	5 cut(s)	495, 1221, 1431, 1595, 2012
SmlI	CTYRAG	3 cut(s)	914, 1289, 2195
SmoI	CTYRAG	3 cut(s)	914, 1289, 2195
SphI	GCATGC	1 cut(s)	671
SsiI	CCGC	9 cut(s)	199, 268, 278, 965, 1383, 1588, 1768, 2178, 2260
SspDI	GGCGCC	2 cut(s)	134, 280
SspI	AATATT	2 cut(s)	702, 1926
SspMI	CTAG	6 cut(s)	383, 459, 1127, 1179, 1580, 1733
SstI	GAGCTC	2 cut(s)	20, 159
StyD4I	CCNGG	7 cut(s)	351, 1137, 1489, 1534, 1777, 2126, 2127
StyI	CCWWGG	1 cut(s)	1999
SwaI	ATTTAAAT	1 cut(s)	1563
TaaI	ACNGT	4 cut(s)	265, 484, 1675, 2170
TaqII	GACCGA	2 cut(s)	78, 2134
TatI	WGTACW	2 cut(s)	903, 1854
TauI	GCSGC	4 cut(s)	201, 281, 1385, 1590
TfiI	GAWTC	3 cut(s)	932, 1313, 1978
Tru1I	TTAA	6 cut(s)	218, 249, 759, 1404, 1554, 1562
Tru9I	TTAA	6 cut(s)	218, 249, 759, 1404, 1554, 1562
TscAI	CASTG	4 cut(s)	15, 291, 487, 1519
TseFI	GTSAC	4 cut(s)	478, 942, 1250, 2021
TseI	GCWGC	8 cut(s)	167, 455, 693, 950, 991, 1654, 1843, 1846
Tsp45I	GTSAC	4 cut(s)	478, 942, 1250, 2021
TspDTI	ATGAA	8 cut(s)	852, 910, 1100, 1101, 1205, 1211, 1339, 1449
TspGWI	ACGGA	2 cut(s)	141, 2243
TspMI	CCCGGG	1 cut(s)	2127
TspRI	CASTG	4 cut(s)	15, 291, 487, 1519
Tth111I	GACNNNGTC	2 cut(s)	56, 2144
Van91I	CCANNNNNTGG	2 cut(s)	787, 1667
VpaK11BI	GGWCC	3 cut(s)	25, 1414, 1541
XapI	RAATTY	5 cut(s)	1184, 1460, 1466, 1558, 1564
XceI	RCATGY	3 cut(s)	671, 1161, 1430
XhoI	CTCGAG	1 cut(s)	2195
XmaI	CCCGGG	1 cut(s)	2127
XmiI	GTMKAC	1 cut(s)	60
XspI	CTAG	6 cut(s)	383, 459, 1127, 1179, 1580, 1733
ZraI	GACGTC	2 cut(s)	58, 2311
Zsp2I	ATGCAT	3 cut(s)	438, 669, 1522

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.