Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0007115

Physical Location & Seq

Genomic Coordinates Reverse (-)

27094698 .. 27099465

Gene Structure 4768 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1128600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2055 bp

ATGGTGGAGTTGTGCTTTGTTCTGGACCTGCGAAGCTTACCGCCTCCATTTCTCAGAGACTTGAAGCAGTCGCTGTTGCAGCTTGCGAATTTGTACGCCATTTCATCGCCGGCGCCGTGGGGCAGATCGGAGTCGCTCAGAGATCGGATTGGCCTGTGCTACGTTTTTCAAAATCCGATTTCCTTGTCCGATGAGATGAAGATCATATATACACCGAGTCCGAGCGGAAACTTCAATCTCCGCGACTTCCACCATGCGGTTAACAACTTGCCTGCACATGGATTTTGGCCTCAGATCGATGATTTGGGTGTGAAACTTTCCAGTGTCCTAAATGATCAAGTTTTGTACCACTGGGGAGGTAAAGATATCATGAGAAAAGTGATTGTCATAACCTCCTGTTTGCCTCGAGATGTCGACTTTGTCATGCTAAAAACTCTCACGGCGGCGGCCGAAAAGTGTGTTTCTGTCGATTTTGTACTGTTTGAGCAAAGATCATCCCATCTGAGCAATACAAAAGAGAATTTCAACAATTTTCAAACATGTATCTCTGATCTTGATAATTGCTCATTTCAAGCATATCTCCCAGACTGGAATCATTGTAGCCGTTCAAGGCCACAAGCTGGGGTTAGTTTGTTCTTACTATTAACAAAACTTGCAGATGTCAAAGTATTGCATGGCCTGGTAAACCGATGGTTACAGGATTTAAAGGATGACGTTGAAGAACCACTGCAAGCTCGTTTTAACTTCAAGAACAACCTTGTGGGCTCTGTGAAACAGATATCCTGCAACTTGTATATATCTGTCAATCCAATTATCGATGGTTTCTATCCCTGTCAGACATGCAGATGTCATGGCATTTCGCTGGAAGATGCTGTTAGAAATAGAAGCGAGGAACTTTCTTGTCCGGTCACAGGCTGTAATCTTGGAAGATGTGATGTGATTGAAAATTCTGTGAAAGTTGGAGTAAAAACAATCCTTTTACTGCCCTCATTCCCAAGCTCTATGAAGCTCAAGCGTGCTTCTTTGCCAATTGACTTCAATGTCATTGAGAGGACTAACATGGGGTCTCTAAGCGAAGGTGTTATAATGGGAGCTTCCTATGTTGTGATTCCATCAACTTTTCATGAGATAGAAACTAGTCCGGATGAAATTGATCAGTCAGAATTGAATACTCAACGCTACAAATTTGCAGTTTTCCGTGGGATTTGCAGTGCACTACATTCAATGGACCAGTGTCTGTTATGCTCTTCAAATTGTAATGTAGAAAGTATGACGGAGGGCACATTGCACTGCTATTATATTCTTCAACCTTCGGGCAACGGGCCGATGCTTCTCAGACGCATTGCCGGATCAGAGGAAGTTTTGCACATTCCCAATCTCAACCAATTAACAACTAGTTCTTCAGTACGTAAGGAGATTGAGAACTCAATTAACGAATCTTTGTCAAAGATTGATGTTAGAGATTATAATCCCATGCTGCACGAGAGGGGCTTCCATCAGAATTTAAACTTGCTTGTAAAGGAGAGCTTACAGTTGGGATCAATAGCCCCTGGATTTGAAGAGCAAACCTATGAGCCAAACGCAACCGAACCAAAACTTCCAGAAGTGGCTGCACAGTCAAATTCAACAATAGATCTTCCAATCATCAGAAACGAAGCCTCACACTGTGATCCGACAGCCATAGAAGACAAAGCATCTGCTTGCATTACAGAAGAGTGGGAGAAGCTGATCGTCAATGATGTCTCCGAGCTACATTCTCCAGTTTGCACTTCCAAACCGAAGCTAGATCAATCAGTCCTATCGCCACCAGATGGTAACCGGCAACTTGACGCGAAAACATCAAGAATTCTAGAGAGACTCGAGGTGCCGAGACAGTTCAAAAGAGAATCAGTGTCTCCGATCCTCACAAACAATGCCGGCGGCACAAAGAATCCGATTGTTGAGGTAAAGAGGCCTTTCATCCCATCCCAGCCTATTTCTGCTCCAAACCAACCCATAACTGGTAGCCAACTAATGAAACCAAATTTCCAGAGGCTAAAAAGGAAGCATAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

685

Amino Acids

76.6

Weight (kDa)

6.13

Isoelectric Point (pI)

51.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007115)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G07380 AT5G07380 AT5G07380 AT5G07380 AT5G07380 AT5G07380
fragaria_vesca	FvH4_5g10000 FvH4_5g10000 FvH4_5g10000 FvH4_5g10000
malus_domestica	MD06G1128600.v1.1
prunus_persica	Prupe.5G138400_v2.0.a1 Prupe.5G138400_v2.0.a1 Prupe.5G138400_v2.0.a1
pyrus_communis	pycom06g11900
rosa_chinensis	RchiOBHm_Chr7g0188261
rosa_laevigata	RLG00000004713
rosa_multiflora	Rmu_sc0008750.1_g000010
rosa_roxburghii	Rroxscaffold_3G00266550
rosa_rugosa	Rorug06G0489500
rosa_samantha	Rh7AG093900 Rh7BG095300 Rh7CG095700 Rh7DG095900
rosa_wichuraiana	Rw7G008090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1085, 1467
AasI	GACNNNNNNGTC	1 cut(s)	1040
Acc36I	ACCTGC	1 cut(s)	36
AccB1I	GGYRCC	2 cut(s)	112, 1864
AccB7I	CCANNNNNTGG	2 cut(s)	620, 1811
AccBSI	CCGCTC	1 cut(s)	225
AccI	GTMKAC	1 cut(s)	414
AccII	CGCG	2 cut(s)	243, 1832
AccIII	TCCGGA	1 cut(s)	1141
AciI	CCGC	7 cut(s)	41, 225, 241, 257, 443, 446, 1920
AclWI	GGATC	4 cut(s)	1357, 1546, 1664, 1894
AcoI	YGGCCR	1 cut(s)	447
AcsI	RAATTY	8 cut(s)	88, 520, 946, 1184, 1501, 1621, 1845, 2023
AcuI	CTGAAG	1 cut(s)	1386
AcyI	GRCGYC	1 cut(s)	113
AdeI	CACNNNGTG	1 cut(s)	1667
AfaI	GTAC	4 cut(s)	95, 347, 477, 1407
AfiI	CCNNNNNNNGG	6 cut(s)	256, 278, 620, 911, 1811, 2000
AflIII	ACRYGT	1 cut(s)	539
AhlI	ACTAGT	2 cut(s)	1136, 1394
AjnI	CCWGG	2 cut(s)	678, 1549
Alw21I	GWGCWC	1 cut(s)	1216
Alw26I	GTCTC	6 cut(s)	51, 1071, 1747, 1849, 1864, 1899
Alw44I	GTGCAC	1 cut(s)	1212
AlwI	GGATC	4 cut(s)	1357, 1546, 1664, 1894
AlwNI	CAGNNNCTG	2 cut(s)	73, 1237
Ama87I	CYCGRG	2 cut(s)	405, 1859
Aor13HI	TCCGGA	1 cut(s)	1141
AoxI	GGCC	7 cut(s)	151, 287, 447, 611, 676, 1322, 1952
ApaLI	GTGCAC	1 cut(s)	1212
ApeKI	GCWGC	3 cut(s)	79, 1477, 1610
ApoI	RAATTY	8 cut(s)	88, 520, 946, 1184, 1501, 1621, 1845, 2023
AspLEI	GCGC	1 cut(s)	115
AspS9I	GGNCC	3 cut(s)	25, 1228, 1322
AvaI	CYCGRG	2 cut(s)	405, 1859
AvaII	GGWCC	2 cut(s)	25, 1228
BaeGI	GKGCMC	2 cut(s)	1216, 1283
BanI	GGYRCC	2 cut(s)	112, 1864
BanII	GRGCYC	1 cut(s)	767
BauI	CACGAG	1 cut(s)	1481
BbsI	GAAGAC	1 cut(s)	1692
Bbv12I	GWGCWC	1 cut(s)	1216
BbvI	GCAGC	3 cut(s)	91, 1464, 1597
BccI	CCATC	7 cut(s)	507, 684, 812, 1120, 1503, 1805, 1972
BceAI	ACGGC	3 cut(s)	100, 456, 588
BciT130I	CCWGG	2 cut(s)	680, 1551
BclI	TGATCA	2 cut(s)	334, 1153
BcoDI	GTCTC	6 cut(s)	51, 1071, 1747, 1849, 1864, 1899
BcuI	ACTAGT	2 cut(s)	1136, 1394
BfaI	CTAG	4 cut(s)	1137, 1395, 1784, 1850
BfoI	RGCGCY	1 cut(s)	116
BfuAI	ACCTGC	1 cut(s)	36
BglII	AGATCT	1 cut(s)	1633
BisI	GCNGC	6 cut(s)	80, 444, 447, 1478, 1611, 1921
BlsI	GCNGC	6 cut(s)	81, 445, 448, 1479, 1612, 1922
Bme1390I	CCNGG	2 cut(s)	680, 1551
Bme18I	GGWCC	2 cut(s)	25, 1228
BmeT110I	CYCGRG	2 cut(s)	405, 1859
BmgT120I	GGNCC	3 cut(s)	25, 1228, 1322
BmiI	GGNNCC	2 cut(s)	114, 1866
BmrFI	CCNGG	2 cut(s)	680, 1551
BmrI	ACTGGG	1 cut(s)	361
BmsI	GCATC	3 cut(s)	859, 1317, 1703
BmuI	ACTGGG	1 cut(s)	361
BoxI	GACNNNNGTC	1 cut(s)	1233
BpiI	GAAGAC	1 cut(s)	1692
BpmI	CTGGAG	1 cut(s)	1743
BpuEI	CTTGAG	1 cut(s)	995
Bsa29I	ATCGAT	2 cut(s)	297, 816
BsaAI	YACGTR	1 cut(s)	1409
BsaBI	GATNNNNATC	2 cut(s)	200, 1467
BsaHI	GRCGYC	1 cut(s)	113
BsaI	GGTCTC	1 cut(s)	1071
BsaJI	CCNNGG	3 cut(s)	116, 1198, 1549
BsaWI	WCCGGW	2 cut(s)	904, 1141
Bsc4I	CCNNNNNNNGG	6 cut(s)	256, 278, 620, 911, 1811, 2000
Bse118I	RCCGGY	3 cut(s)	109, 1818, 1916
Bse1I	ACTGG	6 cut(s)	321, 356, 593, 1231, 1760, 2005
Bse3DI	GCAATG	2 cut(s)	1283, 1341
Bse8I	GATNNNNATC	2 cut(s)	200, 1467
BseAI	TCCGGA	1 cut(s)	1141
BseBI	CCWGG	2 cut(s)	680, 1551
BseCI	ATCGAT	2 cut(s)	297, 816
BseDI	CCNNGG	3 cut(s)	116, 1198, 1549
BseGI	GGATG	5 cut(s)	494, 715, 1150, 1959, 1964
BseJI	GATNNNNATC	2 cut(s)	200, 1467
BseLI	CCNNNNNNNGG	6 cut(s)	256, 278, 620, 911, 1811, 2000
BseMI	GCAATG	2 cut(s)	1283, 1341
BseMII	CTCAG	5 cut(s)	67, 151, 305, 494, 1348
BseNI	ACTGG	6 cut(s)	321, 356, 593, 1231, 1760, 2005
BseSI	GKGCMC	2 cut(s)	1216, 1283
BseX3I	CGGCCG	1 cut(s)	447
BseXI	GCAGC	3 cut(s)	91, 1464, 1597
BseYI	CCCAGC	2 cut(s)	620, 1968
BsgI	GTGCAG	3 cut(s)	258, 1463, 1596
Bsh1236I	CGCG	2 cut(s)	243, 1832
Bsh1285I	CGRYCG	1 cut(s)	450
BshFI	GGCC	7 cut(s)	153, 289, 449, 613, 678, 1324, 1954
BshNI	GGYRCC	2 cut(s)	112, 1864
BshVI	ATCGAT	2 cut(s)	297, 816
BsiEI	CGRYCG	1 cut(s)	450
BsiHKAI	GWGCWC	1 cut(s)	1216
BsiHKCI	CYCGRG	2 cut(s)	405, 1859
BsiSI	CCGG	6 cut(s)	110, 905, 1142, 1347, 1819, 1917
BslI	CCNNNNNNNGG	6 cut(s)	256, 278, 620, 911, 1811, 2000
BsmAI	GTCTC	6 cut(s)	51, 1071, 1747, 1849, 1864, 1899
BsnI	GGCC	7 cut(s)	153, 289, 449, 613, 678, 1324, 1954
Bso31I	GGTCTC	1 cut(s)	1071
BsoBI	CYCGRG	2 cut(s)	405, 1859
Bsp1286I	GDGCHC	3 cut(s)	767, 1216, 1283
Bsp13I	TCCGGA	1 cut(s)	1141
BspACI	CCGC	7 cut(s)	41, 225, 241, 257, 443, 446, 1920
BspANI	GGCC	7 cut(s)	153, 289, 449, 613, 678, 1324, 1954
BspCNI	CTCAG	5 cut(s)	66, 150, 304, 495, 1347
BspDI	ATCGAT	2 cut(s)	297, 816
BspEI	TCCGGA	1 cut(s)	1141
BspFNI	CGCG	2 cut(s)	243, 1832
BspHI	TCATGA	2 cut(s)	369, 1123
BspLI	GGNNCC	2 cut(s)	114, 1866
BspMI	ACCTGC	1 cut(s)	36
BspPI	GGATC	4 cut(s)	1357, 1546, 1664, 1894
BspQI	GCTCTTC	2 cut(s)	1252, 1554
BspT107I	GGYRCC	2 cut(s)	112, 1864
BspTNI	GGTCTC	1 cut(s)	1071
BsrBI	CCGCTC	1 cut(s)	225
BsrDI	GCAATG	2 cut(s)	1283, 1341
BsrFI	RCCGGY	3 cut(s)	109, 1818, 1916
BsrI	ACTGG	6 cut(s)	321, 356, 593, 1231, 1760, 2005
BssAI	RCCGGY	3 cut(s)	109, 1818, 1916
BssECI	CCNNGG	3 cut(s)	116, 1198, 1549
BssNI	GRCGYC	1 cut(s)	113
BssSI	CACGAG	1 cut(s)	1481
Bst2BI	CACGAG	1 cut(s)	1481
Bst2UI	CCWGG	2 cut(s)	680, 1551
Bst4CI	ACNGT	5 cut(s)	480, 1533, 1617, 1667, 1875
Bst6I	CTCTTC	3 cut(s)	1252, 1554, 1707
BstACI	GRCGYC	1 cut(s)	113
BstBAI	YACGTR	1 cut(s)	1409
BstC8I	GCNNGC	7 cut(s)	84, 111, 273, 732, 1017, 1702, 1918
BstDEI	CTNAG	6 cut(s)	53, 137, 291, 503, 1070, 1334
BstDSI	CCRYGG	2 cut(s)	116, 1198
BstEII	GGTNACC	1 cut(s)	1814
BstF5I	GGATG	5 cut(s)	494, 715, 1150, 1959, 1964
BstFNI	CGCG	2 cut(s)	243, 1832
BstH2I	RGCGCY	1 cut(s)	116
BstHHI	GCGC	1 cut(s)	115
BstMAI	GTCTC	6 cut(s)	51, 1071, 1747, 1849, 1864, 1899
BstMCI	CGRYCG	1 cut(s)	450
BstMWI	GCNNNNNNNGC	1 cut(s)	79
BstNI	CCWGG	2 cut(s)	680, 1551
BstNSI	RCATGY	2 cut(s)	543, 843
BstPAI	GACNNNNGTC	1 cut(s)	1233
BstPI	GGTNACC	1 cut(s)	1814
BstSCI	CCNGG	2 cut(s)	678, 1549
BstSLI	GKGCMC	2 cut(s)	1216, 1283
BstSNI	TACGTA	1 cut(s)	1409
BstUI	CGCG	2 cut(s)	243, 1832
BstV1I	GCAGC	3 cut(s)	91, 1464, 1597
BstV2I	GAAGAC	1 cut(s)	1692
BstX2I	RGATCY	1 cut(s)	1633
BstYI	RGATCY	1 cut(s)	1633
BstZI	CGGCCG	1 cut(s)	447
Bsu15I	ATCGAT	2 cut(s)	297, 816
BsuRI	GGCC	7 cut(s)	153, 289, 449, 613, 678, 1324, 1954
BsuTUI	ATCGAT	2 cut(s)	297, 816
BtgI	CCRYGG	2 cut(s)	116, 1198
BtgZI	GCGATG	1 cut(s)	90
BtsCI	GGATG	5 cut(s)	494, 715, 1150, 1959, 1964
BtsI	GCAGTG	3 cut(s)	725, 1216, 1288
BtsIMutI	CAGTG	8 cut(s)	328, 349, 725, 1216, 1238, 1288, 1663, 1896
BveI	ACCTGC	1 cut(s)	36
Cac8I	GCNNGC	7 cut(s)	84, 111, 273, 732, 1017, 1702, 1918
CaiI	CAGNNNCTG	2 cut(s)	73, 1237
CciI	TCATGA	2 cut(s)	369, 1123
CfoI	GCGC	1 cut(s)	115
Cfr10I	RCCGGY	3 cut(s)	109, 1818, 1916
Cfr13I	GGNCC	3 cut(s)	25, 1228, 1322
ClaI	ATCGAT	2 cut(s)	297, 816
CseI	GACGC	2 cut(s)	1347, 1838
Csp6I	GTAC	4 cut(s)	94, 346, 476, 1406
CviQI	GTAC	4 cut(s)	94, 346, 476, 1406
DdeI	CTNAG	6 cut(s)	53, 137, 291, 503, 1070, 1334
DinI	GGCGCC	1 cut(s)	114
DraI	TTTAAA	2 cut(s)	705, 1506
DraIII	CACNNNGTG	1 cut(s)	1667
DrdI	GACNNNNNNGTC	1 cut(s)	1040
DseDI	GACNNNNNNGTC	1 cut(s)	1040
EaeI	YGGCCR	1 cut(s)	447
EagI	CGGCCG	1 cut(s)	447
Eam1104I	CTCTTC	3 cut(s)	1252, 1554, 1707
EarI	CTCTTC	3 cut(s)	1252, 1554, 1707
EclXI	CGGCCG	1 cut(s)	447
Eco105I	TACGTA	1 cut(s)	1409
Eco147I	AGGCCT	1 cut(s)	1954
Eco24I	GRGCYC	1 cut(s)	767
Eco31I	GGTCTC	1 cut(s)	1071
Eco32I	GATATC	2 cut(s)	367, 780
Eco47I	GGWCC	2 cut(s)	25, 1228
Eco52I	CGGCCG	1 cut(s)	447
Eco57I	CTGAAG	1 cut(s)	1386
Eco88I	CYCGRG	2 cut(s)	405, 1859
Eco91I	GGTNACC	1 cut(s)	1814
EcoO65I	GGTNACC	1 cut(s)	1814
EcoRI	GAATTC	1 cut(s)	1845
EcoRII	CCWGG	2 cut(s)	678, 1549
EcoRV	GATATC	2 cut(s)	367, 780
EcoT38I	GRGCYC	1 cut(s)	767
EgeI	GGCGCC	1 cut(s)	114
EheI	GGCGCC	1 cut(s)	114
FalI	AAGNNNNNCTT	2 cut(s)	1511, 1543
FbaI	TGATCA	2 cut(s)	334, 1153
FblI	GTMKAC	1 cut(s)	414
Fnu4HI	GCNGC	6 cut(s)	80, 444, 447, 1478, 1611, 1921
FokI	GGATG	5 cut(s)	481, 722, 1157, 1946, 1951
FriOI	GRGCYC	1 cut(s)	767
Fsp4HI	GCNGC	6 cut(s)	80, 444, 447, 1478, 1611, 1921
FspBI	CTAG	4 cut(s)	1137, 1395, 1784, 1850
GlaI	GCGC	1 cut(s)	114
GluI	GCNGC	6 cut(s)	80, 444, 447, 1478, 1611, 1921
GsaI	CCCAGC	2 cut(s)	624, 1972
GsuI	CTGGAG	1 cut(s)	1743
HaeII	RGCGCY	1 cut(s)	116
HaeIII	GGCC	7 cut(s)	153, 289, 449, 613, 678, 1324, 1954
HapII	CCGG	6 cut(s)	110, 905, 1142, 1347, 1819, 1917
HgaI	GACGC	2 cut(s)	1347, 1838
HhaI	GCGC	1 cut(s)	115
Hin1I	GRCGYC	1 cut(s)	113
Hin6I	GCGC	1 cut(s)	113
HinP1I	GCGC	1 cut(s)	113
HincII	GTYRAC	2 cut(s)	262, 415
HindII	GTYRAC	2 cut(s)	262, 415
HindIII	AAGCTT	1 cut(s)	34
HinfI	GANTC	8 cut(s)	131, 217, 592, 1108, 1436, 1857, 1886, 1930
HpaI	GTTAAC	1 cut(s)	262
HpaII	CCGG	6 cut(s)	110, 905, 1142, 1347, 1819, 1917
Hpy166II	GTNNAC	4 cut(s)	262, 415, 685, 1214
Hpy8I	GTNNAC	4 cut(s)	262, 415, 685, 1214
HpyAV	CCTTC	2 cut(s)	1070, 1320
HpyCH4III	ACNGT	5 cut(s)	480, 1533, 1617, 1667, 1875
HpyCH4IV	ACGT	3 cut(s)	162, 714, 1408
HpyF10VI	GCNNNNNNNGC	1 cut(s)	79
HpyF3I	CTNAG	6 cut(s)	53, 137, 291, 503, 1070, 1334
HpySE526I	ACGT	3 cut(s)	162, 714, 1408
Hsp92I	GRCGYC	1 cut(s)	113
HspAI	GCGC	1 cut(s)	113
KasI	GGCGCC	1 cut(s)	112
Kpn2I	TCCGGA	1 cut(s)	1141
KroI	GCCGGC	2 cut(s)	109, 1916
KroNI	GCCGGC	2 cut(s)	111, 1918
Ksp22I	TGATCA	2 cut(s)	334, 1153
KspAI	GTTAAC	1 cut(s)	262
LguI	GCTCTTC	2 cut(s)	1252, 1554
LmnI	GCTCC	2 cut(s)	1091, 1987
Lsp1109I	GCAGC	3 cut(s)	91, 1464, 1597
LweI	GCATC	3 cut(s)	859, 1317, 1703
MaeI	CTAG	4 cut(s)	1137, 1395, 1784, 1850
MaeII	ACGT	3 cut(s)	162, 714, 1408
MaeIII	GTNAC	3 cut(s)	693, 907, 1814
MbiI	CCGCTC	1 cut(s)	225
MfeI	CAATTG	1 cut(s)	1029
MflI	RGATCY	1 cut(s)	1633
MhlI	GDGCHC	3 cut(s)	767, 1216, 1283
Mly113I	GGCGCC	1 cut(s)	113
MlyI	GAGTC	3 cut(s)	140, 226, 1851
MmeI	TCCRAC	2 cut(s)	940, 1697
MreI	CGCCGGCG	1 cut(s)	109
MroI	TCCGGA	1 cut(s)	1141
MroNI	GCCGGC	2 cut(s)	109, 1916
MseI	TTAA	7 cut(s)	261, 644, 704, 741, 1388, 1431, 1505
MslI	CAYNNNNRTG	1 cut(s)	844
MspI	CCGG	6 cut(s)	110, 905, 1142, 1347, 1819, 1917
MspR9I	CCNGG	2 cut(s)	680, 1551
MunI	CAATTG	1 cut(s)	1029
MvaI	CCWGG	2 cut(s)	680, 1551
MvnI	CGCG	2 cut(s)	243, 1832
MwoI	GCNNNNNNNGC	1 cut(s)	79
NaeI	GCCGGC	2 cut(s)	111, 1918
NarI	GGCGCC	1 cut(s)	113
NgoMIV	GCCGGC	2 cut(s)	109, 1916
NlaIV	GGNNCC	2 cut(s)	114, 1866
NmeAIII	GCCGAG	1 cut(s)	1893
NmuCI	GTSAC	1 cut(s)	907
NspI	RCATGY	2 cut(s)	543, 843
PaeR7I	CTCGAG	2 cut(s)	405, 1859
PagI	TCATGA	2 cut(s)	369, 1123
PceI	AGGCCT	1 cut(s)	1954
PciI	ACATGT	1 cut(s)	539
PciSI	GCTCTTC	2 cut(s)	1252, 1554
PcsI	WCGNNNNNNNCGW	1 cut(s)	113
PdiI	GCCGGC	2 cut(s)	111, 1918
PfeI	GAWTC	5 cut(s)	592, 1108, 1436, 1886, 1930
PflFI	GACNNNGTC	1 cut(s)	419
PflMI	CCANNNNNTGG	2 cut(s)	620, 1811
PkrI	GCNGC	6 cut(s)	81, 445, 448, 1479, 1612, 1922
PleI	GAGTC	3 cut(s)	139, 225, 1851
PluTI	GGCGCC	1 cut(s)	116
PpsI	GAGTC	3 cut(s)	139, 225, 1851
Ppu21I	YACGTR	1 cut(s)	1409
PscI	ACATGT	1 cut(s)	539
PshAI	GACNNNNGTC	1 cut(s)	1233
PsiI	TTATAA	2 cut(s)	1085, 1467
Psp6I	CCWGG	2 cut(s)	678, 1549
PspEI	GGTNACC	1 cut(s)	1814
PspFI	CCCAGC	2 cut(s)	620, 1968
PspGI	CCWGG	2 cut(s)	678, 1549
PspN4I	GGNNCC	2 cut(s)	114, 1866
PspPI	GGNCC	3 cut(s)	25, 1228, 1322
PspXI	VCTCGAGB	1 cut(s)	1859
PstNI	CAGNNNCTG	2 cut(s)	73, 1237
PsuI	RGATCY	1 cut(s)	1633
PsyI	GACNNNGTC	1 cut(s)	419
RsaI	GTAC	4 cut(s)	95, 347, 477, 1407
RsaNI	GTAC	4 cut(s)	94, 346, 476, 1406
RseI	CAYNNNNRTG	1 cut(s)	844
SalI	GTCGAC	1 cut(s)	413
SapI	GCTCTTC	2 cut(s)	1252, 1554
SaqAI	TTAA	7 cut(s)	261, 644, 704, 741, 1388, 1431, 1505
SatI	GCNGC	6 cut(s)	80, 444, 447, 1478, 1611, 1921
Sau96I	GGNCC	3 cut(s)	25, 1228, 1322
SchI	GAGTC	3 cut(s)	140, 226, 1851
ScrFI	CCNGG	2 cut(s)	680, 1551
SduI	GDGCHC	3 cut(s)	767, 1216, 1283
SfaNI	GCATC	3 cut(s)	859, 1317, 1703
SfoI	GGCGCC	1 cut(s)	114
Sfr274I	CTCGAG	2 cut(s)	405, 1859
SgrAI	CRCCGGYG	1 cut(s)	109
SinI	GGWCC	2 cut(s)	25, 1228
SlaI	CTCGAG	2 cut(s)	405, 1859
SmiMI	CAYNNNNRTG	1 cut(s)	844
SmlI	CTYRAG	3 cut(s)	405, 1010, 1859
SmoI	CTYRAG	3 cut(s)	405, 1010, 1859
SnaBI	TACGTA	1 cut(s)	1409
SpeI	ACTAGT	2 cut(s)	1136, 1394
SseBI	AGGCCT	1 cut(s)	1954
SsiI	CCGC	7 cut(s)	41, 225, 241, 257, 443, 446, 1920
SspDI	GGCGCC	1 cut(s)	112
SspMI	CTAG	4 cut(s)	1137, 1395, 1784, 1850
StuI	AGGCCT	1 cut(s)	1954
StyD4I	CCNGG	2 cut(s)	678, 1549
TaaI	ACNGT	5 cut(s)	480, 1533, 1617, 1667, 1875
TaiI	ACGT	3 cut(s)	165, 717, 1411
TaqI	TCGA	6 cut(s)	297, 406, 414, 468, 816, 1860
TatI	WGTACW	1 cut(s)	475
TauI	GCSGC	3 cut(s)	446, 449, 1923
TfiI	GAWTC	5 cut(s)	592, 1108, 1436, 1886, 1930
Tru1I	TTAA	7 cut(s)	261, 644, 704, 741, 1388, 1431, 1505
Tru9I	TTAA	7 cut(s)	261, 644, 704, 741, 1388, 1431, 1505
TscAI	CASTG	8 cut(s)	328, 356, 732, 1216, 1238, 1295, 1670, 1896
TseFI	GTSAC	1 cut(s)	907
TseI	GCWGC	3 cut(s)	79, 1477, 1610
Tsp45I	GTSAC	1 cut(s)	907
TspDTI	ATGAA	7 cut(s)	93, 212, 1019, 1112, 1161, 1948, 2030
TspGWI	ACGGA	2 cut(s)	1187, 1289
TspRI	CASTG	8 cut(s)	328, 356, 732, 1216, 1238, 1295, 1670, 1896
Tth111I	GACNNNGTC	1 cut(s)	419
Van91I	CCANNNNNTGG	2 cut(s)	620, 1811
VneI	GTGCAC	1 cut(s)	1212
VpaK11BI	GGWCC	2 cut(s)	25, 1228
XapI	RAATTY	8 cut(s)	88, 520, 946, 1184, 1501, 1621, 1845, 2023
XbaI	TCTAGA	1 cut(s)	1849
XceI	RCATGY	2 cut(s)	543, 843
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1997
XhoI	CTCGAG	2 cut(s)	405, 1859
XmiI	GTMKAC	1 cut(s)	414
XspI	CTAG	4 cut(s)	1137, 1395, 1784, 1850

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.