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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G07380 AT5G07380 AT5G07380 AT5G07380 AT5G07380 AT5G07380 |
| fragaria_vesca | FvH4_5g10000 FvH4_5g10000 FvH4_5g10000 FvH4_5g10000 |
| malus_domestica | MD06G1128600.v1.1 |
| prunus_persica | Prupe.5G138400_v2.0.a1 Prupe.5G138400_v2.0.a1 Prupe.5G138400_v2.0.a1 |
| pyrus_communis | pycom06g11900 |
| rosa_chinensis | RchiOBHm_Chr7g0188261 |
| rosa_laevigata | RLG00000004713 |
| rosa_multiflora | Rmu_sc0008750.1_g000010 |
| rosa_roxburghii | Rroxscaffold_3G00266550 |
| rosa_rugosa | Rorug06G0489500 |
| rosa_samantha | Rh7AG093900 Rh7BG095300 Rh7CG095700 Rh7DG095900 |
| rosa_wichuraiana | Rw7G008090 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 968 |
| Acc65I | GGTACC | 1 cut(s) | 1736 |
| AccB1I | GGYRCC | 2 cut(s) | 1736, 1786 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1057, 1150 |
| AccBSI | CCGCTC | 1 cut(s) | 136 |
| AccII | CGCG | 1 cut(s) | 98 |
| AccIII | TCCGGA | 1 cut(s) | 30 |
| AciI | CCGC | 5 cut(s) | 134, 225, 446, 449, 1741 |
| AclWI | GGATC | 5 cut(s) | 150, 581, 1270, 1535, 1599 |
| AcsI | RAATTY | 5 cut(s) | 874, 1334, 1514, 1846, 1943 |
| AcuI | CTGAAG | 6 cut(s) | 217, 218, 949, 1053, 1209, 1623 |
| AdeI | CACNNNGTG | 1 cut(s) | 259 |
| AfaI | GTAC | 5 cut(s) | 21, 209, 347, 722, 1738 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 839, 840, 1057, 1150, 1733 |
| AflIII | ACRYGT | 1 cut(s) | 575 |
| AgsI | TTSAA | 9 cut(s) | 169, 572, 676, 1137, 1164, 1559, 1721, 1851, 1948 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1360 |
| AjnI | CCWGG | 3 cut(s) | 606, 1050, 1143 |
| Alw21I | GWGCWC | 1 cut(s) | 1129 |
| Alw26I | GTCTC | 6 cut(s) | 51, 237, 584, 1374, 1669, 1771 |
| AlwI | GGATC | 5 cut(s) | 150, 581, 1270, 1535, 1599 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 73 |
| Ama87I | CYCGRG | 1 cut(s) | 405 |
| Aor13HI | TCCGGA | 1 cut(s) | 30 |
| AoxI | GGCC | 4 cut(s) | 151, 604, 1191, 1235 |
| ApeKI | GCWGC | 3 cut(s) | 443, 1396, 1645 |
| ApoI | RAATTY | 5 cut(s) | 874, 1334, 1514, 1846, 1943 |
| Asp718I | GGTACC | 1 cut(s) | 1736 |
| AspLEI | GCGC | 2 cut(s) | 123, 1254 |
| AspS9I | GGNCC | 3 cut(s) | 993, 1141, 1235 |
| AsuC2I | CCSGG | 1 cut(s) | 140 |
| AsuHPI | GGTGA | 3 cut(s) | 382, 945, 1716 |
| AvaI | CYCGRG | 1 cut(s) | 405 |
| AvaII | GGWCC | 2 cut(s) | 993, 1141 |
| BanI | GGYRCC | 2 cut(s) | 1736, 1786 |
| BanII | GRGCYC | 2 cut(s) | 695, 929 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 191, 223 |
| BbsI | GAAGAC | 2 cut(s) | 157, 1614 |
| Bbv12I | GWGCWC | 1 cut(s) | 1129 |
| BbvI | GCAGC | 3 cut(s) | 430, 1383, 1657 |
| BccI | CCATC | 8 cut(s) | 289, 507, 612, 733, 740, 1048, 1422, 1571 |
| BceAI | ACGGC | 4 cut(s) | 91, 242, 280, 456 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1101, 1135 |
| BciT130I | CCWGG | 3 cut(s) | 608, 1052, 1145 |
| BclI | TGATCA | 1 cut(s) | 387 |
| BcnI | CCSGG | 1 cut(s) | 140 |
| BcoDI | GTCTC | 6 cut(s) | 51, 237, 584, 1374, 1669, 1771 |
| BfaI | CTAG | 1 cut(s) | 216 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 118 |
| BglII | AGATCT | 1 cut(s) | 857 |
| BisI | GCNGC | 6 cut(s) | 134, 226, 444, 447, 1397, 1646 |
| BlpI | GCTNAGC | 1 cut(s) | 1202 |
| BlsI | GCNGC | 6 cut(s) | 135, 227, 445, 448, 1398, 1647 |
| Bme1390I | CCNGG | 4 cut(s) | 140, 608, 1052, 1145 |
| Bme18I | GGWCC | 2 cut(s) | 993, 1141 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1360 |
| BmeT110I | CYCGRG | 1 cut(s) | 405 |
| BmgT120I | GGNCC | 3 cut(s) | 993, 1141, 1235 |
| BmiI | GGNNCC | 6 cut(s) | 132, 651, 994, 995, 1738, 1788 |
| BmrFI | CCNGG | 4 cut(s) | 140, 608, 1052, 1145 |
| BmrI | ACTGGG | 1 cut(s) | 361 |
| BmsI | GCATC | 4 cut(s) | 552, 645, 787, 1741 |
| BmuI | ACTGGG | 1 cut(s) | 361 |
| BpiI | GAAGAC | 2 cut(s) | 157, 1614 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1562, 1594 |
| BpmI | CTGGAG | 1 cut(s) | 1665 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1701 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1202 |
| BpuEI | CTTGAG | 3 cut(s) | 923, 1747, 1802 |
| BpuMI | CCSGG | 1 cut(s) | 140 |
| Bsa29I | ATCGAT | 2 cut(s) | 616, 1080 |
| BsaAI | YACGTR | 1 cut(s) | 724 |
| BsaBI | GATNNNNATC | 2 cut(s) | 386, 1293 |
| BsaJI | CCNNGG | 2 cut(s) | 1111, 1144 |
| BsaWI | WCCGGW | 1 cut(s) | 30 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 12, 42 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 839, 840, 1057, 1150, 1733 |
| Bse118I | RCCGGY | 1 cut(s) | 112 |
| Bse1I | ACTGG | 4 cut(s) | 321, 356, 703, 1682 |
| Bse3DI | GCAATG | 2 cut(s) | 514, 1254 |
| Bse8I | GATNNNNATC | 2 cut(s) | 386, 1293 |
| BseAI | TCCGGA | 1 cut(s) | 30 |
| BseBI | CCWGG | 3 cut(s) | 608, 1052, 1145 |
| BseCI | ATCGAT | 2 cut(s) | 616, 1080 |
| BseDI | CCNNGG | 2 cut(s) | 1111, 1144 |
| BseGI | GGATG | 2 cut(s) | 643, 1563 |
| BseJI | GATNNNNATC | 2 cut(s) | 386, 1293 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 839, 840, 1057, 1150, 1733 |
| BseMI | GCAATG | 2 cut(s) | 514, 1254 |
| BseMII | CTCAG | 6 cut(s) | 67, 305, 517, 1092, 1216, 1261 |
| BseNI | ACTGG | 4 cut(s) | 321, 356, 703, 1682 |
| BseRI | GAGGAG | 1 cut(s) | 1283 |
| BseXI | GCAGC | 3 cut(s) | 430, 1383, 1657 |
| BseYI | CCCAGC | 1 cut(s) | 1453 |
| Bsh1236I | CGCG | 1 cut(s) | 98 |
| BshFI | GGCC | 4 cut(s) | 153, 606, 1193, 1237 |
| BshNI | GGYRCC | 2 cut(s) | 1736, 1786 |
| BshVI | ATCGAT | 2 cut(s) | 616, 1080 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1129 |
| BsiHKCI | CYCGRG | 1 cut(s) | 405 |
| BsiSI | CCGG | 3 cut(s) | 31, 113, 139 |
| BslFI | GGGAC | 2 cut(s) | 816, 979 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 839, 840, 1057, 1150, 1733 |
| BsmAI | GTCTC | 6 cut(s) | 51, 237, 584, 1374, 1669, 1771 |
| BsmFI | GGGAC | 2 cut(s) | 816, 979 |
| BsmI | GAATGC | 1 cut(s) | 281 |
| BsnI | GGCC | 4 cut(s) | 153, 606, 1193, 1237 |
| BsoBI | CYCGRG | 1 cut(s) | 405 |
| Bsp1286I | GDGCHC | 3 cut(s) | 695, 929, 1129 |
| Bsp13I | TCCGGA | 1 cut(s) | 30 |
| Bsp1407I | TGTACA | 1 cut(s) | 207 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1202 |
| BspACI | CCGC | 5 cut(s) | 134, 225, 446, 449, 1741 |
| BspANI | GGCC | 4 cut(s) | 153, 606, 1193, 1237 |
| BspCNI | CTCAG | 6 cut(s) | 66, 304, 516, 1093, 1215, 1260 |
| BspDI | ATCGAT | 2 cut(s) | 616, 1080 |
| BspEI | TCCGGA | 1 cut(s) | 30 |
| BspFNI | CGCG | 1 cut(s) | 98 |
| BspHI | TCATGA | 1 cut(s) | 369 |
| BspLI | GGNNCC | 6 cut(s) | 132, 651, 994, 995, 1738, 1788 |
| BspPI | GGATC | 5 cut(s) | 150, 581, 1270, 1535, 1599 |
| BspT107I | GGYRCC | 2 cut(s) | 1736, 1786 |
| BsrBI | CCGCTC | 1 cut(s) | 136 |
| BsrDI | GCAATG | 2 cut(s) | 514, 1254 |
| BsrFI | RCCGGY | 1 cut(s) | 112 |
| BsrGI | TGTACA | 1 cut(s) | 207 |
| BsrI | ACTGG | 4 cut(s) | 321, 356, 703, 1682 |
| BssAI | RCCGGY | 1 cut(s) | 112 |
| BssECI | CCNNGG | 2 cut(s) | 1111, 1144 |
| Bst2UI | CCWGG | 3 cut(s) | 608, 1052, 1145 |
| Bst4CI | ACNGT | 3 cut(s) | 1315, 1797, 1894 |
| Bst6I | CTCTTC | 4 cut(s) | 190, 1473, 1629, 1798 |
| BstAUI | TGTACA | 1 cut(s) | 207 |
| BstBAI | YACGTR | 1 cut(s) | 724 |
| BstC8I | GCNNGC | 8 cut(s) | 38, 84, 114, 269, 401, 660, 945, 1624 |
| BstDEI | CTNAG | 9 cut(s) | 53, 291, 503, 998, 1101, 1202, 1247, 1701, 1826 |
| BstF5I | GGATG | 2 cut(s) | 643, 1563 |
| BstFNI | CGCG | 1 cut(s) | 98 |
| BstHHI | GCGC | 2 cut(s) | 123, 1254 |
| BstMAI | GTCTC | 6 cut(s) | 51, 237, 584, 1374, 1669, 1771 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 79, 118, 1249 |
| BstNI | CCWGG | 3 cut(s) | 608, 1052, 1145 |
| BstNSI | RCATGY | 2 cut(s) | 579, 771 |
| BstSCI | CCNGG | 4 cut(s) | 138, 606, 1050, 1143 |
| BstSNI | TACGTA | 1 cut(s) | 724 |
| BstUI | CGCG | 1 cut(s) | 98 |
| BstV1I | GCAGC | 3 cut(s) | 430, 1383, 1657 |
| BstV2I | GAAGAC | 2 cut(s) | 157, 1614 |
| BstX2I | RGATCY | 5 cut(s) | 142, 586, 857, 1540, 1591 |
| BstYI | RGATCY | 5 cut(s) | 142, 586, 857, 1540, 1591 |
| Bsu15I | ATCGAT | 2 cut(s) | 616, 1080 |
| BsuRI | GGCC | 4 cut(s) | 153, 606, 1193, 1237 |
| BsuTUI | ATCGAT | 2 cut(s) | 616, 1080 |
| BtsCI | GGATG | 2 cut(s) | 643, 1563 |
| BtsI | GCAGTG | 1 cut(s) | 1129 |
| BtsIMutI | CAGTG | 5 cut(s) | 328, 349, 973, 1129, 1329 |
| Cac8I | GCNNGC | 8 cut(s) | 38, 84, 114, 269, 401, 660, 945, 1624 |
| CaiI | CAGNNNCTG | 1 cut(s) | 73 |
| CciI | TCATGA | 1 cut(s) | 369 |
| CfoI | GCGC | 2 cut(s) | 123, 1254 |
| Cfr10I | RCCGGY | 1 cut(s) | 112 |
| Cfr13I | GGNCC | 3 cut(s) | 993, 1141, 1235 |
| ClaI | ATCGAT | 2 cut(s) | 616, 1080 |
| Csp6I | GTAC | 5 cut(s) | 20, 208, 346, 721, 1737 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1569, 1604 |
| CviAII | CATG | 7 cut(s) | 370, 424, 576, 602, 768, 779, 1400 |
| CviQI | GTAC | 5 cut(s) | 20, 208, 346, 721, 1737 |
| DdeI | CTNAG | 9 cut(s) | 53, 291, 503, 998, 1101, 1202, 1247, 1701, 1826 |
| DraI | TTTAAA | 1 cut(s) | 633 |
| DraIII | CACNNNGTG | 1 cut(s) | 259 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 968 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1360 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 968 |
| Eam1104I | CTCTTC | 4 cut(s) | 190, 1473, 1629, 1798 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1360 |
| EarI | CTCTTC | 4 cut(s) | 190, 1473, 1629, 1798 |
| EciI | GGCGGA | 1 cut(s) | 464 |
| Eco105I | TACGTA | 1 cut(s) | 724 |
| Eco147I | AGGCCT | 1 cut(s) | 153 |
| Eco24I | GRGCYC | 2 cut(s) | 695, 929 |
| Eco32I | GATATC | 2 cut(s) | 367, 1486 |
| Eco47I | GGWCC | 2 cut(s) | 993, 1141 |
| Eco57I | CTGAAG | 6 cut(s) | 217, 218, 949, 1053, 1209, 1623 |
| Eco88I | CYCGRG | 1 cut(s) | 405 |
| EcoO109I | RGGNCCY | 1 cut(s) | 993 |
| EcoRI | GAATTC | 1 cut(s) | 1846 |
| EcoRII | CCWGG | 3 cut(s) | 606, 1050, 1143 |
| EcoRV | GATATC | 2 cut(s) | 367, 1486 |
| EcoT38I | GRGCYC | 2 cut(s) | 695, 929 |
| FaeI | CATG | 7 cut(s) | 373, 427, 579, 605, 771, 782, 1403 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1430, 1462 |
| FaqI | GGGAC | 2 cut(s) | 816, 979 |
| FatI | CATG | 7 cut(s) | 369, 423, 575, 601, 767, 778, 1399 |
| FauI | CCCGC | 1 cut(s) | 1748 |
| FauNDI | CATATG | 1 cut(s) | 1027 |
| FbaI | TGATCA | 1 cut(s) | 387 |
| Fnu4HI | GCNGC | 6 cut(s) | 134, 226, 444, 447, 1397, 1646 |
| FokI | GGATG | 2 cut(s) | 650, 1550 |
| FriOI | GRGCYC | 2 cut(s) | 695, 929 |
| Fsp4HI | GCNGC | 6 cut(s) | 134, 226, 444, 447, 1397, 1646 |
| FspBI | CTAG | 1 cut(s) | 216 |
| GlaI | GCGC | 2 cut(s) | 122, 1253 |
| GluI | GCNGC | 6 cut(s) | 134, 226, 444, 447, 1397, 1646 |
| GsaI | CCCAGC | 1 cut(s) | 1457 |
| GsuI | CTGGAG | 1 cut(s) | 1665 |
| HaeIII | GGCC | 4 cut(s) | 153, 606, 1193, 1237 |
| HapII | CCGG | 3 cut(s) | 31, 113, 139 |
| HhaI | GCGC | 2 cut(s) | 123, 1254 |
| Hin1II | CATG | 7 cut(s) | 373, 427, 579, 605, 771, 782, 1403 |
| Hin6I | GCGC | 2 cut(s) | 121, 1252 |
| HinP1I | GCGC | 2 cut(s) | 121, 1252 |
| HincII | GTYRAC | 2 cut(s) | 733, 1302 |
| HindII | GTYRAC | 2 cut(s) | 733, 1302 |
| HindIII | AAGCTT | 1 cut(s) | 314 |
| HinfI | GANTC | 7 cut(s) | 43, 302, 433, 682, 821, 1343, 1493 |
| HpaI | GTTAAC | 1 cut(s) | 1302 |
| HpaII | CCGG | 3 cut(s) | 31, 113, 139 |
| HphI | GGTGA | 3 cut(s) | 382, 945, 1716 |
| Hpy166II | GTNNAC | 7 cut(s) | 208, 210, 262, 415, 700, 733, 1302 |
| Hpy188III | TCNNGA | 8 cut(s) | 31, 370, 385, 407, 526, 791, 922, 1286 |
| Hpy8I | GTNNAC | 7 cut(s) | 208, 210, 262, 415, 700, 733, 1302 |
| Hpy99I | CGWCG | 1 cut(s) | 112 |
| HpyAV | CCTTC | 5 cut(s) | 998, 1233, 1324, 1727, 1890 |
| HpyCH4III | ACNGT | 3 cut(s) | 1315, 1797, 1894 |
| HpyCH4IV | ACGT | 1 cut(s) | 723 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 79, 118, 1249 |
| HpyF3I | CTNAG | 9 cut(s) | 53, 291, 503, 998, 1101, 1202, 1247, 1701, 1826 |
| HpySE526I | ACGT | 1 cut(s) | 723 |
| Hsp92II | CATG | 7 cut(s) | 373, 427, 579, 605, 771, 782, 1403 |
| HspAI | GCGC | 2 cut(s) | 121, 1252 |
| KflI | GGGWCCC | 1 cut(s) | 993 |
| Kpn2I | TCCGGA | 1 cut(s) | 30 |
| KpnI | GGTACC | 1 cut(s) | 1740 |
| KroI | GCCGGC | 1 cut(s) | 112 |
| KroNI | GCCGGC | 1 cut(s) | 114 |
| Ksp22I | TGATCA | 1 cut(s) | 387 |
| KspAI | GTTAAC | 1 cut(s) | 1302 |
| LmnI | GCTCC | 6 cut(s) | 33, 130, 141, 1019, 1270, 1642 |
| Lsp1109I | GCAGC | 3 cut(s) | 430, 1383, 1657 |
| LweI | GCATC | 4 cut(s) | 552, 645, 787, 1741 |
| MaeI | CTAG | 1 cut(s) | 216 |
| MaeII | ACGT | 1 cut(s) | 723 |
| MaeIII | GTNAC | 8 cut(s) | 75, 535, 621, 835, 1458, 1671, 1840, 1894 |
| MbiI | CCGCTC | 1 cut(s) | 136 |
| MfeI | CAATTG | 1 cut(s) | 957 |
| MflI | RGATCY | 5 cut(s) | 142, 586, 857, 1540, 1591 |
| MhlI | GDGCHC | 3 cut(s) | 695, 929, 1129 |
| MluCI | AATT | 9 cut(s) | 559, 874, 957, 1165, 1334, 1421, 1514, 1846, 1943 |
| MlyI | GAGTC | 2 cut(s) | 37, 427 |
| MmeI | TCCRAC | 4 cut(s) | 108, 868, 1243, 1568 |
| MroI | TCCGGA | 1 cut(s) | 30 |
| MroNI | GCCGGC | 1 cut(s) | 112 |
| MseI | TTAA | 8 cut(s) | 62, 632, 669, 810, 933, 1301, 1350, 1424 |
| MslI | CAYNNNNRTG | 1 cut(s) | 772 |
| MspA1I | CMGCKG | 2 cut(s) | 196, 1648 |
| MspI | CCGG | 3 cut(s) | 31, 113, 139 |
| MspR9I | CCNGG | 4 cut(s) | 140, 608, 1052, 1145 |
| MunI | CAATTG | 1 cut(s) | 957 |
| Mva1269I | GAATGC | 1 cut(s) | 281 |
| MvaI | CCWGG | 3 cut(s) | 608, 1052, 1145 |
| MvnI | CGCG | 1 cut(s) | 98 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 79, 118, 1249 |
| NaeI | GCCGGC | 1 cut(s) | 114 |
| NciI | CCSGG | 1 cut(s) | 140 |
| NdeI | CATATG | 1 cut(s) | 1027 |
| NgoMIV | GCCGGC | 1 cut(s) | 112 |
| NlaIII | CATG | 7 cut(s) | 373, 427, 579, 605, 771, 782, 1403 |
| NlaIV | GGNNCC | 6 cut(s) | 132, 651, 994, 995, 1738, 1788 |
| NmuCI | GTSAC | 4 cut(s) | 835, 1458, 1840, 1894 |
| NspI | RCATGY | 2 cut(s) | 579, 771 |
| PaeR7I | CTCGAG | 1 cut(s) | 405 |
| PagI | TCATGA | 1 cut(s) | 369 |
| PceI | AGGCCT | 1 cut(s) | 153 |
| PciI | ACATGT | 1 cut(s) | 575 |
| PctI | GAATGC | 1 cut(s) | 281 |
| PdiI | GCCGGC | 1 cut(s) | 114 |
| PfeI | GAWTC | 5 cut(s) | 302, 682, 821, 1343, 1493 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1057, 1150 |
| PfoI | TCCNGGA | 2 cut(s) | 138, 1050 |
| PkrI | GCNGC | 6 cut(s) | 135, 227, 445, 448, 1398, 1647 |
| PleI | GAGTC | 2 cut(s) | 37, 427 |
| PpsI | GAGTC | 2 cut(s) | 37, 427 |
| Ppu21I | YACGTR | 1 cut(s) | 724 |
| PpuMI | RGGWCCY | 1 cut(s) | 993 |
| PscI | ACATGT | 1 cut(s) | 575 |
| Psp5II | RGGWCCY | 1 cut(s) | 993 |
| Psp6I | CCWGG | 3 cut(s) | 606, 1050, 1143 |
| PspFI | CCCAGC | 1 cut(s) | 1453 |
| PspGI | CCWGG | 3 cut(s) | 606, 1050, 1143 |
| PspN4I | GGNNCC | 6 cut(s) | 132, 651, 994, 995, 1738, 1788 |
| PspPI | GGNCC | 3 cut(s) | 993, 1141, 1235 |
| PspPPI | RGGWCCY | 1 cut(s) | 993 |
| PstNI | CAGNNNCTG | 1 cut(s) | 73 |
| PsuI | RGATCY | 5 cut(s) | 142, 586, 857, 1540, 1591 |
| PvuII | CAGCTG | 2 cut(s) | 196, 1648 |
| RsaI | GTAC | 5 cut(s) | 21, 209, 347, 722, 1738 |
| RsaNI | GTAC | 5 cut(s) | 20, 208, 346, 721, 1737 |
| RseI | CAYNNNNRTG | 1 cut(s) | 772 |
| SaqAI | TTAA | 8 cut(s) | 62, 632, 669, 810, 933, 1301, 1350, 1424 |
| SatI | GCNGC | 6 cut(s) | 134, 226, 444, 447, 1397, 1646 |
| Sau96I | GGNCC | 3 cut(s) | 993, 1141, 1235 |
| SchI | GAGTC | 2 cut(s) | 37, 427 |
| ScrFI | CCNGG | 4 cut(s) | 140, 608, 1052, 1145 |
| SduI | GDGCHC | 3 cut(s) | 695, 929, 1129 |
| SfaNI | GCATC | 4 cut(s) | 552, 645, 787, 1741 |
| Sfr274I | CTCGAG | 1 cut(s) | 405 |
| SinI | GGWCC | 2 cut(s) | 993, 1141 |
| SlaI | CTCGAG | 1 cut(s) | 405 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 772 |
| SmlI | CTYRAG | 4 cut(s) | 405, 938, 1762, 1781 |
| SmoI | CTYRAG | 4 cut(s) | 405, 938, 1762, 1781 |
| SnaBI | TACGTA | 1 cut(s) | 724 |
| Sse9I | AATT | 9 cut(s) | 559, 874, 957, 1165, 1334, 1421, 1514, 1846, 1943 |
| SseBI | AGGCCT | 1 cut(s) | 153 |
| SsiI | CCGC | 5 cut(s) | 134, 225, 446, 449, 1741 |
| SspMI | CTAG | 1 cut(s) | 216 |
| StuI | AGGCCT | 1 cut(s) | 153 |
| StyD4I | CCNGG | 4 cut(s) | 138, 606, 1050, 1143 |
| TaaI | ACNGT | 3 cut(s) | 1315, 1797, 1894 |
| TaiI | ACGT | 1 cut(s) | 726 |
| TaqI | TCGA | 5 cut(s) | 24, 406, 616, 1043, 1080 |
| TasI | AATT | 9 cut(s) | 559, 874, 957, 1165, 1334, 1421, 1514, 1846, 1943 |
| TatI | WGTACW | 2 cut(s) | 19, 207 |
| TauI | GCSGC | 3 cut(s) | 136, 228, 449 |
| TfiI | GAWTC | 5 cut(s) | 302, 682, 821, 1343, 1493 |
| Tru1I | TTAA | 8 cut(s) | 62, 632, 669, 810, 933, 1301, 1350, 1424 |
| Tru9I | TTAA | 8 cut(s) | 62, 632, 669, 810, 933, 1301, 1350, 1424 |
| TscAI | CASTG | 5 cut(s) | 328, 356, 973, 1129, 1329 |
| TseFI | GTSAC | 4 cut(s) | 835, 1458, 1840, 1894 |
| TseI | GCWGC | 3 cut(s) | 443, 1396, 1645 |
| Tsp45I | GTSAC | 4 cut(s) | 835, 1458, 1840, 1894 |
| TspDTI | ATGAA | 3 cut(s) | 351, 1014, 1506 |
| TspGWI | ACGGA | 1 cut(s) | 1336 |
| TspRI | CASTG | 5 cut(s) | 328, 356, 973, 1129, 1329 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1057, 1150 |
| VpaK11BI | GGWCC | 2 cut(s) | 993, 1141 |
| XapI | RAATTY | 5 cut(s) | 874, 1334, 1514, 1846, 1943 |
| XceI | RCATGY | 2 cut(s) | 579, 771 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 743 |
| XhoI | CTCGAG | 1 cut(s) | 405 |
| XspI | CTAG | 1 cut(s) | 216 |