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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G07380 AT5G07380 AT5G07380 AT5G07380 AT5G07380 AT5G07380 |
| fragaria_vesca | FvH4_5g10000 FvH4_5g10000 FvH4_5g10000 FvH4_5g10000 |
| malus_domestica | MD06G1128600.v1.1 |
| prunus_persica | Prupe.5G138400_v2.0.a1 Prupe.5G138400_v2.0.a1 Prupe.5G138400_v2.0.a1 |
| pyrus_communis | pycom06g11900 |
| rosa_chinensis | RchiOBHm_Chr7g0188261 |
| rosa_laevigata | RLG00000004713 |
| rosa_multiflora | Rmu_sc0008750.1_g000010 |
| rosa_roxburghii | Rroxscaffold_3G00266550 |
| rosa_rugosa | Rorug06G0489500 |
| rosa_samantha | Rh7AG093900 Rh7BG095300 Rh7CG095700 Rh7DG095900 |
| rosa_wichuraiana | Rw7G008090 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1013 |
| AarI | CACCTGC | 1 cut(s) | 1832 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 828, 968 |
| Acc36I | ACCTGC | 1 cut(s) | 1832 |
| AccB1I | GGYRCC | 1 cut(s) | 1774 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1150, 1900 |
| AccI | GTMKAC | 1 cut(s) | 207 |
| AccII | CGCG | 2 cut(s) | 86, 1254 |
| AciI | CCGC | 3 cut(s) | 225, 446, 1715 |
| AclWI | GGATC | 1 cut(s) | 1270 |
| AcoI | YGGCCR | 1 cut(s) | 1902 |
| AcsI | RAATTY | 5 cut(s) | 874, 1505, 1531, 1834, 1927 |
| AcuI | CTGAAG | 3 cut(s) | 218, 1209, 1296 |
| AcyI | GRCGYC | 1 cut(s) | 1740 |
| AfaI | GTAC | 5 cut(s) | 21, 347, 597, 722, 1524 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 117, 278, 355, 839, 1150, 1721, 1900 |
| AflIII | ACRYGT | 2 cut(s) | 539, 857 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1351 |
| AjnI | CCWGG | 1 cut(s) | 606 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1689, 1721 |
| AleI | CACNNNNGTG | 1 cut(s) | 1826 |
| Alw21I | GWGCWC | 2 cut(s) | 1129, 1888 |
| Alw26I | GTCTC | 4 cut(s) | 51, 848, 1365, 1654 |
| AlwI | GGATC | 1 cut(s) | 1270 |
| Ama87I | CYCGRG | 2 cut(s) | 405, 938 |
| AoxI | GGCC | 5 cut(s) | 151, 604, 1191, 1235, 1902 |
| ApeKI | GCWGC | 4 cut(s) | 79, 443, 1387, 1732 |
| ApoI | RAATTY | 5 cut(s) | 874, 1505, 1531, 1834, 1927 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 507, 539 |
| AspLEI | GCGC | 2 cut(s) | 123, 1254 |
| AspS9I | GGNCC | 5 cut(s) | 25, 325, 821, 1141, 1235 |
| AsuHPI | GGTGA | 2 cut(s) | 1528, 1704 |
| AvaI | CYCGRG | 2 cut(s) | 405, 938 |
| AvaII | GGWCC | 4 cut(s) | 25, 325, 821, 1141 |
| AxyI | CCTNAGG | 1 cut(s) | 62 |
| BalI | TGGCCA | 1 cut(s) | 1904 |
| BanI | GGYRCC | 1 cut(s) | 1774 |
| BanII | GRGCYC | 1 cut(s) | 695 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 191, 223, 639, 671 |
| BbsI | GAAGAC | 1 cut(s) | 1602 |
| Bbv12I | GWGCWC | 2 cut(s) | 1129, 1888 |
| BbvI | GCAGC | 4 cut(s) | 91, 430, 1374, 1744 |
| BccI | CCATC | 5 cut(s) | 612, 740, 1048, 1413, 1715 |
| BceAI | ACGGC | 1 cut(s) | 242 |
| BciT130I | CCWGG | 1 cut(s) | 608 |
| BclI | TGATCA | 1 cut(s) | 1081 |
| BcoDI | GTCTC | 4 cut(s) | 51, 848, 1365, 1654 |
| BfaI | CTAG | 2 cut(s) | 1577, 1691 |
| BfuAI | ACCTGC | 1 cut(s) | 1832 |
| BisI | GCNGC | 5 cut(s) | 80, 444, 447, 1388, 1733 |
| BlsI | GCNGC | 5 cut(s) | 81, 445, 448, 1389, 1734 |
| BmcAI | AGTACT | 1 cut(s) | 597 |
| Bme1390I | CCNGG | 1 cut(s) | 608 |
| Bme18I | GGWCC | 4 cut(s) | 25, 325, 821, 1141 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1351 |
| BmeT110I | CYCGRG | 2 cut(s) | 405, 938 |
| BmgT120I | GGNCC | 5 cut(s) | 25, 325, 821, 1141, 1235 |
| BmiI | GGNNCC | 2 cut(s) | 822, 1776 |
| BmrFI | CCNGG | 1 cut(s) | 608 |
| BmsI | GCATC | 2 cut(s) | 787, 1374 |
| BpiI | GAAGAC | 1 cut(s) | 1602 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1553, 1585 |
| BpmI | CTGGAG | 2 cut(s) | 1053, 1650 |
| BpuEI | CTTGAG | 3 cut(s) | 872, 1735, 1790 |
| BsaAI | YACGTR | 1 cut(s) | 242 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1293 |
| BsaHI | GRCGYC | 1 cut(s) | 1740 |
| BsaI | GGTCTC | 1 cut(s) | 51 |
| BsaJI | CCNNGG | 3 cut(s) | 321, 1111, 1899 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 117, 278, 355, 839, 1150, 1721, 1900 |
| Bse118I | RCCGGY | 1 cut(s) | 1728 |
| Bse1I | ACTGG | 6 cut(s) | 27, 349, 833, 1143, 1144, 1667 |
| Bse21I | CCTNAGG | 1 cut(s) | 62 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1293 |
| BseBI | CCWGG | 1 cut(s) | 608 |
| BseDI | CCNNGG | 3 cut(s) | 321, 1111, 1899 |
| BseGI | GGATG | 1 cut(s) | 643 |
| BseJI | GATNNNNATC | 1 cut(s) | 1293 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 117, 278, 355, 839, 1150, 1721, 1900 |
| BseMII | CTCAG | 7 cut(s) | 67, 151, 305, 517, 1261, 1584, 1644 |
| BseNI | ACTGG | 6 cut(s) | 27, 349, 833, 1143, 1144, 1667 |
| BseXI | GCAGC | 4 cut(s) | 91, 430, 1374, 1744 |
| BseYI | CCCAGC | 2 cut(s) | 1497, 1872 |
| Bsh1236I | CGCG | 2 cut(s) | 86, 1254 |
| BshFI | GGCC | 5 cut(s) | 153, 606, 1193, 1237, 1904 |
| BshNI | GGYRCC | 1 cut(s) | 1774 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1129, 1888 |
| BsiHKCI | CYCGRG | 2 cut(s) | 405, 938 |
| BsiSI | CCGG | 1 cut(s) | 1729 |
| BslFI | GGGAC | 2 cut(s) | 834, 1855 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 117, 278, 355, 839, 1150, 1721, 1900 |
| BsmAI | GTCTC | 4 cut(s) | 51, 848, 1365, 1654 |
| BsmFI | GGGAC | 2 cut(s) | 834, 1855 |
| BsnI | GGCC | 5 cut(s) | 153, 606, 1193, 1237, 1904 |
| Bso31I | GGTCTC | 1 cut(s) | 51 |
| BsoBI | CYCGRG | 2 cut(s) | 405, 938 |
| Bsp1286I | GDGCHC | 3 cut(s) | 695, 1129, 1888 |
| Bsp1407I | TGTACA | 2 cut(s) | 720, 1522 |
| Bsp143I | GATC | 9 cut(s) | 142, 201, 294, 334, 420, 550, 1081, 1262, 1288 |
| Bsp19I | CCATGG | 1 cut(s) | 1899 |
| Bsp68I | TCGCGA | 1 cut(s) | 86 |
| BspACI | CCGC | 3 cut(s) | 225, 446, 1715 |
| BspANI | GGCC | 5 cut(s) | 153, 606, 1193, 1237, 1904 |
| BspCNI | CTCAG | 7 cut(s) | 66, 150, 304, 516, 1260, 1583, 1645 |
| BspFNI | CGCG | 2 cut(s) | 86, 1254 |
| BspHI | TCATGA | 1 cut(s) | 369 |
| BspLI | GGNNCC | 2 cut(s) | 822, 1776 |
| BspMI | ACCTGC | 1 cut(s) | 1832 |
| BspPI | GGATC | 1 cut(s) | 1270 |
| BspT107I | GGYRCC | 1 cut(s) | 1774 |
| BspTNI | GGTCTC | 1 cut(s) | 51 |
| BsrFI | RCCGGY | 1 cut(s) | 1728 |
| BsrGI | TGTACA | 2 cut(s) | 720, 1522 |
| BsrI | ACTGG | 6 cut(s) | 27, 349, 833, 1143, 1144, 1667 |
| BssAI | RCCGGY | 1 cut(s) | 1728 |
| BssECI | CCNNGG | 3 cut(s) | 321, 1111, 1899 |
| BssMI | GATC | 9 cut(s) | 142, 201, 294, 334, 420, 550, 1081, 1262, 1288 |
| BssNAI | GTATAC | 1 cut(s) | 208 |
| BssNI | GRCGYC | 1 cut(s) | 1740 |
| BssT1I | CCWWGG | 2 cut(s) | 1111, 1899 |
| Bst1107I | GTATAC | 1 cut(s) | 208 |
| Bst2UI | CCWGG | 1 cut(s) | 608 |
| Bst4CI | ACNGT | 4 cut(s) | 325, 1205, 1443, 1785 |
| Bst6I | CTCTTC | 1 cut(s) | 1617 |
| BstACI | GRCGYC | 1 cut(s) | 1740 |
| BstAUI | TGTACA | 2 cut(s) | 720, 1522 |
| BstBAI | YACGTR | 1 cut(s) | 242 |
| BstC8I | GCNNGC | 7 cut(s) | 38, 84, 273, 769, 945, 1191, 1612 |
| BstDEI | CTNAG | 9 cut(s) | 53, 62, 137, 291, 503, 998, 1247, 1570, 1653 |
| BstDSI | CCRYGG | 2 cut(s) | 321, 1899 |
| BstEII | GGTNACC | 1 cut(s) | 1724 |
| BstF5I | GGATG | 1 cut(s) | 643 |
| BstFNI | CGCG | 2 cut(s) | 86, 1254 |
| BstHHI | GCGC | 2 cut(s) | 123, 1254 |
| BstKTI | GATC | 9 cut(s) | 145, 204, 297, 337, 423, 553, 1084, 1265, 1291 |
| BstMAI | GTCTC | 4 cut(s) | 51, 848, 1365, 1654 |
| BstMBI | GATC | 9 cut(s) | 142, 201, 294, 334, 420, 550, 1081, 1262, 1288 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 79, 699, 1249, 1774 |
| BstNI | CCWGG | 1 cut(s) | 608 |
| BstNSI | RCATGY | 4 cut(s) | 543, 771, 861, 1283 |
| BstPI | GGTNACC | 1 cut(s) | 1724 |
| BstSCI | CCNGG | 1 cut(s) | 606 |
| BstUI | CGCG | 2 cut(s) | 86, 1254 |
| BstV1I | GCAGC | 4 cut(s) | 91, 430, 1374, 1744 |
| BstV2I | GAAGAC | 1 cut(s) | 1602 |
| BstZ17I | GTATAC | 1 cut(s) | 208 |
| Bsu36I | CCTNAGG | 1 cut(s) | 62 |
| BsuRI | GGCC | 5 cut(s) | 153, 606, 1193, 1237, 1904 |
| BtgI | CCRYGG | 2 cut(s) | 321, 1899 |
| BtsCI | GGATG | 1 cut(s) | 643 |
| BtsI | GCAGTG | 1 cut(s) | 1129 |
| BtsIMutI | CAGTG | 4 cut(s) | 356, 1129, 1136, 1151 |
| BtuMI | TCGCGA | 1 cut(s) | 86 |
| BveI | ACCTGC | 1 cut(s) | 1832 |
| Cac8I | GCNNGC | 7 cut(s) | 38, 84, 273, 769, 945, 1191, 1612 |
| CciI | TCATGA | 1 cut(s) | 369 |
| CfoI | GCGC | 2 cut(s) | 123, 1254 |
| Cfr10I | RCCGGY | 1 cut(s) | 1728 |
| Cfr13I | GGNCC | 5 cut(s) | 25, 325, 821, 1141, 1235 |
| CseI | GACGC | 1 cut(s) | 1748 |
| Csp6I | GTAC | 5 cut(s) | 20, 346, 596, 721, 1523 |
| CviQI | GTAC | 5 cut(s) | 20, 346, 596, 721, 1523 |
| DdeI | CTNAG | 9 cut(s) | 53, 62, 137, 291, 503, 998, 1247, 1570, 1653 |
| DpnI | GATC | 9 cut(s) | 144, 203, 296, 336, 422, 552, 1083, 1264, 1290 |
| DpnII | GATC | 9 cut(s) | 142, 201, 294, 334, 420, 550, 1081, 1262, 1288 |
| DraI | TTTAAA | 1 cut(s) | 633 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 828, 968 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1351 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 828, 968 |
| EaeI | YGGCCR | 1 cut(s) | 1902 |
| Eam1104I | CTCTTC | 1 cut(s) | 1617 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1351 |
| EarI | CTCTTC | 1 cut(s) | 1617 |
| Eco130I | CCWWGG | 2 cut(s) | 1111, 1899 |
| Eco147I | AGGCCT | 1 cut(s) | 153 |
| Eco24I | GRGCYC | 1 cut(s) | 695 |
| Eco31I | GGTCTC | 1 cut(s) | 51 |
| Eco32I | GATATC | 1 cut(s) | 367 |
| Eco47I | GGWCC | 4 cut(s) | 25, 325, 821, 1141 |
| Eco57I | CTGAAG | 3 cut(s) | 218, 1209, 1296 |
| Eco81I | CCTNAGG | 1 cut(s) | 62 |
| Eco88I | CYCGRG | 2 cut(s) | 405, 938 |
| Eco91I | GGTNACC | 1 cut(s) | 1724 |
| EcoO109I | RGGNCCY | 1 cut(s) | 821 |
| EcoO65I | GGTNACC | 1 cut(s) | 1724 |
| EcoRII | CCWGG | 1 cut(s) | 606 |
| EcoRV | GATATC | 1 cut(s) | 367 |
| EcoT14I | CCWWGG | 2 cut(s) | 1111, 1899 |
| EcoT38I | GRGCYC | 1 cut(s) | 695 |
| ErhI | CCWWGG | 2 cut(s) | 1111, 1899 |
| FaqI | GGGAC | 2 cut(s) | 834, 1855 |
| FbaI | TGATCA | 1 cut(s) | 1081 |
| FblI | GTMKAC | 1 cut(s) | 207 |
| Fnu4HI | GCNGC | 5 cut(s) | 80, 444, 447, 1388, 1733 |
| FokI | GGATG | 1 cut(s) | 650 |
| FriOI | GRGCYC | 1 cut(s) | 695 |
| Fsp4HI | GCNGC | 5 cut(s) | 80, 444, 447, 1388, 1733 |
| FspBI | CTAG | 2 cut(s) | 1577, 1691 |
| GlaI | GCGC | 2 cut(s) | 122, 1253 |
| GluI | GCNGC | 5 cut(s) | 80, 444, 447, 1388, 1733 |
| GsaI | CCCAGC | 2 cut(s) | 1501, 1876 |
| GsuI | CTGGAG | 2 cut(s) | 1053, 1650 |
| HaeIII | GGCC | 5 cut(s) | 153, 606, 1193, 1237, 1904 |
| HapII | CCGG | 1 cut(s) | 1729 |
| HgaI | GACGC | 1 cut(s) | 1748 |
| HhaI | GCGC | 2 cut(s) | 123, 1254 |
| Hin1I | GRCGYC | 1 cut(s) | 1740 |
| Hin6I | GCGC | 2 cut(s) | 121, 1252 |
| HinP1I | GCGC | 2 cut(s) | 121, 1252 |
| HincII | GTYRAC | 2 cut(s) | 262, 526 |
| HindII | GTYRAC | 2 cut(s) | 262, 526 |
| HindIII | AAGCTT | 2 cut(s) | 229, 1634 |
| HpaI | GTTAAC | 1 cut(s) | 262 |
| HpaII | CCGG | 1 cut(s) | 1729 |
| HphI | GGTGA | 2 cut(s) | 1528, 1704 |
| Hpy166II | GTNNAC | 5 cut(s) | 208, 262, 415, 526, 613 |
| Hpy8I | GTNNAC | 5 cut(s) | 208, 262, 415, 526, 613 |
| Hpy99I | CGWCG | 2 cut(s) | 302, 1742 |
| HpyAV | CCTTC | 5 cut(s) | 514, 834, 998, 1233, 1315 |
| HpyCH4III | ACNGT | 4 cut(s) | 325, 1205, 1443, 1785 |
| HpyCH4IV | ACGT | 2 cut(s) | 162, 241 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 79, 699, 1249, 1774 |
| HpyF3I | CTNAG | 9 cut(s) | 53, 62, 137, 291, 503, 998, 1247, 1570, 1653 |
| HpySE526I | ACGT | 2 cut(s) | 162, 241 |
| Hsp92I | GRCGYC | 1 cut(s) | 1740 |
| HspAI | GCGC | 2 cut(s) | 121, 1252 |
| Ksp22I | TGATCA | 1 cut(s) | 1081 |
| KspAI | GTTAAC | 1 cut(s) | 262 |
| Kzo9I | GATC | 9 cut(s) | 142, 201, 294, 334, 420, 550, 1081, 1262, 1288 |
| LmnI | GCTCC | 3 cut(s) | 33, 569, 1891 |
| Lsp1109I | GCAGC | 4 cut(s) | 91, 430, 1374, 1744 |
| LweI | GCATC | 2 cut(s) | 787, 1374 |
| MaeI | CTAG | 2 cut(s) | 1577, 1691 |
| MaeII | ACGT | 2 cut(s) | 162, 241 |
| MaeIII | GTNAC | 4 cut(s) | 242, 835, 865, 1724 |
| MalI | GATC | 9 cut(s) | 144, 203, 296, 336, 422, 552, 1083, 1264, 1290 |
| MboI | GATC | 9 cut(s) | 142, 201, 294, 334, 420, 550, 1081, 1262, 1288 |
| MhlI | GDGCHC | 3 cut(s) | 695, 1129, 1888 |
| MlsI | TGGCCA | 1 cut(s) | 1904 |
| MluNI | TGGCCA | 1 cut(s) | 1904 |
| MlyI | GAGTC | 6 cut(s) | 140, 226, 410, 822, 1340, 1877 |
| MmeI | TCCRAC | 1 cut(s) | 868 |
| Mox20I | TGGCCA | 1 cut(s) | 1904 |
| MscI | TGGCCA | 1 cut(s) | 1904 |
| MseI | TTAA | 7 cut(s) | 261, 632, 669, 1301, 1341, 1415, 1553 |
| MslI | CAYNNNNRTG | 3 cut(s) | 437, 772, 1826 |
| Msp20I | TGGCCA | 1 cut(s) | 1904 |
| MspI | CCGG | 1 cut(s) | 1729 |
| MspR9I | CCNGG | 1 cut(s) | 608 |
| MvaI | CCWGG | 1 cut(s) | 608 |
| MvnI | CGCG | 2 cut(s) | 86, 1254 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 79, 699, 1249, 1774 |
| NcoI | CCATGG | 1 cut(s) | 1899 |
| NdeII | GATC | 9 cut(s) | 142, 201, 294, 334, 420, 550, 1081, 1262, 1288 |
| NlaIV | GGNNCC | 2 cut(s) | 822, 1776 |
| NmeAIII | GCCGAG | 1 cut(s) | 240 |
| NmuCI | GTSAC | 3 cut(s) | 242, 835, 865 |
| NruI | TCGCGA | 1 cut(s) | 86 |
| NspI | RCATGY | 4 cut(s) | 543, 771, 861, 1283 |
| OliI | CACNNNNGTG | 1 cut(s) | 1826 |
| PaeI | GCATGC | 1 cut(s) | 771 |
| PaeR7I | CTCGAG | 2 cut(s) | 405, 938 |
| PagI | TCATGA | 1 cut(s) | 369 |
| PaqCI | CACCTGC | 1 cut(s) | 1832 |
| PceI | AGGCCT | 1 cut(s) | 153 |
| PciI | ACATGT | 2 cut(s) | 539, 857 |
| PfeI | GAWTC | 4 cut(s) | 88, 302, 1036, 1796 |
| PflFI | GACNNNGTC | 1 cut(s) | 112 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1150, 1900 |
| PkrI | GCNGC | 5 cut(s) | 81, 445, 448, 1389, 1734 |
| PleI | GAGTC | 6 cut(s) | 139, 225, 410, 821, 1340, 1876 |
| PpsI | GAGTC | 6 cut(s) | 139, 225, 410, 821, 1340, 1876 |
| Ppu21I | YACGTR | 1 cut(s) | 242 |
| PpuMI | RGGWCCY | 1 cut(s) | 821 |
| PscI | ACATGT | 2 cut(s) | 539, 857 |
| PsiI | TTATAA | 1 cut(s) | 1013 |
| Psp5II | RGGWCCY | 1 cut(s) | 821 |
| Psp6I | CCWGG | 1 cut(s) | 606 |
| PspEI | GGTNACC | 1 cut(s) | 1724 |
| PspFI | CCCAGC | 2 cut(s) | 1497, 1872 |
| PspGI | CCWGG | 1 cut(s) | 606 |
| PspN4I | GGNNCC | 2 cut(s) | 822, 1776 |
| PspPI | GGNCC | 5 cut(s) | 25, 325, 821, 1141, 1235 |
| PspPPI | RGGWCCY | 1 cut(s) | 821 |
| PspXI | VCTCGAGB | 1 cut(s) | 938 |
| PsyI | GACNNNGTC | 1 cut(s) | 112 |
| RruI | TCGCGA | 1 cut(s) | 86 |
| RsaI | GTAC | 5 cut(s) | 21, 347, 597, 722, 1524 |
| RsaNI | GTAC | 5 cut(s) | 20, 346, 596, 721, 1523 |
| RseI | CAYNNNNRTG | 3 cut(s) | 437, 772, 1826 |
| SaqAI | TTAA | 7 cut(s) | 261, 632, 669, 1301, 1341, 1415, 1553 |
| SatI | GCNGC | 5 cut(s) | 80, 444, 447, 1388, 1733 |
| Sau3AI | GATC | 9 cut(s) | 142, 201, 294, 334, 420, 550, 1081, 1262, 1288 |
| Sau96I | GGNCC | 5 cut(s) | 25, 325, 821, 1141, 1235 |
| ScaI | AGTACT | 1 cut(s) | 597 |
| SchI | GAGTC | 6 cut(s) | 140, 226, 410, 822, 1340, 1877 |
| ScrFI | CCNGG | 1 cut(s) | 608 |
| SduI | GDGCHC | 3 cut(s) | 695, 1129, 1888 |
| SfaNI | GCATC | 2 cut(s) | 787, 1374 |
| Sfr274I | CTCGAG | 2 cut(s) | 405, 938 |
| SinI | GGWCC | 4 cut(s) | 25, 325, 821, 1141 |
| SlaI | CTCGAG | 2 cut(s) | 405, 938 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 437, 772, 1826 |
| SmlI | CTYRAG | 5 cut(s) | 405, 851, 938, 1750, 1769 |
| SmoI | CTYRAG | 5 cut(s) | 405, 851, 938, 1750, 1769 |
| SphI | GCATGC | 1 cut(s) | 771 |
| SseBI | AGGCCT | 1 cut(s) | 153 |
| SsiI | CCGC | 3 cut(s) | 225, 446, 1715 |
| SspI | AATATT | 2 cut(s) | 742, 1099 |
| SspMI | CTAG | 2 cut(s) | 1577, 1691 |
| StuI | AGGCCT | 1 cut(s) | 153 |
| StyD4I | CCNGG | 1 cut(s) | 606 |
| StyI | CCWWGG | 2 cut(s) | 1111, 1899 |
| TaaI | ACNGT | 4 cut(s) | 325, 1205, 1443, 1785 |
| TaiI | ACGT | 2 cut(s) | 165, 244 |
| TaqI | TCGA | 8 cut(s) | 107, 297, 406, 419, 816, 939, 1737, 1866 |
| TatI | WGTACW | 4 cut(s) | 19, 595, 720, 1522 |
| TauI | GCSGC | 1 cut(s) | 449 |
| TfiI | GAWTC | 4 cut(s) | 88, 302, 1036, 1796 |
| Tru1I | TTAA | 7 cut(s) | 261, 632, 669, 1301, 1341, 1415, 1553 |
| Tru9I | TTAA | 7 cut(s) | 261, 632, 669, 1301, 1341, 1415, 1553 |
| TscAI | CASTG | 4 cut(s) | 356, 1129, 1143, 1151 |
| TseFI | GTSAC | 3 cut(s) | 242, 835, 865 |
| TseI | GCWGC | 4 cut(s) | 79, 443, 1387, 1732 |
| Tsp45I | GTSAC | 3 cut(s) | 242, 835, 865 |
| TspDTI | ATGAA | 3 cut(s) | 93, 947, 1934 |
| TspGWI | ACGGA | 2 cut(s) | 46, 143 |
| TspRI | CASTG | 4 cut(s) | 356, 1129, 1143, 1151 |
| Tth111I | GACNNNGTC | 1 cut(s) | 112 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1150, 1900 |
| VpaK11BI | GGWCC | 4 cut(s) | 25, 325, 821, 1141 |
| XapI | RAATTY | 5 cut(s) | 874, 1505, 1531, 1834, 1927 |
| XceI | RCATGY | 4 cut(s) | 543, 771, 861, 1283 |
| XhoI | CTCGAG | 2 cut(s) | 405, 938 |
| XmiI | GTMKAC | 1 cut(s) | 207 |
| XspI | CTAG | 2 cut(s) | 1577, 1691 |
| ZrmI | AGTACT | 1 cut(s) | 597 |