Thylakoid lumenal 17.9 kDa protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G24930 |
| fragaria_vesca | FvH4_5g08420 |
| malus_domestica | MD06G1140800.v1.1 |
| prunus_persica | Prupe.5G150000_v2.0.a1 |
| pyrus_communis | pycom06g13070 |
| rosa_chinensis | RchiOBHm_Chr7g0190021 |
| rosa_laevigata | RLG00000004571 |
| rosa_roxburghii | Rroxscaffold_3G00264950 |
| rosa_rugosa | Rorug06G0501700 |
| rosa_samantha | Rh7AG107200 Rh7BG109500 Rh7CG111800 Rh7DG110200 |
| rosa_wichuraiana | Rw7G009250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 637 |
| AciI | CCGC | 1 cut(s) | 637 |
| AcoI | YGGCCR | 2 cut(s) | 3, 570 |
| AcsI | RAATTY | 5 cut(s) | 268, 287, 385, 450, 616 |
| AfaI | GTAC | 2 cut(s) | 560, 593 |
| AgsI | TTSAA | 5 cut(s) | 19, 274, 287, 415, 686 |
| AjnI | CCWGG | 1 cut(s) | 322 |
| AjuI | GAANNNNNNNTTGG | 3 cut(s) | 31, 533, 565 |
| AluBI | AGCT | 3 cut(s) | 15, 158, 494 |
| AluI | AGCT | 3 cut(s) | 15, 158, 494 |
| Alw26I | GTCTC | 2 cut(s) | 149, 540 |
| AoxI | GGCC | 4 cut(s) | 3, 261, 280, 570 |
| ApoI | RAATTY | 5 cut(s) | 268, 287, 385, 450, 616 |
| AsuHPI | GGTGA | 2 cut(s) | 171, 550 |
| BalI | TGGCCA | 2 cut(s) | 5, 572 |
| BbsI | GAAGAC | 1 cut(s) | 281 |
| BccI | CCATC | 3 cut(s) | 319, 470, 497 |
| BciT130I | CCWGG | 1 cut(s) | 324 |
| BcoDI | GTCTC | 2 cut(s) | 149, 540 |
| BfaI | CTAG | 3 cut(s) | 141, 155, 611 |
| Bme1390I | CCNGG | 1 cut(s) | 324 |
| BmrFI | CCNGG | 1 cut(s) | 324 |
| BpiI | GAAGAC | 1 cut(s) | 281 |
| Bsa29I | ATCGAT | 1 cut(s) | 314 |
| BsaBI | GATNNNNATC | 1 cut(s) | 352 |
| BsaJI | CCNNGG | 1 cut(s) | 690 |
| Bse1I | ACTGG | 3 cut(s) | 102, 283, 658 |
| Bse3DI | GCAATG | 1 cut(s) | 79 |
| Bse8I | GATNNNNATC | 1 cut(s) | 352 |
| BseBI | CCWGG | 1 cut(s) | 324 |
| BseCI | ATCGAT | 1 cut(s) | 314 |
| BseDI | CCNNGG | 1 cut(s) | 690 |
| BseGI | GGATG | 2 cut(s) | 526, 645 |
| BseJI | GATNNNNATC | 1 cut(s) | 352 |
| BseMI | GCAATG | 1 cut(s) | 79 |
| BseMII | CTCAG | 3 cut(s) | 230, 272, 486 |
| BseNI | ACTGG | 3 cut(s) | 102, 283, 658 |
| BseRI | GAGGAG | 3 cut(s) | 137, 225, 228 |
| BshFI | GGCC | 4 cut(s) | 5, 263, 282, 572 |
| BshVI | ATCGAT | 1 cut(s) | 314 |
| BslFI | GGGAC | 1 cut(s) | 639 |
| BsmAI | GTCTC | 2 cut(s) | 149, 540 |
| BsmFI | GGGAC | 1 cut(s) | 639 |
| BsnI | GGCC | 4 cut(s) | 5, 263, 282, 572 |
| Bsp143I | GATC | 2 cut(s) | 347, 456 |
| Bsp19I | CCATGG | 1 cut(s) | 690 |
| BspACI | CCGC | 1 cut(s) | 637 |
| BspANI | GGCC | 4 cut(s) | 5, 263, 282, 572 |
| BspCNI | CTCAG | 3 cut(s) | 229, 271, 487 |
| BspDI | ATCGAT | 1 cut(s) | 314 |
| BspQI | GCTCTTC | 1 cut(s) | 627 |
| BsrBI | CCGCTC | 1 cut(s) | 637 |
| BsrDI | GCAATG | 1 cut(s) | 79 |
| BsrI | ACTGG | 3 cut(s) | 102, 283, 658 |
| BssECI | CCNNGG | 1 cut(s) | 690 |
| BssMI | GATC | 2 cut(s) | 347, 456 |
| BssT1I | CCWWGG | 1 cut(s) | 690 |
| Bst2UI | CCWGG | 1 cut(s) | 324 |
| Bst4CI | ACNGT | 1 cut(s) | 166 |
| Bst6I | CTCTTC | 1 cut(s) | 627 |
| BstDEI | CTNAG | 3 cut(s) | 216, 258, 495 |
| BstDSI | CCRYGG | 1 cut(s) | 690 |
| BstF5I | GGATG | 2 cut(s) | 526, 645 |
| BstKTI | GATC | 2 cut(s) | 350, 459 |
| BstMAI | GTCTC | 2 cut(s) | 149, 540 |
| BstMBI | GATC | 2 cut(s) | 347, 456 |
| BstNI | CCWGG | 1 cut(s) | 324 |
| BstSCI | CCNGG | 1 cut(s) | 322 |
| BstV2I | GAAGAC | 1 cut(s) | 281 |
| Bsu15I | ATCGAT | 1 cut(s) | 314 |
| BsuRI | GGCC | 4 cut(s) | 5, 263, 282, 572 |
| BsuTUI | ATCGAT | 1 cut(s) | 314 |
| BtgI | CCRYGG | 1 cut(s) | 690 |
| BtsCI | GGATG | 2 cut(s) | 526, 645 |
| BtsIMutI | CAGTG | 1 cut(s) | 162 |
| ClaI | ATCGAT | 1 cut(s) | 314 |
| Csp6I | GTAC | 2 cut(s) | 559, 592 |
| CviAII | CATG | 3 cut(s) | 10, 568, 691 |
| CviQI | GTAC | 2 cut(s) | 559, 592 |
| DdeI | CTNAG | 3 cut(s) | 216, 258, 495 |
| DpnI | GATC | 2 cut(s) | 349, 458 |
| DpnII | GATC | 2 cut(s) | 347, 456 |
| EaeI | YGGCCR | 2 cut(s) | 3, 570 |
| Eam1104I | CTCTTC | 1 cut(s) | 627 |
| EarI | CTCTTC | 1 cut(s) | 627 |
| Eco130I | CCWWGG | 1 cut(s) | 690 |
| EcoRI | GAATTC | 1 cut(s) | 287 |
| EcoRII | CCWGG | 1 cut(s) | 322 |
| EcoT14I | CCWWGG | 1 cut(s) | 690 |
| ErhI | CCWWGG | 1 cut(s) | 690 |
| FaeI | CATG | 3 cut(s) | 13, 571, 694 |
| FaiI | YATR | 5 cut(s) | 11, 569, 586, 672, 692 |
| FaqI | GGGAC | 1 cut(s) | 639 |
| FatI | CATG | 3 cut(s) | 9, 567, 690 |
| FokI | GGATG | 2 cut(s) | 533, 652 |
| FspBI | CTAG | 3 cut(s) | 141, 155, 611 |
| HaeIII | GGCC | 4 cut(s) | 5, 263, 282, 572 |
| Hin1II | CATG | 3 cut(s) | 13, 571, 694 |
| HinfI | GANTC | 2 cut(s) | 28, 376 |
| HphI | GGTGA | 2 cut(s) | 171, 550 |
| Hpy188I | TCNGA | 3 cut(s) | 243, 408, 456 |
| Hpy188III | TCNNGA | 2 cut(s) | 292, 473 |
| HpyAV | CCTTC | 1 cut(s) | 213 |
| HpyCH4III | ACNGT | 1 cut(s) | 166 |
| HpyCH4V | TGCA | 5 cut(s) | 109, 362, 383, 401, 567 |
| HpyF3I | CTNAG | 3 cut(s) | 216, 258, 495 |
| Hsp92II | CATG | 3 cut(s) | 13, 571, 694 |
| Kzo9I | GATC | 2 cut(s) | 347, 456 |
| LguI | GCTCTTC | 1 cut(s) | 627 |
| LmnI | GCTCC | 1 cut(s) | 679 |
| MaeI | CTAG | 3 cut(s) | 141, 155, 611 |
| MaeIII | GTNAC | 2 cut(s) | 166, 580 |
| MalI | GATC | 2 cut(s) | 349, 458 |
| MbiI | CCGCTC | 1 cut(s) | 637 |
| MboI | GATC | 2 cut(s) | 347, 456 |
| MboII | GAAGA | 6 cut(s) | 29, 32, 286, 476, 644, 655 |
| MlsI | TGGCCA | 2 cut(s) | 5, 572 |
| MluCI | AATT | 9 cut(s) | 19, 268, 287, 297, 385, 402, 450, 616, 648 |
| MluNI | TGGCCA | 2 cut(s) | 5, 572 |
| MlyI | GAGTC | 1 cut(s) | 37 |
| MmeI | TCCRAC | 2 cut(s) | 71, 266 |
| Mox20I | TGGCCA | 2 cut(s) | 5, 572 |
| MscI | TGGCCA | 2 cut(s) | 5, 572 |
| Msp20I | TGGCCA | 2 cut(s) | 5, 572 |
| MspR9I | CCNGG | 1 cut(s) | 324 |
| MvaI | CCWGG | 1 cut(s) | 324 |
| NcoI | CCATGG | 1 cut(s) | 690 |
| NdeII | GATC | 2 cut(s) | 347, 456 |
| NlaIII | CATG | 3 cut(s) | 13, 571, 694 |
| NmuCI | GTSAC | 1 cut(s) | 166 |
| PciSI | GCTCTTC | 1 cut(s) | 627 |
| PfeI | GAWTC | 1 cut(s) | 376 |
| PleI | GAGTC | 1 cut(s) | 36 |
| PpsI | GAGTC | 1 cut(s) | 36 |
| Psp6I | CCWGG | 1 cut(s) | 322 |
| PspGI | CCWGG | 1 cut(s) | 322 |
| RsaI | GTAC | 2 cut(s) | 560, 593 |
| RsaNI | GTAC | 2 cut(s) | 559, 592 |
| SapI | GCTCTTC | 1 cut(s) | 627 |
| Sau3AI | GATC | 2 cut(s) | 347, 456 |
| SchI | GAGTC | 1 cut(s) | 37 |
| ScrFI | CCNGG | 1 cut(s) | 324 |
| SetI | ASST | 9 cut(s) | 17, 77, 160, 184, 190, 307, 413, 496, 566 |
| Sse9I | AATT | 9 cut(s) | 19, 268, 287, 297, 385, 402, 450, 616, 648 |
| SsiI | CCGC | 1 cut(s) | 637 |
| SspI | AATATT | 1 cut(s) | 485 |
| SspMI | CTAG | 3 cut(s) | 141, 155, 611 |
| StyD4I | CCNGG | 1 cut(s) | 322 |
| StyI | CCWWGG | 1 cut(s) | 690 |
| TaaI | ACNGT | 1 cut(s) | 166 |
| TaqI | TCGA | 4 cut(s) | 116, 314, 335, 501 |
| TasI | AATT | 9 cut(s) | 19, 268, 287, 297, 385, 402, 450, 616, 648 |
| TfiI | GAWTC | 1 cut(s) | 376 |
| TscAI | CASTG | 1 cut(s) | 169 |
| TseFI | GTSAC | 1 cut(s) | 166 |
| Tsp45I | GTSAC | 1 cut(s) | 166 |
| TspDTI | ATGAA | 1 cut(s) | 656 |
| TspRI | CASTG | 1 cut(s) | 169 |
| XapI | RAATTY | 5 cut(s) | 268, 287, 385, 450, 616 |
| XspI | CTAG | 3 cut(s) | 141, 155, 611 |