Prupe.5G150000_v2.0.a1

Thylakoid lumenal 17.9 kDa protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
13633654 .. 13635715
2062 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G150000.1

Sequence Viewer

Length: 684 bp
ATGAGTTTGATGGTTGGTCATCTTCTACCTCCAACTTCCAAACACTCATTCACTAAAACCTCTGATTGCCTTCAAAACCCAAAAGCTAGTTTGCAAAGTTCAGCCCCAAAGCCCACAATCTTACCCAGTCTACTCTCTTTGGCTCTCTCTGTAACACTCAGCTCACCTTTTCCTGCTTTAGCAGTCCCTTCTCTCAACTCCCAGTCCAATTTAGTCCCTCCCCCCACCACTCCATTCTCTCAATCCAAGAATTTGCAGACTGGGCTGGAAAATGGAAAAATCAGACCTTGCCCATCGATAAATCCAGGCTGTGTGTCAACAAATCCAAGGTCATCATCGTTTGCATTTCCATTGACGATTCCTGCAAATTCTTCAGACAATGCAATTCAGAGGTTGAAAGAAGCAATCTTGGAAACTCAAAAGAATGCAAAAATTCAAATCTTGCAAGATACCCCTGATGGAGGCCAATATCTACAAGCTGAGTTTGATGGAGGGTTTGGCCGAGATGTGCTGGAGTTTCTGGTGAAAGGAGACTTGGTTTCTTACAGGTGCATGGCCACAAAAGTAACCTACTTGTACCCTTTCACTACTGCTTTAGGGAATTCAAAGGGACAAGAAGAAAGGATGAAGAAAATCACTGACCAGTTGGGTTGGTATGCTCCAAGTTTCGAAGCCATGGACTAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

228

Amino Acids

24.54

Weight (kDa)

8.64

Isoelectric Point (pI)

55.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016645)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G24930
fragaria_vesca FvH4_5g08420
malus_domestica MD06G1140800.v1.1
prunus_persica Prupe.5G150000_v2.0.a1
pyrus_communis pycom06g13070
rosa_chinensis RchiOBHm_Chr7g0190021
rosa_laevigata RLG00000004571
rosa_roxburghii Rroxscaffold_3G00264950
rosa_rugosa Rorug06G0501700
rosa_samantha Rh7AG107200 Rh7BG109500 Rh7CG111800 Rh7DG110200
rosa_wichuraiana Rw7G009250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 130
AcoI YGGCCR 2 cut(s) 499, 555
AcsI RAATTY 4 cut(s) 250, 367, 432, 601
AcuI CTGAAG 1 cut(s) 357
AfaI GTAC 1 cut(s) 578
AfiI CCNNNNNNNGG 1 cut(s) 461
AgsI TTSAA 4 cut(s) 74, 397, 437, 606
AjnI CCWGG 1 cut(s) 304
AjuI GAANNNNNNNTTGG 4 cut(s) 32, 64, 518, 550
AluBI AGCT 3 cut(s) 86, 162, 479
AluI AGCT 3 cut(s) 86, 162, 479
Alw26I GTCTC 1 cut(s) 525
AoxI GGCC 3 cut(s) 463, 499, 555
ApoI RAATTY 4 cut(s) 250, 367, 432, 601
ArsI GACNNNNNNTTYG 2 cut(s) 314, 346
AsuHPI GGTGA 2 cut(s) 156, 535
AsuII TTCGAA 1 cut(s) 669
BalI TGGCCA 1 cut(s) 557
BccI CCATC 4 cut(s) 4, 301, 452, 482
BciT130I CCWGG 1 cut(s) 306
BcoDI GTCTC 1 cut(s) 525
BfaI CTAG 2 cut(s) 87, 682
Bme1390I CCNGG 1 cut(s) 306
BmrFI CCNGG 1 cut(s) 306
BmrI ACTGGG 3 cut(s) 120, 196, 270
BmuI ACTGGG 3 cut(s) 120, 196, 270
BpmI CTGGAG 1 cut(s) 533
Bpu14I TTCGAA 1 cut(s) 669
Bsa29I ATCGAT 1 cut(s) 296
BsaJI CCNNGG 2 cut(s) 326, 675
BsaXI ACNNNNNCTCC 2 cut(s) 522, 552
Bsc4I CCNNNNNNNGG 1 cut(s) 461
Bse1I ACTGG 4 cut(s) 126, 202, 265, 643
BseBI CCWGG 1 cut(s) 306
BseCI ATCGAT 1 cut(s) 296
BseDI CCNNGG 2 cut(s) 326, 675
BseGI GGATG 1 cut(s) 630
BseLI CCNNNNNNNGG 1 cut(s) 461
BseMII CTCAG 2 cut(s) 172, 471
BseNI ACTGG 4 cut(s) 126, 202, 265, 643
BshFI GGCC 3 cut(s) 465, 501, 557
BshVI ATCGAT 1 cut(s) 296
BslFI GGGAC 3 cut(s) 170, 200, 624
BslI CCNNNNNNNGG 1 cut(s) 461
BsmAI GTCTC 1 cut(s) 525
BsmFI GGGAC 3 cut(s) 170, 200, 624
BsmI GAATGC 1 cut(s) 430
BsnI GGCC 3 cut(s) 465, 501, 557
Bsp119I TTCGAA 1 cut(s) 669
Bsp19I CCATGG 1 cut(s) 675
BspANI GGCC 3 cut(s) 465, 501, 557
BspCNI CTCAG 2 cut(s) 171, 472
BspDI ATCGAT 1 cut(s) 296
BspT104I TTCGAA 1 cut(s) 669
BsrI ACTGG 4 cut(s) 126, 202, 265, 643
BssECI CCNNGG 2 cut(s) 326, 675
BssT1I CCWWGG 2 cut(s) 326, 675
Bst2UI CCWGG 1 cut(s) 306
BstBI TTCGAA 1 cut(s) 669
BstDEI CTNAG 2 cut(s) 158, 480
BstDSI CCRYGG 1 cut(s) 675
BstENI CCTNNNNNAGG 1 cut(s) 459
BstF5I GGATG 1 cut(s) 630
BstMAI GTCTC 1 cut(s) 525
BstMWI GCNNNNNNNGC 1 cut(s) 262
BstNI CCWGG 1 cut(s) 306
BstSCI CCNGG 1 cut(s) 304
Bsu15I ATCGAT 1 cut(s) 296
BsuRI GGCC 3 cut(s) 465, 501, 557
BsuTUI ATCGAT 1 cut(s) 296
BtgI CCRYGG 1 cut(s) 675
BtsCI GGATG 1 cut(s) 630
BtsIMutI CAGTG 1 cut(s) 636
ClaI ATCGAT 1 cut(s) 296
Csp6I GTAC 1 cut(s) 577
CviAII CATG 2 cut(s) 553, 676
CviQI GTAC 1 cut(s) 577
DdeI CTNAG 2 cut(s) 158, 480
EaeI YGGCCR 2 cut(s) 499, 555
Eco130I CCWWGG 2 cut(s) 326, 675
Eco57I CTGAAG 1 cut(s) 357
EcoNI CCTNNNNNAGG 1 cut(s) 459
EcoRI GAATTC 1 cut(s) 601
EcoRII CCWGG 1 cut(s) 304
EcoT14I CCWWGG 2 cut(s) 326, 675
ErhI CCWWGG 2 cut(s) 326, 675
FaeI CATG 2 cut(s) 556, 679
FaiI YATR 3 cut(s) 554, 657, 677
FaqI GGGAC 3 cut(s) 170, 200, 624
FatI CATG 2 cut(s) 552, 675
FblI GTMKAC 1 cut(s) 130
FokI GGATG 1 cut(s) 637
FspBI CTAG 2 cut(s) 87, 682
GsuI CTGGAG 1 cut(s) 533
HaeIII GGCC 3 cut(s) 465, 501, 557
Hin1II CATG 2 cut(s) 556, 679
HincII GTYRAC 1 cut(s) 318
HindII GTYRAC 1 cut(s) 318
HinfI GANTC 1 cut(s) 358
HphI GGTGA 2 cut(s) 156, 535
Hpy166II GTNNAC 2 cut(s) 131, 318
Hpy188I TCNGA 4 cut(s) 64, 284, 376, 390
Hpy8I GTNNAC 2 cut(s) 131, 318
HpyAV CCTTC 2 cut(s) 80, 198
HpyCH4V TGCA 8 cut(s) 94, 256, 344, 365, 383, 428, 445, 552
HpyF10VI GCNNNNNNNGC 1 cut(s) 262
HpyF3I CTNAG 2 cut(s) 158, 480
Hsp92II CATG 2 cut(s) 556, 679
LmnI GCTCC 1 cut(s) 664
MaeI CTAG 2 cut(s) 87, 682
MaeIII GTNAC 2 cut(s) 151, 565
MboII GAAGA 4 cut(s) 14, 363, 629, 640
MlsI TGGCCA 1 cut(s) 557
MluCI AATT 6 cut(s) 208, 250, 367, 384, 432, 601
MluNI TGGCCA 1 cut(s) 557
MmeI TCCRAC 1 cut(s) 56
MnlI CCTC 6 cut(s) 39, 70, 228, 384, 455, 485
Mox20I TGGCCA 1 cut(s) 557
MscI TGGCCA 1 cut(s) 557
Msp20I TGGCCA 1 cut(s) 557
MspR9I CCNGG 1 cut(s) 306
Mva1269I GAATGC 1 cut(s) 430
MvaI CCWGG 1 cut(s) 306
MwoI GCNNNNNNNGC 1 cut(s) 262
NcoI CCATGG 1 cut(s) 675
NlaIII CATG 2 cut(s) 556, 679
NmeAIII GCCGAG 1 cut(s) 527
NspV TTCGAA 1 cut(s) 669
PctI GAATGC 1 cut(s) 430
PfeI GAWTC 1 cut(s) 358
Psp6I CCWGG 1 cut(s) 304
PspGI CCWGG 1 cut(s) 304
RsaI GTAC 1 cut(s) 578
RsaNI GTAC 1 cut(s) 577
ScrFI CCNGG 1 cut(s) 306
SfuI TTCGAA 1 cut(s) 669
Sse9I AATT 6 cut(s) 208, 250, 367, 384, 432, 601
SspMI CTAG 2 cut(s) 87, 682
StyD4I CCNGG 1 cut(s) 304
StyI CCWWGG 2 cut(s) 326, 675
TaqI TCGA 2 cut(s) 296, 669
TasI AATT 6 cut(s) 208, 250, 367, 384, 432, 601
TfiI GAWTC 1 cut(s) 358
TscAI CASTG 1 cut(s) 643
TspDTI ATGAA 1 cut(s) 641
TspRI CASTG 1 cut(s) 643
XagI CCTNNNNNAGG 1 cut(s) 459
XapI RAATTY 4 cut(s) 250, 367, 432, 601
XmiI GTMKAC 1 cut(s) 130
XspI CTAG 2 cut(s) 87, 682
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.