MD06G1181500.v1.1

Belongs to the aldehyde dehydrogenase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
Physical Location & Seq
Forward (+)
32069104 .. 32074186
5083 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1181500.v1.1.491

Sequence Viewer

Length: 1512 bp
ATGGCGATCCAAATACCGAGCCGGCTGCTGTTCATCGACGGCGAGTGGAGAGAACCGGTCCTCAAGAAACGCATCCCAATCATCAACCCAGCTACTGAAGAAATCATCGGGCATATTCCTGCAGCTACAGCTGAAGATGTGGAGCTTGCAGTGGAGGCTGCTCGGAGAGCTCTTTCCAGGAATAAGGGGAGAGATTGGGCTTCGGCGCCTGGGGCAGTTCGTGCTAAGTATTTGCGTGCTATTGCTGCTAAGATAGGAGAGAGAAAACCTGAGATAGCCAAACTCGAAGCAATTGATTGTGGAAAACCATTGGATGAAGCTGCGTGGGACATAGATGATGTTTCCGGGTGTTTTGAGTACTATGCAGAACTTGCTGAAGGTTTGGATGCACAGCAAAAGGCTCCTATTTCTCTTCCTATGGAGCAATTTAAGTGTCATGTTCTTAAGGAGCCCATTGGCGTTGTTGGGTTAATTACACCATGGAACTATCCATTATTAATGGCTACATGGAAAGTCGCTCCTGCTTTAGCTGCTGGGTGTGCTGCAATATTGAAGCCCTCTGAGTTGGCATCTGTGACTTGTTTGGAGCTAGCTGATGTGTGTAGAGAGGTCGGTCTTCCTCCTGGTGTCCTCAATATCCTGACTGGGCTGGGCCATGAAGCTGGTGCTCCTTTGGTATCTCATCCCCATGTTGATAAGATTGCATTTACCGGAAGTACTATGACCGGGAGCAAGATTATGACAGCTGCAGCCCAATTGGTGAAGCCTGTTTCACTGGAGCTTGGTGGGAAAAGCCCAATTGTTGTTTTTGATGACGTTGATATCGACAAAGCTGCTGAATGGACTGCCTTTGGTTGCTTTTGGACAAATGGACAGATTTGCAGTGCAACATCTCGTCTTATATTACATGAAAACATTGCAACAGAGTTTTTGGATAGGCTTGTGAAATGGTGCAAAAACATCAAGATTGCAGATCCTCTTGAAGAAGGTTGCAGGCTTGGCCCTGTTGTTAGTGGAGGGCAATATGAGAAAATATTGAAGTCCATCGAAACAGCTAAGAGTGAAGGTGCAAGAGTTTTGAGTGGTGGGGCTCGTCCTGAGCATCTAAAGAAAGGATTCTTCATTGAACCAACAATCATAACTGATGTAACAACCTCCATGCAAATCTGGAGAGAAGAAGTTTTCGGCCCTGTTCTTTGTGTCAAAACATTTAGTTCAGAAGACGAAGCTCTTGAACTAGCAAATGACACCCATTACGGCTTAGGTGCTGCAGTCATATCAAAAGATTTAGAAAGGTGTGACCGTTTCTCTAAGGGCCTTCAAGCAGGAATTGTATGGATCAACTGCTCACAACCATGCTTCTGTCAGGCTCCATGGGGAGGCAACAAACGAAGTGGTTTTGGGCGTGAACTAGGGAAATGGGGACTTGATAATTACTTGACCGTGAAGCAAGTTACGGAATATGTATCTGATGATCCATGGGGTTGGTACACGTCGCCTTCAAAGCTGTGA

Protein Analysis

504

Amino Acids

54.74

Weight (kDa)

5.5

Isoelectric Point (pI)

33.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldedh PF00171 16 - 485 3.8e-169 Aldehyde dehydrogenase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 205
AclWI GGATC 3 cut(s) 968, 1346, 1469
AcuI CTGAAG 3 cut(s) 117, 153, 396
AcyI GRCGYC 1 cut(s) 206
AfaI GTAC 3 cut(s) 359, 718, 1490
AfiI CCNNNNNNNGG 1 cut(s) 1379
AflII CTTAAG 1 cut(s) 443
AflIII ACRYGT 1 cut(s) 1491
AgeI ACCGGT 1 cut(s) 55
AgsI TTSAA 7 cut(s) 553, 983, 1039, 1127, 1235, 1322, 1503
AjiI CACGTC 1 cut(s) 1494
AjnI CCWGG 3 cut(s) 176, 208, 622
Alw21I GWGCWC 2 cut(s) 172, 670
AlwI GGATC 3 cut(s) 968, 1346, 1469
AlwNI CAGNNNCTG 1 cut(s) 95
AoxI GGCC 4 cut(s) 652, 1000, 1186, 1315
AseI ATTAAT 1 cut(s) 497
AsiGI ACCGGT 1 cut(s) 55
Asp700I GAANNNNTTC 1 cut(s) 1115
AspLEI GCGC 1 cut(s) 208
AspS9I GGNCC 5 cut(s) 58, 652, 1001, 1187, 1315
AsuC2I CCSGG 2 cut(s) 346, 727
AsuHPI GGTGA 1 cut(s) 772
AsuNHI GCTAGC 1 cut(s) 589
AvaII GGWCC 1 cut(s) 58
BanI GGYRCC 1 cut(s) 205
BanII GRGCYC 3 cut(s) 172, 453, 1093
BbsI GAAGAC 2 cut(s) 608, 1227
Bbv12I GWGCWC 2 cut(s) 172, 670
BccI CCATC 1 cut(s) 1052
BceAI ACGGC 2 cut(s) 55, 1273
BcgI CGANNNNNNTGC 4 cut(s) 7, 41, 815, 849
BciT130I CCWGG 3 cut(s) 178, 210, 624
BcnI CCSGG 2 cut(s) 346, 727
BfaI CTAG 3 cut(s) 590, 1238, 1412
BfmI CTRYAG 4 cut(s) 120, 126, 747, 1269
BfoI RGCGCY 1 cut(s) 209
BfrI CTTAAG 1 cut(s) 443
BmcAI AGTACT 2 cut(s) 359, 718
Bme1390I CCNGG 5 cut(s) 178, 210, 346, 624, 727
Bme18I GGWCC 1 cut(s) 58
BmgBI CACGTC 1 cut(s) 1494
BmgT120I GGNCC 5 cut(s) 58, 652, 1001, 1187, 1315
BmiI GGNNCC 4 cut(s) 207, 402, 450, 1371
BmrFI CCNGG 5 cut(s) 178, 210, 346, 624, 727
BmrI ACTGGG 1 cut(s) 654
BmsI GCATC 4 cut(s) 81, 376, 578, 1111
BmtI GCTAGC 1 cut(s) 593
BmuI ACTGGG 1 cut(s) 654
BpiI GAAGAC 2 cut(s) 608, 1227
BpmI CTGGAG 2 cut(s) 797, 1189
Bpu10I CCTNAGC 2 cut(s) 1098, 1261
BpuEI CTTGAG 1 cut(s) 47
BpuMI CCSGG 2 cut(s) 346, 727
BsaHI GRCGYC 1 cut(s) 206
BsaJI CCNNGG 4 cut(s) 209, 479, 1373, 1478
BsaWI WCCGGW 2 cut(s) 55, 710
Bsc4I CCNNNNNNNGG 1 cut(s) 1379
Bse118I RCCGGY 2 cut(s) 21, 55
Bse1I ACTGG 2 cut(s) 649, 780
Bse3DI GCAATG 1 cut(s) 915
BseBI CCWGG 3 cut(s) 178, 210, 624
BseDI CCNNGG 4 cut(s) 209, 479, 1373, 1478
BseGI GGATG 4 cut(s) 72, 319, 391, 682
BseLI CCNNNNNNNGG 1 cut(s) 1379
BseMI GCAATG 1 cut(s) 915
BseMII CTCAG 3 cut(s) 261, 552, 1089
BseNI ACTGG 2 cut(s) 649, 780
BseYI CCCAGC 3 cut(s) 88, 533, 649
BshFI GGCC 4 cut(s) 654, 1002, 1188, 1317
BshNI GGYRCC 1 cut(s) 205
BshTI ACCGGT 1 cut(s) 55
BsiHKAI GWGCWC 2 cut(s) 172, 670
BsiSI CCGG 5 cut(s) 22, 56, 345, 711, 726
BslFI GGGAC 2 cut(s) 341, 1437
BslI CCNNNNNNNGG 1 cut(s) 1379
BsmFI GGGAC 2 cut(s) 341, 1437
BsnI GGCC 4 cut(s) 654, 1002, 1188, 1317
Bsp1286I GDGCHC 4 cut(s) 172, 453, 670, 1093
Bsp143I GATC 4 cut(s) 6, 973, 1338, 1474
Bsp19I CCATGG 3 cut(s) 479, 1373, 1478
BspANI GGCC 4 cut(s) 654, 1002, 1188, 1317
BspCNI CTCAG 3 cut(s) 262, 553, 1090
BspLI GGNNCC 4 cut(s) 207, 402, 450, 1371
BspMAI CTGCAG 3 cut(s) 124, 751, 1273
BspOI GCTAGC 1 cut(s) 593
BspPI GGATC 3 cut(s) 968, 1346, 1469
BspT107I GGYRCC 1 cut(s) 205
BspTI CTTAAG 1 cut(s) 443
BsrDI GCAATG 1 cut(s) 915
BsrFI RCCGGY 2 cut(s) 21, 55
BsrI ACTGG 2 cut(s) 649, 780
BssAI RCCGGY 2 cut(s) 21, 55
BssECI CCNNGG 4 cut(s) 209, 479, 1373, 1478
BssMI GATC 4 cut(s) 6, 973, 1338, 1474
BssNI GRCGYC 1 cut(s) 206
BssT1I CCWWGG 3 cut(s) 479, 1373, 1478
Bst2UI CCWGG 3 cut(s) 178, 210, 624
Bst4CI ACNGT 2 cut(s) 1304, 1444
Bst6I CTCTTC 1 cut(s) 417
BstACI GRCGYC 1 cut(s) 206
BstAFI CTTAAG 1 cut(s) 443
BstAPI GCANNNNNTGC 2 cut(s) 221, 371
BstC8I GCNNGC 5 cut(s) 23, 147, 237, 591, 995
BstDEI CTNAG 8 cut(s) 225, 249, 270, 561, 1056, 1098, 1261, 1311
BstDSI CCRYGG 3 cut(s) 479, 1373, 1478
BstF5I GGATG 4 cut(s) 72, 319, 391, 682
BstH2I RGCGCY 1 cut(s) 209
BstHHI GCGC 1 cut(s) 208
BstKTI GATC 4 cut(s) 9, 976, 1341, 1477
BstMBI GATC 4 cut(s) 6, 973, 1338, 1474
BstNI CCWGG 3 cut(s) 178, 210, 624
BstSCI CCNGG 5 cut(s) 176, 208, 344, 622, 725
BstSFI CTRYAG 4 cut(s) 120, 126, 747, 1269
BstV2I GAAGAC 2 cut(s) 608, 1227
BstX2I RGATCY 1 cut(s) 973
BstXI CCANNNNNNTGG 2 cut(s) 662, 1485
BstYI RGATCY 1 cut(s) 973
BsuRI GGCC 4 cut(s) 654, 1002, 1188, 1317
BtgI CCRYGG 3 cut(s) 479, 1373, 1478
BtrI CACGTC 1 cut(s) 1494
BtsCI GGATG 4 cut(s) 72, 319, 391, 682
BtsI GCAGTG 2 cut(s) 156, 889
BtsIMutI CAGTG 3 cut(s) 156, 773, 889
Cac8I GCNNGC 5 cut(s) 23, 147, 237, 591, 995
CaiI CAGNNNCTG 1 cut(s) 95
CfoI GCGC 1 cut(s) 208
Cfr10I RCCGGY 2 cut(s) 21, 55
Cfr13I GGNCC 5 cut(s) 58, 652, 1001, 1187, 1315
Csp6I GTAC 3 cut(s) 358, 717, 1489
CspAI ACCGGT 1 cut(s) 55
CspCI CAANNNNNGTGG 2 cut(s) 1375, 1410
CviQI GTAC 3 cut(s) 358, 717, 1489
DdeI CTNAG 8 cut(s) 225, 249, 270, 561, 1056, 1098, 1261, 1311
DinI GGCGCC 1 cut(s) 207
DpnI GATC 4 cut(s) 8, 975, 1340, 1476
DpnII GATC 4 cut(s) 6, 973, 1338, 1474
Eam1104I CTCTTC 1 cut(s) 417
EarI CTCTTC 1 cut(s) 417
Ecl136II GAGCTC 1 cut(s) 170
Eco130I CCWWGG 3 cut(s) 479, 1373, 1478
Eco24I GRGCYC 3 cut(s) 172, 453, 1093
Eco32I GATATC 1 cut(s) 823
Eco47I GGWCC 1 cut(s) 58
Eco53kI GAGCTC 1 cut(s) 170
Eco57I CTGAAG 3 cut(s) 117, 153, 396
EcoICRI GAGCTC 1 cut(s) 170
EcoO109I RGGNCCY 1 cut(s) 1315
EcoRII CCWGG 3 cut(s) 176, 208, 622
EcoRV GATATC 1 cut(s) 823
EcoT14I CCWWGG 3 cut(s) 479, 1373, 1478
EcoT38I GRGCYC 3 cut(s) 172, 453, 1093
EgeI GGCGCC 1 cut(s) 207
EheI GGCGCC 1 cut(s) 207
ErhI CCWWGG 3 cut(s) 479, 1373, 1478
FaqI GGGAC 2 cut(s) 341, 1437
FokI GGATG 4 cut(s) 59, 326, 398, 669
FriOI GRGCYC 3 cut(s) 172, 453, 1093
FspBI CTAG 3 cut(s) 590, 1238, 1412
GlaI GCGC 1 cut(s) 207
GsaI CCCAGC 3 cut(s) 92, 537, 653
GsuI CTGGAG 2 cut(s) 797, 1189
HaeII RGCGCY 1 cut(s) 209
HaeIII GGCC 4 cut(s) 654, 1002, 1188, 1317
HapII CCGG 5 cut(s) 22, 56, 345, 711, 726
HhaI GCGC 1 cut(s) 208
Hin1I GRCGYC 1 cut(s) 206
Hin6I GCGC 1 cut(s) 206
HinP1I GCGC 1 cut(s) 206
HinfI GANTC 1 cut(s) 1116
HpaII CCGG 5 cut(s) 22, 56, 345, 711, 726
HphI GGTGA 1 cut(s) 772
Hpy166II GTNNAC 2 cut(s) 1409, 1491
Hpy188I TCNGA 4 cut(s) 165, 562, 1219, 1471
Hpy188III TCNNGA 7 cut(s) 64, 640, 964, 980, 1097, 1168, 1232
Hpy8I GTNNAC 2 cut(s) 1409, 1491
Hpy99I CGWCG 2 cut(s) 41, 1498
HpyAV CCTTC 5 cut(s) 371, 980, 1058, 1328, 1509
HpyCH4III ACNGT 2 cut(s) 1304, 1444
HpyCH4IV ACGT 2 cut(s) 816, 1493
HpyF3I CTNAG 8 cut(s) 225, 249, 270, 561, 1056, 1098, 1261, 1311
HpySE526I ACGT 2 cut(s) 816, 1493
Hsp92I GRCGYC 1 cut(s) 206
HspAI GCGC 1 cut(s) 206
KasI GGCGCC 1 cut(s) 205
KroI GCCGGC 1 cut(s) 21
KroNI GCCGGC 1 cut(s) 23
Kzo9I GATC 4 cut(s) 6, 973, 1338, 1474
LweI GCATC 4 cut(s) 81, 376, 578, 1111
MaeI CTAG 3 cut(s) 590, 1238, 1412
MaeII ACGT 2 cut(s) 816, 1493
MaeIII GTNAC 4 cut(s) 574, 1147, 1298, 1453
MalI GATC 4 cut(s) 8, 975, 1340, 1476
MboI GATC 4 cut(s) 6, 973, 1338, 1474
MboII GAAGA 8 cut(s) 110, 146, 404, 608, 995, 1111, 1187, 1232
MfeI CAATTG 3 cut(s) 291, 755, 798
MflI RGATCY 1 cut(s) 973
MhlI GDGCHC 4 cut(s) 172, 453, 670, 1093
MluCI AATT 7 cut(s) 291, 425, 471, 755, 798, 1329, 1432
Mly113I GGCGCC 1 cut(s) 206
MroNI GCCGGC 1 cut(s) 21
MroXI GAANNNNTTC 1 cut(s) 1115
MseI TTAA 4 cut(s) 429, 444, 470, 497
MslI CAYNNNNRTG 2 cut(s) 687, 1354
MspA1I CMGCKG 2 cut(s) 131, 746
MspCI CTTAAG 1 cut(s) 443
MspI CCGG 5 cut(s) 22, 56, 345, 711, 726
MspR9I CCNGG 5 cut(s) 178, 210, 346, 624, 727
MunI CAATTG 3 cut(s) 291, 755, 798
MvaI CCWGG 3 cut(s) 178, 210, 624
NaeI GCCGGC 1 cut(s) 23
NarI GGCGCC 1 cut(s) 206
NciI CCSGG 2 cut(s) 346, 727
NcoI CCATGG 3 cut(s) 479, 1373, 1478
NdeII GATC 4 cut(s) 6, 973, 1338, 1474
NgoMIV GCCGGC 1 cut(s) 21
NheI GCTAGC 1 cut(s) 589
NlaIV GGNNCC 4 cut(s) 207, 402, 450, 1371
NmuCI GTSAC 2 cut(s) 574, 1298
PcsI WCGNNNNNNNCGW 1 cut(s) 822
PdiI GCCGGC 1 cut(s) 23
PdmI GAANNNNTTC 1 cut(s) 1115
PfeI GAWTC 1 cut(s) 1116
PfoI TCCNGGA 1 cut(s) 176
PinAI ACCGGT 1 cut(s) 55
PluTI GGCGCC 1 cut(s) 209
PshBI ATTAAT 1 cut(s) 497
Psp124BI GAGCTC 1 cut(s) 172
Psp6I CCWGG 3 cut(s) 176, 208, 622
PspFI CCCAGC 3 cut(s) 88, 533, 649
PspGI CCWGG 3 cut(s) 176, 208, 622
PspN4I GGNNCC 4 cut(s) 207, 402, 450, 1371
PspPI GGNCC 5 cut(s) 58, 652, 1001, 1187, 1315
PstI CTGCAG 3 cut(s) 124, 751, 1273
PstNI CAGNNNCTG 1 cut(s) 95
PsuI RGATCY 1 cut(s) 973
PvuII CAGCTG 2 cut(s) 131, 746
RsaI GTAC 3 cut(s) 359, 718, 1490
RsaNI GTAC 3 cut(s) 358, 717, 1489
RseI CAYNNNNRTG 2 cut(s) 687, 1354
SacI GAGCTC 1 cut(s) 172
SaqAI TTAA 4 cut(s) 429, 444, 470, 497
Sau3AI GATC 4 cut(s) 6, 973, 1338, 1474
Sau96I GGNCC 5 cut(s) 58, 652, 1001, 1187, 1315
ScaI AGTACT 2 cut(s) 359, 718
ScrFI CCNGG 5 cut(s) 178, 210, 346, 624, 727
SduI GDGCHC 4 cut(s) 172, 453, 670, 1093
SfaNI GCATC 4 cut(s) 81, 376, 578, 1111
SfcI CTRYAG 4 cut(s) 120, 126, 747, 1269
SfoI GGCGCC 1 cut(s) 207
SinI GGWCC 1 cut(s) 58
SmiMI CAYNNNNRTG 2 cut(s) 687, 1354
SmlI CTYRAG 2 cut(s) 62, 443
SmoI CTYRAG 2 cut(s) 62, 443
Sse9I AATT 7 cut(s) 291, 425, 471, 755, 798, 1329, 1432
SspDI GGCGCC 1 cut(s) 205
SspI AATATT 2 cut(s) 549, 1035
SspMI CTAG 3 cut(s) 590, 1238, 1412
SstI GAGCTC 1 cut(s) 172
StyD4I CCNGG 5 cut(s) 176, 208, 344, 622, 725
StyI CCWWGG 3 cut(s) 479, 1373, 1478
TaaI ACNGT 2 cut(s) 1304, 1444
TaiI ACGT 2 cut(s) 819, 1496
TaqI TCGA 4 cut(s) 36, 285, 825, 1047
TaqII GACCGA 1 cut(s) 602
TasI AATT 7 cut(s) 291, 425, 471, 755, 798, 1329, 1432
TatI WGTACW 2 cut(s) 357, 716
TfiI GAWTC 1 cut(s) 1116
Tru1I TTAA 4 cut(s) 429, 444, 470, 497
Tru9I TTAA 4 cut(s) 429, 444, 470, 497
TscAI CASTG 3 cut(s) 156, 780, 889
TseFI GTSAC 2 cut(s) 574, 1298
Tsp45I GTSAC 2 cut(s) 574, 1298
TspDTI ATGAA 5 cut(s) 22, 330, 672, 924, 1111
TspGWI ACGGA 1 cut(s) 1472
TspRI CASTG 3 cut(s) 156, 780, 889
Vha464I CTTAAG 1 cut(s) 443
VpaK11BI GGWCC 1 cut(s) 58
VspI ATTAAT 1 cut(s) 497
XmnI GAANNNNTTC 1 cut(s) 1115
XspI CTAG 3 cut(s) 590, 1238, 1412
ZrmI AGTACT 2 cut(s) 359, 718
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.