Prupe.5G179800_v2.0.a1

Belongs to the aldehyde dehydrogenase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
15115521 .. 15120624
5104 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G179800.1

Sequence Viewer

Length: 1512 bp
ATGGCGATCCAAATACCGACTCGGCTGCTATTCATCGATGGTGAGTGGAGAGAACCAGTCCTAAAGAAACGCATACCCATCATCAACCCTGCTAGCGAAGAAATCATTGGGAGTGTTCCTGCAGCTACTGCTGAAGATGTGGAGCTTGCGGTGGAGGCTGCTCGGAGAGCCCTTGCCAGGAACAAGGGAAGAGATTGGGCCTCGGCATCCGGAGCAGTTCGTGCCAAGTATTTGCGAGCTATTGCTGCTAAGATAACAGAGAGAAAATCTGAGCTAGCAAAACTCGAAGCAATTGATTGTGGAAAACCACTGGATGAAGCAGCATGGGACGTGGATGATGTTGCTGGGTGCTTTGAGTACTATGCAGAGCTCGCTGAAGGTTTAGATGCACAGCAAAAGGCCTCTATTTCTCTTCCTATGGAGCAATTTAAAAGTCATGTTCTTAAGGAGCCCATCGGGGTTGTTGGGTTAATTACACCATGGAACTACCCTCTGTTAATGGCCACATGGAAAGTAGCTCCTGCCTTAGCTGCTGGGTGTGCTGCAATATTGAAGCCGTCTGAGTTGGCCTCTGTAACTTGTTTGGAGCTAGCTGCTGTGTGTAGAGAGGTCGGTCTTCCTCCTGGTGTCCTCAATATTCTGACTGGACTGGGCCATGAAGCTGGCGCTCCTTTGGCATCTCATCCCCATGTTGACAAGATTGCATTTACTGGAAGTACTATTACTGGGAGCAAGATTATGACCGCTGCAGCTCAACTGGTGAAGCCTGTTTCACTGGAGCTTGGTGGGAAAAGCCCAATTGTTGTTTTTGACGATGTTGATATTGACAAGGCTGCTGAATGGACTGCCTTTGGTGTCTTTTGGACAAATGGTCAGATCTGCAGTGCAACATCTCGTCTTATAATACATGAAAACATTGCAGCAGAGTTTTTGGACAGGCTTGTGAAATGGATCAAAAACATCAAGATTTCAGATCCTCTTGAAGAAGGTTGTAGGCTTGGCCCTGTTGTTAGTGGAGGGCAGTATGAGAAAATATTGAAGTTCATATCAACAGCTAAGAGTGAAGGTGCAACAGTTTTGAGTGGTGGGGCTCGTCCTGAGCATCTAAAGAAAGGATTCTTCATCGAACCAACAATCATAACTGATGTAACAACCTCCATGCAAATTTGGAGAGAAGAAGTTTTCGGACCTGTTCTTTGTGTCAAAACATTTAGTTCAGAAGATGAAGCCCTTGAACTAGCAAATGACACACAGTATGGCTTAGGCGCTGCTGTCATATCAAAAGATTTAGAAAGGTGTGAGCGCGTTTCTAAGGCCCTTCAGGCGGGAATTGTATGGATCAATTGCTCTCAACCATGCTTCTGTCAGGCTCCATGGGGAGGCAACAAACGAAGTGGTTTTGGGCGTGAATTAGGGAAATGGGGACTTGATAATTACTTGAGCGTGAAACAGGTTACTCAATATGCGTCCGATGAACCCTGGGGTTGGTACAGGTCGCCTTCAAAGCTGTGA

Protein Analysis

504

Amino Acids

54.49

Weight (kDa)

5.64

Isoelectric Point (pI)

28.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 902
AccII CGCG 1 cut(s) 1305
AccIII TCCGGA 1 cut(s) 209
AciI CCGC 3 cut(s) 149, 744, 1325
AclWI GGATC 3 cut(s) 959, 968, 1346
AcoI YGGCCR 1 cut(s) 501
AcsI RAATTY 1 cut(s) 1164
AcuI CTGAAG 3 cut(s) 153, 396, 1304
AfaI GTAC 3 cut(s) 359, 718, 1490
AfiI CCNNNNNNNGG 4 cut(s) 177, 1324, 1379, 1485
AflII CTTAAG 1 cut(s) 443
AgsI TTSAA 5 cut(s) 553, 983, 1039, 1235, 1503
AhdI GACNNNNNGTC 1 cut(s) 870
AjiI CACGTC 1 cut(s) 331
AjnI CCWGG 3 cut(s) 176, 622, 1478
AjuI GAANNNNNNNTTGG 2 cut(s) 90, 122
Alw21I GWGCWC 1 cut(s) 372
AlwI GGATC 3 cut(s) 959, 968, 1346
AlwNI CAGNNNCTG 1 cut(s) 128
Aor13HI TCCGGA 1 cut(s) 209
AoxI GGCC 7 cut(s) 198, 399, 501, 567, 652, 1000, 1314
ApoI RAATTY 1 cut(s) 1164
ArsI GACNNNNNNTTYG 2 cut(s) 1179, 1211
Asp700I GAANNNNTTC 1 cut(s) 1115
AspLEI GCGC 3 cut(s) 668, 1268, 1305
AspS9I GGNCC 5 cut(s) 198, 652, 1001, 1187, 1315
AsuHPI GGTGA 2 cut(s) 53, 772
AsuNHI GCTAGC 3 cut(s) 92, 274, 589
AvaII GGWCC 1 cut(s) 1187
BalI TGGCCA 1 cut(s) 503
BanII GRGCYC 4 cut(s) 172, 372, 453, 1093
BarI GAAGNNNNNNTAC 2 cut(s) 706, 738
BbsI GAAGAC 1 cut(s) 608
Bbv12I GWGCWC 1 cut(s) 372
BccI CCATC 3 cut(s) 32, 86, 461
BceAI ACGGC 1 cut(s) 541
BcgI CGANNNNNNTGC 2 cut(s) 7, 41
BciT130I CCWGG 3 cut(s) 178, 624, 1480
BfaI CTAG 4 cut(s) 93, 275, 590, 1238
BfmI CTRYAG 3 cut(s) 120, 747, 880
BfoI RGCGCY 2 cut(s) 669, 1269
BfrI CTTAAG 1 cut(s) 443
BglI GCCNNNNNGGC 1 cut(s) 1322
BglII AGATCT 1 cut(s) 876
BmcAI AGTACT 2 cut(s) 359, 718
Bme1390I CCNGG 3 cut(s) 178, 624, 1480
Bme18I GGWCC 1 cut(s) 1187
BmeRI GACNNNNNGTC 1 cut(s) 870
BmgBI CACGTC 1 cut(s) 331
BmgT120I GGNCC 5 cut(s) 198, 652, 1001, 1187, 1315
BmiI GGNNCC 2 cut(s) 450, 1371
BmrFI CCNGG 3 cut(s) 178, 624, 1480
BmrI ACTGGG 2 cut(s) 659, 735
BmsI GCATC 4 cut(s) 215, 376, 686, 1111
BmtI GCTAGC 3 cut(s) 96, 278, 593
BmuI ACTGGG 2 cut(s) 659, 735
BpiI GAAGAC 1 cut(s) 608
BplI GAGNNNNNCTC 2 cut(s) 554, 586
BpmI CTGGAG 1 cut(s) 797
Bpu10I CCTNAGC 3 cut(s) 526, 1098, 1261
BpuEI CTTGAG 1 cut(s) 1459
Bsa29I ATCGAT 1 cut(s) 36
BsaJI CCNNGG 5 cut(s) 201, 479, 1373, 1478, 1479
BsaWI WCCGGW 1 cut(s) 209
Bsc4I CCNNNNNNNGG 4 cut(s) 177, 1324, 1379, 1485
Bse1I ACTGG 8 cut(s) 56, 315, 649, 654, 715, 730, 762, 780
Bse3DI GCAATG 1 cut(s) 915
BseAI TCCGGA 1 cut(s) 209
BseBI CCWGG 3 cut(s) 178, 624, 1480
BseCI ATCGAT 1 cut(s) 36
BseDI CCNNGG 5 cut(s) 201, 479, 1373, 1478, 1479
BseGI GGATG 4 cut(s) 206, 319, 340, 682
BseLI CCNNNNNNNGG 4 cut(s) 177, 1324, 1379, 1485
BseMI GCAATG 1 cut(s) 915
BseMII CTCAG 3 cut(s) 261, 552, 1089
BseNI ACTGG 8 cut(s) 56, 315, 649, 654, 715, 730, 762, 780
BseYI CCCAGC 2 cut(s) 344, 533
Bsh1236I CGCG 1 cut(s) 1305
BshFI GGCC 7 cut(s) 200, 401, 503, 569, 654, 1002, 1316
BshVI ATCGAT 1 cut(s) 36
BsiHKAI GWGCWC 1 cut(s) 372
BsiSI CCGG 1 cut(s) 210
BslFI GGGAC 2 cut(s) 341, 1437
BslI CCNNNNNNNGG 4 cut(s) 177, 1324, 1379, 1485
BsmFI GGGAC 2 cut(s) 341, 1437
BsnI GGCC 7 cut(s) 200, 401, 503, 569, 654, 1002, 1316
Bsp1286I GDGCHC 4 cut(s) 172, 372, 453, 1093
Bsp13I TCCGGA 1 cut(s) 209
Bsp143I GATC 5 cut(s) 6, 876, 951, 973, 1338
Bsp19I CCATGG 2 cut(s) 479, 1373
BspACI CCGC 3 cut(s) 149, 744, 1325
BspANI GGCC 7 cut(s) 200, 401, 503, 569, 654, 1002, 1316
BspCNI CTCAG 3 cut(s) 262, 553, 1090
BspDI ATCGAT 1 cut(s) 36
BspEI TCCGGA 1 cut(s) 209
BspFNI CGCG 1 cut(s) 1305
BspLI GGNNCC 2 cut(s) 450, 1371
BspMAI CTGCAG 3 cut(s) 124, 751, 884
BspOI GCTAGC 3 cut(s) 96, 278, 593
BspPI GGATC 3 cut(s) 959, 968, 1346
BspTI CTTAAG 1 cut(s) 443
BsrDI GCAATG 1 cut(s) 915
BsrI ACTGG 8 cut(s) 56, 315, 649, 654, 715, 730, 762, 780
BssECI CCNNGG 5 cut(s) 201, 479, 1373, 1478, 1479
BssMI GATC 5 cut(s) 6, 876, 951, 973, 1338
BssT1I CCWWGG 2 cut(s) 479, 1373
Bst2UI CCWGG 3 cut(s) 178, 624, 1480
Bst4CI ACNGT 2 cut(s) 1075, 1254
Bst6I CTCTTC 2 cut(s) 184, 417
BstAFI CTTAAG 1 cut(s) 443
BstAPI GCANNNNNTGC 2 cut(s) 128, 221
BstC8I GCNNGC 7 cut(s) 94, 147, 237, 276, 372, 591, 664
BstDEI CTNAG 8 cut(s) 249, 270, 526, 561, 1056, 1098, 1261, 1311
BstDSI CCRYGG 2 cut(s) 479, 1373
BstF5I GGATG 4 cut(s) 206, 319, 340, 682
BstFNI CGCG 1 cut(s) 1305
BstH2I RGCGCY 2 cut(s) 669, 1269
BstHHI GCGC 3 cut(s) 668, 1268, 1305
BstKTI GATC 5 cut(s) 9, 879, 954, 976, 1341
BstMBI GATC 5 cut(s) 6, 876, 951, 973, 1338
BstNI CCWGG 3 cut(s) 178, 624, 1480
BstSCI CCNGG 3 cut(s) 176, 622, 1478
BstSFI CTRYAG 3 cut(s) 120, 747, 880
BstUI CGCG 1 cut(s) 1305
BstV2I GAAGAC 1 cut(s) 608
BstX2I RGATCY 2 cut(s) 876, 973
BstXI CCANNNNNNTGG 1 cut(s) 662
BstYI RGATCY 2 cut(s) 876, 973
Bsu15I ATCGAT 1 cut(s) 36
BsuRI GGCC 7 cut(s) 200, 401, 503, 569, 654, 1002, 1316
BsuTUI ATCGAT 1 cut(s) 36
BtgI CCRYGG 2 cut(s) 479, 1373
BtrI CACGTC 1 cut(s) 331
BtsCI GGATG 4 cut(s) 206, 319, 340, 682
BtsI GCAGTG 1 cut(s) 889
BtsIMutI CAGTG 3 cut(s) 308, 773, 889
Cac8I GCNNGC 7 cut(s) 94, 147, 237, 276, 372, 591, 664
CaiI CAGNNNCTG 1 cut(s) 128
CfoI GCGC 3 cut(s) 668, 1268, 1305
Cfr13I GGNCC 5 cut(s) 198, 652, 1001, 1187, 1315
ClaI ATCGAT 1 cut(s) 36
CseI GACGC 1 cut(s) 1455
Csp6I GTAC 3 cut(s) 358, 717, 1489
CspCI CAANNNNNGTGG 2 cut(s) 1375, 1410
CviQI GTAC 3 cut(s) 358, 717, 1489
DdeI CTNAG 8 cut(s) 249, 270, 526, 561, 1056, 1098, 1261, 1311
DpnI GATC 5 cut(s) 8, 878, 953, 975, 1340
DpnII GATC 5 cut(s) 6, 876, 951, 973, 1338
DraI TTTAAA 1 cut(s) 430
DriI GACNNNNNGTC 1 cut(s) 870
EaeI YGGCCR 1 cut(s) 501
Eam1104I CTCTTC 2 cut(s) 184, 417
Eam1105I GACNNNNNGTC 1 cut(s) 870
EarI CTCTTC 2 cut(s) 184, 417
Ecl136II GAGCTC 1 cut(s) 370
Eco130I CCWWGG 2 cut(s) 479, 1373
Eco147I AGGCCT 1 cut(s) 401
Eco24I GRGCYC 4 cut(s) 172, 372, 453, 1093
Eco47I GGWCC 1 cut(s) 1187
Eco53kI GAGCTC 1 cut(s) 370
Eco57I CTGAAG 3 cut(s) 153, 396, 1304
EcoICRI GAGCTC 1 cut(s) 370
EcoO109I RGGNCCY 1 cut(s) 1315
EcoRII CCWGG 3 cut(s) 176, 622, 1478
EcoT14I CCWWGG 2 cut(s) 479, 1373
EcoT38I GRGCYC 4 cut(s) 172, 372, 453, 1093
ErhI CCWWGG 2 cut(s) 479, 1373
FaqI GGGAC 2 cut(s) 341, 1437
FauI CCCGC 1 cut(s) 1318
FokI GGATG 4 cut(s) 193, 326, 347, 669
FriOI GRGCYC 4 cut(s) 172, 372, 453, 1093
FspBI CTAG 4 cut(s) 93, 275, 590, 1238
GlaI GCGC 3 cut(s) 667, 1267, 1304
GsaI CCCAGC 2 cut(s) 348, 537
GsuI CTGGAG 1 cut(s) 797
HaeII RGCGCY 2 cut(s) 669, 1269
HaeIII GGCC 7 cut(s) 200, 401, 503, 569, 654, 1002, 1316
HapII CCGG 1 cut(s) 210
HgaI GACGC 1 cut(s) 1455
HhaI GCGC 3 cut(s) 668, 1268, 1305
Hin6I GCGC 3 cut(s) 666, 1266, 1303
HinP1I GCGC 3 cut(s) 666, 1266, 1303
HincII GTYRAC 1 cut(s) 694
HindII GTYRAC 1 cut(s) 694
HinfI GANTC 2 cut(s) 19, 1116
HpaII CCGG 1 cut(s) 210
HphI GGTGA 2 cut(s) 53, 772
Hpy166II GTNNAC 1 cut(s) 694
Hpy188I TCNGA 9 cut(s) 165, 271, 562, 642, 876, 973, 1187, 1219, 1471
Hpy188III TCNNGA 4 cut(s) 210, 964, 980, 1097
Hpy8I GTNNAC 1 cut(s) 694
HpyAV CCTTC 5 cut(s) 371, 980, 1058, 1328, 1509
HpyCH4III ACNGT 2 cut(s) 1075, 1254
HpyCH4IV ACGT 1 cut(s) 330
HpyF3I CTNAG 8 cut(s) 249, 270, 526, 561, 1056, 1098, 1261, 1311
HpySE526I ACGT 1 cut(s) 330
HspAI GCGC 3 cut(s) 666, 1266, 1303
Kpn2I TCCGGA 1 cut(s) 209
Kzo9I GATC 5 cut(s) 6, 876, 951, 973, 1338
LweI GCATC 4 cut(s) 215, 376, 686, 1111
MaeI CTAG 4 cut(s) 93, 275, 590, 1238
MaeII ACGT 1 cut(s) 330
MaeIII GTNAC 3 cut(s) 574, 1147, 1453
MalI GATC 5 cut(s) 8, 878, 953, 975, 1340
MboI GATC 5 cut(s) 6, 876, 951, 973, 1338
MboII GAAGA 9 cut(s) 110, 146, 201, 404, 608, 995, 1111, 1187, 1232
MfeI CAATTG 3 cut(s) 291, 798, 1342
MflI RGATCY 2 cut(s) 876, 973
MhlI GDGCHC 4 cut(s) 172, 372, 453, 1093
MlsI TGGCCA 1 cut(s) 503
MluCI AATT 9 cut(s) 291, 425, 471, 798, 1164, 1329, 1342, 1409, 1432
MluNI TGGCCA 1 cut(s) 503
MlyI GAGTC 1 cut(s) 13
Mox20I TGGCCA 1 cut(s) 503
MroI TCCGGA 1 cut(s) 209
MroXI GAANNNNTTC 1 cut(s) 1115
MscI TGGCCA 1 cut(s) 503
MseI TTAA 4 cut(s) 429, 444, 470, 497
MslI CAYNNNNRTG 1 cut(s) 687
Msp20I TGGCCA 1 cut(s) 503
MspA1I CMGCKG 1 cut(s) 746
MspCI CTTAAG 1 cut(s) 443
MspI CCGG 1 cut(s) 210
MspR9I CCNGG 3 cut(s) 178, 624, 1480
MunI CAATTG 3 cut(s) 291, 798, 1342
MvaI CCWGG 3 cut(s) 178, 624, 1480
MvnI CGCG 1 cut(s) 1305
NcoI CCATGG 2 cut(s) 479, 1373
NdeII GATC 5 cut(s) 6, 876, 951, 973, 1338
NheI GCTAGC 3 cut(s) 92, 274, 589
NlaIV GGNNCC 2 cut(s) 450, 1371
NmeAIII GCCGAG 1 cut(s) 182
PasI CCCWGGG 1 cut(s) 1479
PceI AGGCCT 1 cut(s) 401
PdmI GAANNNNTTC 1 cut(s) 1115
PfeI GAWTC 1 cut(s) 1116
PleI GAGTC 1 cut(s) 13
PpsI GAGTC 1 cut(s) 13
PsiI TTATAA 1 cut(s) 902
Psp124BI GAGCTC 1 cut(s) 372
Psp6I CCWGG 3 cut(s) 176, 622, 1478
PspFI CCCAGC 2 cut(s) 344, 533
PspGI CCWGG 3 cut(s) 176, 622, 1478
PspN4I GGNNCC 2 cut(s) 450, 1371
PspPI GGNCC 5 cut(s) 198, 652, 1001, 1187, 1315
PstI CTGCAG 3 cut(s) 124, 751, 884
PstNI CAGNNNCTG 1 cut(s) 128
PsuI RGATCY 2 cut(s) 876, 973
RsaI GTAC 3 cut(s) 359, 718, 1490
RsaNI GTAC 3 cut(s) 358, 717, 1489
RseI CAYNNNNRTG 1 cut(s) 687
SacI GAGCTC 1 cut(s) 372
SaqAI TTAA 4 cut(s) 429, 444, 470, 497
Sau3AI GATC 5 cut(s) 6, 876, 951, 973, 1338
Sau96I GGNCC 5 cut(s) 198, 652, 1001, 1187, 1315
ScaI AGTACT 2 cut(s) 359, 718
SchI GAGTC 1 cut(s) 13
ScrFI CCNGG 3 cut(s) 178, 624, 1480
SduI GDGCHC 4 cut(s) 172, 372, 453, 1093
SfaNI GCATC 4 cut(s) 215, 376, 686, 1111
SfcI CTRYAG 3 cut(s) 120, 747, 880
SinI GGWCC 1 cut(s) 1187
SmiMI CAYNNNNRTG 1 cut(s) 687
SmlI CTYRAG 2 cut(s) 443, 1438
SmoI CTYRAG 2 cut(s) 443, 1438
Sse9I AATT 9 cut(s) 291, 425, 471, 798, 1164, 1329, 1342, 1409, 1432
SseBI AGGCCT 1 cut(s) 401
SsiI CCGC 3 cut(s) 149, 744, 1325
SspI AATATT 3 cut(s) 549, 637, 1035
SspMI CTAG 4 cut(s) 93, 275, 590, 1238
SstI GAGCTC 1 cut(s) 372
StuI AGGCCT 1 cut(s) 401
StyD4I CCNGG 3 cut(s) 176, 622, 1478
StyI CCWWGG 2 cut(s) 479, 1373
TaaI ACNGT 2 cut(s) 1075, 1254
TaiI ACGT 1 cut(s) 333
TaqI TCGA 3 cut(s) 36, 285, 1125
TaqII GACCGA 1 cut(s) 602
TasI AATT 9 cut(s) 291, 425, 471, 798, 1164, 1329, 1342, 1409, 1432
TatI WGTACW 2 cut(s) 357, 716
TfiI GAWTC 1 cut(s) 1116
Tru1I TTAA 4 cut(s) 429, 444, 470, 497
Tru9I TTAA 4 cut(s) 429, 444, 470, 497
TscAI CASTG 3 cut(s) 315, 780, 889
TspDTI ATGAA 8 cut(s) 22, 330, 672, 924, 1033, 1111, 1239, 1488
TspRI CASTG 3 cut(s) 315, 780, 889
Vha464I CTTAAG 1 cut(s) 443
VpaK11BI GGWCC 1 cut(s) 1187
XapI RAATTY 1 cut(s) 1164
XmnI GAANNNNTTC 1 cut(s) 1115
XspI CTAG 4 cut(s) 93, 275, 590, 1238
ZrmI AGTACT 2 cut(s) 359, 718
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.