Prupe.5G179700_v2.0.a1

Belongs to the aldehyde dehydrogenase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
15111445 .. 15115267
3823 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G179700.1

Sequence Viewer

Length: 1512 bp
ATGGCGATCCAAATACCGAACCGGCAGTTATTCATCGATGGCGAGTGGCGAGAACCAGTACTCAAGAAACGCATCCCCATCATCAACCCTGCCACTGAAGAAACCATTGGGGATATTCCTGCAGCAACTGCTGAAGATGTGGAGATTGCAGTGGAGGCTGCTCAAAAAGCCCTGGCCAGGAACAAGGGTAGAGATTGGTCCTCCGCGTCTGGGGCGATTCGTGCCAAGTATTTGCGTGCTATTGCTTCTAAGATAAAAGAAAGAAAATCTGAGCTGGCCAAACTTGAAGCAATTGATAGTGGAAAACCACTGGATGAAACGACCTCTGACATAGATGAGGTTGCCGGGTGTTTCGAATACTATGCAGGCCTTGCTGAAGGTTTGGATGCAAAGCAAAAGGCTCCTATTTCTCTTCCTGCGGAGAATTTTAAATCTCATGTTCTTCAGGAACCGATTGGGGTTGTTGGGTTGATTACAGCATGGAACTACCCTTTATTGATGGCTGCATGGAAAGTAGCTCCTGCCTTGGCTGCTGGGTGTGCTGCTATACTGAAACCATCTGAGTTGGCATCTATAACTTGTTTGGAGCTAGCTGAGGTGTGTATAAAGGTCGGTCTTCCTCCCGGTGTCCTCAATATTCTGACTGGACTGGGCCAGGAAGCTGGCGCTCCTTTGGCATCTCATCCCCATGTTGATAAGGTTGCATTTACTGGAAGTACTATCACTGGGAGCAAGATTATGGCAGCTGCAGCTCAATTGGTCAAGCCTGTTTCACTGGAGCTTGGAGGAAAAAGCCCAATTGTTGTTTTTGAGGATGTTGATATTGAGAAGGCTGTGGAATGGACCTGCTTTGGCATCTTTTTGACAAATGGTCAGATTTGCAGCGCAACCTCCCGTCTTATAGTGCATGAAACAATTGCAGCAGAGTTTATGGACAGGCTTTTGAAATGGTGCAAAAACATCAAGGTTTCAGATCCTATGGATGAAGGTTGCAGGCTTGGTCCTGTTGTTAGTAAAGGGCAGTACGAGAAAATATTGAAGTTCATCTCAACAGCTAAAAGTGAAGGAGCAAAAGTTGCGTTTGGTGGGGGTCGTCCTGAGCATCTAAAGAAAGGGTTCTTCATTGAACCAACCATCATAACCGACATAACAGCCTCGATGCAAATTTGGAGAGAAGAAGTTTTTGGACCTGTTCTTTGTGTAAAAACATTTGGTTCAGAAGAGGAAGCTCTTGAATTAGCAAATGATACCTATTATGGCTTAGGCGCTGCTGTGATGTCAAAAGATTCAGAAAGGTGTGAGCGCTTTTCTAAGTCCCTTCAGGCAGGAATTGTCTGGATCAATTGCTCACAACCATCCTTCATTCAGGCTCCATGGGGAGGCATTAAACGAAGTGGTTTCGGCCGCGAATTAGGAGAATGGGGACTTCATCTCTACTTGAGCGTGAAACAGGTGACTCGGTATGTATCTGATCAACCTTGGGGTTGGTTCAAGTCGCCTTCAAAGCCATGA

Protein Analysis

504

Amino Acids

54.52

Weight (kDa)

6.02

Isoelectric Point (pI)

31.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 854
AccII CGCG 2 cut(s) 206, 1407
AciI CCGC 3 cut(s) 204, 419, 1405
AclWI GGATC 2 cut(s) 968, 1346
AcoI YGGCCR 3 cut(s) 174, 276, 1402
AcsI RAATTY 2 cut(s) 424, 1164
AcuI CTGAAG 5 cut(s) 117, 153, 396, 428, 1304
AfaI GTAC 3 cut(s) 60, 718, 1025
AfeI AGCGCT 1 cut(s) 1304
AfiI CCNNNNNNNGG 3 cut(s) 177, 210, 1379
AgsI TTSAA 7 cut(s) 287, 946, 1039, 1127, 1235, 1492, 1503
AhdI GACNNNNNGTC 1 cut(s) 870
AjnI CCWGG 3 cut(s) 171, 176, 654
AjuI GAANNNNNNNTTGG 4 cut(s) 90, 122, 1167, 1199
AlwI GGATC 2 cut(s) 968, 1346
AlwNI CAGNNNCTG 1 cut(s) 128
Aor51HI AGCGCT 1 cut(s) 1304
AoxI GGCC 5 cut(s) 174, 276, 367, 652, 1402
ApoI RAATTY 2 cut(s) 424, 1164
ArsI GACNNNNNNTTYG 2 cut(s) 1179, 1211
Asp700I GAANNNNTTC 1 cut(s) 1115
AspLEI GCGC 4 cut(s) 668, 887, 1268, 1305
AspS9I GGNCC 5 cut(s) 198, 652, 843, 1001, 1187
AsuC2I CCSGG 2 cut(s) 346, 624
AsuHPI GGTGA 1 cut(s) 1465
AsuII TTCGAA 1 cut(s) 354
AsuNHI GCTAGC 1 cut(s) 589
AvaII GGWCC 4 cut(s) 198, 843, 1001, 1187
BalI TGGCCA 2 cut(s) 176, 278
BbsI GAAGAC 1 cut(s) 608
BbvCI CCTCAGC 1 cut(s) 594
BccI CCATC 6 cut(s) 32, 86, 493, 565, 1142, 1363
BcgI CGANNNNNNTGC 2 cut(s) 344, 378
BciT130I CCWGG 3 cut(s) 173, 178, 656
BclI TGATCA 1 cut(s) 1471
BcnI CCSGG 2 cut(s) 346, 624
BfaI CTAG 1 cut(s) 590
BfmI CTRYAG 2 cut(s) 120, 747
BfoI RGCGCY 3 cut(s) 669, 1269, 1306
BfuAI ACCTGC 1 cut(s) 854
BmcAI AGTACT 2 cut(s) 60, 718
Bme1390I CCNGG 5 cut(s) 173, 178, 346, 624, 656
Bme18I GGWCC 4 cut(s) 198, 843, 1001, 1187
BmeRI GACNNNNNGTC 1 cut(s) 870
BmgT120I GGNCC 5 cut(s) 198, 652, 843, 1001, 1187
BmiI GGNNCC 3 cut(s) 402, 450, 1371
BmrFI CCNGG 5 cut(s) 173, 178, 346, 624, 656
BmrI ACTGGG 2 cut(s) 659, 735
BmsI GCATC 7 cut(s) 81, 376, 578, 686, 864, 1111, 1149
BmtI GCTAGC 1 cut(s) 593
BmuI ACTGGG 2 cut(s) 659, 735
BpiI GAAGAC 1 cut(s) 608
BpmI CTGGAG 1 cut(s) 797
Bpu10I CCTNAGC 3 cut(s) 594, 1098, 1261
Bpu14I TTCGAA 1 cut(s) 354
BpuEI CTTGAG 2 cut(s) 47, 1459
BpuMI CCSGG 2 cut(s) 346, 624
Bsa29I ATCGAT 1 cut(s) 36
BsaJI CCNNGG 4 cut(s) 171, 525, 1373, 1478
BsaXI ACNNNNNCTCC 2 cut(s) 1059, 1089
Bsc4I CCNNNNNNNGG 3 cut(s) 177, 210, 1379
Bse118I RCCGGY 1 cut(s) 21
Bse1I ACTGG 7 cut(s) 56, 315, 649, 654, 715, 730, 780
BseBI CCWGG 3 cut(s) 173, 178, 656
BseCI ATCGAT 1 cut(s) 36
BseDI CCNNGG 4 cut(s) 171, 525, 1373, 1478
BseGI GGATG 7 cut(s) 72, 319, 391, 682, 820, 988, 1355
BseLI CCNNNNNNNGG 3 cut(s) 177, 210, 1379
BseMII CTCAG 4 cut(s) 261, 552, 585, 1089
BseNI ACTGG 7 cut(s) 56, 315, 649, 654, 715, 730, 780
BseX3I CGGCCG 1 cut(s) 1402
BseYI CCCAGC 1 cut(s) 533
Bsh1236I CGCG 2 cut(s) 206, 1407
Bsh1285I CGRYCG 1 cut(s) 1405
BshFI GGCC 5 cut(s) 176, 278, 369, 654, 1404
BshVI ATCGAT 1 cut(s) 36
BsiEI CGRYCG 1 cut(s) 1405
BsiSI CCGG 3 cut(s) 22, 345, 624
BslFI GGGAC 2 cut(s) 1300, 1437
BslI CCNNNNNNNGG 3 cut(s) 177, 210, 1379
BsmFI GGGAC 2 cut(s) 1300, 1437
BsnI GGCC 5 cut(s) 176, 278, 369, 654, 1404
Bsp119I TTCGAA 1 cut(s) 354
Bsp143I GATC 4 cut(s) 6, 973, 1338, 1471
Bsp19I CCATGG 1 cut(s) 1373
BspACI CCGC 3 cut(s) 204, 419, 1405
BspANI GGCC 5 cut(s) 176, 278, 369, 654, 1404
BspCNI CTCAG 4 cut(s) 262, 553, 586, 1090
BspDI ATCGAT 1 cut(s) 36
BspFNI CGCG 2 cut(s) 206, 1407
BspLI GGNNCC 3 cut(s) 402, 450, 1371
BspMAI CTGCAG 2 cut(s) 124, 751
BspMI ACCTGC 1 cut(s) 854
BspOI GCTAGC 1 cut(s) 593
BspPI GGATC 2 cut(s) 968, 1346
BspT104I TTCGAA 1 cut(s) 354
BsrFI RCCGGY 1 cut(s) 21
BsrI ACTGG 7 cut(s) 56, 315, 649, 654, 715, 730, 780
BssAI RCCGGY 1 cut(s) 21
BssECI CCNNGG 4 cut(s) 171, 525, 1373, 1478
BssMI GATC 4 cut(s) 6, 973, 1338, 1471
BssT1I CCWWGG 3 cut(s) 525, 1373, 1478
Bst2UI CCWGG 3 cut(s) 173, 178, 656
Bst6I CTCTTC 2 cut(s) 417, 1215
BstAPI GCANNNNNTGC 3 cut(s) 128, 371, 1076
BstBI TTCGAA 1 cut(s) 354
BstC8I GCNNGC 6 cut(s) 237, 276, 367, 591, 664, 995
BstDEI CTNAG 7 cut(s) 249, 270, 561, 594, 1098, 1261, 1311
BstDSI CCRYGG 1 cut(s) 1373
BstF5I GGATG 7 cut(s) 72, 319, 391, 682, 820, 988, 1355
BstFNI CGCG 2 cut(s) 206, 1407
BstH2I RGCGCY 3 cut(s) 669, 1269, 1306
BstHHI GCGC 4 cut(s) 668, 887, 1268, 1305
BstKTI GATC 4 cut(s) 9, 976, 1341, 1474
BstMBI GATC 4 cut(s) 6, 973, 1338, 1471
BstMCI CGRYCG 1 cut(s) 1405
BstNI CCWGG 3 cut(s) 173, 178, 656
BstSCI CCNGG 5 cut(s) 171, 176, 344, 622, 654
BstSFI CTRYAG 2 cut(s) 120, 747
BstUI CGCG 2 cut(s) 206, 1407
BstV2I GAAGAC 1 cut(s) 608
BstX2I RGATCY 1 cut(s) 973
BstXI CCANNNNNNTGG 1 cut(s) 662
BstYI RGATCY 1 cut(s) 973
BstZI CGGCCG 1 cut(s) 1402
Bsu15I ATCGAT 1 cut(s) 36
BsuRI GGCC 5 cut(s) 176, 278, 369, 654, 1404
BsuTUI ATCGAT 1 cut(s) 36
BtgI CCRYGG 1 cut(s) 1373
BtsCI GGATG 7 cut(s) 72, 319, 391, 682, 820, 988, 1355
BtsI GCAGTG 1 cut(s) 156
BtsIMutI CAGTG 5 cut(s) 93, 156, 308, 723, 773
BveI ACCTGC 1 cut(s) 854
Cac8I GCNNGC 6 cut(s) 237, 276, 367, 591, 664, 995
CaiI CAGNNNCTG 1 cut(s) 128
CfoI GCGC 4 cut(s) 668, 887, 1268, 1305
Cfr10I RCCGGY 1 cut(s) 21
Cfr13I GGNCC 5 cut(s) 198, 652, 843, 1001, 1187
ClaI ATCGAT 1 cut(s) 36
CseI GACGC 1 cut(s) 195
Csp6I GTAC 3 cut(s) 59, 717, 1024
CviAII CATG 7 cut(s) 437, 480, 507, 689, 908, 1374, 1509
CviQI GTAC 3 cut(s) 59, 717, 1024
DdeI CTNAG 7 cut(s) 249, 270, 561, 594, 1098, 1261, 1311
DpnI GATC 4 cut(s) 8, 975, 1340, 1473
DpnII GATC 4 cut(s) 6, 973, 1338, 1471
DraI TTTAAA 1 cut(s) 430
DriI GACNNNNNGTC 1 cut(s) 870
EaeI YGGCCR 3 cut(s) 174, 276, 1402
EagI CGGCCG 1 cut(s) 1402
Eam1104I CTCTTC 2 cut(s) 417, 1215
Eam1105I GACNNNNNGTC 1 cut(s) 870
EarI CTCTTC 2 cut(s) 417, 1215
EclXI CGGCCG 1 cut(s) 1402
Eco130I CCWWGG 3 cut(s) 525, 1373, 1478
Eco147I AGGCCT 1 cut(s) 369
Eco47I GGWCC 4 cut(s) 198, 843, 1001, 1187
Eco47III AGCGCT 1 cut(s) 1304
Eco52I CGGCCG 1 cut(s) 1402
Eco57I CTGAAG 5 cut(s) 117, 153, 396, 428, 1304
EcoRII CCWGG 3 cut(s) 171, 176, 654
EcoT14I CCWWGG 3 cut(s) 525, 1373, 1478
ErhI CCWWGG 3 cut(s) 525, 1373, 1478
FaeI CATG 7 cut(s) 440, 483, 510, 692, 911, 1377, 1512
FaqI GGGAC 2 cut(s) 1300, 1437
FatI CATG 7 cut(s) 436, 479, 506, 688, 907, 1373, 1508
FbaI TGATCA 1 cut(s) 1471
FokI GGATG 7 cut(s) 59, 326, 398, 669, 827, 995, 1342
FspBI CTAG 1 cut(s) 590
GlaI GCGC 4 cut(s) 667, 886, 1267, 1304
GsaI CCCAGC 1 cut(s) 537
GsuI CTGGAG 1 cut(s) 797
HaeII RGCGCY 3 cut(s) 669, 1269, 1306
HaeIII GGCC 5 cut(s) 176, 278, 369, 654, 1404
HapII CCGG 3 cut(s) 22, 345, 624
HgaI GACGC 1 cut(s) 195
HhaI GCGC 4 cut(s) 668, 887, 1268, 1305
Hin1II CATG 7 cut(s) 440, 483, 510, 692, 911, 1377, 1512
Hin6I GCGC 4 cut(s) 666, 885, 1266, 1303
HinP1I GCGC 4 cut(s) 666, 885, 1266, 1303
HinfI GANTC 3 cut(s) 217, 1286, 1456
HpaII CCGG 3 cut(s) 22, 345, 624
HphI GGTGA 1 cut(s) 1465
Hpy188I TCNGA 9 cut(s) 271, 328, 562, 642, 876, 973, 1219, 1291, 1471
Hpy188III TCNNGA 5 cut(s) 64, 446, 1097, 1232, 1336
HpyAV CCTTC 7 cut(s) 371, 823, 980, 1058, 1328, 1369, 1509
HpyF3I CTNAG 7 cut(s) 249, 270, 561, 594, 1098, 1261, 1311
Hsp92II CATG 7 cut(s) 440, 483, 510, 692, 911, 1377, 1512
HspAI GCGC 4 cut(s) 666, 885, 1266, 1303
Ksp22I TGATCA 1 cut(s) 1471
Kzo9I GATC 4 cut(s) 6, 973, 1338, 1471
LmnI GCTCC 8 cut(s) 406, 523, 586, 673, 729, 778, 1067, 1375
LweI GCATC 7 cut(s) 81, 376, 578, 686, 864, 1111, 1149
MaeI CTAG 1 cut(s) 590
MaeIII GTNAC 1 cut(s) 1453
MalI GATC 4 cut(s) 8, 975, 1340, 1473
MboI GATC 4 cut(s) 6, 973, 1338, 1471
MboII GAAGA 8 cut(s) 110, 146, 404, 434, 608, 1111, 1187, 1232
MfeI CAATTG 5 cut(s) 291, 755, 798, 915, 1342
MflI RGATCY 1 cut(s) 973
MlsI TGGCCA 2 cut(s) 176, 278
MluNI TGGCCA 2 cut(s) 176, 278
MlyI GAGTC 1 cut(s) 1450
Mox20I TGGCCA 2 cut(s) 176, 278
MroXI GAANNNNTTC 1 cut(s) 1115
MscI TGGCCA 2 cut(s) 176, 278
MseI TTAA 2 cut(s) 429, 1386
MslI CAYNNNNRTG 1 cut(s) 687
Msp20I TGGCCA 2 cut(s) 176, 278
MspA1I CMGCKG 1 cut(s) 746
MspI CCGG 3 cut(s) 22, 345, 624
MspR9I CCNGG 5 cut(s) 173, 178, 346, 624, 656
MunI CAATTG 5 cut(s) 291, 755, 798, 915, 1342
MvaI CCWGG 3 cut(s) 173, 178, 656
MvnI CGCG 2 cut(s) 206, 1407
NciI CCSGG 2 cut(s) 346, 624
NcoI CCATGG 1 cut(s) 1373
NdeII GATC 4 cut(s) 6, 973, 1338, 1471
NheI GCTAGC 1 cut(s) 589
NlaIII CATG 7 cut(s) 440, 483, 510, 692, 911, 1377, 1512
NlaIV GGNNCC 3 cut(s) 402, 450, 1371
NmuCI GTSAC 1 cut(s) 1453
NspV TTCGAA 1 cut(s) 354
PceI AGGCCT 1 cut(s) 369
PdmI GAANNNNTTC 1 cut(s) 1115
PfeI GAWTC 2 cut(s) 217, 1286
PleI GAGTC 1 cut(s) 1450
PpsI GAGTC 1 cut(s) 1450
Psp6I CCWGG 3 cut(s) 171, 176, 654
PspFI CCCAGC 1 cut(s) 533
PspGI CCWGG 3 cut(s) 171, 176, 654
PspN4I GGNNCC 3 cut(s) 402, 450, 1371
PspPI GGNCC 5 cut(s) 198, 652, 843, 1001, 1187
PstI CTGCAG 2 cut(s) 124, 751
PstNI CAGNNNCTG 1 cut(s) 128
PsuI RGATCY 1 cut(s) 973
PvuII CAGCTG 1 cut(s) 746
RsaI GTAC 3 cut(s) 60, 718, 1025
RsaNI GTAC 3 cut(s) 59, 717, 1024
RseI CAYNNNNRTG 1 cut(s) 687
SaqAI TTAA 2 cut(s) 429, 1386
Sau3AI GATC 4 cut(s) 6, 973, 1338, 1471
Sau96I GGNCC 5 cut(s) 198, 652, 843, 1001, 1187
ScaI AGTACT 2 cut(s) 60, 718
SchI GAGTC 1 cut(s) 1450
ScrFI CCNGG 5 cut(s) 173, 178, 346, 624, 656
SfaNI GCATC 7 cut(s) 81, 376, 578, 686, 864, 1111, 1149
SfcI CTRYAG 2 cut(s) 120, 747
SfuI TTCGAA 1 cut(s) 354
SinI GGWCC 4 cut(s) 198, 843, 1001, 1187
SmiMI CAYNNNNRTG 1 cut(s) 687
SmlI CTYRAG 2 cut(s) 62, 1438
SmoI CTYRAG 2 cut(s) 62, 1438
SseBI AGGCCT 1 cut(s) 369
SsiI CCGC 3 cut(s) 204, 419, 1405
SspI AATATT 2 cut(s) 637, 1035
SspMI CTAG 1 cut(s) 590
StuI AGGCCT 1 cut(s) 369
StyD4I CCNGG 5 cut(s) 171, 176, 344, 622, 654
StyI CCWWGG 3 cut(s) 525, 1373, 1478
TaqI TCGA 3 cut(s) 36, 354, 1157
TaqII GACCGA 1 cut(s) 602
TatI WGTACW 2 cut(s) 58, 716
TauI GCSGC 1 cut(s) 1407
TfiI GAWTC 2 cut(s) 217, 1286
Tru1I TTAA 2 cut(s) 429, 1386
Tru9I TTAA 2 cut(s) 429, 1386
TscAI CASTG 5 cut(s) 100, 156, 315, 730, 780
TseFI GTSAC 1 cut(s) 1453
Tsp45I GTSAC 1 cut(s) 1453
TspDTI ATGAA 8 cut(s) 22, 330, 924, 999, 1033, 1111, 1351, 1418
TspRI CASTG 5 cut(s) 100, 156, 315, 730, 780
VpaK11BI GGWCC 4 cut(s) 198, 843, 1001, 1187
XapI RAATTY 2 cut(s) 424, 1164
XmnI GAANNNNTTC 1 cut(s) 1115
XspI CTAG 1 cut(s) 590
ZrmI AGTACT 2 cut(s) 60, 718
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.