Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0010077

Physical Location & Seq

Genomic Coordinates Forward (+)

35197538 .. 35202426

Gene Structure 4889 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1219700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2925 bp

ATGACTGTCAAAACTCCTGGAACACCAACTTCAAAAATAGACAGGACACCGGCATCAACACCGGCTTCAAAAATAGACAGGACAGTAGTCTCAACTCCAGGTGGGCCTAGAGGAGCTAAGGAGGAGAAGATCGTTGTCACGGTGCGTTTAAGGCCTCTAAACAAAAGAGAGCAACTAGCAAAAGACCAAGTTGCGTGGGAATGCCTCGATGACAACACGATTGTGTACAAGCCCCCGCCTCAAGAACGCTCGGCTCAACCGGTCCCATTCACATTTGATAAAGTTTTCGGTCCTAGTTCCTTAACGGAATCAGTGTACGAGGAAGGAGTGAAAAATGTGGCCTTGTCTTCGTTGATGGGCATCAATGCAACTATATTCGCTTACGGGCAAACGAGCAGTGGGAAGACATACACAATGAGAGGGATAACAGAGAAAGCTGTCATTGATATCTACAACCATATCATCAATACACCGGAGAGAGACTTTACAATAAAAATTTCTGGATTAGAAATATACAATGAGAACGTGAGGGACCTCCTAAATTCAGAATCGGGTCGTAGTTTGAAGCTTCTAGATGATCCAGAGAAAGGTACAGTGGTTGAGAAACTGGTGGAGGAAACTGCAAGCAATGATCAGCATTTGAGACATTTAATCAGCATTTGTGAAGCCCAAAGACAAGTTGGTGAAACTGCTTTGAATGACAACAGCTCCCGGTCTCATCAGATAATAAGGCTGACAATTGAAAGTACGCTGCGTGAGAATTCTGACTGCGTGAGATCTTTCGTGGCAAGCCTGAACTTAGTCGATCTGGCTGGAAGCGAAAGAGCTTCGCAAACACATACAGATGGTGCTAGGCTCCGGGAAGGTTGCCACATCAATCTTAGCTTGATGACACTTACAACTGTCATTAGAAAGCTGAGTGGTGGGAAAAAAAGTGGTCATATACCCTATAGAAACTCAAAGCTCACTCGCATATTGCAGCATTCTCTCGGTGGGAATGCACGCACTGCCATCATATGCACCTTGAGTCCGGCATTGAGCCATTTCGAACAATCTCGCAATACGCTCTTCTTTGCCACTAGGGCAAAGGAAGTAACAAATAATGCTCGTGTGAATATGGTTGTTTCGGACAAACAGCTAGTGAAACATCTGCAGAAGGAAGTAGCGAGGCTGGAAGCAGAGCTGCGCACCCCTGACCCGTCAAGGGAAAAAGACTTGAAAATTCAGCAGATGGAAATGGAGATTGAAGAACTGAAACGCCAAAGAGATCGTGCTCAATCTCAAGTGCTCGAATTACAGCAAAAACTTGACGAGGATCCACAGGGTTCAAACCCTTCGGAAATACCCCATCCCTCTGTGAAGAAATGTCTCTCATACACCGGTGTTCTATCAACAAAACCCGACAAAAAGGAGATAGGCCCTGGTGATAGAGCAAGAAATTTGAGGCAGTCTATGAGGCAATCATCAACTGCTCCTTTCACACTAATGCATGAAATCCGAAAACTTGAACACCTGCAAGAACAGCTAGGGGAAGAAGCAAATCGAGCTCTGGAAGTATTACAAAAAGAGGTGGCTTGTCATAGGCTAGGCAACCAAGATGCAGCTGAAACAATTGCCAATCTGCAAGCAGAAATAAGAGAAATGCGTTTTGTCAGATCAGTGCCAAAAGAAGTTGAGTTTGGAACTGTCGTTGCTACCAACAAGAGTGTAAGTGCTAATCTCAAGGAAGAGATTACGAGACTTCATTCACAAGGCAGCACGATTGCAAATCTCGAGGAACAGCTAGAAAGTGTTCAGAAGTCGATAGATAAATTGGTGATGTCTCTTCCTAGCAATCAACAAGAGTGCAATATCGAGGCATCCCTCAAGTCTAAGAAAGAGTCTAAAAAGAAGTGCCTACCTTTGACCTCAAGTAACATTGCCAACCGGCAAAATTTCATCAGATCACCTTGCTCACCTCTATCAGCTTCTCGGCAAATTGCAGAATCTGAAACCGAAAATAGGGCTCCTGAGAATGATGATATTTTGTCCGGCGAGATTCAACCAGAGTCTGAGAAGAGGACTCCGACAAAGAATGAAGAATGTGGAGATGTCTCATCAAAGGAGAGCACTCCAACAGGGTATCGGCGTTCTAGTTCAGTAAACATGAAGAAAATGCAGAAGATGTTCCAAAATGCAGCAGAAGAGAACGTAAGAAACATTAGAACATATGTAACGGAACTGAAAGAGCGGGTGGCCAAACTGCAGTACCAAAAGCAGCTACTAGTTTGCCAGGTTCTGGAGCTGGAAGCAAATGAAGCTGCCGGGTACAATTTAGAGAATGACGAGAACATATGTGAGACTGAGGAGCCCCAAGTCTCGTGGCAAATAACTTTCAAGGAACAAAGACAGCAGATCATTGAGTTGTGGGATTTGTGCTTTGTCTCCATCATTCACAGGACACAATTTTATTTGTTGTTTAAGGGTGACCCAGCAGATCAAATCTACGTGGAAGTGGAGCTGAGGCGGTTGACATGGCTGCAACAGCATCTTGCGGAACTTGGGAATGCTAGCCCTGCTCAAGTGGGAGACGAACCCACAGTCTCTTTGTCATCAAGTATGAGAGCGCTAAAGCGCGAAAGGGAGTTCCTTGCGAAGAGGTTGTCTTCACGCTTGATGGCAGAGGAGAGGGATGCATTGTACATGAAATGGGATGTCCCGCTGGAAGGAAAGCAGAGGAAGCTGCAGTTTGTGAACAAGCTTTGGCAAGATCCCCATGATCCCAGGCACATACAGGAGAGTGCTGAAATAGTTGCAAAACTTGTTGGCTTCTGCGAAAGCGGAAACTTGTCGAGAGAGATGTTTGAGCTCAATTTTGTGCTCCCATCTGATAGGAGGCCATGGATGATGGGCTGGAACCAGATATCCAATCTTCTTAATTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000280 GO:0000281 GO:0000775 GO:0000910 GO:0000911 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005694 GO:0005737 GO:0005856 GO:0005871 GO:0005875 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0007275 GO:0007349 GO:0008150 GO:0009524 GO:0009553 GO:0009555 GO:0009558 GO:0009561 GO:0009653 GO:0009987 GO:0015630 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0022607 GO:0032501 GO:0032502 GO:0032506 GO:0032991 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043515 GO:0044085 GO:0044422 GO:0044424 GO:0044427 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0048229 GO:0048285 GO:0048646 GO:0048856 GO:0051225 GO:0051301 GO:0061640 GO:0070925 GO:0071840 GO:0090307 GO:0098687 GO:0140014 GO:1902410 GO:1902850 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3490 Kinesin

Protein Analysis

975

Amino Acids

110.16

Weight (kDa)

7.05

Isoelectric Point (pI)

55.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	47 - 180	4.1e-20	Microtubule binding
Kinesin	PF00225	49 - 365	5.5e-99	Kinesin motor domain
DUF3490	PF11995	792 - 954	5.9e-70	Domain of unknown function (DUF3490)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010077)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18370
fragaria_vesca	FvH4_5g11710 FvH4_5g11710 FvH4_5g11710 FvH4_5g11710
malus_domestica	MD06G1219700.v1.1 MD14G1229400.v1.1
prunus_persica	Prupe.5G224200_v2.0.a1
pyrus_communis	pycom06g19610 pycom14g19070
rosa_chinensis	RchiOBHm_Chr7g0186051
rosa_laevigata	RLG00000004869
rosa_multiflora	Rmu_co8507379.1_g000001 Rmu_sc0000194.1_g000022
rosa_roxburghii	Rroxscaffold_3G00268470
rosa_rugosa	Rorug06G0471900
rosa_samantha	Rh7AG070000 Rh7BG086000 Rh7CG078300 Rh7DG078300
rosa_wichuraiana	Rw7G006510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1521
Acc16I	TGCGCA	1 cut(s)	1187
Acc36I	ACCTGC	1 cut(s)	1521
AccB7I	CCANNNNNTGG	1 cut(s)	2278
AccBSI	CCGCTC	1 cut(s)	2230
AccII	CGCG	1 cut(s)	2616
AciI	CCGC	6 cut(s)	236, 2230, 2506, 2534, 2699, 2820
AclWI	GGATC	5 cut(s)	572, 1310, 1323, 2744, 2753
AcoI	YGGCCR	1 cut(s)	2235
AcsI	RAATTY	6 cut(s)	495, 541, 760, 1221, 1438, 1933
AfaI	GTAC	7 cut(s)	227, 317, 592, 748, 2249, 2309, 2681
AfeI	AGCGCT	1 cut(s)	2607
AfiI	CCNNNNNNNGG	5 cut(s)	587, 1204, 2001, 2278, 2705
AgeI	ACCGGT	2 cut(s)	259, 1379
AhlI	ACTAGT	1 cut(s)	2263
AjnI	CCWGG	5 cut(s)	16, 97, 1420, 2271, 2762
AjuI	GAANNNNNNNTTGG	2 cut(s)	1662, 1694
AleI	CACNNNNGTG	1 cut(s)	221
AloI	GAACNNNNNNTCC	2 cut(s)	2888, 2920
Alw21I	GWGCWC	6 cut(s)	1276, 1290, 1549, 2111, 2850, 2862
AlwI	GGATC	5 cut(s)	572, 1310, 1323, 2744, 2753
AlwNI	CAGNNNCTG	3 cut(s)	1988, 2051, 2278
Ama87I	CYCGRG	1 cut(s)	1772
Aor51HI	AGCGCT	1 cut(s)	2607
AoxI	GGCC	6 cut(s)	104, 152, 339, 1417, 2235, 2876
ApoI	RAATTY	6 cut(s)	495, 541, 760, 1221, 1438, 1933
ArsI	GACNNNNNNTTYG	4 cut(s)	2565, 2597, 2627, 2659
AsiGI	ACCGGT	2 cut(s)	259, 1379
Asp700I	GAANNNNTTC	2 cut(s)	1791, 2165
AspLEI	GCGC	3 cut(s)	1188, 2608, 2616
AspS9I	GGNCC	5 cut(s)	104, 262, 290, 532, 1418
AsuC2I	CCSGG	3 cut(s)	712, 860, 2305
AsuHPI	GGTGA	6 cut(s)	695, 1436, 1828, 1938, 1947, 2477
AsuII	TTCGAA	1 cut(s)	1047
AsuNHI	GCTAGC	1 cut(s)	2549
AvaI	CYCGRG	1 cut(s)	1772
AvaII	GGWCC	3 cut(s)	262, 290, 532
BaeI	ACNNNNGTAYC	4 cut(s)	582, 615, 2231, 2264
BalI	TGGCCA	1 cut(s)	2237
BamHI	GGATCC	1 cut(s)	1315
BanII	GRGCYC	4 cut(s)	1549, 2008, 2352, 2850
BauI	CACGAG	2 cut(s)	1107, 2359
BbsI	GAAGAC	3 cut(s)	339, 410, 2637
Bbv12I	GWGCWC	6 cut(s)	1276, 1290, 1549, 2111, 2850, 2862
BbvCI	CCTCAGC	1 cut(s)	2501
BccI	CCATC	9 cut(s)	349, 839, 1019, 1225, 1356, 2435, 2650, 2872, 2881
BciT130I	CCWGG	5 cut(s)	18, 99, 1422, 2273, 2764
BclI	TGATCA	1 cut(s)	631
BcnI	CCSGG	3 cut(s)	712, 860, 2305
BcuI	ACTAGT	1 cut(s)	2263
BfmI	CTRYAG	4 cut(s)	949, 1151, 2243, 2723
BfoI	RGCGCY	1 cut(s)	2609
BfuAI	ACCTGC	1 cut(s)	1521
BglI	GCCNNNNNGGC	1 cut(s)	1082
BglII	AGATCT	1 cut(s)	776
Bme1390I	CCNGG	8 cut(s)	18, 99, 712, 860, 1422, 2273, 2305, 2764
Bme18I	GGWCC	3 cut(s)	262, 290, 532
BmeT110I	CYCGRG	1 cut(s)	1772
BmgT120I	GGNCC	5 cut(s)	104, 262, 290, 532, 1418
BmiI	GGNNCC	7 cut(s)	264, 533, 857, 1317, 2007, 2349, 2897
BmrFI	CCNGG	8 cut(s)	18, 99, 712, 860, 1422, 2273, 2305, 2764
BmsI	GCATC	6 cut(s)	62, 369, 1588, 1868, 2536, 2662
BmtI	GCTAGC	1 cut(s)	2553
BoxI	GACNNNNGTC	1 cut(s)	86
BpiI	GAAGAC	3 cut(s)	339, 410, 2637
BpmI	CTGGAG	2 cut(s)	81, 2300
Bpu10I	CCTNAGC	2 cut(s)	117, 2501
Bpu14I	TTCGAA	1 cut(s)	1047
BpuEI	CTTGAG	7 cut(s)	225, 1045, 1266, 1706, 1850, 1894, 2544
BpuMI	CCSGG	3 cut(s)	712, 860, 2305
BsaAI	YACGTR	1 cut(s)	2488
BsaBI	GATNNNNATC	1 cut(s)	359
BsaI	GGTCTC	1 cut(s)	720
BsaJI	CCNNGG	3 cut(s)	1420, 2762, 2879
BsaWI	WCCGGW	3 cut(s)	259, 472, 1379
BsaXI	ACNNNNNCTCC	2 cut(s)	692, 722
Bsc4I	CCNNNNNNNGG	5 cut(s)	587, 1204, 2001, 2278, 2705
Bse118I	RCCGGY	5 cut(s)	49, 61, 259, 1379, 1926
Bse1I	ACTGG	1 cut(s)	612
Bse3DI	GCAATG	2 cut(s)	634, 1917
Bse8I	GATNNNNATC	1 cut(s)	359
BseBI	CCWGG	5 cut(s)	18, 99, 1422, 2273, 2764
BseDI	CCNNGG	3 cut(s)	1420, 2762, 2879
BseGI	GGATG	5 cut(s)	1348, 1859, 2677, 2698, 2889
BseJI	GATNNNNATC	1 cut(s)	359
BseLI	CCNNNNNNNGG	5 cut(s)	587, 1204, 2001, 2278, 2705
BseMI	GCAATG	2 cut(s)	634, 1917
BseMII	CTCAG	5 cut(s)	908, 2001, 2043, 2334, 2492
BseNI	ACTGG	1 cut(s)	612
BseRI	GAGGAG	4 cut(s)	126, 137, 2360, 2678
BseYI	CCCAGC	1 cut(s)	2470
Bsh1236I	CGCG	1 cut(s)	2616
BshFI	GGCC	6 cut(s)	106, 154, 341, 1419, 2237, 2878
BshTI	ACCGGT	2 cut(s)	259, 1379
BsiHKAI	GWGCWC	6 cut(s)	1276, 1290, 1549, 2111, 2850, 2862
BsiHKCI	CYCGRG	1 cut(s)	1772
BslFI	GGGAC	3 cut(s)	248, 545, 2681
BslI	CCNNNNNNNGG	5 cut(s)	587, 1204, 2001, 2278, 2705
BsmBI	CGTCTC	1 cut(s)	2562
BsmFI	GGGAC	3 cut(s)	248, 545, 2681
BsmI	GAATGC	4 cut(s)	206, 982, 1003, 2551
BsnI	GGCC	6 cut(s)	106, 154, 341, 1419, 2237, 2878
Bso31I	GGTCTC	1 cut(s)	720
BsoBI	CYCGRG	1 cut(s)	1772
Bsp119I	TTCGAA	1 cut(s)	1047
Bsp1286I	GDGCHC	8 cut(s)	1276, 1290, 1549, 2008, 2111, 2352, 2850, 2862
Bsp1407I	TGTACA	2 cut(s)	225, 2679
Bsp19I	CCATGG	1 cut(s)	2879
BspACI	CCGC	6 cut(s)	236, 2230, 2506, 2534, 2699, 2820
BspANI	GGCC	6 cut(s)	106, 154, 341, 1419, 2237, 2878
BspCNI	CTCAG	5 cut(s)	909, 2002, 2044, 2335, 2493
BspFNI	CGCG	1 cut(s)	2616
BspLI	GGNNCC	7 cut(s)	264, 533, 857, 1317, 2007, 2349, 2897
BspMAI	CTGCAG	3 cut(s)	1155, 2247, 2727
BspMI	ACCTGC	1 cut(s)	1521
BspOI	GCTAGC	1 cut(s)	2553
BspPI	GGATC	5 cut(s)	572, 1310, 1323, 2744, 2753
BspQI	GCTCTTC	1 cut(s)	1073
BspT104I	TTCGAA	1 cut(s)	1047
BspTNI	GGTCTC	1 cut(s)	720
BsrBI	CCGCTC	1 cut(s)	2230
BsrDI	GCAATG	2 cut(s)	634, 1917
BsrFI	RCCGGY	5 cut(s)	49, 61, 259, 1379, 1926
BsrGI	TGTACA	2 cut(s)	225, 2679
BsrI	ACTGG	1 cut(s)	612
BssAI	RCCGGY	5 cut(s)	49, 61, 259, 1379, 1926
BssECI	CCNNGG	3 cut(s)	1420, 2762, 2879
BssSI	CACGAG	2 cut(s)	1107, 2359
BssT1I	CCWWGG	1 cut(s)	2879
Bst2BI	CACGAG	2 cut(s)	1107, 2359
Bst2UI	CCWGG	5 cut(s)	18, 99, 1422, 2273, 2764
Bst4CI	ACNGT	7 cut(s)	7, 85, 142, 595, 904, 1687, 2581
Bst6I	CTCTTC	6 cut(s)	1073, 1722, 1830, 2051, 2178, 2630
BstAPI	GCANNNNNTGC	1 cut(s)	1007
BstAUI	TGTACA	2 cut(s)	225, 2679
BstBAI	YACGTR	1 cut(s)	2488
BstBI	TTCGAA	1 cut(s)	1047
BstC8I	GCNNGC	5 cut(s)	625, 790, 1003, 1626, 2551
BstDEI	CTNAG	9 cut(s)	117, 799, 881, 917, 1872, 2010, 2052, 2343, 2501
BstDSI	CCRYGG	1 cut(s)	2879
BstEII	GGTNACC	1 cut(s)	2465
BstF5I	GGATG	5 cut(s)	1348, 1859, 2677, 2698, 2889
BstFNI	CGCG	1 cut(s)	2616
BstH2I	RGCGCY	1 cut(s)	2609
BstHHI	GCGC	3 cut(s)	1188, 2608, 2616
BstMWI	GCNNNNNNNGC	9 cut(s)	151, 1007, 1082, 1522, 1544, 2297, 2524, 2555, 2719
BstNI	CCWGG	5 cut(s)	18, 99, 1422, 2273, 2764
BstPAI	GACNNNNGTC	1 cut(s)	86
BstPI	GGTNACC	1 cut(s)	2465
BstSCI	CCNGG	8 cut(s)	16, 97, 710, 858, 1420, 2271, 2303, 2762
BstSFI	CTRYAG	4 cut(s)	949, 1151, 2243, 2723
BstUI	CGCG	1 cut(s)	2616
BstV2I	GAAGAC	3 cut(s)	339, 410, 2637
BstX2I	RGATCY	3 cut(s)	776, 1315, 2749
BstYI	RGATCY	3 cut(s)	776, 1315, 2749
BsuRI	GGCC	6 cut(s)	106, 154, 341, 1419, 2237, 2878
BtgI	CCRYGG	1 cut(s)	2879
BtsCI	GGATG	5 cut(s)	1348, 1859, 2677, 2698, 2889
BtsI	GCAGTG	2 cut(s)	403, 1005
BtsIMutI	CAGTG	5 cut(s)	318, 403, 600, 1005, 1665
BveI	ACCTGC	1 cut(s)	1521
Cac8I	GCNNGC	5 cut(s)	625, 790, 1003, 1626, 2551
CaiI	CAGNNNCTG	3 cut(s)	1988, 2051, 2278
CfoI	GCGC	3 cut(s)	1188, 2608, 2616
Cfr10I	RCCGGY	5 cut(s)	49, 61, 259, 1379, 1926
Cfr13I	GGNCC	5 cut(s)	104, 262, 290, 532, 1418
Csp6I	GTAC	7 cut(s)	226, 316, 591, 747, 2248, 2308, 2680
CspAI	ACCGGT	2 cut(s)	259, 1379
CspCI	CAANNNNNGTGG	4 cut(s)	176, 211, 2342, 2377
CviAII	CATG	6 cut(s)	1490, 2146, 2514, 2683, 2756, 2880
CviQI	GTAC	7 cut(s)	226, 316, 591, 747, 2248, 2308, 2680
DdeI	CTNAG	9 cut(s)	117, 799, 881, 917, 1872, 2010, 2052, 2343, 2501
EaeI	YGGCCR	1 cut(s)	2235
Eam1104I	CTCTTC	6 cut(s)	1073, 1722, 1830, 2051, 2178, 2630
EarI	CTCTTC	6 cut(s)	1073, 1722, 1830, 2051, 2178, 2630
Ecl136II	GAGCTC	2 cut(s)	1547, 2848
Eco130I	CCWWGG	1 cut(s)	2879
Eco147I	AGGCCT	1 cut(s)	154
Eco24I	GRGCYC	4 cut(s)	1549, 2008, 2352, 2850
Eco31I	GGTCTC	1 cut(s)	720
Eco32I	GATATC	2 cut(s)	448, 2904
Eco47I	GGWCC	3 cut(s)	262, 290, 532
Eco47III	AGCGCT	1 cut(s)	2607
Eco53kI	GAGCTC	2 cut(s)	1547, 2848
Eco88I	CYCGRG	1 cut(s)	1772
Eco91I	GGTNACC	1 cut(s)	2465
EcoICRI	GAGCTC	2 cut(s)	1547, 2848
EcoO109I	RGGNCCY	2 cut(s)	532, 1418
EcoO65I	GGTNACC	1 cut(s)	2465
EcoRI	GAATTC	1 cut(s)	760
EcoRII	CCWGG	5 cut(s)	16, 97, 1420, 2271, 2762
EcoRV	GATATC	2 cut(s)	448, 2904
EcoT14I	CCWWGG	1 cut(s)	2879
EcoT22I	ATGCAT	2 cut(s)	1491, 2677
EcoT38I	GRGCYC	4 cut(s)	1549, 2008, 2352, 2850
ErhI	CCWWGG	1 cut(s)	2879
Esp3I	CGTCTC	1 cut(s)	2562
FaeI	CATG	6 cut(s)	1493, 2149, 2517, 2686, 2759, 2883
FaqI	GGGAC	3 cut(s)	248, 545, 2681
FatI	CATG	6 cut(s)	1489, 2145, 2513, 2682, 2755, 2879
FauI	CCCGC	3 cut(s)	243, 2223, 2706
FauNDI	CATATG	3 cut(s)	1016, 2209, 2333
FbaI	TGATCA	1 cut(s)	631
FokI	GGATG	5 cut(s)	1335, 1846, 2684, 2705, 2896
FriOI	GRGCYC	4 cut(s)	1549, 2008, 2352, 2850
FspI	TGCGCA	1 cut(s)	1187
GlaI	GCGC	3 cut(s)	1187, 2607, 2615
GsaI	CCCAGC	1 cut(s)	2474
GsuI	CTGGAG	2 cut(s)	81, 2300
HaeII	RGCGCY	1 cut(s)	2609
HaeIII	GGCC	6 cut(s)	106, 154, 341, 1419, 2237, 2878
HhaI	GCGC	3 cut(s)	1188, 2608, 2616
Hin1II	CATG	6 cut(s)	1493, 2149, 2517, 2686, 2759, 2883
Hin6I	GCGC	3 cut(s)	1186, 2606, 2614
HinP1I	GCGC	3 cut(s)	1186, 2606, 2614
HincII	GTYRAC	1 cut(s)	2511
HindII	GTYRAC	1 cut(s)	2511
HindIII	AAGCTT	2 cut(s)	566, 2738
HinfI	GANTC	8 cut(s)	308, 548, 1027, 1880, 1985, 2038, 2048, 2062
HphI	GGTGA	6 cut(s)	695, 1436, 1828, 1938, 1947, 2477
Hpy166II	GTNNAC	5 cut(s)	226, 316, 2143, 2511, 2734
Hpy188III	TCNNGA	9 cut(s)	242, 501, 572, 581, 1550, 1772, 2009, 2279, 2832
Hpy8I	GTNNAC	5 cut(s)	226, 316, 2143, 2511, 2734
HpyAV	CCTTC	5 cut(s)	317, 857, 1150, 1344, 2699
HpyCH4III	ACNGT	7 cut(s)	7, 85, 142, 595, 904, 1687, 2581
HpyCH4IV	ACGT	3 cut(s)	525, 2190, 2487
HpyF10VI	GCNNNNNNNGC	9 cut(s)	151, 1007, 1082, 1522, 1544, 2297, 2524, 2555, 2719
HpyF3I	CTNAG	9 cut(s)	117, 799, 881, 917, 1872, 2010, 2052, 2343, 2501
HpySE526I	ACGT	3 cut(s)	525, 2190, 2487
Hsp92II	CATG	6 cut(s)	1493, 2149, 2517, 2686, 2759, 2883
HspAI	GCGC	3 cut(s)	1186, 2606, 2614
Ksp22I	TGATCA	1 cut(s)	631
LguI	GCTCTTC	1 cut(s)	1073
LmnI	GCTCC	9 cut(s)	113, 713, 861, 1477, 2011, 2281, 2347, 2497, 2865
LweI	GCATC	6 cut(s)	62, 369, 1588, 1868, 2536, 2662
MaeII	ACGT	3 cut(s)	525, 2190, 2487
MaeIII	GTNAC	5 cut(s)	136, 1093, 1913, 2212, 2465
MbiI	CCGCTC	1 cut(s)	2230
MfeI	CAATTG	2 cut(s)	738, 1611
MflI	RGATCY	3 cut(s)	776, 1315, 2749
MhlI	GDGCHC	8 cut(s)	1276, 1290, 1549, 2008, 2111, 2352, 2850, 2862
MlsI	TGGCCA	1 cut(s)	2237
MluNI	TGGCCA	1 cut(s)	2237
MlyI	GAGTC	4 cut(s)	1036, 1889, 2056, 2057
MmeI	TCCRAC	2 cut(s)	2090, 2138
Mox20I	TGGCCA	1 cut(s)	2237
Mph1103I	ATGCAT	2 cut(s)	1491, 2677
MroXI	GAANNNNTTC	2 cut(s)	1791, 2165
MscI	TGGCCA	1 cut(s)	2237
MseI	TTAA	5 cut(s)	149, 302, 650, 2460, 2916
MslI	CAYNNNNRTG	3 cut(s)	221, 843, 1484
Msp20I	TGGCCA	1 cut(s)	2237
MspA1I	CMGCKG	2 cut(s)	1604, 2701
MspR9I	CCNGG	8 cut(s)	18, 99, 712, 860, 1422, 2273, 2305, 2764
MunI	CAATTG	2 cut(s)	738, 1611
Mva1269I	GAATGC	4 cut(s)	206, 982, 1003, 2551
MvaI	CCWGG	5 cut(s)	18, 99, 1422, 2273, 2764
MvnI	CGCG	1 cut(s)	2616
MwoI	GCNNNNNNNGC	9 cut(s)	151, 1007, 1082, 1522, 1544, 2297, 2524, 2555, 2719
NciI	CCSGG	3 cut(s)	712, 860, 2305
NcoI	CCATGG	1 cut(s)	2879
NdeI	CATATG	3 cut(s)	1016, 2209, 2333
NheI	GCTAGC	1 cut(s)	2549
NlaIII	CATG	6 cut(s)	1493, 2149, 2517, 2686, 2759, 2883
NlaIV	GGNNCC	7 cut(s)	264, 533, 857, 1317, 2007, 2349, 2897
NmeAIII	GCCGAG	2 cut(s)	230, 1951
NmuCI	GTSAC	2 cut(s)	136, 2465
NsbI	TGCGCA	1 cut(s)	1187
NsiI	ATGCAT	2 cut(s)	1491, 2677
NspV	TTCGAA	1 cut(s)	1047
OliI	CACNNNNGTG	1 cut(s)	221
PaeR7I	CTCGAG	1 cut(s)	1772
PaqCI	CACCTGC	1 cut(s)	1521
PceI	AGGCCT	1 cut(s)	154
PciSI	GCTCTTC	1 cut(s)	1073
PctI	GAATGC	4 cut(s)	206, 982, 1003, 2551
PdmI	GAANNNNTTC	2 cut(s)	1791, 2165
PfeI	GAWTC	4 cut(s)	308, 548, 1985, 2038
PflMI	CCANNNNNTGG	1 cut(s)	2278
PfoI	TCCNGGA	2 cut(s)	16, 858
PinAI	ACCGGT	2 cut(s)	259, 1379
PleI	GAGTC	4 cut(s)	1035, 1888, 2056, 2056
PpsI	GAGTC	4 cut(s)	1035, 1888, 2056, 2056
Ppu21I	YACGTR	1 cut(s)	2488
PpuMI	RGGWCCY	1 cut(s)	532
PshAI	GACNNNNGTC	1 cut(s)	86
Psp124BI	GAGCTC	2 cut(s)	1549, 2850
Psp5II	RGGWCCY	1 cut(s)	532
Psp6I	CCWGG	5 cut(s)	16, 97, 1420, 2271, 2762
PspEI	GGTNACC	1 cut(s)	2465
PspFI	CCCAGC	1 cut(s)	2470
PspGI	CCWGG	5 cut(s)	16, 97, 1420, 2271, 2762
PspN4I	GGNNCC	7 cut(s)	264, 533, 857, 1317, 2007, 2349, 2897
PspPI	GGNCC	5 cut(s)	104, 262, 290, 532, 1418
PspPPI	RGGWCCY	1 cut(s)	532
PstI	CTGCAG	3 cut(s)	1155, 2247, 2727
PstNI	CAGNNNCTG	3 cut(s)	1988, 2051, 2278
PsuI	RGATCY	3 cut(s)	776, 1315, 2749
PvuII	CAGCTG	1 cut(s)	1604
RsaI	GTAC	7 cut(s)	227, 317, 592, 748, 2249, 2309, 2681
RsaNI	GTAC	7 cut(s)	226, 316, 591, 747, 2248, 2308, 2680
RseI	CAYNNNNRTG	3 cut(s)	221, 843, 1484
SacI	GAGCTC	2 cut(s)	1549, 2850
SapI	GCTCTTC	1 cut(s)	1073
SaqAI	TTAA	5 cut(s)	149, 302, 650, 2460, 2916
Sau96I	GGNCC	5 cut(s)	104, 262, 290, 532, 1418
SchI	GAGTC	4 cut(s)	1036, 1889, 2056, 2057
ScrFI	CCNGG	8 cut(s)	18, 99, 712, 860, 1422, 2273, 2305, 2764
SduI	GDGCHC	8 cut(s)	1276, 1290, 1549, 2008, 2111, 2352, 2850, 2862
SfaNI	GCATC	6 cut(s)	62, 369, 1588, 1868, 2536, 2662
SfcI	CTRYAG	4 cut(s)	949, 1151, 2243, 2723
Sfr274I	CTCGAG	1 cut(s)	1772
SfuI	TTCGAA	1 cut(s)	1047
SgrAI	CRCCGGYG	1 cut(s)	1379
SinI	GGWCC	3 cut(s)	262, 290, 532
SlaI	CTCGAG	1 cut(s)	1772
SmiMI	CAYNNNNRTG	3 cut(s)	221, 843, 1484
SmlI	CTYRAG	8 cut(s)	240, 1024, 1281, 1721, 1772, 1865, 1909, 2559
SmoI	CTYRAG	8 cut(s)	240, 1024, 1281, 1721, 1772, 1865, 1909, 2559
SpeI	ACTAGT	1 cut(s)	2263
SseBI	AGGCCT	1 cut(s)	154
SsiI	CCGC	6 cut(s)	236, 2230, 2506, 2534, 2699, 2820
SstI	GAGCTC	2 cut(s)	1549, 2850
StuI	AGGCCT	1 cut(s)	154
StyD4I	CCNGG	8 cut(s)	16, 97, 710, 858, 1420, 2271, 2303, 2762
StyI	CCWWGG	1 cut(s)	2879
TaaI	ACNGT	7 cut(s)	7, 85, 142, 595, 904, 1687, 2581
TaiI	ACGT	3 cut(s)	528, 2193, 2490
TaqI	TCGA	9 cut(s)	207, 804, 1047, 1290, 1543, 1773, 1802, 1854, 2831
TaqII	GACCGA	1 cut(s)	278
TatI	WGTACW	2 cut(s)	225, 2679
TfiI	GAWTC	4 cut(s)	308, 548, 1985, 2038
Tru1I	TTAA	5 cut(s)	149, 302, 650, 2460, 2916
Tru9I	TTAA	5 cut(s)	149, 302, 650, 2460, 2916
TscAI	CASTG	5 cut(s)	318, 403, 600, 1012, 1665
TseFI	GTSAC	2 cut(s)	136, 2465
Tsp45I	GTSAC	2 cut(s)	136, 2465
TspDTI	ATGAA	7 cut(s)	1506, 1733, 1927, 2091, 2162, 2310, 2699
TspGWI	ACGGA	2 cut(s)	320, 2231
TspRI	CASTG	5 cut(s)	318, 403, 600, 1012, 1665
Van91I	CCANNNNNTGG	1 cut(s)	2278
VpaK11BI	GGWCC	3 cut(s)	262, 290, 532
XapI	RAATTY	6 cut(s)	495, 541, 760, 1221, 1438, 1933
XbaI	TCTAGA	1 cut(s)	571
XcmI	CCANNNNNNNNNTGG	1 cut(s)	677
XhoI	CTCGAG	1 cut(s)	1772
XmnI	GAANNNNTTC	2 cut(s)	1791, 2165
Zsp2I	ATGCAT	2 cut(s)	1491, 2677

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.