Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0010077

Physical Location & Seq

Genomic Coordinates Forward (+)

6224911 .. 6230154

Gene Structure 5244 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG078300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2340 bp

ATGACGGTCAGAACTCCTGGAACCCCAGCTTCAAAAATTGACAAGACGCCAGTGACAACTCCGGCTTCGAAAATCGAGAGGACACCAGTGTCAACTCCAGGAGGGCCGAGAGCTAAGGAAGACAAGATTGTTGTTACCGTGCGTTTGAGGCCTCTGAGCAAAAGGGAGCAGTTGGCAAAAGACCAAGTTGCATGGGAATGCATCGATGATAACACCATTGTATCGAAGCCTGTGGACCGCTCAACTCAGCAGGCCTCATTTACATTTGATAAAGTTTTCGGTCCAAATAGTATAACCGACACTGTATATGAGGAAGGAGTGAAGAATGTAGCCTTGTCTTCTTTGATGGGCATCAATGCTACTATATTTGCTTATGGACAAACTAGCAGTGGGAAGACGTACACAATGCGAGGAATAACAGAGAAAGCTGTCATTGATATCTACAACCATATAATGAATACTCCAGAGAGAGATTTTACAATAAAAATCTCCGGACTTGAAATATACAATGAGAATGTCAAGGACCTGTTAAATGCTGAATCTGGTCGTAATCTAAAGCTTCTAGATGATCCAGAGAAAGGTACTGTGGTTGAGAAACTGGTGGAGGAAACTGCAAGCAATGATCAGCACTTGAGACACTTAATCAGCATTTGTGAAGCTCAAAGACAAGTTGGTGAAACAGCTTTAAATGATAATAGCTCACGGTCACATCAGATAATAAGGCTGACAATTGAAAGTACACTCCGTGAAAATTCAGATTGTGTGAGATCTTTTGTTGCAAGCCTGAACTTTGTAGATCTGGCTGGAAGTGAACGAGCTTCACAGACACATGCAGATGGTGCTAGGCTAAGGGAAGGTTGCCATATCAACCTTAGCCTGATGACACTTACAACTGTTATCAGAAAGCTCAGTGTTGGAAAAAGAAGTGGCCATATACCCTACAGAGACTCAAAGCTCACTCGCATATTGCAGCACTCTCTTGGTGGGAATGCACGCACTGCTATCATATGTACCTTGAGTCCAGCAATGAGTCATCTTGAACAATCTCGGAATACTCTTTACTTTGCCACCAGGGCAAAGGAAGTCACAAATAATGCACGCGTGAACATGGTTGTTTCGGACAAGCAACTAGTGAAACATTTGCAGAAGGAAGTAGCTAGGCTGGAAGCAGAGCTGCGCACCCCTGCCACCCCAGATCCATCGAGTGAAAAAGATTTGAAAATTCAGCAGATGGAAATGGAAATTGAAGAATTGAAACGCCAGAGAGATATTGCTCAATCTCAAGTAATTGAACTACGCCAAAAGCTCAAAGAGGATCCGCAGGTTTCAAATCCATTGGAATTACCCCATCCTTCAGTGACTTCAGTGAAGAAATGTCTCTCCTACACTGGTGTTCTATCAACAAAACTTGATGGCAAGGAGCTAGGCCGTGGTGATAAAGCAAGAAATATAAAGTTGAGGCAGTCTATGAGGCAATCATCAGCTGCTCCTTTTACACTAATGCACGAAATCCGCAAACTTGAGCACCTGCAAGAGCAGCTAGGAGATGAAGCAAATCGAGCCCTGGAAGTATTACAAAAGGAGGTGGCTTGTCATAGACTAGGCAACCAAGATGCAGCTGAAACAATTGCTAACCTGCAAGCAGAAATAAGAGAAATGCAGTCAGTAAGATCAGTGCCAAAAGATGTTGATGTTGGAACTGTGGTTGCTACCAACAAGAGTGTCAGTGCTAATCTAAAGGAGGAGATCACAAGACTTCATTCACAGGGCACCACTATTGCAAATCTTGAGGAACAGCTTGAAAGTGTTCAGAAGTCTATAGATAAATTGGTGATGTCTCTTCCTAGCAATTTTGAACAATGCAATAATGAAGCATTCACCAAGTCTAAGAAGGAGTCCAAAAAGAAAAAGTTATCACCTTTAGCTTCAAGCAATGCTGCCAACCTGCCAAATTTTATCAGATCACCTTGCTCACCTCTATCAGCTTCTCGTCAAATTATAGAGTCTGATGAAATTGAAAATAGAGTTCCTGAACATGATGATACTTTGTTCAGTGATATCCAACCAGAGTCTGATAAGGGGACTCCCACAAAGAGTGAAGATTGTGGAGATGTTTCGTCAAAGGAAAACACTCCATATAGGCCTTCTAGTTCGGTAAACATGAAGAAAATGCAGAAGATGTTCCAAAATGCAGCAGAAGAGAATGTAAGAAGCATAAGAACATATGTAACAGAGCTCAAAGAGCGGGTGGCCAAACTGCAGTACCAAAAGCAACTTCTAGTCTGCCAGGTATGTCAGCATTCCTTCTGGGTCTCCACATATGCATGTTTTTTATGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000280 GO:0000281 GO:0000775 GO:0000910 GO:0000911 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005694 GO:0005737 GO:0005856 GO:0005871 GO:0005875 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0007275 GO:0007349 GO:0008150 GO:0009524 GO:0009553 GO:0009555 GO:0009558 GO:0009561 GO:0009653 GO:0009987 GO:0015630 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0022607 GO:0032501 GO:0032502 GO:0032506 GO:0032991 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043515 GO:0044085 GO:0044422 GO:0044424 GO:0044427 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0048229 GO:0048285 GO:0048646 GO:0048856 GO:0051225 GO:0051301 GO:0061640 GO:0070925 GO:0071840 GO:0090307 GO:0098687 GO:0140014 GO:1902410 GO:1902850 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3490 Kinesin

Protein Analysis

779

Amino Acids

86.98

Weight (kDa)

8.46

Isoelectric Point (pI)

47.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	44 - 177	8.8e-22	Microtubule binding
Kinesin	PF00225	48 - 362	3.8e-100	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010077)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18370
fragaria_vesca	FvH4_5g11710 FvH4_5g11710 FvH4_5g11710 FvH4_5g11710
malus_domestica	MD06G1219700.v1.1 MD14G1229400.v1.1
prunus_persica	Prupe.5G224200_v2.0.a1
pyrus_communis	pycom06g19610 pycom14g19070
rosa_chinensis	RchiOBHm_Chr7g0186051
rosa_laevigata	RLG00000004869
rosa_multiflora	Rmu_co8507379.1_g000001 Rmu_sc0000194.1_g000022
rosa_roxburghii	Rroxscaffold_3G00268470
rosa_rugosa	Rorug06G0471900
rosa_samantha	Rh7AG070000 Rh7BG086000 Rh7CG078300 Rh7DG078300
rosa_wichuraiana	Rw7G006510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1536
AasI	GACNNNNNNGTC	1 cut(s)	88
Acc16I	TGCGCA	1 cut(s)	1178
Acc36I	ACCTGC	4 cut(s)	1312, 1536, 1644, 1953
AccB1I	GGYRCC	1 cut(s)	1769
AccBSI	CCGCTC	2 cut(s)	240, 2245
AccII	CGCG	1 cut(s)	1101
AccIII	TCCGGA	1 cut(s)	491
AciI	CCGC	4 cut(s)	238, 1319, 1513, 2245
AclWI	GGATC	4 cut(s)	563, 1190, 1310, 1323
AcoI	YGGCCR	2 cut(s)	928, 2250
AcsI	RAATTY	3 cut(s)	751, 1221, 1951
AcuI	CTGAAG	2 cut(s)	1338, 1347
AcyI	GRCGYC	1 cut(s)	47
AdeI	CACNNNGTG	1 cut(s)	746
AfaI	GTAC	5 cut(s)	401, 583, 739, 1012, 2264
AfiI	CCNNNNNNNGG	1 cut(s)	578
AflIII	ACRYGT	1 cut(s)	1099
AhlI	ACTAGT	1 cut(s)	1129
AjnI	CCWGG	5 cut(s)	16, 97, 1070, 1563, 2286
AjuI	GAANNNNNNNTTGG	2 cut(s)	2259, 2291
Alw21I	GWGCWC	2 cut(s)	1527, 2238
Alw26I	GTCTC	5 cut(s)	628, 939, 1382, 1842, 2317
AlwI	GGATC	4 cut(s)	563, 1190, 1310, 1323
AlwNI	CAGNNNCTG	1 cut(s)	2072
Aor13HI	TCCGGA	1 cut(s)	491
AoxI	GGCC	7 cut(s)	104, 149, 252, 928, 1426, 2141, 2250
ApeKI	GCWGC	7 cut(s)	970, 1174, 1484, 1537, 1616, 1937, 2192
ApoI	RAATTY	3 cut(s)	751, 1221, 1951
Asp700I	GAANNNNTTC	2 cut(s)	1806, 2180
AspLEI	GCGC	1 cut(s)	1179
AspS9I	GGNCC	4 cut(s)	104, 235, 281, 523
AsuHPI	GGTGA	7 cut(s)	686, 1445, 1843, 1870, 1908, 1956, 1965
AsuII	TTCGAA	1 cut(s)	68
AvaII	GGWCC	3 cut(s)	235, 281, 523
BaeGI	GKGCMC	1 cut(s)	1772
BaeI	ACNNNNGTAYC	6 cut(s)	204, 237, 573, 606, 2246, 2279
BalI	TGGCCA	2 cut(s)	930, 2252
BamHI	GGATCC	1 cut(s)	1315
BanI	GGYRCC	1 cut(s)	1769
BanII	GRGCYC	2 cut(s)	1564, 2238
BbsI	GAAGAC	3 cut(s)	126, 330, 401
Bbv12I	GWGCWC	2 cut(s)	1527, 2238
BbvI	GCAGC	7 cut(s)	982, 1161, 1471, 1549, 1628, 1924, 2204
BccI	CCATC	6 cut(s)	340, 830, 1207, 1225, 1356, 1406
BceAI	ACGGC	1 cut(s)	1413
BciT130I	CCWGG	5 cut(s)	18, 99, 1072, 1565, 2288
BclI	TGATCA	1 cut(s)	622
BcoDI	GTCTC	5 cut(s)	628, 939, 1382, 1842, 2317
BcuI	ACTAGT	1 cut(s)	1129
BfmI	CTRYAG	3 cut(s)	940, 1818, 2258
BfuAI	ACCTGC	4 cut(s)	1312, 1536, 1644, 1953
BglI	GCCNNNNNGGC	1 cut(s)	1073
BglII	AGATCT	2 cut(s)	767, 796
BisI	GCNGC	7 cut(s)	971, 1175, 1485, 1538, 1617, 1938, 2193
BlsI	GCNGC	7 cut(s)	972, 1176, 1486, 1539, 1618, 1939, 2194
Bme1390I	CCNGG	5 cut(s)	18, 99, 1072, 1565, 2288
Bme18I	GGWCC	3 cut(s)	235, 281, 523
BmgT120I	GGNCC	4 cut(s)	104, 235, 281, 523
BmiI	GGNNCC	3 cut(s)	22, 1317, 1771
BmrFI	CCNGG	5 cut(s)	18, 99, 1072, 1565, 2288
BmsI	GCATC	3 cut(s)	210, 360, 1603
BpiI	GAAGAC	3 cut(s)	126, 330, 401
BpmI	CTGGAG	2 cut(s)	81, 447
Bpu10I	CCTNAGC	3 cut(s)	114, 848, 872
Bpu14I	TTCGAA	1 cut(s)	68
BpuEI	CTTGAG	5 cut(s)	652, 1036, 1266, 1541, 1808
Bsa29I	ATCGAT	1 cut(s)	204
BsaBI	GATNNNNATC	1 cut(s)	350
BsaHI	GRCGYC	1 cut(s)	47
BsaI	GGTCTC	1 cut(s)	2317
BsaJI	CCNNGG	3 cut(s)	1071, 1429, 1563
BsaWI	WCCGGW	1 cut(s)	491
Bsc4I	CCNNNNNNNGG	1 cut(s)	578
Bse1I	ACTGG	4 cut(s)	50, 86, 603, 1393
Bse3DI	GCAATG	3 cut(s)	625, 1032, 1939
Bse8I	GATNNNNATC	1 cut(s)	350
BseAI	TCCGGA	1 cut(s)	491
BseBI	CCWGG	5 cut(s)	18, 99, 1072, 1565, 2288
BseCI	ATCGAT	1 cut(s)	204
BseDI	CCNNGG	3 cut(s)	1071, 1429, 1563
BseGI	GGATG	1 cut(s)	1348
BseJI	GATNNNNATC	1 cut(s)	350
BseLI	CCNNNNNNNGG	1 cut(s)	578
BseMI	GCAATG	3 cut(s)	625, 1032, 1939
BseMII	CTCAG	3 cut(s)	146, 260, 922
BseNI	ACTGG	4 cut(s)	50, 86, 603, 1393
BseRI	GAGGAG	1 cut(s)	1757
BseSI	GKGCMC	1 cut(s)	1772
BseXI	GCAGC	7 cut(s)	982, 1161, 1471, 1549, 1628, 1924, 2204
BseYI	CCCAGC	1 cut(s)	25
Bsh1236I	CGCG	1 cut(s)	1101
BshFI	GGCC	7 cut(s)	106, 151, 254, 930, 1428, 2143, 2252
BshNI	GGYRCC	1 cut(s)	1769
BshVI	ATCGAT	1 cut(s)	204
BsiHKAI	GWGCWC	2 cut(s)	1527, 2238
BsiSI	CCGG	2 cut(s)	62, 492
BslFI	GGGAC	1 cut(s)	2095
BslI	CCNNNNNNNGG	1 cut(s)	578
BsmAI	GTCTC	5 cut(s)	628, 939, 1382, 1842, 2317
BsmFI	GGGAC	1 cut(s)	2095
BsmI	GAATGC	4 cut(s)	203, 994, 1874, 2299
BsnI	GGCC	7 cut(s)	106, 151, 254, 930, 1428, 2143, 2252
Bso31I	GGTCTC	1 cut(s)	2317
Bsp119I	TTCGAA	1 cut(s)	68
Bsp1286I	GDGCHC	4 cut(s)	1527, 1564, 1772, 2238
Bsp13I	TCCGGA	1 cut(s)	491
Bsp143I	GATC	9 cut(s)	568, 622, 767, 796, 1195, 1315, 1670, 1746, 1961
BspACI	CCGC	4 cut(s)	238, 1319, 1513, 2245
BspANI	GGCC	7 cut(s)	106, 151, 254, 930, 1428, 2143, 2252
BspCNI	CTCAG	3 cut(s)	147, 259, 921
BspDI	ATCGAT	1 cut(s)	204
BspEI	TCCGGA	1 cut(s)	491
BspFNI	CGCG	1 cut(s)	1101
BspLI	GGNNCC	3 cut(s)	22, 1317, 1771
BspMAI	CTGCAG	1 cut(s)	2262
BspMI	ACCTGC	4 cut(s)	1312, 1536, 1644, 1953
BspPI	GGATC	4 cut(s)	563, 1190, 1310, 1323
BspT104I	TTCGAA	1 cut(s)	68
BspT107I	GGYRCC	1 cut(s)	1769
BspTNI	GGTCTC	1 cut(s)	2317
BsrBI	CCGCTC	2 cut(s)	240, 2245
BsrDI	GCAATG	3 cut(s)	625, 1032, 1939
BsrI	ACTGG	4 cut(s)	50, 86, 603, 1393
BssECI	CCNNGG	3 cut(s)	1071, 1429, 1563
BssMI	GATC	9 cut(s)	568, 622, 767, 796, 1195, 1315, 1670, 1746, 1961
BssNI	GRCGYC	1 cut(s)	47
Bst2UI	CCWGG	5 cut(s)	18, 99, 1072, 1565, 2288
Bst4CI	ACNGT	7 cut(s)	7, 139, 304, 586, 705, 895, 1702
Bst6I	CTCTTC	2 cut(s)	1845, 2193
BstACI	GRCGYC	1 cut(s)	47
BstAPI	GCANNNNNTGC	2 cut(s)	839, 998
BstBI	TTCGAA	1 cut(s)	68
BstC8I	GCNNGC	6 cut(s)	252, 616, 781, 994, 1099, 1641
BstDEI	CTNAG	7 cut(s)	114, 155, 246, 848, 872, 908, 1887
BstDSI	CCRYGG	1 cut(s)	1429
BstF5I	GGATG	1 cut(s)	1348
BstFNI	CGCG	1 cut(s)	1101
BstHHI	GCGC	1 cut(s)	1179
BstKTI	GATC	9 cut(s)	571, 625, 770, 799, 1198, 1318, 1673, 1749, 1964
BstMAI	GTCTC	5 cut(s)	628, 939, 1382, 1842, 2317
BstMBI	GATC	9 cut(s)	568, 622, 767, 796, 1195, 1315, 1670, 1746, 1961
BstMWI	GCNNNNNNNGC	7 cut(s)	148, 839, 998, 1073, 1537, 1559, 2242
BstNI	CCWGG	5 cut(s)	18, 99, 1072, 1565, 2288
BstNSI	RCATGY	2 cut(s)	833, 2328
BstSCI	CCNGG	5 cut(s)	16, 97, 1070, 1563, 2286
BstSFI	CTRYAG	3 cut(s)	940, 1818, 2258
BstSLI	GKGCMC	1 cut(s)	1772
BstUI	CGCG	1 cut(s)	1101
BstV1I	GCAGC	7 cut(s)	982, 1161, 1471, 1549, 1628, 1924, 2204
BstV2I	GAAGAC	3 cut(s)	126, 330, 401
BstX2I	RGATCY	4 cut(s)	767, 796, 1195, 1315
BstYI	RGATCY	4 cut(s)	767, 796, 1195, 1315
Bsu15I	ATCGAT	1 cut(s)	204
BsuRI	GGCC	7 cut(s)	106, 151, 254, 930, 1428, 2143, 2252
BsuTUI	ATCGAT	1 cut(s)	204
BtgI	CCRYGG	1 cut(s)	1429
BtsCI	GGATG	1 cut(s)	1348
BtsI	GCAGTG	2 cut(s)	394, 996
BveI	ACCTGC	4 cut(s)	1312, 1536, 1644, 1953
Cac8I	GCNNGC	6 cut(s)	252, 616, 781, 994, 1099, 1641
CaiI	CAGNNNCTG	1 cut(s)	2072
CfoI	GCGC	1 cut(s)	1179
Cfr13I	GGNCC	4 cut(s)	104, 235, 281, 523
ClaI	ATCGAT	1 cut(s)	204
CseI	GACGC	1 cut(s)	55
Csp6I	GTAC	5 cut(s)	400, 582, 738, 1011, 2263
CviAII	CATG	6 cut(s)	192, 830, 1108, 2036, 2161, 2325
CviQI	GTAC	5 cut(s)	400, 582, 738, 1011, 2263
DdeI	CTNAG	7 cut(s)	114, 155, 246, 848, 872, 908, 1887
DpnI	GATC	9 cut(s)	570, 624, 769, 798, 1197, 1317, 1672, 1748, 1963
DpnII	GATC	9 cut(s)	568, 622, 767, 796, 1195, 1315, 1670, 1746, 1961
DraI	TTTAAA	1 cut(s)	687
DraIII	CACNNNGTG	1 cut(s)	746
DrdI	GACNNNNNNGTC	1 cut(s)	88
DseDI	GACNNNNNNGTC	1 cut(s)	88
EaeI	YGGCCR	2 cut(s)	928, 2250
Eam1104I	CTCTTC	2 cut(s)	1845, 2193
EarI	CTCTTC	2 cut(s)	1845, 2193
Ecl136II	GAGCTC	1 cut(s)	2236
Eco147I	AGGCCT	3 cut(s)	151, 254, 2143
Eco24I	GRGCYC	2 cut(s)	1564, 2238
Eco31I	GGTCTC	1 cut(s)	2317
Eco32I	GATATC	2 cut(s)	439, 2059
Eco47I	GGWCC	3 cut(s)	235, 281, 523
Eco53kI	GAGCTC	1 cut(s)	2236
Eco57I	CTGAAG	2 cut(s)	1338, 1347
EcoICRI	GAGCTC	1 cut(s)	2236
EcoO109I	RGGNCCY	1 cut(s)	523
EcoRII	CCWGG	5 cut(s)	16, 97, 1070, 1563, 2286
EcoRV	GATATC	2 cut(s)	439, 2059
EcoT22I	ATGCAT	2 cut(s)	203, 2326
EcoT38I	GRGCYC	2 cut(s)	1564, 2238
FaeI	CATG	6 cut(s)	195, 833, 1111, 2039, 2164, 2328
FaqI	GGGAC	1 cut(s)	2095
FatI	CATG	6 cut(s)	191, 829, 1107, 2035, 2160, 2324
FauI	CCCGC	1 cut(s)	2238
FauNDI	CATATG	3 cut(s)	1007, 2224, 2320
FbaI	TGATCA	1 cut(s)	622
Fnu4HI	GCNGC	7 cut(s)	971, 1175, 1485, 1538, 1617, 1938, 2193
FokI	GGATG	1 cut(s)	1335
FriOI	GRGCYC	2 cut(s)	1564, 2238
Fsp4HI	GCNGC	7 cut(s)	971, 1175, 1485, 1538, 1617, 1938, 2193
FspI	TGCGCA	1 cut(s)	1178
GlaI	GCGC	1 cut(s)	1178
GluI	GCNGC	7 cut(s)	971, 1175, 1485, 1538, 1617, 1938, 2193
GsaI	CCCAGC	1 cut(s)	29
GsuI	CTGGAG	2 cut(s)	81, 447
HaeIII	GGCC	7 cut(s)	106, 151, 254, 930, 1428, 2143, 2252
HapII	CCGG	2 cut(s)	62, 492
HgaI	GACGC	1 cut(s)	55
HhaI	GCGC	1 cut(s)	1179
Hin1I	GRCGYC	1 cut(s)	47
Hin1II	CATG	6 cut(s)	195, 833, 1111, 2039, 2164, 2328
Hin6I	GCGC	1 cut(s)	1177
HinP1I	GCGC	1 cut(s)	1177
HincII	GTYRAC	1 cut(s)	93
HindII	GTYRAC	1 cut(s)	93
HindIII	AAGCTT	1 cut(s)	557
HinfI	GANTC	8 cut(s)	539, 947, 1018, 1030, 1895, 2003, 2069, 2083
HpaII	CCGG	2 cut(s)	62, 492
HphI	GGTGA	7 cut(s)	686, 1445, 1843, 1870, 1908, 1956, 1965
Hpy166II	GTNNAC	7 cut(s)	93, 235, 402, 740, 812, 1105, 2158
Hpy188III	TCNNGA	8 cut(s)	76, 464, 492, 563, 572, 1037, 1787, 2030
Hpy8I	GTNNAC	7 cut(s)	93, 235, 402, 740, 812, 1105, 2158
HpyAV	CCTTC	7 cut(s)	308, 848, 1141, 1362, 1885, 2154, 2314
HpyCH4III	ACNGT	7 cut(s)	7, 139, 304, 586, 705, 895, 1702
HpyCH4IV	ACGT	1 cut(s)	398
HpyF10VI	GCNNNNNNNGC	7 cut(s)	148, 839, 998, 1073, 1537, 1559, 2242
HpyF3I	CTNAG	7 cut(s)	114, 155, 246, 848, 872, 908, 1887
HpySE526I	ACGT	1 cut(s)	398
Hsp92I	GRCGYC	1 cut(s)	47
Hsp92II	CATG	6 cut(s)	195, 833, 1111, 2039, 2164, 2328
HspAI	GCGC	1 cut(s)	1177
Kpn2I	TCCGGA	1 cut(s)	491
Ksp22I	TGATCA	1 cut(s)	622
Kzo9I	GATC	9 cut(s)	568, 622, 767, 796, 1195, 1315, 1670, 1746, 1961
LmnI	GCTCC	3 cut(s)	166, 1420, 1492
Lsp1109I	GCAGC	7 cut(s)	982, 1161, 1471, 1549, 1628, 1924, 2204
LweI	GCATC	3 cut(s)	210, 360, 1603
MaeII	ACGT	1 cut(s)	398
MaeIII	GTNAC	6 cut(s)	52, 133, 705, 1084, 1357, 2227
MalI	GATC	9 cut(s)	570, 624, 769, 798, 1197, 1317, 1672, 1748, 1963
MbiI	CCGCTC	2 cut(s)	240, 2245
MboI	GATC	9 cut(s)	568, 622, 767, 796, 1195, 1315, 1670, 1746, 1961
MfeI	CAATTG	2 cut(s)	729, 1626
MflI	RGATCY	4 cut(s)	767, 796, 1195, 1315
MhlI	GDGCHC	4 cut(s)	1527, 1564, 1772, 2238
MlsI	TGGCCA	2 cut(s)	930, 2252
MluI	ACGCGT	1 cut(s)	1099
MluNI	TGGCCA	2 cut(s)	930, 2252
MlyI	GAGTC	7 cut(s)	941, 1027, 1039, 1904, 2012, 2077, 2078
MmeI	TCCRAC	3 cut(s)	895, 1675, 2086
Mox20I	TGGCCA	2 cut(s)	930, 2252
Mph1103I	ATGCAT	2 cut(s)	203, 2326
MroI	TCCGGA	1 cut(s)	491
MroXI	GAANNNNTTC	2 cut(s)	1806, 2180
MscI	TGGCCA	2 cut(s)	930, 2252
MseI	TTAA	4 cut(s)	530, 641, 686, 2338
MslI	CAYNNNNRTG	3 cut(s)	196, 834, 2323
Msp20I	TGGCCA	2 cut(s)	930, 2252
MspA1I	CMGCKG	2 cut(s)	1484, 1619
MspI	CCGG	2 cut(s)	62, 492
MspR9I	CCNGG	5 cut(s)	18, 99, 1072, 1565, 2288
MunI	CAATTG	2 cut(s)	729, 1626
Mva1269I	GAATGC	4 cut(s)	203, 994, 1874, 2299
MvaI	CCWGG	5 cut(s)	18, 99, 1072, 1565, 2288
MvnI	CGCG	1 cut(s)	1101
MwoI	GCNNNNNNNGC	7 cut(s)	148, 839, 998, 1073, 1537, 1559, 2242
NdeI	CATATG	3 cut(s)	1007, 2224, 2320
NdeII	GATC	9 cut(s)	568, 622, 767, 796, 1195, 1315, 1670, 1746, 1961
NlaIII	CATG	6 cut(s)	195, 833, 1111, 2039, 2164, 2328
NlaIV	GGNNCC	3 cut(s)	22, 1317, 1771
NmeAIII	GCCGAG	1 cut(s)	132
NmuCI	GTSAC	4 cut(s)	52, 705, 1084, 1357
NsbI	TGCGCA	1 cut(s)	1178
NsiI	ATGCAT	2 cut(s)	203, 2326
NspI	RCATGY	2 cut(s)	833, 2328
NspV	TTCGAA	1 cut(s)	68
PaqCI	CACCTGC	1 cut(s)	1536
PceI	AGGCCT	3 cut(s)	151, 254, 2143
PctI	GAATGC	4 cut(s)	203, 994, 1874, 2299
PdmI	GAANNNNTTC	2 cut(s)	1806, 2180
PfeI	GAWTC	1 cut(s)	539
PfoI	TCCNGGA	2 cut(s)	16, 97
PkrI	GCNGC	7 cut(s)	972, 1176, 1486, 1539, 1618, 1939, 2194
PleI	GAGTC	7 cut(s)	941, 1026, 1038, 1903, 2011, 2077, 2077
PpsI	GAGTC	7 cut(s)	941, 1026, 1038, 1903, 2011, 2077, 2077
PpuMI	RGGWCCY	1 cut(s)	523
Psp124BI	GAGCTC	1 cut(s)	2238
Psp5II	RGGWCCY	1 cut(s)	523
Psp6I	CCWGG	5 cut(s)	16, 97, 1070, 1563, 2286
PspFI	CCCAGC	1 cut(s)	25
PspGI	CCWGG	5 cut(s)	16, 97, 1070, 1563, 2286
PspN4I	GGNNCC	3 cut(s)	22, 1317, 1771
PspPI	GGNCC	4 cut(s)	104, 235, 281, 523
PspPPI	RGGWCCY	1 cut(s)	523
PstI	CTGCAG	1 cut(s)	2262
PstNI	CAGNNNCTG	1 cut(s)	2072
PsuI	RGATCY	4 cut(s)	767, 796, 1195, 1315
PvuII	CAGCTG	2 cut(s)	1484, 1619
RsaI	GTAC	5 cut(s)	401, 583, 739, 1012, 2264
RsaNI	GTAC	5 cut(s)	400, 582, 738, 1011, 2263
RseI	CAYNNNNRTG	3 cut(s)	196, 834, 2323
SacI	GAGCTC	1 cut(s)	2238
SaqAI	TTAA	4 cut(s)	530, 641, 686, 2338
SatI	GCNGC	7 cut(s)	971, 1175, 1485, 1538, 1617, 1938, 2193
Sau3AI	GATC	9 cut(s)	568, 622, 767, 796, 1195, 1315, 1670, 1746, 1961
Sau96I	GGNCC	4 cut(s)	104, 235, 281, 523
SchI	GAGTC	7 cut(s)	941, 1027, 1039, 1904, 2012, 2077, 2078
ScrFI	CCNGG	5 cut(s)	18, 99, 1072, 1565, 2288
SduI	GDGCHC	4 cut(s)	1527, 1564, 1772, 2238
SfaNI	GCATC	3 cut(s)	210, 360, 1603
SfcI	CTRYAG	3 cut(s)	940, 1818, 2258
SfuI	TTCGAA	1 cut(s)	68
SinI	GGWCC	3 cut(s)	235, 281, 523
SmiMI	CAYNNNNRTG	3 cut(s)	196, 834, 2323
SmlI	CTYRAG	5 cut(s)	631, 1015, 1281, 1520, 1787
SmoI	CTYRAG	5 cut(s)	631, 1015, 1281, 1520, 1787
SpeI	ACTAGT	1 cut(s)	1129
SseBI	AGGCCT	3 cut(s)	151, 254, 2143
SsiI	CCGC	4 cut(s)	238, 1319, 1513, 2245
SstI	GAGCTC	1 cut(s)	2238
StuI	AGGCCT	3 cut(s)	151, 254, 2143
StyD4I	CCNGG	5 cut(s)	16, 97, 1070, 1563, 2286
TaaI	ACNGT	7 cut(s)	7, 139, 304, 586, 705, 895, 1702
TaiI	ACGT	1 cut(s)	401
TaqI	TCGA	6 cut(s)	68, 75, 204, 224, 1202, 1558
TaqII	GACCGA	1 cut(s)	269
TatI	WGTACW	1 cut(s)	737
TfiI	GAWTC	1 cut(s)	539
Tru1I	TTAA	4 cut(s)	530, 641, 686, 2338
Tru9I	TTAA	4 cut(s)	530, 641, 686, 2338
TseFI	GTSAC	4 cut(s)	52, 705, 1084, 1357
TseI	GCWGC	7 cut(s)	970, 1174, 1484, 1537, 1616, 1937, 2192
Tsp45I	GTSAC	4 cut(s)	52, 705, 1084, 1357
TspDTI	ATGAA	6 cut(s)	470, 1563, 1748, 1884, 2025, 2177
TspGWI	ACGGA	1 cut(s)	734
VpaK11BI	GGWCC	3 cut(s)	235, 281, 523
XapI	RAATTY	3 cut(s)	751, 1221, 1951
XbaI	TCTAGA	1 cut(s)	562
XceI	RCATGY	2 cut(s)	833, 2328
XmnI	GAANNNNTTC	2 cut(s)	1806, 2180
Zsp2I	ATGCAT	2 cut(s)	203, 2326

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.