Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0010077

Physical Location & Seq

Genomic Coordinates Reverse (-)

6254307 .. 6259497

Gene Structure 5191 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG086000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2664 bp

ATGACGGTCAGAACTCCTGGAACCCCAGCTTCAAAAATTGACAAGACACCAGTGACAACTCCAGCTTCGAAAATCGAGAGGACACCAGTGTCAACTCCAGGAGGGCCGAGAGCAAAGGAAGAGAAGATTGTTGTGACCGTGCGTTTGAGGCCTCTGAGCAAAAGGGAGCAATTGGCAAAAGACCAAGTTGCATGGGAATGCATCGATGATAACACCATTGTATCGAAACCTGTGGACCGCTCAACTCAACAGGCCTCATTTACATTTGATAAAGTTTTCGGTCCAAATAGTATAACCGACACTGTATATGAGGAAGGAGTGAAGAATGTAGCCTTGTCTTCTTTGATGGGCATCAATGCTACTATATTTGCTTATGGACAAACTAGCAGTGGGAAGACGTACACAATGCGAGGAATAACAGAGAAAGCTGTCATTGATATCTACAACCATATAATGAATACTCCAGAGAGAGATTTTAGAATAAAAATCTCCGGACTTGAAATATACAATGAGAATGTCAAGGACCTGTTAAATGCTGAATCTGGTCGTAATCTAAAGCTTCTAGATGATCCAGAGAAAGGTACTGTGGTTGAGAAACTGGTGGAGGAAACTGCAAGCAATGATCAGCACTTGAGACACTTAATCAGCATTTGTGAAGCTCAAAGACAAGTTGGTGAAACAGCTTTAAATGATAATAGCTCACGGTCACATCAGATAATAAGGCTGACAATTGAAAGTACACTCCGTGAAAATTCAGATTGCGTGAGATCTTTTGTTGCAAGCCTGAACTTTGTAGATCTGGCTGGAAGTGAACGAGCTTCACAGACACATACAGATGGTGCTAGGCTAAGGGAAGGTTGCCATATCAACCTTAGCCTGATGACACTTACAACTGTTATCAGAAAGCTCAGTGTTGGAAAAAGAAGTGGCCATATACCCTACAGAGACTCAAAGCTCACTCGCATATTGCAGCATTCTCTTGGTGGGAATGCACGCACTGCTATCATATGTACCTTGAGTCCAGCAATGAGTCATCTTGAACAATCTCGGAATACTCTTTACTTTGCCACCAGGGCAAAGGAAGTCACAAATAATGCACGCGTGAACATGGTTGTTTCGGACAAGCAACTAGTGAAACATTTGCAGAAGGAAGTAGCTAGGCTGGAAGCAGAGCTGCGCACCCCTGCCACCCCAGATCCATCGAGTGAAAAAGATTTGAAAATTCAGCAGATGGAAATGGAAATTGAAGAATTGAAACGCCAGAGAGATATTGCTCAATCTCAAGTAATTGAACTACGCCAAAAGCTGAAGGAGGATCCGCAGGTTTCAAATCCATTGGAATTACCCCATCCTTCAGTGACTTCAGTGAAGAAATGTCTCTCCTACACTGGTGTTCTATCAACAAAACTTGATGGCAAGGAGCTAGGCCGTGGTGATAAAGCAAGAAATATAAAGTTGAGGCAGTCTATGCGGCAATCATCGGCTGCTCCTTTTACACTAATGCACGAAATCCGCAAACTTGAGCACCTGCAAGAGCAGCTAGGAGATGAAGCAAATCGAGCCCTGGAAGTATTACAAAAGGAGGTGGCTTGTCATAGACTAGGCAACCAAGATGCAGCTGAAACAATTGCTAACCTGCAAGCAGAAATAAGAGAAATGCAGTCAGTAAGATCAGTGCCAAAAGATGTTGATGTTGGAACTGTGGTTGCTACCAACAAGAGTGTCAGTGCTAATCTAAAGGAGGAGATCACAAGACTTCATTCACAGGGCACCACTATTGCAAATCTTGAGGAACAGCTTGAAAGTGTTCAGAAGTCTATAGATAAATTGGTGATGTCTCTTCCTAGCAATTTTGAACAATGCAATAATGAAGCATTCACCAAGTCTAAGAAGGAGTCCAAAAAGAAAAAGTTATCACCTTTAGCTTCAAGCAACGCTGCCAACCTGCCAAATTTTATCAGATCACCTTGCTCACCTCTATCAGCTTCTCGTCAAATTGTAGAGTCTGATGAAATTGAAAATAGAGTTCCTGAACATGATGATACTTTGTTCAGTGATACCCAACCAGAGTCTGATAAGGGGACTCCCACAAAGAGTGAAGATTGTGGAGATGTTTCGTCAAAGGAAAACACTCCATTTAGGCCTTCTAGTTCGGTAAACATGAAGAAAATGCAGAAGATGTTCCAAAATGCAGCAGAAGAGAATGTAAGAAGCATAAGAACATATGTAACAGAGCTCAAAGAGCGGGTGGCCAAACTGCAGTACCAAAAGCAACTTCTAGTCTGCCAGGTTTTGGAGCTGGAAGCAAACGAAGCAGCTGGGTATGATATGGAGAATGATGAAATCACATGCGAGCCAGAGGAGCCCCAGGTCCCATGGCAGATAACTTTCAAGGATCAAAGGCAGCAAATCATTGAGTTATGGGACTTGTGCTATGTCTCTATCATCCATAGGACACAGTTTTATTTGTTATTCAAGGGAGATCCAGCTGATCAAATCTATATGGAAGTGGAGCTCAGGCGATTGACATGGTTGCAAGAGCATCTGGCAGAACTTGGTAATGCTAGCCCTGCTCCTCATGTGGGAGACGAGCCAGCAGTCTCTTTGTCATCAAGGTTCTATATCTTTCTCTTCTCTTTTACGTGGGAACTTGTCGATGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000280 GO:0000281 GO:0000775 GO:0000910 GO:0000911 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005694 GO:0005737 GO:0005856 GO:0005871 GO:0005875 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0007275 GO:0007349 GO:0008150 GO:0009524 GO:0009553 GO:0009555 GO:0009558 GO:0009561 GO:0009653 GO:0009987 GO:0015630 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0022607 GO:0032501 GO:0032502 GO:0032506 GO:0032991 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043515 GO:0044085 GO:0044422 GO:0044424 GO:0044427 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0048229 GO:0048285 GO:0048646 GO:0048856 GO:0051225 GO:0051301 GO:0061640 GO:0070925 GO:0071840 GO:0090307 GO:0098687 GO:0140014 GO:1902410 GO:1902850 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3490 Kinesin

Protein Analysis

887

Amino Acids

99.68

Weight (kDa)

6.18

Isoelectric Point (pI)

48.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	44 - 177	1.5e-21	Microtubule binding
Kinesin	PF00225	48 - 362	1.1e-99	Kinesin motor domain
DUF3490	PF11995	797 - 864	5.3e-28	Domain of unknown function (DUF3490)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010077)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18370
fragaria_vesca	FvH4_5g11710 FvH4_5g11710 FvH4_5g11710 FvH4_5g11710
malus_domestica	MD06G1219700.v1.1 MD14G1229400.v1.1
prunus_persica	Prupe.5G224200_v2.0.a1
pyrus_communis	pycom06g19610 pycom14g19070
rosa_chinensis	RchiOBHm_Chr7g0186051
rosa_laevigata	RLG00000004869
rosa_multiflora	Rmu_co8507379.1_g000001 Rmu_sc0000194.1_g000022
rosa_roxburghii	Rroxscaffold_3G00268470
rosa_rugosa	Rorug06G0471900
rosa_samantha	Rh7AG070000 Rh7BG086000 Rh7CG078300 Rh7DG078300
rosa_wichuraiana	Rw7G006510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1536
AasI	GACNNNNNNGTC	1 cut(s)	88
Acc16I	TGCGCA	1 cut(s)	1178
Acc36I	ACCTGC	4 cut(s)	1312, 1536, 1644, 1953
AccB1I	GGYRCC	1 cut(s)	1769
AccB7I	CCANNNNNTGG	1 cut(s)	2293
AccBSI	CCGCTC	2 cut(s)	240, 2245
AccII	CGCG	1 cut(s)	1101
AccIII	TCCGGA	1 cut(s)	491
AciI	CCGC	5 cut(s)	238, 1319, 1471, 1513, 2245
AclWI	GGATC	6 cut(s)	563, 1190, 1310, 1323, 2403, 2477
AcoI	YGGCCR	2 cut(s)	928, 2250
AcsI	RAATTY	3 cut(s)	751, 1221, 1951
AcuI	CTGAAG	3 cut(s)	1328, 1338, 1347
AdeI	CACNNNGTG	1 cut(s)	746
AfaI	GTAC	5 cut(s)	401, 583, 739, 1012, 2264
AfiI	CCNNNNNNNGG	3 cut(s)	578, 2293, 2582
AflIII	ACRYGT	1 cut(s)	1099
AhlI	ACTAGT	1 cut(s)	1129
AjnI	CCWGG	6 cut(s)	16, 97, 1070, 1563, 2286, 2367
AjuI	GAANNNNNNNTTGG	2 cut(s)	2259, 2291
Alw21I	GWGCWC	3 cut(s)	1527, 2238, 2517
Alw26I	GTCTC	7 cut(s)	628, 939, 1382, 1842, 2443, 2580, 2605
AlwI	GGATC	6 cut(s)	563, 1190, 1310, 1323, 2403, 2477
AlwNI	CAGNNNCTG	1 cut(s)	2072
Aor13HI	TCCGGA	1 cut(s)	491
AoxI	GGCC	7 cut(s)	104, 149, 252, 928, 1426, 2141, 2250
ApeKI	GCWGC	9 cut(s)	970, 1174, 1484, 1537, 1616, 1937, 2192, 2315, 2404
ApoI	RAATTY	3 cut(s)	751, 1221, 1951
ArsI	GACNNNNNNTTYG	2 cut(s)	127, 159
Asp700I	GAANNNNTTC	2 cut(s)	1806, 2180
AspLEI	GCGC	1 cut(s)	1179
AspS9I	GGNCC	5 cut(s)	104, 235, 281, 523, 2371
AsuHPI	GGTGA	7 cut(s)	686, 1445, 1843, 1870, 1908, 1956, 1965
AsuII	TTCGAA	1 cut(s)	68
AsuNHI	GCTAGC	1 cut(s)	2564
AvaII	GGWCC	4 cut(s)	235, 281, 523, 2371
BaeGI	GKGCMC	1 cut(s)	1772
BaeI	ACNNNNGTAYC	6 cut(s)	204, 237, 573, 606, 2246, 2279
BalI	TGGCCA	2 cut(s)	930, 2252
BamHI	GGATCC	1 cut(s)	1315
BanI	GGYRCC	1 cut(s)	1769
BanII	GRGCYC	4 cut(s)	1564, 2238, 2367, 2517
BbsI	GAAGAC	2 cut(s)	330, 401
Bbv12I	GWGCWC	3 cut(s)	1527, 2238, 2517
BbvI	GCAGC	9 cut(s)	982, 1161, 1471, 1549, 1628, 1924, 2204, 2327, 2416
BccI	CCATC	6 cut(s)	340, 830, 1207, 1225, 1356, 1406
BceAI	ACGGC	1 cut(s)	1413
BciT130I	CCWGG	6 cut(s)	18, 99, 1072, 1565, 2288, 2369
BclI	TGATCA	2 cut(s)	622, 2491
BcoDI	GTCTC	7 cut(s)	628, 939, 1382, 1842, 2443, 2580, 2605
BcuI	ACTAGT	1 cut(s)	1129
BfmI	CTRYAG	3 cut(s)	940, 1818, 2258
BfuAI	ACCTGC	4 cut(s)	1312, 1536, 1644, 1953
BglI	GCCNNNNNGGC	1 cut(s)	1073
BglII	AGATCT	2 cut(s)	767, 796
Bme1390I	CCNGG	6 cut(s)	18, 99, 1072, 1565, 2288, 2369
Bme18I	GGWCC	4 cut(s)	235, 281, 523, 2371
BmgT120I	GGNCC	5 cut(s)	104, 235, 281, 523, 2371
BmiI	GGNNCC	5 cut(s)	22, 1317, 1771, 2364, 2373
BmrFI	CCNGG	6 cut(s)	18, 99, 1072, 1565, 2288, 2369
BmsI	GCATC	4 cut(s)	210, 360, 1603, 2551
BmtI	GCTAGC	1 cut(s)	2568
BpiI	GAAGAC	2 cut(s)	330, 401
BpmI	CTGGAG	3 cut(s)	45, 81, 447
Bpu10I	CCTNAGC	3 cut(s)	848, 872, 2516
Bpu14I	TTCGAA	1 cut(s)	68
BpuEI	CTTGAG	5 cut(s)	652, 1036, 1266, 1541, 1808
Bsa29I	ATCGAT	1 cut(s)	204
BsaAI	YACGTR	1 cut(s)	2643
BsaBI	GATNNNNATC	1 cut(s)	350
BsaJI	CCNNGG	5 cut(s)	1071, 1429, 1563, 2367, 2375
BsaWI	WCCGGW	1 cut(s)	491
Bsc4I	CCNNNNNNNGG	3 cut(s)	578, 2293, 2582
Bse1I	ACTGG	4 cut(s)	50, 86, 603, 1393
Bse3DI	GCAATG	2 cut(s)	625, 1032
Bse8I	GATNNNNATC	1 cut(s)	350
BseAI	TCCGGA	1 cut(s)	491
BseBI	CCWGG	6 cut(s)	18, 99, 1072, 1565, 2288, 2369
BseCI	ATCGAT	1 cut(s)	204
BseDI	CCNNGG	5 cut(s)	1071, 1429, 1563, 2367, 2375
BseGI	GGATG	2 cut(s)	1348, 2445
BseJI	GATNNNNATC	1 cut(s)	350
BseLI	CCNNNNNNNGG	3 cut(s)	578, 2293, 2582
BseMI	GCAATG	2 cut(s)	625, 1032
BseMII	CTCAG	3 cut(s)	146, 922, 2530
BseNI	ACTGG	4 cut(s)	50, 86, 603, 1393
BseRI	GAGGAG	3 cut(s)	1757, 2375, 2565
BseSI	GKGCMC	1 cut(s)	1772
BseXI	GCAGC	9 cut(s)	982, 1161, 1471, 1549, 1628, 1924, 2204, 2327, 2416
BseYI	CCCAGC	2 cut(s)	25, 2318
Bsh1236I	CGCG	1 cut(s)	1101
BshFI	GGCC	7 cut(s)	106, 151, 254, 930, 1428, 2143, 2252
BshNI	GGYRCC	1 cut(s)	1769
BshVI	ATCGAT	1 cut(s)	204
BsiHKAI	GWGCWC	3 cut(s)	1527, 2238, 2517
BsiSI	CCGG	1 cut(s)	492
BslFI	GGGAC	3 cut(s)	2095, 2357, 2438
BslI	CCNNNNNNNGG	3 cut(s)	578, 2293, 2582
BsmAI	GTCTC	7 cut(s)	628, 939, 1382, 1842, 2443, 2580, 2605
BsmBI	CGTCTC	1 cut(s)	2580
BsmFI	GGGAC	3 cut(s)	2095, 2357, 2438
BsmI	GAATGC	4 cut(s)	203, 973, 994, 1874
BsnI	GGCC	7 cut(s)	106, 151, 254, 930, 1428, 2143, 2252
Bsp119I	TTCGAA	1 cut(s)	68
Bsp1286I	GDGCHC	6 cut(s)	1527, 1564, 1772, 2238, 2367, 2517
Bsp13I	TCCGGA	1 cut(s)	491
Bsp19I	CCATGG	1 cut(s)	2375
BspACI	CCGC	5 cut(s)	238, 1319, 1471, 1513, 2245
BspANI	GGCC	7 cut(s)	106, 151, 254, 930, 1428, 2143, 2252
BspCNI	CTCAG	3 cut(s)	147, 921, 2529
BspDI	ATCGAT	1 cut(s)	204
BspEI	TCCGGA	1 cut(s)	491
BspFNI	CGCG	1 cut(s)	1101
BspLI	GGNNCC	5 cut(s)	22, 1317, 1771, 2364, 2373
BspMAI	CTGCAG	1 cut(s)	2262
BspMI	ACCTGC	4 cut(s)	1312, 1536, 1644, 1953
BspOI	GCTAGC	1 cut(s)	2568
BspPI	GGATC	6 cut(s)	563, 1190, 1310, 1323, 2403, 2477
BspT104I	TTCGAA	1 cut(s)	68
BspT107I	GGYRCC	1 cut(s)	1769
BsrBI	CCGCTC	2 cut(s)	240, 2245
BsrDI	GCAATG	2 cut(s)	625, 1032
BsrI	ACTGG	4 cut(s)	50, 86, 603, 1393
BssECI	CCNNGG	5 cut(s)	1071, 1429, 1563, 2367, 2375
BssT1I	CCWWGG	1 cut(s)	2375
Bst2UI	CCWGG	6 cut(s)	18, 99, 1072, 1565, 2288, 2369
Bst4CI	ACNGT	8 cut(s)	7, 139, 304, 586, 705, 895, 1702, 2460
Bst6I	CTCTTC	4 cut(s)	114, 1845, 2193, 2636
BstAPI	GCANNNNNTGC	2 cut(s)	998, 1468
BstBAI	YACGTR	1 cut(s)	2643
BstBI	TTCGAA	1 cut(s)	68
BstC8I	GCNNGC	8 cut(s)	616, 781, 994, 1099, 1641, 2354, 2566, 2595
BstDEI	CTNAG	6 cut(s)	155, 848, 872, 908, 1887, 2516
BstDSI	CCRYGG	2 cut(s)	1429, 2375
BstF5I	GGATG	2 cut(s)	1348, 2445
BstFNI	CGCG	1 cut(s)	1101
BstHHI	GCGC	1 cut(s)	1179
BstMAI	GTCTC	7 cut(s)	628, 939, 1382, 1842, 2443, 2580, 2605
BstNI	CCWGG	6 cut(s)	18, 99, 1072, 1565, 2288, 2369
BstNSI	RCATGY	1 cut(s)	2352
BstSCI	CCNGG	6 cut(s)	16, 97, 1070, 1563, 2286, 2367
BstSFI	CTRYAG	3 cut(s)	940, 1818, 2258
BstSLI	GKGCMC	1 cut(s)	1772
BstUI	CGCG	1 cut(s)	1101
BstV1I	GCAGC	9 cut(s)	982, 1161, 1471, 1549, 1628, 1924, 2204, 2327, 2416
BstV2I	GAAGAC	2 cut(s)	330, 401
BstX2I	RGATCY	5 cut(s)	767, 796, 1195, 1315, 2482
BstYI	RGATCY	5 cut(s)	767, 796, 1195, 1315, 2482
Bsu15I	ATCGAT	1 cut(s)	204
BsuRI	GGCC	7 cut(s)	106, 151, 254, 930, 1428, 2143, 2252
BsuTUI	ATCGAT	1 cut(s)	204
BtgI	CCRYGG	2 cut(s)	1429, 2375
BtsCI	GGATG	2 cut(s)	1348, 2445
BtsI	GCAGTG	2 cut(s)	394, 996
BveI	ACCTGC	4 cut(s)	1312, 1536, 1644, 1953
Cac8I	GCNNGC	8 cut(s)	616, 781, 994, 1099, 1641, 2354, 2566, 2595
CaiI	CAGNNNCTG	1 cut(s)	2072
CfoI	GCGC	1 cut(s)	1179
Cfr13I	GGNCC	5 cut(s)	104, 235, 281, 523, 2371
ClaI	ATCGAT	1 cut(s)	204
Csp6I	GTAC	5 cut(s)	400, 582, 738, 1011, 2263
CviAII	CATG	8 cut(s)	192, 1108, 2036, 2161, 2349, 2376, 2529, 2579
CviQI	GTAC	5 cut(s)	400, 582, 738, 1011, 2263
DdeI	CTNAG	6 cut(s)	155, 848, 872, 908, 1887, 2516
DraI	TTTAAA	1 cut(s)	687
DraIII	CACNNNGTG	1 cut(s)	746
DrdI	GACNNNNNNGTC	1 cut(s)	88
DseDI	GACNNNNNNGTC	1 cut(s)	88
EaeI	YGGCCR	2 cut(s)	928, 2250
Eam1104I	CTCTTC	4 cut(s)	114, 1845, 2193, 2636
EarI	CTCTTC	4 cut(s)	114, 1845, 2193, 2636
Ecl136II	GAGCTC	2 cut(s)	2236, 2515
Eco130I	CCWWGG	1 cut(s)	2375
Eco147I	AGGCCT	3 cut(s)	151, 254, 2143
Eco24I	GRGCYC	4 cut(s)	1564, 2238, 2367, 2517
Eco32I	GATATC	1 cut(s)	439
Eco47I	GGWCC	4 cut(s)	235, 281, 523, 2371
Eco53kI	GAGCTC	2 cut(s)	2236, 2515
Eco57I	CTGAAG	3 cut(s)	1328, 1338, 1347
EcoICRI	GAGCTC	2 cut(s)	2236, 2515
EcoO109I	RGGNCCY	2 cut(s)	523, 2371
EcoRII	CCWGG	6 cut(s)	16, 97, 1070, 1563, 2286, 2367
EcoRV	GATATC	1 cut(s)	439
EcoT14I	CCWWGG	1 cut(s)	2375
EcoT22I	ATGCAT	1 cut(s)	203
EcoT38I	GRGCYC	4 cut(s)	1564, 2238, 2367, 2517
ErhI	CCWWGG	1 cut(s)	2375
Esp3I	CGTCTC	1 cut(s)	2580
FaeI	CATG	8 cut(s)	195, 1111, 2039, 2164, 2352, 2379, 2532, 2582
FaqI	GGGAC	3 cut(s)	2095, 2357, 2438
FatI	CATG	8 cut(s)	191, 1107, 2035, 2160, 2348, 2375, 2528, 2578
FauI	CCCGC	1 cut(s)	2238
FauNDI	CATATG	2 cut(s)	1007, 2224
FbaI	TGATCA	2 cut(s)	622, 2491
FokI	GGATG	2 cut(s)	1335, 2432
FriOI	GRGCYC	4 cut(s)	1564, 2238, 2367, 2517
FspI	TGCGCA	1 cut(s)	1178
GlaI	GCGC	1 cut(s)	1178
GsaI	CCCAGC	2 cut(s)	29, 2322
GsuI	CTGGAG	3 cut(s)	45, 81, 447
HaeIII	GGCC	7 cut(s)	106, 151, 254, 930, 1428, 2143, 2252
HapII	CCGG	1 cut(s)	492
HhaI	GCGC	1 cut(s)	1179
Hin1II	CATG	8 cut(s)	195, 1111, 2039, 2164, 2352, 2379, 2532, 2582
Hin6I	GCGC	1 cut(s)	1177
HinP1I	GCGC	1 cut(s)	1177
HincII	GTYRAC	1 cut(s)	93
HindII	GTYRAC	1 cut(s)	93
HindIII	AAGCTT	1 cut(s)	557
HinfI	GANTC	8 cut(s)	539, 947, 1018, 1030, 1895, 2003, 2069, 2083
HpaII	CCGG	1 cut(s)	492
HphI	GGTGA	7 cut(s)	686, 1445, 1843, 1870, 1908, 1956, 1965
Hpy166II	GTNNAC	7 cut(s)	93, 235, 402, 740, 812, 1105, 2158
Hpy188III	TCNNGA	8 cut(s)	76, 464, 492, 563, 572, 1037, 1787, 2030
Hpy8I	GTNNAC	7 cut(s)	93, 235, 402, 740, 812, 1105, 2158
HpyAV	CCTTC	7 cut(s)	308, 848, 1141, 1303, 1362, 1885, 2154
HpyCH4III	ACNGT	8 cut(s)	7, 139, 304, 586, 705, 895, 1702, 2460
HpyCH4IV	ACGT	2 cut(s)	398, 2642
HpyF3I	CTNAG	6 cut(s)	155, 848, 872, 908, 1887, 2516
HpySE526I	ACGT	2 cut(s)	398, 2642
Hsp92II	CATG	8 cut(s)	195, 1111, 2039, 2164, 2352, 2379, 2532, 2582
HspAI	GCGC	1 cut(s)	1177
Kpn2I	TCCGGA	1 cut(s)	491
Ksp22I	TGATCA	2 cut(s)	622, 2491
LmnI	GCTCC	7 cut(s)	166, 1420, 1492, 2296, 2362, 2512, 2578
Lsp1109I	GCAGC	9 cut(s)	982, 1161, 1471, 1549, 1628, 1924, 2204, 2327, 2416
LweI	GCATC	4 cut(s)	210, 360, 1603, 2551
MaeII	ACGT	2 cut(s)	398, 2642
MaeIII	GTNAC	6 cut(s)	52, 133, 705, 1084, 1357, 2227
MbiI	CCGCTC	2 cut(s)	240, 2245
MfeI	CAATTG	3 cut(s)	170, 729, 1626
MflI	RGATCY	5 cut(s)	767, 796, 1195, 1315, 2482
MhlI	GDGCHC	6 cut(s)	1527, 1564, 1772, 2238, 2367, 2517
MlsI	TGGCCA	2 cut(s)	930, 2252
MluI	ACGCGT	1 cut(s)	1099
MluNI	TGGCCA	2 cut(s)	930, 2252
MlyI	GAGTC	7 cut(s)	941, 1027, 1039, 1904, 2012, 2077, 2078
MmeI	TCCRAC	2 cut(s)	895, 1675
Mox20I	TGGCCA	2 cut(s)	930, 2252
Mph1103I	ATGCAT	1 cut(s)	203
MroI	TCCGGA	1 cut(s)	491
MroXI	GAANNNNTTC	2 cut(s)	1806, 2180
MscI	TGGCCA	2 cut(s)	930, 2252
MseI	TTAA	3 cut(s)	530, 641, 686
MslI	CAYNNNNRTG	2 cut(s)	196, 834
Msp20I	TGGCCA	2 cut(s)	930, 2252
MspA1I	CMGCKG	3 cut(s)	1619, 2318, 2489
MspI	CCGG	1 cut(s)	492
MspR9I	CCNGG	6 cut(s)	18, 99, 1072, 1565, 2288, 2369
MunI	CAATTG	3 cut(s)	170, 729, 1626
Mva1269I	GAATGC	4 cut(s)	203, 973, 994, 1874
MvaI	CCWGG	6 cut(s)	18, 99, 1072, 1565, 2288, 2369
MvnI	CGCG	1 cut(s)	1101
NcoI	CCATGG	1 cut(s)	2375
NdeI	CATATG	2 cut(s)	1007, 2224
NheI	GCTAGC	1 cut(s)	2564
NlaIII	CATG	8 cut(s)	195, 1111, 2039, 2164, 2352, 2379, 2532, 2582
NlaIV	GGNNCC	5 cut(s)	22, 1317, 1771, 2364, 2373
NmeAIII	GCCGAG	1 cut(s)	132
NmuCI	GTSAC	5 cut(s)	52, 133, 705, 1084, 1357
NsbI	TGCGCA	1 cut(s)	1178
NsiI	ATGCAT	1 cut(s)	203
NspI	RCATGY	1 cut(s)	2352
NspV	TTCGAA	1 cut(s)	68
PaqCI	CACCTGC	1 cut(s)	1536
PceI	AGGCCT	3 cut(s)	151, 254, 2143
PctI	GAATGC	4 cut(s)	203, 973, 994, 1874
PdmI	GAANNNNTTC	2 cut(s)	1806, 2180
PfeI	GAWTC	1 cut(s)	539
PflMI	CCANNNNNTGG	1 cut(s)	2293
PfoI	TCCNGGA	2 cut(s)	16, 97
PleI	GAGTC	7 cut(s)	941, 1026, 1038, 1903, 2011, 2077, 2077
PpsI	GAGTC	7 cut(s)	941, 1026, 1038, 1903, 2011, 2077, 2077
Ppu21I	YACGTR	1 cut(s)	2643
PpuMI	RGGWCCY	2 cut(s)	523, 2371
Psp124BI	GAGCTC	2 cut(s)	2238, 2517
Psp5II	RGGWCCY	2 cut(s)	523, 2371
Psp6I	CCWGG	6 cut(s)	16, 97, 1070, 1563, 2286, 2367
PspFI	CCCAGC	2 cut(s)	25, 2318
PspGI	CCWGG	6 cut(s)	16, 97, 1070, 1563, 2286, 2367
PspN4I	GGNNCC	5 cut(s)	22, 1317, 1771, 2364, 2373
PspPI	GGNCC	5 cut(s)	104, 235, 281, 523, 2371
PspPPI	RGGWCCY	2 cut(s)	523, 2371
PstI	CTGCAG	1 cut(s)	2262
PstNI	CAGNNNCTG	1 cut(s)	2072
PsuI	RGATCY	5 cut(s)	767, 796, 1195, 1315, 2482
PvuII	CAGCTG	3 cut(s)	1619, 2318, 2489
RsaI	GTAC	5 cut(s)	401, 583, 739, 1012, 2264
RsaNI	GTAC	5 cut(s)	400, 582, 738, 1011, 2263
RseI	CAYNNNNRTG	2 cut(s)	196, 834
SacI	GAGCTC	2 cut(s)	2238, 2517
SaqAI	TTAA	3 cut(s)	530, 641, 686
Sau96I	GGNCC	5 cut(s)	104, 235, 281, 523, 2371
SchI	GAGTC	7 cut(s)	941, 1027, 1039, 1904, 2012, 2077, 2078
ScrFI	CCNGG	6 cut(s)	18, 99, 1072, 1565, 2288, 2369
SduI	GDGCHC	6 cut(s)	1527, 1564, 1772, 2238, 2367, 2517
SfaNI	GCATC	4 cut(s)	210, 360, 1603, 2551
SfcI	CTRYAG	3 cut(s)	940, 1818, 2258
SfuI	TTCGAA	1 cut(s)	68
SinI	GGWCC	4 cut(s)	235, 281, 523, 2371
SmiMI	CAYNNNNRTG	2 cut(s)	196, 834
SmlI	CTYRAG	5 cut(s)	631, 1015, 1281, 1520, 1787
SmoI	CTYRAG	5 cut(s)	631, 1015, 1281, 1520, 1787
SpeI	ACTAGT	1 cut(s)	1129
SseBI	AGGCCT	3 cut(s)	151, 254, 2143
SsiI	CCGC	5 cut(s)	238, 1319, 1471, 1513, 2245
SstI	GAGCTC	2 cut(s)	2238, 2517
StuI	AGGCCT	3 cut(s)	151, 254, 2143
StyD4I	CCNGG	6 cut(s)	16, 97, 1070, 1563, 2286, 2367
StyI	CCWWGG	1 cut(s)	2375
TaaI	ACNGT	8 cut(s)	7, 139, 304, 586, 705, 895, 1702, 2460
TaiI	ACGT	2 cut(s)	401, 2645
TaqI	TCGA	7 cut(s)	68, 75, 204, 224, 1202, 1558, 2655
TaqII	GACCGA	1 cut(s)	269
TatI	WGTACW	1 cut(s)	737
TauI	GCSGC	1 cut(s)	1474
TfiI	GAWTC	1 cut(s)	539
Tru1I	TTAA	3 cut(s)	530, 641, 686
Tru9I	TTAA	3 cut(s)	530, 641, 686
TseFI	GTSAC	5 cut(s)	52, 133, 705, 1084, 1357
TseI	GCWGC	9 cut(s)	970, 1174, 1484, 1537, 1616, 1937, 2192, 2315, 2404
Tsp45I	GTSAC	5 cut(s)	52, 133, 705, 1084, 1357
TspDTI	ATGAA	7 cut(s)	470, 1563, 1748, 1884, 2025, 2177, 2355
TspGWI	ACGGA	1 cut(s)	734
Van91I	CCANNNNNTGG	1 cut(s)	2293
VpaK11BI	GGWCC	4 cut(s)	235, 281, 523, 2371
XapI	RAATTY	3 cut(s)	751, 1221, 1951
XbaI	TCTAGA	1 cut(s)	562
XceI	RCATGY	1 cut(s)	2352
XmnI	GAANNNNTTC	2 cut(s)	1806, 2180
Zsp2I	ATGCAT	1 cut(s)	203

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.