Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0015109

Physical Location & Seq

Genomic Coordinates Forward (+)

35416223 .. 35419145

Gene Structure 2923 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1222800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1491 bp

ATGGAGAGAGAAGACAACAAACCATCTCTAAGCTCGCCATTGATTCAAGCTTGCGAAGAAGATGTAACTAAGGAGACTGGGAGAAATAACCATGGAATAAAGGGATTTAAGAGAAAGGAAATAGTTGAAGAAGTGAAGAAGCAGATATGGCTAGCAGGACCTCTTATCTGTGTGAGCTTATTGCAGTACTCTACACAGATAATAGCTATTATGTTTGTAGGTCACCTTGGTGAGTTATCTCTCTCCGGTGCTACCATGGCCCTTTCCTTCACTTCCGTCACCGGTTTCAGCTTGTTGATGGGAATGTCAAGCGCATTGGACACATTATCCGGCCAGTGCTATGGTGCAAAGCAGTACCGTCTGATGGGCATACACATGCAGAGAGCAATGCTTGTTCTTTCACTTGTTTGCGTACCTCTCGCCATCATTTCCGCAAACACAAAAACAATCCTAACAGCTCTAGGCCAAAATGCTGCCATTGCAGCAGAAGCTGGGGAATTTGCGCACTTCACGATCCCTTCCCTTTTCGCATACGGACTCCTCCAGTGCCTCGTCAGATTCTTACAAACTCAAAACATCGTGTTCCCGATGATGCTGAGCTCTGCGGTTACAGCTTTACTTCACATCCCTCTCTGTTGGGTTCTTGTGTTTAAATCCGGACTTGGAGGCAGGGGAGCTGCCCTGGCAATTTCAATCTCCTTTTGGATCAATGTGTTATTATTGGCGCTTTATGTCAAGTTCTCTTCATCATGTGCGAAAACTTGGACAGGCTTTTCGAAGGAGGCTTTTCAGAACGTTACTACATTCATTAGGCTTGCTGTTCCTTCAGCCGTCATGGTTTGCTTGGAAATGTGGTCGTTTGAAATGATTGTTCTTCTATCCGGTCTTCTTCCAAACCCGGAGTTGGAAACCTCAGTGCTTTCTATCAGTTTGAATACAGCGGCAATGGTTTGGATGATCCCTTTCGGACTCAGTTCTGCTGTGAGCACTCGCGTCTCCAATGAATTAGGAGCAGGGCGTCCAGAAACAGCGCGCTTAGCAGTGTGTGTTGTGTTAGTCATGGCCATTACCGAGGGTATATTGGTGGGATCGGTCCTGATACTGATACGCAACTTCTGGGGCTACGCTTACAGCAACGAAAGAGAAGTTATCGATTACCTTGCAACCATGATGCCTATACTTGCAACATCCAACTTTCTAGACGGCCTCCAGTGTGTTCTTTCGGGTACCGCTAGAGGATGTGGCTGGCAGAAGATTGGAGCGTATGTGAATCTCGGGGCGTACTACTTAGTTGGAATTCCTTTGGCTATTTTGATGGCTTTCGTCCTTCATGTTGGTGGAAAGGGGCTCTGGCTGGGGATCATCTGCGCACTGATTGTGCAAGTGTTGTTGCTTCTTACCGTAACCATACGCACGAACTGGGAGAAAGAGGCAAATAAGGCTACAGAAAGAGTGTACGAATCAACAGTTCCCGTGGACGTAGTCACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006855 GO:0008150 GO:0009605 GO:0009607 GO:0009624 GO:0015238 GO:0015893 GO:0016020 GO:0022857 GO:0031090 GO:0042221 GO:0042493 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

497

Amino Acids

53.76

Weight (kDa)

7.93

Isoelectric Point (pI)

25.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	54 - 214	6.3e-34	MatE
MatE	PF01554	275 - 437	7.9e-30	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015109)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52450
fragaria_vesca	FvH4_5g16890 FvH4_5g16890
malus_domestica	MD06G1222800.v1.1
prunus_persica	Prupe.5G227700_v2.0.a1
pyrus_communis	pycom06g19860
rosa_chinensis	RchiOBHm_Chr7g0179161
rosa_laevigata	RLG00000005380
rosa_multiflora	Rmu_sc0000888.1_g000021
rosa_roxburghii	Rroxscaffold_3G00274250
rosa_rugosa	Rorug06G0421700
rosa_samantha	Rh7AG020600 Rh7BG020900 Rh7CG022000 Rh7DG021500
rosa_wichuraiana	Rw7G001740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	504, 1369
Acc65I	GGTACC	1 cut(s)	1226
AccB1I	GGYRCC	1 cut(s)	1226
AccII	CGCG	2 cut(s)	993, 1033
AccIII	TCCGGA	1 cut(s)	656
AciI	CCGC	4 cut(s)	432, 605, 941, 1230
AclI	AACGTT	1 cut(s)	795
AclWI	GGATC	5 cut(s)	508, 713, 952, 1096, 1367
AcoI	YGGCCR	2 cut(s)	331, 1062
AcsI	RAATTY	2 cut(s)	497, 1296
AcuI	CTGAAG	1 cut(s)	810
AcyI	GRCGYC	1 cut(s)	1018
AfaI	GTAC	6 cut(s)	188, 356, 414, 1228, 1283, 1457
AfiI	CCNNNNNNNGG	2 cut(s)	364, 904
AgeI	ACCGGT	1 cut(s)	281
AgsI	TTSAA	5 cut(s)	47, 128, 693, 863, 934
AjnI	CCWGG	1 cut(s)	681
AleI	CACNNNNGTG	1 cut(s)	228
Alw21I	GWGCWC	2 cut(s)	602, 989
Alw26I	GTCTC	2 cut(s)	68, 1000
AlwI	GGATC	5 cut(s)	508, 713, 952, 1096, 1367
AlwNI	CAGNNNCTG	1 cut(s)	491
Ama87I	CYCGRG	1 cut(s)	1274
Aor13HI	TCCGGA	1 cut(s)	656
AoxI	GGCC	5 cut(s)	258, 331, 463, 1062, 1204
ApeKI	GCWGC	3 cut(s)	473, 482, 677
ApoI	RAATTY	2 cut(s)	497, 1296
ArsI	GACNNNNNNTTYG	2 cut(s)	757, 789
AsiGI	ACCGGT	1 cut(s)	281
Asp718I	GGTACC	1 cut(s)	1226
AspLEI	GCGC	6 cut(s)	314, 505, 727, 1033, 1035, 1370
AspS9I	GGNCC	3 cut(s)	158, 259, 1093
AsuC2I	CCSGG	1 cut(s)	899
AsuHPI	GGTGA	3 cut(s)	215, 242, 271
AsuII	TTCGAA	1 cut(s)	776
AsuNHI	GCTAGC	1 cut(s)	151
AvaI	CYCGRG	1 cut(s)	1274
AvaII	GGWCC	2 cut(s)	158, 1093
BalI	TGGCCA	1 cut(s)	1064
BanI	GGYRCC	1 cut(s)	1226
BanII	GRGCYC	2 cut(s)	602, 1350
BbsI	GAAGAC	2 cut(s)	18, 878
Bbv12I	GWGCWC	2 cut(s)	602, 989
BbvI	GCAGC	3 cut(s)	460, 494, 664
BccI	CCATC	5 cut(s)	31, 292, 358, 431, 1309
BceAI	ACGGC	2 cut(s)	815, 1219
BcgI	CGANNNNNNTGC	2 cut(s)	1142, 1176
BciT130I	CCWGG	1 cut(s)	683
BcnI	CCSGG	1 cut(s)	899
BcoDI	GTCTC	2 cut(s)	68, 1000
BfaI	CTAG	4 cut(s)	152, 461, 1199, 1233
BfmI	CTRYAG	1 cut(s)	1443
BfoI	RGCGCY	1 cut(s)	728
BisI	GCNGC	4 cut(s)	474, 483, 678, 942
BlpI	GCTNAGC	2 cut(s)	596, 1036
BlsI	GCNGC	4 cut(s)	475, 484, 679, 943
BmcAI	AGTACT	1 cut(s)	188
Bme1390I	CCNGG	2 cut(s)	683, 899
Bme18I	GGWCC	2 cut(s)	158, 1093
BmeT110I	CYCGRG	1 cut(s)	1274
BmgT120I	GGNCC	3 cut(s)	158, 259, 1093
BmiI	GGNNCC	1 cut(s)	1228
BmrFI	CCNGG	2 cut(s)	683, 899
BmrI	ACTGGG	2 cut(s)	87, 1429
BmsI	GCATC	2 cut(s)	582, 1161
BmtI	GCTAGC	1 cut(s)	155
BmuI	ACTGGG	2 cut(s)	87, 1429
BpiI	GAAGAC	2 cut(s)	18, 878
BpmI	CTGGAG	2 cut(s)	527, 1193
Bpu1102I	GCTNAGC	2 cut(s)	596, 1036
Bpu14I	TTCGAA	1 cut(s)	776
BpuMI	CCSGG	1 cut(s)	899
Bsa29I	ATCGAT	1 cut(s)	1152
BsaHI	GRCGYC	1 cut(s)	1018
BsaJI	CCNNGG	6 cut(s)	91, 226, 255, 681, 1071, 1473
BsaWI	WCCGGW	4 cut(s)	245, 281, 656, 881
BsaXI	ACNNNNNCTCC	2 cut(s)	1251, 1281
Bsc4I	CCNNNNNNNGG	2 cut(s)	364, 904
Bse118I	RCCGGY	1 cut(s)	281
Bse1I	ACTGG	5 cut(s)	82, 334, 544, 1210, 1424
Bse3DI	GCAATG	3 cut(s)	393, 477, 951
BseAI	TCCGGA	1 cut(s)	656
BseBI	CCWGG	1 cut(s)	683
BseCI	ATCGAT	1 cut(s)	1152
BseDI	CCNNGG	6 cut(s)	91, 226, 255, 681, 1071, 1473
BseGI	GGATG	4 cut(s)	624, 960, 1187, 1244
BseLI	CCNNNNNNNGG	2 cut(s)	364, 904
BseMI	GCAATG	3 cut(s)	393, 477, 951
BseMII	CTCAG	3 cut(s)	587, 927, 985
BseNI	ACTGG	5 cut(s)	82, 334, 544, 1210, 1424
BsePI	GCGCGC	1 cut(s)	1031
BseRI	GAGGAG	1 cut(s)	530
BseXI	GCAGC	3 cut(s)	460, 494, 664
BseYI	CCCAGC	2 cut(s)	491, 1354
Bsh1236I	CGCG	2 cut(s)	993, 1033
BshFI	GGCC	5 cut(s)	260, 333, 465, 1064, 1206
BshNI	GGYRCC	1 cut(s)	1226
BshTI	ACCGGT	1 cut(s)	281
BshVI	ATCGAT	1 cut(s)	1152
BsiHKAI	GWGCWC	2 cut(s)	602, 989
BsiHKCI	CYCGRG	1 cut(s)	1274
BsiSI	CCGG	6 cut(s)	246, 282, 330, 657, 882, 899
BslI	CCNNNNNNNGG	2 cut(s)	364, 904
BsmAI	GTCTC	2 cut(s)	68, 1000
BsmBI	CGTCTC	1 cut(s)	1000
BsnI	GGCC	5 cut(s)	260, 333, 465, 1064, 1206
BsoBI	CYCGRG	1 cut(s)	1274
Bsp119I	TTCGAA	1 cut(s)	776
Bsp1286I	GDGCHC	3 cut(s)	602, 989, 1350
Bsp13I	TCCGGA	1 cut(s)	656
Bsp143I	GATC	5 cut(s)	513, 705, 957, 1088, 1359
Bsp1720I	GCTNAGC	2 cut(s)	596, 1036
Bsp19I	CCATGG	2 cut(s)	91, 255
BspACI	CCGC	4 cut(s)	432, 605, 941, 1230
BspANI	GGCC	5 cut(s)	260, 333, 465, 1064, 1206
BspCNI	CTCAG	3 cut(s)	588, 926, 984
BspDI	ATCGAT	1 cut(s)	1152
BspEI	TCCGGA	1 cut(s)	656
BspFNI	CGCG	2 cut(s)	993, 1033
BspLI	GGNNCC	1 cut(s)	1228
BspOI	GCTAGC	1 cut(s)	155
BspPI	GGATC	5 cut(s)	508, 713, 952, 1096, 1367
BspT104I	TTCGAA	1 cut(s)	776
BspT107I	GGYRCC	1 cut(s)	1226
BsrDI	GCAATG	3 cut(s)	393, 477, 951
BsrFI	RCCGGY	1 cut(s)	281
BsrI	ACTGG	5 cut(s)	82, 334, 544, 1210, 1424
BssAI	RCCGGY	1 cut(s)	281
BssECI	CCNNGG	6 cut(s)	91, 226, 255, 681, 1071, 1473
BssHII	GCGCGC	1 cut(s)	1031
BssMI	GATC	5 cut(s)	513, 705, 957, 1088, 1359
BssNI	GRCGYC	1 cut(s)	1018
BssT1I	CCWWGG	3 cut(s)	91, 226, 255
Bst2UI	CCWGG	1 cut(s)	683
Bst4CI	ACNGT	3 cut(s)	359, 1402, 1468
Bst6I	CTCTTC	1 cut(s)	748
BstACI	GRCGYC	1 cut(s)	1018
BstBI	TTCGAA	1 cut(s)	776
BstC8I	GCNNGC	6 cut(s)	35, 52, 153, 816, 1033, 1247
BstDEI	CTNAG	7 cut(s)	29, 69, 596, 913, 971, 1036, 1288
BstDSI	CCRYGG	3 cut(s)	91, 255, 1473
BstEII	GGTNACC	1 cut(s)	221
BstF5I	GGATG	4 cut(s)	624, 960, 1187, 1244
BstFNI	CGCG	2 cut(s)	993, 1033
BstH2I	RGCGCY	1 cut(s)	728
BstHHI	GCGC	6 cut(s)	314, 505, 727, 1033, 1035, 1370
BstKTI	GATC	5 cut(s)	516, 708, 960, 1091, 1362
BstMAI	GTCTC	2 cut(s)	68, 1000
BstMBI	GATC	5 cut(s)	513, 705, 957, 1088, 1359
BstMWI	GCNNNNNNNGC	9 cut(s)	148, 257, 479, 482, 488, 611, 683, 1037, 1439
BstNI	CCWGG	1 cut(s)	683
BstNSI	RCATGY	1 cut(s)	379
BstPI	GGTNACC	1 cut(s)	221
BstSCI	CCNGG	2 cut(s)	681, 897
BstSFI	CTRYAG	1 cut(s)	1443
BstUI	CGCG	2 cut(s)	993, 1033
BstV1I	GCAGC	3 cut(s)	460, 494, 664
BstV2I	GAAGAC	2 cut(s)	18, 878
BstXI	CCANNNNNNTGG	1 cut(s)	341
Bsu15I	ATCGAT	1 cut(s)	1152
BsuRI	GGCC	5 cut(s)	260, 333, 465, 1064, 1206
BsuTUI	ATCGAT	1 cut(s)	1152
BtgI	CCRYGG	3 cut(s)	91, 255, 1473
BtsCI	GGATG	4 cut(s)	624, 960, 1187, 1244
BtsI	GCAGTG	1 cut(s)	1047
BtsIMutI	CAGTG	6 cut(s)	341, 551, 921, 1047, 1217, 1370
Cac8I	GCNNGC	6 cut(s)	35, 52, 153, 816, 1033, 1247
CaiI	CAGNNNCTG	1 cut(s)	491
CfoI	GCGC	6 cut(s)	314, 505, 727, 1033, 1035, 1370
Cfr10I	RCCGGY	1 cut(s)	281
Cfr13I	GGNCC	3 cut(s)	158, 259, 1093
ClaI	ATCGAT	1 cut(s)	1152
CseI	GACGC	2 cut(s)	982, 1007
Csp6I	GTAC	6 cut(s)	187, 355, 413, 1227, 1282, 1456
CspAI	ACCGGT	1 cut(s)	281
CviAII	CATG	8 cut(s)	92, 256, 376, 750, 835, 1060, 1168, 1331
CviQI	GTAC	6 cut(s)	187, 355, 413, 1227, 1282, 1456
DdeI	CTNAG	7 cut(s)	29, 69, 596, 913, 971, 1036, 1288
DpnI	GATC	5 cut(s)	515, 707, 959, 1090, 1361
DpnII	GATC	5 cut(s)	513, 705, 957, 1088, 1359
DraI	TTTAAA	1 cut(s)	652
EaeI	YGGCCR	2 cut(s)	331, 1062
Eam1104I	CTCTTC	1 cut(s)	748
EarI	CTCTTC	1 cut(s)	748
Ecl136II	GAGCTC	1 cut(s)	600
Eco130I	CCWWGG	3 cut(s)	91, 226, 255
Eco24I	GRGCYC	2 cut(s)	602, 1350
Eco47I	GGWCC	2 cut(s)	158, 1093
Eco53kI	GAGCTC	1 cut(s)	600
Eco57I	CTGAAG	1 cut(s)	810
Eco88I	CYCGRG	1 cut(s)	1274
Eco91I	GGTNACC	1 cut(s)	221
EcoICRI	GAGCTC	1 cut(s)	600
EcoO109I	RGGNCCY	1 cut(s)	158
EcoO65I	GGTNACC	1 cut(s)	221
EcoRI	GAATTC	1 cut(s)	1296
EcoRII	CCWGG	1 cut(s)	681
EcoT14I	CCWWGG	3 cut(s)	91, 226, 255
EcoT38I	GRGCYC	2 cut(s)	602, 1350
ErhI	CCWWGG	3 cut(s)	91, 226, 255
Esp3I	CGTCTC	1 cut(s)	1000
FaeI	CATG	8 cut(s)	95, 259, 379, 753, 838, 1063, 1171, 1334
FatI	CATG	8 cut(s)	91, 255, 375, 749, 834, 1059, 1167, 1330
Fnu4HI	GCNGC	4 cut(s)	474, 483, 678, 942
FokI	GGATG	4 cut(s)	611, 967, 1174, 1251
FriOI	GRGCYC	2 cut(s)	602, 1350
Fsp4HI	GCNGC	4 cut(s)	474, 483, 678, 942
FspBI	CTAG	4 cut(s)	152, 461, 1199, 1233
FspI	TGCGCA	2 cut(s)	504, 1369
GlaI	GCGC	6 cut(s)	313, 504, 726, 1032, 1034, 1369
GluI	GCNGC	4 cut(s)	474, 483, 678, 942
GsaI	CCCAGC	2 cut(s)	495, 1358
GsuI	CTGGAG	2 cut(s)	527, 1193
HaeII	RGCGCY	1 cut(s)	728
HaeIII	GGCC	5 cut(s)	260, 333, 465, 1064, 1206
HapII	CCGG	6 cut(s)	246, 282, 330, 657, 882, 899
HgaI	GACGC	2 cut(s)	982, 1007
HhaI	GCGC	6 cut(s)	314, 505, 727, 1033, 1035, 1370
Hin1I	GRCGYC	1 cut(s)	1018
Hin1II	CATG	8 cut(s)	95, 259, 379, 753, 838, 1063, 1171, 1334
Hin6I	GCGC	6 cut(s)	312, 503, 725, 1031, 1033, 1368
HinP1I	GCGC	6 cut(s)	312, 503, 725, 1031, 1033, 1368
HindIII	AAGCTT	1 cut(s)	48
HinfI	GANTC	6 cut(s)	43, 537, 558, 969, 1270, 1460
HpaII	CCGG	6 cut(s)	246, 282, 330, 657, 882, 899
HphI	GGTGA	3 cut(s)	215, 242, 271
Hpy166II	GTNNAC	2 cut(s)	1456, 1477
Hpy188I	TCNGA	4 cut(s)	363, 557, 792, 968
Hpy188III	TCNNGA	6 cut(s)	511, 586, 657, 1022, 1096, 1199
Hpy8I	GTNNAC	2 cut(s)	1456, 1477
HpyAV	CCTTC	5 cut(s)	277, 528, 772, 834, 1337
HpyCH4III	ACNGT	3 cut(s)	359, 1402, 1468
HpyCH4IV	ACGT	2 cut(s)	795, 1479
HpyCH4V	TGCA	7 cut(s)	184, 347, 379, 482, 1163, 1184, 1381
HpyF10VI	GCNNNNNNNGC	9 cut(s)	148, 257, 479, 482, 488, 611, 683, 1037, 1439
HpyF3I	CTNAG	7 cut(s)	29, 69, 596, 913, 971, 1036, 1288
HpySE526I	ACGT	2 cut(s)	795, 1479
Hsp92I	GRCGYC	1 cut(s)	1018
Hsp92II	CATG	8 cut(s)	95, 259, 379, 753, 838, 1063, 1171, 1334
HspAI	GCGC	6 cut(s)	312, 503, 725, 1031, 1033, 1368
Kpn2I	TCCGGA	1 cut(s)	656
KpnI	GGTACC	1 cut(s)	1230
Kzo9I	GATC	5 cut(s)	513, 705, 957, 1088, 1359
LmnI	GCTCC	3 cut(s)	674, 1010, 1259
Lsp1109I	GCAGC	3 cut(s)	460, 494, 664
LweI	GCATC	2 cut(s)	582, 1161
MaeI	CTAG	4 cut(s)	152, 461, 1199, 1233
MaeII	ACGT	2 cut(s)	795, 1479
MaeIII	GTNAC	7 cut(s)	64, 221, 277, 607, 796, 1402, 1483
MalI	GATC	5 cut(s)	515, 707, 959, 1090, 1361
MboI	GATC	5 cut(s)	513, 705, 957, 1088, 1359
MhlI	GDGCHC	3 cut(s)	602, 989, 1350
MlsI	TGGCCA	1 cut(s)	1064
MluCI	AATT	4 cut(s)	497, 687, 1004, 1296
MluNI	TGGCCA	1 cut(s)	1064
MlyI	GAGTC	2 cut(s)	531, 963
MmeI	TCCRAC	3 cut(s)	885, 1215, 1273
Mox20I	TGGCCA	1 cut(s)	1064
MroI	TCCGGA	1 cut(s)	656
MscI	TGGCCA	1 cut(s)	1064
MseI	TTAA	2 cut(s)	108, 651
MslI	CAYNNNNRTG	3 cut(s)	228, 374, 1335
Msp20I	TGGCCA	1 cut(s)	1064
MspA1I	CMGCKG	1 cut(s)	941
MspI	CCGG	6 cut(s)	246, 282, 330, 657, 882, 899
MspR9I	CCNGG	2 cut(s)	683, 899
MvaI	CCWGG	1 cut(s)	683
MvnI	CGCG	2 cut(s)	993, 1033
MwoI	GCNNNNNNNGC	9 cut(s)	148, 257, 479, 482, 488, 611, 683, 1037, 1439
NciI	CCSGG	1 cut(s)	899
NcoI	CCATGG	2 cut(s)	91, 255
NdeII	GATC	5 cut(s)	513, 705, 957, 1088, 1359
NheI	GCTAGC	1 cut(s)	151
NlaIII	CATG	8 cut(s)	95, 259, 379, 753, 838, 1063, 1171, 1334
NlaIV	GGNNCC	1 cut(s)	1228
NmuCI	GTSAC	3 cut(s)	221, 277, 1483
NsbI	TGCGCA	2 cut(s)	504, 1369
NspI	RCATGY	1 cut(s)	379
NspV	TTCGAA	1 cut(s)	776
OliI	CACNNNNGTG	1 cut(s)	228
PauI	GCGCGC	1 cut(s)	1031
PfeI	GAWTC	4 cut(s)	43, 558, 1270, 1460
PflFI	GACNNNGTC	1 cut(s)	1481
PinAI	ACCGGT	1 cut(s)	281
PkrI	GCNGC	4 cut(s)	475, 484, 679, 943
PleI	GAGTC	2 cut(s)	531, 963
PpsI	GAGTC	2 cut(s)	531, 963
PpuMI	RGGWCCY	1 cut(s)	158
Psp124BI	GAGCTC	1 cut(s)	602
Psp1406I	AACGTT	1 cut(s)	795
Psp5II	RGGWCCY	1 cut(s)	158
Psp6I	CCWGG	1 cut(s)	681
PspEI	GGTNACC	1 cut(s)	221
PspFI	CCCAGC	2 cut(s)	491, 1354
PspGI	CCWGG	1 cut(s)	681
PspN4I	GGNNCC	1 cut(s)	1228
PspPI	GGNCC	3 cut(s)	158, 259, 1093
PspPPI	RGGWCCY	1 cut(s)	158
PstNI	CAGNNNCTG	1 cut(s)	491
PsyI	GACNNNGTC	1 cut(s)	1481
PteI	GCGCGC	1 cut(s)	1031
RsaI	GTAC	6 cut(s)	188, 356, 414, 1228, 1283, 1457
RsaNI	GTAC	6 cut(s)	187, 355, 413, 1227, 1282, 1456
RseI	CAYNNNNRTG	3 cut(s)	228, 374, 1335
SacI	GAGCTC	1 cut(s)	602
SaqAI	TTAA	2 cut(s)	108, 651
SatI	GCNGC	4 cut(s)	474, 483, 678, 942
Sau3AI	GATC	5 cut(s)	513, 705, 957, 1088, 1359
Sau96I	GGNCC	3 cut(s)	158, 259, 1093
ScaI	AGTACT	1 cut(s)	188
SchI	GAGTC	2 cut(s)	531, 963
ScrFI	CCNGG	2 cut(s)	683, 899
SduI	GDGCHC	3 cut(s)	602, 989, 1350
SfaNI	GCATC	2 cut(s)	582, 1161
SfcI	CTRYAG	1 cut(s)	1443
SfuI	TTCGAA	1 cut(s)	776
SinI	GGWCC	2 cut(s)	158, 1093
SmiMI	CAYNNNNRTG	3 cut(s)	228, 374, 1335
Sse9I	AATT	4 cut(s)	497, 687, 1004, 1296
SsiI	CCGC	4 cut(s)	432, 605, 941, 1230
SspMI	CTAG	4 cut(s)	152, 461, 1199, 1233
SstI	GAGCTC	1 cut(s)	602
StyD4I	CCNGG	2 cut(s)	681, 897
StyI	CCWWGG	3 cut(s)	91, 226, 255
TaaI	ACNGT	3 cut(s)	359, 1402, 1468
TaiI	ACGT	2 cut(s)	798, 1482
TaqI	TCGA	2 cut(s)	776, 1152
TaqII	GACCGA	1 cut(s)	1081
TasI	AATT	4 cut(s)	497, 687, 1004, 1296
TatI	WGTACW	1 cut(s)	186
TauI	GCSGC	1 cut(s)	944
TfiI	GAWTC	4 cut(s)	43, 558, 1270, 1460
Tru1I	TTAA	2 cut(s)	108, 651
Tru9I	TTAA	2 cut(s)	108, 651
TscAI	CASTG	6 cut(s)	341, 551, 921, 1047, 1217, 1377
TseFI	GTSAC	3 cut(s)	221, 277, 1483
TseI	GCWGC	3 cut(s)	473, 482, 677
Tsp45I	GTSAC	3 cut(s)	221, 277, 1483
TspDTI	ATGAA	4 cut(s)	735, 796, 1017, 1319
TspGWI	ACGGA	2 cut(s)	265, 549
TspRI	CASTG	6 cut(s)	341, 551, 921, 1047, 1217, 1377
Tth111I	GACNNNGTC	1 cut(s)	1481
VpaK11BI	GGWCC	2 cut(s)	158, 1093
XapI	RAATTY	2 cut(s)	497, 1296
XbaI	TCTAGA	1 cut(s)	1198
XceI	RCATGY	1 cut(s)	379
XspI	CTAG	4 cut(s)	152, 461, 1199, 1233
ZrmI	AGTACT	1 cut(s)	188

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.