Prupe.5G227700_v2.0.a1

Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
17504607 .. 17508323
3717 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G227700.1

Sequence Viewer

Length: 1500 bp
ATGGGGACAGAAGACCACACACCACCATCTCTGAGCTCACCGTTGATTCAAGTCTGTGAAGAAGATGATGCAGTTAAGGAGATTGAAAAACACGAGGGAAGCCATGGAAGGGGTTTTAAGAGAAAGGAAATTGTTGAAGAAGTAAAGAAGCAGTTATGGCTAGCAGGGCCTCTTATATGTGTGAGTCTGTTACAGTACTCTGTACAGATAATAGCTGTTATGTTTGTAGGTCATCTTGGTGAATTGTCTCTCTCTGGTGCTTCCATGGCCCTTTCCTTTTCATCCGTCACCGGTTTCAGCTTGCTAATGGGAATGTCAAGTGCACTGGATACATTATGTGGACAGTGCTATGGTGCAAAGCAGTATCATATGATGGGCATACACATGCAGAGAGCCATGCTTGTTCTTTCAATTGTTTGCATACCCCTTGCTATCATTTCCGCAAACACAAGAATCATTCTAACAGCTCTTGGCCAAGATGCTGCCATAGCAGCACAAGCCGGACAATTTGCCCGTTTCCTGATCCCTTCCCTTTTTGCATATGGACTTCTTCAGTGCCTTGTGAGGTTCTTACAAACTCAAAACATTGTGTTCCCAATGATGCTGAGCTCTGCCATTACAGCTTTGCTGCACATCCCTCTCTGTTGGATTCTTGTGTTTACATCTGGACTTGGAAGCAGGGGAGCTGCCTTGGCAGTTTCAATCTCTTTTTGGATCAATGTGCTATTATTGGCACTTTATGTCAGGTTCTCTTCATTATGTTCCAAAACTTGGACAGGCTTCTCGAAGGAGGCATTTCACAACATTATTCCATTTGTTAGACTCGCTATTCCTTCAGCTGTGATGGTCTGCTTGGAAATGTGGTCCTTTGAACTGATTGTTCTTCTATCTGGTCTTCTTCCAAACCCAAAGTTGGAAACCTCAGTGCTTTCTATCAGCCTAAATACAGCGGCAATGGTTTGGATGATCCCATTTGGACTCAGTTCTGCTGTCAGCACTCGCGTCTCAAATGAATTAGGAGCAGGGCGTCCAGAAACCGCACGTTTAGCAGTGTGTGTTGTCTTAGTCATGGCCATTACTGTGGGTTTATTGGTGGGATCAGTCTTGATACTGATACGCAACTTCTGGGGCTATGCTTATAGCAATGAAACACAAGTGGTCAAATATCTAGCAACCATGATGCCAATACTTGCAACATCCAACTTCTTAGACGGTCTCCAGTGTGTTCTTTCAGGCACTGCTAGAGGATGTGGCTGGCAGAAGATTGGAGCATATATTAATCTTGGGTCGTATTATTTAGTTGGAATTCCACTGGCTATTGTATTTTCTTTTGTCATTCACATCGGTGGAAAGGGGCTCTGGCTCGGGATCATATGTGCATTGATTGTGCAAGTGTTATCACTTCTTACTGTAACCATACGCACCAACTGGGAGAAAGAGGCAAAAAAAGCTACAGAAAGAGTATATGACACAACTGTTCCCGTGGACGTAGTGTCATGA

Protein Analysis

500

Amino Acids

54.1

Weight (kDa)

8.36

Isoelectric Point (pI)

27.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015109)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G52450
fragaria_vesca FvH4_5g16890 FvH4_5g16890
malus_domestica MD06G1222800.v1.1
prunus_persica Prupe.5G227700_v2.0.a1
pyrus_communis pycom06g19860
rosa_chinensis RchiOBHm_Chr7g0179161
rosa_laevigata RLG00000005380
rosa_multiflora Rmu_sc0000888.1_g000021
rosa_roxburghii Rroxscaffold_3G00274250
rosa_rugosa Rorug06G0421700
rosa_samantha Rh7AG020600 Rh7BG020900 Rh7CG022000 Rh7DG021500
rosa_wichuraiana Rw7G001740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 771
AccII CGCG 1 cut(s) 1002
AciI CCGC 3 cut(s) 441, 950, 1038
AclWI GGATC 5 cut(s) 517, 722, 961, 1105, 1376
AcoI YGGCCR 2 cut(s) 472, 1071
AcsI RAATTY 1 cut(s) 1305
AcuI CTGAAG 2 cut(s) 536, 819
AcyI GRCGYC 1 cut(s) 1027
AfaI GTAC 2 cut(s) 197, 204
AfiI CCNNNNNNNGG 3 cut(s) 109, 771, 913
AgeI ACCGGT 1 cut(s) 290
AgsI TTSAA 6 cut(s) 50, 86, 137, 411, 702, 872
AhdI GACNNNNNGTC 1 cut(s) 1492
AleI CACNNNNGTG 1 cut(s) 1344
AluBI AGCT 9 cut(s) 36, 215, 300, 467, 609, 623, 686, 839, 1451
AluI AGCT 9 cut(s) 36, 215, 300, 467, 609, 623, 686, 839, 1451
Alw21I GWGCWC 3 cut(s) 38, 325, 611
Alw26I GTCTC 3 cut(s) 252, 1009, 1220
Alw44I GTGCAC 1 cut(s) 321
AlwI GGATC 5 cut(s) 517, 722, 961, 1105, 1376
AlwNI CAGNNNCTG 1 cut(s) 1238
Ama87I CYCGRG 1 cut(s) 1364
AoxI GGCC 4 cut(s) 167, 267, 472, 1071
ApaLI GTGCAC 1 cut(s) 321
ApeKI GCWGC 4 cut(s) 482, 491, 628, 686
ApoI RAATTY 1 cut(s) 1305
AseI ATTAAT 1 cut(s) 1278
AsiGI ACCGGT 1 cut(s) 290
AspS9I GGNCC 3 cut(s) 167, 268, 864
AsuHPI GGTGA 3 cut(s) 30, 251, 280
AsuNHI GCTAGC 1 cut(s) 160
AvaI CYCGRG 1 cut(s) 1364
AvaII GGWCC 1 cut(s) 864
BaeGI GKGCMC 1 cut(s) 325
BalI TGGCCA 2 cut(s) 474, 1073
BanII GRGCYC 3 cut(s) 38, 611, 1359
BauI CACGAG 1 cut(s) 92
BbsI GAAGAC 2 cut(s) 18, 887
Bbv12I GWGCWC 3 cut(s) 38, 325, 611
BbvI GCAGC 4 cut(s) 469, 503, 615, 673
BccI CCATC 3 cut(s) 34, 367, 838
BciVI GTATCC 1 cut(s) 322
BcoDI GTCTC 3 cut(s) 252, 1009, 1220
BfaI CTAG 3 cut(s) 161, 1169, 1242
BfmI CTRYAG 1 cut(s) 1452
BfuI GTATCC 1 cut(s) 322
BisI GCNGC 5 cut(s) 483, 492, 629, 687, 951
BlpI GCTNAGC 1 cut(s) 605
BlsI GCNGC 5 cut(s) 484, 493, 630, 688, 952
BmcAI AGTACT 1 cut(s) 197
Bme18I GGWCC 1 cut(s) 864
BmeRI GACNNNNNGTC 1 cut(s) 1492
BmeT110I CYCGRG 1 cut(s) 1364
BmgT120I GGNCC 3 cut(s) 167, 268, 864
BmrI ACTGGG 1 cut(s) 1438
BmsI GCATC 4 cut(s) 58, 469, 591, 1170
BmtI GCTAGC 1 cut(s) 164
BmuI ACTGGG 1 cut(s) 1438
BpiI GAAGAC 2 cut(s) 18, 887
BpmI CTGGAG 1 cut(s) 1202
Bpu1102I GCTNAGC 1 cut(s) 605
BsaHI GRCGYC 1 cut(s) 1027
BsaI GGTCTC 1 cut(s) 1220
BsaJI CCNNGG 4 cut(s) 103, 264, 690, 1482
BsaWI WCCGGW 1 cut(s) 290
Bsc4I CCNNNNNNNGG 3 cut(s) 109, 771, 913
Bse118I RCCGGY 1 cut(s) 290
Bse1I ACTGG 4 cut(s) 330, 1219, 1317, 1433
Bse3DI GCAATG 2 cut(s) 960, 1150
BseDI CCNNGG 4 cut(s) 103, 264, 690, 1482
BseGI GGATG 5 cut(s) 281, 633, 969, 1196, 1253
BseLI CCNNNNNNNGG 3 cut(s) 109, 771, 913
BseMI GCAATG 2 cut(s) 960, 1150
BseMII CTCAG 4 cut(s) 23, 596, 936, 994
BseNI ACTGG 4 cut(s) 330, 1219, 1317, 1433
BseSI GKGCMC 1 cut(s) 325
BseXI GCAGC 4 cut(s) 469, 503, 615, 673
BsgI GTGCAG 1 cut(s) 614
Bsh1236I CGCG 1 cut(s) 1002
BshFI GGCC 4 cut(s) 169, 269, 474, 1073
BshTI ACCGGT 1 cut(s) 290
BsiHKAI GWGCWC 3 cut(s) 38, 325, 611
BsiHKCI CYCGRG 1 cut(s) 1364
BsiSI CCGG 2 cut(s) 291, 501
BslFI GGGAC 1 cut(s) 19
BslI CCNNNNNNNGG 3 cut(s) 109, 771, 913
BsmAI GTCTC 3 cut(s) 252, 1009, 1220
BsmBI CGTCTC 1 cut(s) 1009
BsmFI GGGAC 1 cut(s) 19
BsnI GGCC 4 cut(s) 169, 269, 474, 1073
Bso31I GGTCTC 1 cut(s) 1220
BsoBI CYCGRG 1 cut(s) 1364
Bsp1286I GDGCHC 4 cut(s) 38, 325, 611, 1359
Bsp1407I TGTACA 1 cut(s) 202
Bsp143I GATC 5 cut(s) 522, 714, 966, 1097, 1368
Bsp1720I GCTNAGC 1 cut(s) 605
Bsp19I CCATGG 2 cut(s) 103, 264
BspACI CCGC 3 cut(s) 441, 950, 1038
BspANI GGCC 4 cut(s) 169, 269, 474, 1073
BspCNI CTCAG 4 cut(s) 24, 597, 935, 993
BspFNI CGCG 1 cut(s) 1002
BspHI TCATGA 1 cut(s) 1496
BspOI GCTAGC 1 cut(s) 164
BspPI GGATC 5 cut(s) 517, 722, 961, 1105, 1376
BspTNI GGTCTC 1 cut(s) 1220
BsrDI GCAATG 2 cut(s) 960, 1150
BsrFI RCCGGY 1 cut(s) 290
BsrGI TGTACA 1 cut(s) 202
BsrI ACTGG 4 cut(s) 330, 1219, 1317, 1433
BssAI RCCGGY 1 cut(s) 290
BssECI CCNNGG 4 cut(s) 103, 264, 690, 1482
BssMI GATC 5 cut(s) 522, 714, 966, 1097, 1368
BssNI GRCGYC 1 cut(s) 1027
BssSI CACGAG 1 cut(s) 92
BssT1I CCWWGG 3 cut(s) 103, 264, 690
Bst2BI CACGAG 1 cut(s) 92
Bst4CI ACNGT 7 cut(s) 42, 195, 345, 1081, 1214, 1411, 1477
Bst6I CTCTTC 1 cut(s) 757
BstACI GRCGYC 1 cut(s) 1027
BstAUI TGTACA 1 cut(s) 202
BstC8I GCNNGC 3 cut(s) 162, 302, 1256
BstDEI CTNAG 6 cut(s) 32, 605, 922, 980, 1063, 1207
BstDSI CCRYGG 3 cut(s) 103, 264, 1482
BstF5I GGATG 5 cut(s) 281, 633, 969, 1196, 1253
BstFNI CGCG 1 cut(s) 1002
BstKTI GATC 5 cut(s) 525, 717, 969, 1100, 1371
BstMAI GTCTC 3 cut(s) 252, 1009, 1220
BstMBI GATC 5 cut(s) 522, 714, 966, 1097, 1368
BstNSI RCATGY 1 cut(s) 388
BstSFI CTRYAG 1 cut(s) 1452
BstSLI GKGCMC 1 cut(s) 325
BstUI CGCG 1 cut(s) 1002
BstV1I GCAGC 4 cut(s) 469, 503, 615, 673
BstV2I GAAGAC 2 cut(s) 18, 887
BstXI CCANNNNNNTGG 1 cut(s) 1081
BsuI GTATCC 1 cut(s) 322
BsuRI GGCC 4 cut(s) 169, 269, 474, 1073
BtgI CCRYGG 3 cut(s) 103, 264, 1482
BtsCI GGATG 5 cut(s) 281, 633, 969, 1196, 1253
BtsI GCAGTG 2 cut(s) 1056, 1236
BtsIMutI CAGTG 8 cut(s) 323, 350, 560, 930, 1056, 1226, 1236, 1310
Cac8I GCNNGC 3 cut(s) 162, 302, 1256
CaiI CAGNNNCTG 1 cut(s) 1238
CciI TCATGA 1 cut(s) 1496
Cfr10I RCCGGY 1 cut(s) 290
Cfr13I GGNCC 3 cut(s) 167, 268, 864
CseI GACGC 2 cut(s) 991, 1016
Csp6I GTAC 2 cut(s) 196, 203
CspAI ACCGGT 1 cut(s) 290
CviAII CATG 7 cut(s) 104, 265, 385, 397, 1069, 1177, 1497
CviQI GTAC 2 cut(s) 196, 203
DdeI CTNAG 6 cut(s) 32, 605, 922, 980, 1063, 1207
DpnI GATC 5 cut(s) 524, 716, 968, 1099, 1370
DpnII GATC 5 cut(s) 522, 714, 966, 1097, 1368
DriI GACNNNNNGTC 1 cut(s) 1492
EaeI YGGCCR 2 cut(s) 472, 1071
Eam1104I CTCTTC 1 cut(s) 757
Eam1105I GACNNNNNGTC 1 cut(s) 1492
EarI CTCTTC 1 cut(s) 757
Ecl136II GAGCTC 2 cut(s) 36, 609
Eco130I CCWWGG 3 cut(s) 103, 264, 690
Eco24I GRGCYC 3 cut(s) 38, 611, 1359
Eco31I GGTCTC 1 cut(s) 1220
Eco47I GGWCC 1 cut(s) 864
Eco53kI GAGCTC 2 cut(s) 36, 609
Eco57I CTGAAG 2 cut(s) 536, 819
Eco88I CYCGRG 1 cut(s) 1364
EcoICRI GAGCTC 2 cut(s) 36, 609
EcoO109I RGGNCCY 1 cut(s) 167
EcoRI GAATTC 1 cut(s) 1305
EcoT14I CCWWGG 3 cut(s) 103, 264, 690
EcoT38I GRGCYC 3 cut(s) 38, 611, 1359
ErhI CCWWGG 3 cut(s) 103, 264, 690
Esp3I CGTCTC 1 cut(s) 1009
FaeI CATG 7 cut(s) 107, 268, 388, 400, 1072, 1180, 1500
FaqI GGGAC 1 cut(s) 19
FatI CATG 7 cut(s) 103, 264, 384, 396, 1068, 1176, 1496
FauNDI CATATG 3 cut(s) 369, 541, 1373
Fnu4HI GCNGC 5 cut(s) 483, 492, 629, 687, 951
FokI GGATG 5 cut(s) 268, 620, 976, 1183, 1260
FriOI GRGCYC 3 cut(s) 38, 611, 1359
Fsp4HI GCNGC 5 cut(s) 483, 492, 629, 687, 951
FspBI CTAG 3 cut(s) 161, 1169, 1242
GluI GCNGC 5 cut(s) 483, 492, 629, 687, 951
GsuI CTGGAG 1 cut(s) 1202
HaeIII GGCC 4 cut(s) 169, 269, 474, 1073
HapII CCGG 2 cut(s) 291, 501
HgaI GACGC 2 cut(s) 991, 1016
Hin1I GRCGYC 1 cut(s) 1027
Hin1II CATG 7 cut(s) 107, 268, 388, 400, 1072, 1180, 1500
HinfI GANTC 6 cut(s) 46, 184, 453, 649, 822, 978
HpaII CCGG 2 cut(s) 291, 501
HphI GGTGA 3 cut(s) 30, 251, 280
Hpy166II GTNNAC 4 cut(s) 323, 341, 660, 1486
Hpy188I TCNGA 1 cut(s) 33
Hpy188III TCNNGA 7 cut(s) 520, 666, 784, 1031, 1105, 1366, 1497
Hpy8I GTNNAC 4 cut(s) 323, 341, 660, 1486
HpyAV CCTTC 4 cut(s) 102, 537, 781, 843
HpyCH4III ACNGT 7 cut(s) 42, 195, 345, 1081, 1214, 1411, 1477
HpyCH4IV ACGT 2 cut(s) 1042, 1488
HpyF3I CTNAG 6 cut(s) 32, 605, 922, 980, 1063, 1207
HpySE526I ACGT 2 cut(s) 1042, 1488
Hsp92I GRCGYC 1 cut(s) 1027
Hsp92II CATG 7 cut(s) 107, 268, 388, 400, 1072, 1180, 1500
Kzo9I GATC 5 cut(s) 522, 714, 966, 1097, 1368
LmnI GCTCC 3 cut(s) 683, 1019, 1268
Lsp1109I GCAGC 4 cut(s) 469, 503, 615, 673
LweI GCATC 4 cut(s) 58, 469, 591, 1170
MaeI CTAG 3 cut(s) 161, 1169, 1242
MaeII ACGT 2 cut(s) 1042, 1488
MaeIII GTNAC 3 cut(s) 189, 286, 1411
MalI GATC 5 cut(s) 524, 716, 968, 1099, 1370
MboI GATC 5 cut(s) 522, 714, 966, 1097, 1368
MfeI CAATTG 1 cut(s) 411
MhlI GDGCHC 4 cut(s) 38, 325, 611, 1359
MlsI TGGCCA 2 cut(s) 474, 1073
MluCI AATT 6 cut(s) 129, 242, 411, 506, 1013, 1305
MluNI TGGCCA 2 cut(s) 474, 1073
MlyI GAGTC 3 cut(s) 193, 816, 972
MmeI TCCRAC 4 cut(s) 626, 894, 1224, 1282
MnlI CCTC 8 cut(s) 88, 180, 558, 648, 784, 931, 1238, 1432
Mox20I TGGCCA 2 cut(s) 474, 1073
MscI TGGCCA 2 cut(s) 474, 1073
MseI TTAA 3 cut(s) 75, 117, 1278
MslI CAYNNNNRTG 4 cut(s) 237, 383, 1079, 1344
Msp20I TGGCCA 2 cut(s) 474, 1073
MspA1I CMGCKG 2 cut(s) 839, 950
MspI CCGG 2 cut(s) 291, 501
MunI CAATTG 1 cut(s) 411
MvnI CGCG 1 cut(s) 1002
NcoI CCATGG 2 cut(s) 103, 264
NdeI CATATG 3 cut(s) 369, 541, 1373
NdeII GATC 5 cut(s) 522, 714, 966, 1097, 1368
NheI GCTAGC 1 cut(s) 160
NlaIII CATG 7 cut(s) 107, 268, 388, 400, 1072, 1180, 1500
NmuCI GTSAC 1 cut(s) 286
NspI RCATGY 1 cut(s) 388
OliI CACNNNNGTG 1 cut(s) 1344
PagI TCATGA 1 cut(s) 1496
PfeI GAWTC 3 cut(s) 46, 453, 649
PflMI CCANNNNNTGG 1 cut(s) 771
PinAI ACCGGT 1 cut(s) 290
PkrI GCNGC 5 cut(s) 484, 493, 630, 688, 952
PleI GAGTC 3 cut(s) 192, 816, 972
PpsI GAGTC 3 cut(s) 192, 816, 972
PshBI ATTAAT 1 cut(s) 1278
Psp124BI GAGCTC 2 cut(s) 38, 611
PspPI GGNCC 3 cut(s) 167, 268, 864
PstNI CAGNNNCTG 1 cut(s) 1238
PvuII CAGCTG 1 cut(s) 839
RsaI GTAC 2 cut(s) 197, 204
RsaNI GTAC 2 cut(s) 196, 203
RseI CAYNNNNRTG 4 cut(s) 237, 383, 1079, 1344
SacI GAGCTC 2 cut(s) 38, 611
SaqAI TTAA 3 cut(s) 75, 117, 1278
SatI GCNGC 5 cut(s) 483, 492, 629, 687, 951
Sau3AI GATC 5 cut(s) 522, 714, 966, 1097, 1368
Sau96I GGNCC 3 cut(s) 167, 268, 864
ScaI AGTACT 1 cut(s) 197
SchI GAGTC 3 cut(s) 193, 816, 972
SduI GDGCHC 4 cut(s) 38, 325, 611, 1359
SfaNI GCATC 4 cut(s) 58, 469, 591, 1170
SfcI CTRYAG 1 cut(s) 1452
SinI GGWCC 1 cut(s) 864
SmiMI CAYNNNNRTG 4 cut(s) 237, 383, 1079, 1344
Sse9I AATT 6 cut(s) 129, 242, 411, 506, 1013, 1305
SsiI CCGC 3 cut(s) 441, 950, 1038
SspMI CTAG 3 cut(s) 161, 1169, 1242
SstI GAGCTC 2 cut(s) 38, 611
StyI CCWWGG 3 cut(s) 103, 264, 690
TaaI ACNGT 7 cut(s) 42, 195, 345, 1081, 1214, 1411, 1477
TaiI ACGT 2 cut(s) 1045, 1491
TaqI TCGA 1 cut(s) 785
TasI AATT 6 cut(s) 129, 242, 411, 506, 1013, 1305
TatI WGTACW 2 cut(s) 195, 202
TauI GCSGC 1 cut(s) 953
TfiI GAWTC 3 cut(s) 46, 453, 649
Tru1I TTAA 3 cut(s) 75, 117, 1278
Tru9I TTAA 3 cut(s) 75, 117, 1278
TscAI CASTG 8 cut(s) 330, 350, 560, 930, 1056, 1226, 1243, 1317
TseFI GTSAC 1 cut(s) 286
TseI GCWGC 4 cut(s) 482, 491, 628, 686
Tsp45I GTSAC 1 cut(s) 286
TspDTI ATGAA 4 cut(s) 270, 744, 1026, 1161
TspGWI ACGGA 1 cut(s) 274
TspRI CASTG 8 cut(s) 330, 350, 560, 930, 1056, 1226, 1243, 1317
Van91I CCANNNNNTGG 1 cut(s) 771
VneI GTGCAC 1 cut(s) 321
VpaK11BI GGWCC 1 cut(s) 864
VspI ATTAAT 1 cut(s) 1278
XapI RAATTY 1 cut(s) 1305
XceI RCATGY 1 cut(s) 388
XspI CTAG 3 cut(s) 161, 1169, 1242
ZrmI AGTACT 1 cut(s) 197
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.