Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD06G1235000.v1.1 MD06G1235200.v1.1 |
| rosa_multiflora | Rmu_co8090820.1_g000001 Rmu_sc0000016.1_g000004 Rmu_sc0000112.1_g000027 Rmu_sc0009988.1_g000017 Rmu_sc0019843.1_g000001 Rmu_sc0040871.1_g000001 Rmu_ssc0000126.1_g000005 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 474, 501 |
| AccB1I | GGYRCC | 1 cut(s) | 923 |
| AccI | GTMKAC | 2 cut(s) | 596, 715 |
| AccII | CGCG | 3 cut(s) | 513, 1166, 1168 |
| AccIII | TCCGGA | 1 cut(s) | 991 |
| AciI | CCGC | 5 cut(s) | 17, 62, 203, 511, 1164 |
| AclWI | GGATC | 8 cut(s) | 72, 96, 255, 290, 533, 794, 1050, 1063 |
| AcoI | YGGCCR | 1 cut(s) | 910 |
| AcsI | RAATTY | 2 cut(s) | 587, 1030 |
| AcuI | CTGAAG | 1 cut(s) | 1273 |
| AcyI | GRCGYC | 2 cut(s) | 712, 924 |
| AfaI | GTAC | 5 cut(s) | 27, 98, 167, 458, 1240 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 407, 565, 809, 919, 1096 |
| AgeI | ACCGGT | 1 cut(s) | 863 |
| AgsI | TTSAA | 6 cut(s) | 241, 521, 587, 731, 793, 886 |
| AhlI | ACTAGT | 1 cut(s) | 766 |
| AjiI | CACGTC | 1 cut(s) | 1102 |
| AluBI | AGCT | 6 cut(s) | 224, 308, 745, 749, 946, 1249 |
| AluI | AGCT | 6 cut(s) | 224, 308, 745, 749, 946, 1249 |
| Alw21I | GWGCWC | 1 cut(s) | 265 |
| Alw26I | GTCTC | 1 cut(s) | 1121 |
| AlwI | GGATC | 8 cut(s) | 72, 96, 255, 290, 533, 794, 1050, 1063 |
| Ama87I | CYCGRG | 1 cut(s) | 448 |
| Aor13HI | TCCGGA | 1 cut(s) | 991 |
| AoxI | GGCC | 3 cut(s) | 139, 340, 910 |
| ApeKI | GCWGC | 2 cut(s) | 894, 946 |
| ApoI | RAATTY | 2 cut(s) | 587, 1030 |
| AsiGI | ACCGGT | 1 cut(s) | 863 |
| AspLEI | GCGC | 2 cut(s) | 926, 1168 |
| AspS9I | GGNCC | 4 cut(s) | 75, 140, 508, 933 |
| AsuC2I | CCSGG | 1 cut(s) | 921 |
| AsuHPI | GGTGA | 4 cut(s) | 186, 217, 242, 809 |
| AsuII | TTCGAA | 1 cut(s) | 532 |
| AsuNHI | GCTAGC | 1 cut(s) | 745 |
| AvaI | CYCGRG | 1 cut(s) | 448 |
| AvaII | GGWCC | 3 cut(s) | 75, 508, 933 |
| AxyI | CCTNAGG | 1 cut(s) | 284 |
| BalI | TGGCCA | 1 cut(s) | 912 |
| BamHI | GGATCC | 1 cut(s) | 1055 |
| BanI | GGYRCC | 1 cut(s) | 923 |
| BbsI | GAAGAC | 1 cut(s) | 14 |
| Bbv12I | GWGCWC | 1 cut(s) | 265 |
| BbvI | GCAGC | 2 cut(s) | 906, 933 |
| BccI | CCATC | 2 cut(s) | 634, 1115 |
| BceAI | ACGGC | 1 cut(s) | 1139 |
| BciVI | GTATCC | 1 cut(s) | 164 |
| BcnI | CCSGG | 1 cut(s) | 921 |
| BcoDI | GTCTC | 1 cut(s) | 1121 |
| BcuI | ACTAGT | 1 cut(s) | 766 |
| BfaI | CTAG | 3 cut(s) | 68, 746, 767 |
| BfmI | CTRYAG | 3 cut(s) | 847, 947, 1250 |
| BfoI | RGCGCY | 1 cut(s) | 927 |
| BfuI | GTATCC | 1 cut(s) | 164 |
| BglII | AGATCT | 1 cut(s) | 350 |
| BisI | GCNGC | 3 cut(s) | 895, 947, 1164 |
| BlsI | GCNGC | 3 cut(s) | 896, 948, 1165 |
| BmcAI | AGTACT | 1 cut(s) | 1240 |
| Bme1390I | CCNGG | 1 cut(s) | 921 |
| Bme18I | GGWCC | 3 cut(s) | 75, 508, 933 |
| BmeT110I | CYCGRG | 1 cut(s) | 448 |
| BmgBI | CACGTC | 1 cut(s) | 1102 |
| BmgT120I | GGNCC | 4 cut(s) | 75, 140, 508, 933 |
| BmiI | GGNNCC | 3 cut(s) | 925, 1006, 1057 |
| BmrFI | CCNGG | 1 cut(s) | 921 |
| BmrI | ACTGGG | 1 cut(s) | 150 |
| BmsI | GCATC | 3 cut(s) | 42, 190, 673 |
| BmtI | GCTAGC | 1 cut(s) | 749 |
| BmuI | ACTGGG | 1 cut(s) | 150 |
| BpiI | GAAGAC | 1 cut(s) | 14 |
| Bpu14I | TTCGAA | 1 cut(s) | 532 |
| BpuEI | CTTGAG | 1 cut(s) | 296 |
| BpuMI | CCSGG | 1 cut(s) | 921 |
| BsaHI | GRCGYC | 2 cut(s) | 712, 924 |
| BsaJI | CCNNGG | 3 cut(s) | 12, 936, 1000 |
| BsaWI | WCCGGW | 3 cut(s) | 56, 863, 991 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 99, 129, 607, 637 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 407, 565, 809, 919, 1096 |
| Bse118I | RCCGGY | 2 cut(s) | 342, 863 |
| Bse1I | ACTGG | 6 cut(s) | 156, 555, 821, 842, 913, 1057 |
| Bse21I | CCTNAGG | 1 cut(s) | 284 |
| Bse3DI | GCAATG | 1 cut(s) | 28 |
| BseAI | TCCGGA | 1 cut(s) | 991 |
| BseDI | CCNNGG | 3 cut(s) | 12, 936, 1000 |
| BseGI | GGATG | 3 cut(s) | 645, 662, 946 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 407, 565, 809, 919, 1096 |
| BseMI | GCAATG | 1 cut(s) | 28 |
| BseMII | CTCAG | 2 cut(s) | 668, 904 |
| BseNI | ACTGG | 6 cut(s) | 156, 555, 821, 842, 913, 1057 |
| BseRI | GAGGAG | 3 cut(s) | 663, 1176, 1191 |
| BseXI | GCAGC | 2 cut(s) | 906, 933 |
| Bsh1236I | CGCG | 3 cut(s) | 513, 1166, 1168 |
| Bsh1285I | CGRYCG | 1 cut(s) | 868 |
| BshFI | GGCC | 3 cut(s) | 141, 342, 912 |
| BshNI | GGYRCC | 1 cut(s) | 923 |
| BshTI | ACCGGT | 1 cut(s) | 863 |
| BsiEI | CGRYCG | 1 cut(s) | 868 |
| BsiHKAI | GWGCWC | 1 cut(s) | 265 |
| BsiHKCI | CYCGRG | 1 cut(s) | 448 |
| BsiSI | CCGG | 5 cut(s) | 57, 343, 864, 920, 992 |
| BsiWI | CGTACG | 1 cut(s) | 165 |
| BslFI | GGGAC | 2 cut(s) | 101, 848 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 407, 565, 809, 919, 1096 |
| BsmAI | GTCTC | 1 cut(s) | 1121 |
| BsmFI | GGGAC | 2 cut(s) | 101, 848 |
| BsmI | GAATGC | 2 cut(s) | 1131, 1238 |
| BsnI | GGCC | 3 cut(s) | 141, 342, 912 |
| BsoBI | CYCGRG | 1 cut(s) | 448 |
| Bsp119I | TTCGAA | 1 cut(s) | 532 |
| Bsp1286I | GDGCHC | 1 cut(s) | 265 |
| Bsp13I | TCCGGA | 1 cut(s) | 991 |
| Bsp19I | CCATGG | 2 cut(s) | 12, 936 |
| BspACI | CCGC | 5 cut(s) | 17, 62, 203, 511, 1164 |
| BspANI | GGCC | 3 cut(s) | 141, 342, 912 |
| BspCNI | CTCAG | 2 cut(s) | 667, 903 |
| BspEI | TCCGGA | 1 cut(s) | 991 |
| BspFNI | CGCG | 3 cut(s) | 513, 1166, 1168 |
| BspLI | GGNNCC | 3 cut(s) | 925, 1006, 1057 |
| BspMAI | CTGCAG | 1 cut(s) | 951 |
| BspOI | GCTAGC | 1 cut(s) | 749 |
| BspPI | GGATC | 8 cut(s) | 72, 96, 255, 290, 533, 794, 1050, 1063 |
| BspT104I | TTCGAA | 1 cut(s) | 532 |
| BspT107I | GGYRCC | 1 cut(s) | 923 |
| BsrDI | GCAATG | 1 cut(s) | 28 |
| BsrFI | RCCGGY | 2 cut(s) | 342, 863 |
| BsrI | ACTGG | 6 cut(s) | 156, 555, 821, 842, 913, 1057 |
| BssAI | RCCGGY | 2 cut(s) | 342, 863 |
| BssECI | CCNNGG | 3 cut(s) | 12, 936, 1000 |
| BssNAI | GTATAC | 1 cut(s) | 597 |
| BssNI | GRCGYC | 2 cut(s) | 712, 924 |
| BssT1I | CCWWGG | 3 cut(s) | 12, 936, 1000 |
| Bst1107I | GTATAC | 1 cut(s) | 597 |
| Bst4CI | ACNGT | 3 cut(s) | 601, 812, 848 |
| BstACI | GRCGYC | 2 cut(s) | 712, 924 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1233 |
| BstBI | TTCGAA | 1 cut(s) | 532 |
| BstC8I | GCNNGC | 2 cut(s) | 310, 747 |
| BstDEI | CTNAG | 3 cut(s) | 284, 654, 890 |
| BstDSI | CCRYGG | 2 cut(s) | 12, 936 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 563 |
| BstF5I | GGATG | 3 cut(s) | 645, 662, 946 |
| BstFNI | CGCG | 3 cut(s) | 513, 1166, 1168 |
| BstH2I | RGCGCY | 1 cut(s) | 927 |
| BstHHI | GCGC | 2 cut(s) | 926, 1168 |
| BstMAI | GTCTC | 1 cut(s) | 1121 |
| BstMCI | CGRYCG | 1 cut(s) | 868 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 900, 909, 1160, 1233 |
| BstNSI | RCATGY | 1 cut(s) | 979 |
| BstSCI | CCNGG | 1 cut(s) | 919 |
| BstSFI | CTRYAG | 3 cut(s) | 847, 947, 1250 |
| BstUI | CGCG | 3 cut(s) | 513, 1166, 1168 |
| BstV1I | GCAGC | 2 cut(s) | 906, 933 |
| BstV2I | GAAGAC | 1 cut(s) | 14 |
| BstX2I | RGATCY | 5 cut(s) | 64, 295, 350, 538, 1055 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 19 |
| BstYI | RGATCY | 5 cut(s) | 64, 295, 350, 538, 1055 |
| BstZ17I | GTATAC | 1 cut(s) | 597 |
| Bsu36I | CCTNAGG | 1 cut(s) | 284 |
| BsuI | GTATCC | 1 cut(s) | 164 |
| BsuRI | GGCC | 3 cut(s) | 141, 342, 912 |
| BtgI | CCRYGG | 2 cut(s) | 12, 936 |
| BtgZI | GCGATG | 1 cut(s) | 22 |
| BtrI | CACGTC | 1 cut(s) | 1102 |
| BtsCI | GGATG | 3 cut(s) | 645, 662, 946 |
| BtsIMutI | CAGTG | 4 cut(s) | 163, 265, 548, 1050 |
| Cac8I | GCNNGC | 2 cut(s) | 310, 747 |
| CfoI | GCGC | 2 cut(s) | 926, 1168 |
| Cfr10I | RCCGGY | 2 cut(s) | 342, 863 |
| Cfr13I | GGNCC | 4 cut(s) | 75, 140, 508, 933 |
| CseI | GACGC | 2 cut(s) | 701, 909 |
| Csp6I | GTAC | 5 cut(s) | 26, 97, 166, 457, 1239 |
| CspAI | ACCGGT | 1 cut(s) | 863 |
| CviAII | CATG | 4 cut(s) | 13, 592, 937, 976 |
| CviQI | GTAC | 5 cut(s) | 26, 97, 166, 457, 1239 |
| DdeI | CTNAG | 3 cut(s) | 284, 654, 890 |
| DinI | GGCGCC | 1 cut(s) | 925 |
| DraI | TTTAAA | 1 cut(s) | 1077 |
| EaeI | YGGCCR | 1 cut(s) | 910 |
| Eco130I | CCWWGG | 3 cut(s) | 12, 936, 1000 |
| Eco47I | GGWCC | 3 cut(s) | 75, 508, 933 |
| Eco57I | CTGAAG | 1 cut(s) | 1273 |
| Eco81I | CCTNAGG | 1 cut(s) | 284 |
| Eco88I | CYCGRG | 1 cut(s) | 448 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 563 |
| EcoRI | GAATTC | 1 cut(s) | 587 |
| EcoT14I | CCWWGG | 3 cut(s) | 12, 936, 1000 |
| EgeI | GGCGCC | 1 cut(s) | 925 |
| EheI | GGCGCC | 1 cut(s) | 925 |
| ErhI | CCWWGG | 3 cut(s) | 12, 936, 1000 |
| FaeI | CATG | 4 cut(s) | 16, 595, 940, 979 |
| FaqI | GGGAC | 2 cut(s) | 101, 848 |
| FatI | CATG | 4 cut(s) | 12, 591, 936, 975 |
| FblI | GTMKAC | 2 cut(s) | 596, 715 |
| Fnu4HI | GCNGC | 3 cut(s) | 895, 947, 1164 |
| FokI | GGATG | 3 cut(s) | 649, 652, 953 |
| Fsp4HI | GCNGC | 3 cut(s) | 895, 947, 1164 |
| FspBI | CTAG | 3 cut(s) | 68, 746, 767 |
| GlaI | GCGC | 2 cut(s) | 925, 1167 |
| GluI | GCNGC | 3 cut(s) | 895, 947, 1164 |
| HaeII | RGCGCY | 1 cut(s) | 927 |
| HaeIII | GGCC | 3 cut(s) | 141, 342, 912 |
| HapII | CCGG | 5 cut(s) | 57, 343, 864, 920, 992 |
| HgaI | GACGC | 2 cut(s) | 701, 909 |
| HhaI | GCGC | 2 cut(s) | 926, 1168 |
| Hin1I | GRCGYC | 2 cut(s) | 712, 924 |
| Hin1II | CATG | 4 cut(s) | 16, 595, 940, 979 |
| Hin6I | GCGC | 2 cut(s) | 924, 1166 |
| HinP1I | GCGC | 2 cut(s) | 924, 1166 |
| HincII | GTYRAC | 2 cut(s) | 361, 427 |
| HindII | GTYRAC | 2 cut(s) | 361, 427 |
| HinfI | GANTC | 2 cut(s) | 886, 1047 |
| HpaII | CCGG | 5 cut(s) | 57, 343, 864, 920, 992 |
| HphI | GGTGA | 4 cut(s) | 186, 217, 242, 809 |
| Hpy166II | GTNNAC | 5 cut(s) | 361, 427, 597, 716, 824 |
| Hpy188I | TCNGA | 5 cut(s) | 79, 88, 350, 565, 808 |
| Hpy188III | TCNNGA | 5 cut(s) | 299, 379, 992, 1118, 1221 |
| Hpy8I | GTNNAC | 5 cut(s) | 361, 427, 597, 716, 824 |
| Hpy99I | CGWCG | 3 cut(s) | 83, 683, 903 |
| HpyCH4III | ACNGT | 3 cut(s) | 601, 812, 848 |
| HpyCH4IV | ACGT | 3 cut(s) | 826, 1101, 1142 |
| HpyCH4V | TGCA | 7 cut(s) | 33, 312, 548, 772, 949, 975, 1236 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 900, 909, 1160, 1233 |
| HpyF3I | CTNAG | 3 cut(s) | 284, 654, 890 |
| HpySE526I | ACGT | 3 cut(s) | 826, 1101, 1142 |
| Hsp92I | GRCGYC | 2 cut(s) | 712, 924 |
| Hsp92II | CATG | 4 cut(s) | 16, 595, 940, 979 |
| HspAI | GCGC | 2 cut(s) | 924, 1166 |
| KasI | GGCGCC | 1 cut(s) | 923 |
| Kpn2I | TCCGGA | 1 cut(s) | 991 |
| LmnI | GCTCC | 2 cut(s) | 268, 1010 |
| Lsp1109I | GCAGC | 2 cut(s) | 906, 933 |
| LweI | GCATC | 3 cut(s) | 42, 190, 673 |
| MaeI | CTAG | 3 cut(s) | 68, 746, 767 |
| MaeII | ACGT | 3 cut(s) | 826, 1101, 1142 |
| MaeIII | GTNAC | 5 cut(s) | 205, 812, 827, 874, 1292 |
| MboII | GAAGA | 4 cut(s) | 19, 344, 848, 1279 |
| MflI | RGATCY | 5 cut(s) | 64, 295, 350, 538, 1055 |
| MhlI | GDGCHC | 1 cut(s) | 265 |
| MlsI | TGGCCA | 1 cut(s) | 912 |
| MluCI | AATT | 7 cut(s) | 48, 587, 692, 914, 954, 1030, 1111 |
| MluNI | TGGCCA | 1 cut(s) | 912 |
| Mly113I | GGCGCC | 1 cut(s) | 924 |
| MlyI | GAGTC | 1 cut(s) | 1041 |
| MmeI | TCCRAC | 2 cut(s) | 66, 102 |
| Mox20I | TGGCCA | 1 cut(s) | 912 |
| MroI | TCCGGA | 1 cut(s) | 991 |
| MscI | TGGCCA | 1 cut(s) | 912 |
| MseI | TTAA | 1 cut(s) | 1076 |
| MslI | CAYNNNNRTG | 1 cut(s) | 17 |
| Msp20I | TGGCCA | 1 cut(s) | 912 |
| MspI | CCGG | 5 cut(s) | 57, 343, 864, 920, 992 |
| MspR9I | CCNGG | 1 cut(s) | 921 |
| Mva1269I | GAATGC | 2 cut(s) | 1131, 1238 |
| MvnI | CGCG | 3 cut(s) | 513, 1166, 1168 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 900, 909, 1160, 1233 |
| NarI | GGCGCC | 1 cut(s) | 924 |
| NciI | CCSGG | 1 cut(s) | 921 |
| NcoI | CCATGG | 2 cut(s) | 12, 936 |
| NheI | GCTAGC | 1 cut(s) | 745 |
| NlaIII | CATG | 4 cut(s) | 16, 595, 940, 979 |
| NlaIV | GGNNCC | 3 cut(s) | 925, 1006, 1057 |
| NmeAIII | GCCGAG | 2 cut(s) | 688, 1160 |
| NmuCI | GTSAC | 1 cut(s) | 205 |
| NspI | RCATGY | 1 cut(s) | 979 |
| NspV | TTCGAA | 1 cut(s) | 532 |
| PctI | GAATGC | 2 cut(s) | 1131, 1238 |
| PfeI | GAWTC | 1 cut(s) | 886 |
| Pfl23II | CGTACG | 1 cut(s) | 165 |
| PinAI | ACCGGT | 1 cut(s) | 863 |
| PkrI | GCNGC | 3 cut(s) | 896, 948, 1165 |
| PleI | GAGTC | 1 cut(s) | 1041 |
| PluTI | GGCGCC | 1 cut(s) | 927 |
| PpsI | GAGTC | 1 cut(s) | 1041 |
| PsiI | TTATAA | 2 cut(s) | 474, 501 |
| PspLI | CGTACG | 1 cut(s) | 165 |
| PspN4I | GGNNCC | 3 cut(s) | 925, 1006, 1057 |
| PspPI | GGNCC | 4 cut(s) | 75, 140, 508, 933 |
| PstI | CTGCAG | 1 cut(s) | 951 |
| PsuI | RGATCY | 5 cut(s) | 64, 295, 350, 538, 1055 |
| RsaI | GTAC | 5 cut(s) | 27, 98, 167, 458, 1240 |
| RsaNI | GTAC | 5 cut(s) | 26, 97, 166, 457, 1239 |
| RseI | CAYNNNNRTG | 1 cut(s) | 17 |
| SaqAI | TTAA | 1 cut(s) | 1076 |
| SatI | GCNGC | 3 cut(s) | 895, 947, 1164 |
| Sau96I | GGNCC | 4 cut(s) | 75, 140, 508, 933 |
| ScaI | AGTACT | 1 cut(s) | 1240 |
| SchI | GAGTC | 1 cut(s) | 1041 |
| ScrFI | CCNGG | 1 cut(s) | 921 |
| SduI | GDGCHC | 1 cut(s) | 265 |
| SfaNI | GCATC | 3 cut(s) | 42, 190, 673 |
| SfcI | CTRYAG | 3 cut(s) | 847, 947, 1250 |
| SfoI | GGCGCC | 1 cut(s) | 925 |
| SfuI | TTCGAA | 1 cut(s) | 532 |
| SinI | GGWCC | 3 cut(s) | 75, 508, 933 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 17 |
| SmlI | CTYRAG | 1 cut(s) | 275 |
| SmoI | CTYRAG | 1 cut(s) | 275 |
| SpeI | ACTAGT | 1 cut(s) | 766 |
| Sse9I | AATT | 7 cut(s) | 48, 587, 692, 914, 954, 1030, 1111 |
| SsiI | CCGC | 5 cut(s) | 17, 62, 203, 511, 1164 |
| SspDI | GGCGCC | 1 cut(s) | 923 |
| SspMI | CTAG | 3 cut(s) | 68, 746, 767 |
| StyD4I | CCNGG | 1 cut(s) | 919 |
| StyI | CCWWGG | 3 cut(s) | 12, 936, 1000 |
| TaaI | ACNGT | 3 cut(s) | 601, 812, 848 |
| TaiI | ACGT | 3 cut(s) | 829, 1104, 1145 |
| TaqI | TCGA | 4 cut(s) | 532, 630, 681, 1119 |
| TasI | AATT | 7 cut(s) | 48, 587, 692, 914, 954, 1030, 1111 |
| TatI | WGTACW | 3 cut(s) | 25, 456, 1238 |
| TauI | GCSGC | 1 cut(s) | 1166 |
| TfiI | GAWTC | 1 cut(s) | 886 |
| Tru1I | TTAA | 1 cut(s) | 1076 |
| Tru9I | TTAA | 1 cut(s) | 1076 |
| TscAI | CASTG | 4 cut(s) | 163, 265, 555, 1057 |
| TseFI | GTSAC | 1 cut(s) | 205 |
| TseI | GCWGC | 2 cut(s) | 894, 946 |
| Tsp45I | GTSAC | 1 cut(s) | 205 |
| TspDTI | ATGAA | 4 cut(s) | 403, 473, 580, 705 |
| TspGWI | ACGGA | 1 cut(s) | 183 |
| TspRI | CASTG | 4 cut(s) | 163, 265, 555, 1057 |
| VpaK11BI | GGWCC | 3 cut(s) | 75, 508, 933 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 563 |
| XapI | RAATTY | 2 cut(s) | 587, 1030 |
| XceI | RCATGY | 1 cut(s) | 979 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 934 |
| XmiI | GTMKAC | 2 cut(s) | 596, 715 |
| XspI | CTAG | 3 cut(s) | 68, 746, 767 |
| ZrmI | AGTACT | 1 cut(s) | 1240 |