Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0014800

Physical Location & Seq

Genomic Coordinates Forward (+)

22396622 .. 22397634

Gene Structure 1013 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1154200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 918 bp

ATGGACATAGATACTGACTACAAGCAGCTATCTATAAGCACATGTACAGGAAGCAACAATGGGAGTCCACAGGTTCTGGAATTTCAAAGGACACATAAGAACAACGAGTTCAGGTTGAGCGGGATAAAAAATGATGACGATTCAGTATCATTGACTTTGCGTATAGCTGATGCATGTGGTAAGGTGAGGAATATACATTTTCTCTTTTACATTGCTAGTGATACTGCAGCGTCTGTGGCGAGGGAGATGGTTGAACAACTGGAATTAGCTGATCATGATGTGGCTTTCATTGCTGAGTTTATCGATTACTTGATAAGGAAACTTCTACCTGGTTGGAAGCCCTCATCTGATTATTCCTCAAGTGGTCCAGCGAGTCTTTGTGGCGGATCCTTAGTCCGTAAAAATGGAAAACCATCATTGTCAAGCCTGTGGGGTTCGGTGCTATTTGGTGCTCCTGATGGTTTGATGGTAGAGCAAGATGGTAGCTCCTGTGATAACCCTGATACCATCAATTTTAATGGTGGAATTACCTCTTACCAAAGCTTTGCTGATGAATCTGTTAATTGCAATACTTCTGAGCTAGAGCCAAGGTATTCATATTTCGATGACCGCAAGTTACAGAGCAATTATGCTAGCAATGAAGGAGGAGGCTTCCCAGTGAATGGGATCATAAAGAAGTTGCAGTTTCCGTTGCATGGGCACGATTTATCAAAAGATATGAGCTTGACAAGCAGCTGTTATTCTCCATCTTTGGTAGATTCAAAAGATATGAATCTGGATGCCGATTCAAAGTTGGAACTCGAAATGATTGAGTCACAGTACCAGCGGTGGTTCCAGGAACTTTCAAGGATGAGGGAGAAAGCATTGGAAATGACCAGAAAGAGATGGATAGAAAAGAAGAAAGTGGCTGTTGGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OSR1_C Pkinase

Protein Analysis

306

Amino Acids

34.0

Weight (kDa)

5.08

Isoelectric Point (pI)

45.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014800)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g17050 FvH4_7g17050
malus_domestica	MD01G1085200.v1.1 MD07G1154200.v1.1
prunus_persica	Prupe.2G192800_v2.0.a1
pyrus_communis	pycom07g15170
rosa_chinensis	RchiOBHm_Chr1g0360461
rosa_laevigata	RLG00000027806
rosa_multiflora	Rmu_ssc0000337.1_g000001
rosa_roxburghii	Rroxscaffold_4G00296090
rosa_rugosa	Rorug01G0277900 Rorug01G0278000
rosa_samantha	Rh1AG291100 Rh1BG256100 Rh1CG273800 Rh1DG285900
rosa_wichuraiana	Rw1G025780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	662
AccBSI	CCGCTC	1 cut(s)	120
AciI	CCGC	4 cut(s)	120, 384, 610, 826
AclWI	GGATC	3 cut(s)	381, 394, 674
AcsI	RAATTY	1 cut(s)	80
AfaI	GTAC	2 cut(s)	46, 821
AfiI	CCNNNNNNNGG	2 cut(s)	662, 695
AflIII	ACRYGT	1 cut(s)	41
AgsI	TTSAA	5 cut(s)	86, 254, 762, 789, 846
AjnI	CCWGG	2 cut(s)	328, 834
AluBI	AGCT	8 cut(s)	28, 167, 269, 486, 543, 580, 723, 735
AluI	AGCT	8 cut(s)	28, 167, 269, 486, 543, 580, 723, 735
Alw21I	GWGCWC	1 cut(s)	454
AlwI	GGATC	3 cut(s)	381, 394, 674
AlwNI	CAGNNNCTG	2 cut(s)	76, 233
ApeKI	GCWGC	3 cut(s)	25, 227, 732
ApoI	RAATTY	1 cut(s)	80
AspS9I	GGNCC	1 cut(s)	365
AsuHPI	GGTGA	1 cut(s)	196
AsuNHI	GCTAGC	1 cut(s)	632
AvaII	GGWCC	1 cut(s)	365
BaeGI	GKGCMC	1 cut(s)	702
BamHI	GGATCC	1 cut(s)	386
Bbv12I	GWGCWC	1 cut(s)	454
BbvI	GCAGC	3 cut(s)	37, 239, 744
BccI	CCATC	8 cut(s)	241, 421, 452, 460, 473, 515, 754, 879
BciT130I	CCWGG	2 cut(s)	330, 836
BclI	TGATCA	1 cut(s)	271
BfaI	CTAG	3 cut(s)	216, 581, 633
BfmI	CTRYAG	1 cut(s)	225
BisI	GCNGC	3 cut(s)	26, 228, 733
BlsI	GCNGC	3 cut(s)	27, 229, 734
Bme1390I	CCNGG	2 cut(s)	330, 836
Bme18I	GGWCC	1 cut(s)	365
BmgT120I	GGNCC	1 cut(s)	365
BmiI	GGNNCC	2 cut(s)	388, 833
BmrFI	CCNGG	2 cut(s)	330, 836
BmrI	ACTGGG	1 cut(s)	650
BmsI	GCATC	2 cut(s)	160, 769
BmtI	GCTAGC	1 cut(s)	636
BmuI	ACTGGG	1 cut(s)	650
BpuEI	CTTGAG	1 cut(s)	343
Bsa29I	ATCGAT	1 cut(s)	303
BsaBI	GATNNNNATC	1 cut(s)	771
BsaJI	CCNNGG	1 cut(s)	587
Bsc4I	CCNNNNNNNGG	2 cut(s)	662, 695
Bse1I	ACTGG	2 cut(s)	264, 656
Bse3DI	GCAATG	3 cut(s)	210, 288, 643
Bse8I	GATNNNNATC	1 cut(s)	771
BseBI	CCWGG	2 cut(s)	330, 836
BseCI	ATCGAT	1 cut(s)	303
BseDI	CCNNGG	1 cut(s)	587
BseGI	GGATG	2 cut(s)	784, 855
BseJI	GATNNNNATC	1 cut(s)	771
BseLI	CCNNNNNNNGG	2 cut(s)	662, 695
BseMI	GCAATG	3 cut(s)	210, 288, 643
BseMII	CTCAG	2 cut(s)	285, 567
BseNI	ACTGG	2 cut(s)	264, 656
BseRI	GAGGAG	1 cut(s)	660
BseSI	GKGCMC	1 cut(s)	702
BseXI	GCAGC	3 cut(s)	37, 239, 744
BshVI	ATCGAT	1 cut(s)	303
BsiHKAI	GWGCWC	1 cut(s)	454
BslI	CCNNNNNNNGG	2 cut(s)	662, 695
Bsp1286I	GDGCHC	2 cut(s)	454, 702
Bsp1407I	TGTACA	1 cut(s)	44
Bsp143I	GATC	3 cut(s)	271, 386, 666
BspACI	CCGC	4 cut(s)	120, 384, 610, 826
BspCNI	CTCAG	2 cut(s)	286, 568
BspDI	ATCGAT	1 cut(s)	303
BspHI	TCATGA	1 cut(s)	274
BspLI	GGNNCC	2 cut(s)	388, 833
BspMAI	CTGCAG	1 cut(s)	229
BspOI	GCTAGC	1 cut(s)	636
BspPI	GGATC	3 cut(s)	381, 394, 674
BsrBI	CCGCTC	1 cut(s)	120
BsrDI	GCAATG	3 cut(s)	210, 288, 643
BsrGI	TGTACA	1 cut(s)	44
BsrI	ACTGG	2 cut(s)	264, 656
BssECI	CCNNGG	1 cut(s)	587
BssMI	GATC	3 cut(s)	271, 386, 666
BssT1I	CCWWGG	1 cut(s)	587
Bst2UI	CCWGG	2 cut(s)	330, 836
Bst4CI	ACNGT	1 cut(s)	819
BstAUI	TGTACA	1 cut(s)	44
BstC8I	GCNNGC	1 cut(s)	634
BstDEI	CTNAG	3 cut(s)	294, 391, 576
BstF5I	GGATG	2 cut(s)	784, 855
BstKTI	GATC	3 cut(s)	274, 389, 669
BstMBI	GATC	3 cut(s)	271, 386, 666
BstMWI	GCNNNNNNNGC	3 cut(s)	236, 290, 729
BstNI	CCWGG	2 cut(s)	330, 836
BstNSI	RCATGY	2 cut(s)	45, 177
BstSCI	CCNGG	2 cut(s)	328, 834
BstSFI	CTRYAG	1 cut(s)	225
BstSLI	GKGCMC	1 cut(s)	702
BstV1I	GCAGC	3 cut(s)	37, 239, 744
BstX2I	RGATCY	1 cut(s)	386
BstYI	RGATCY	1 cut(s)	386
Bsu15I	ATCGAT	1 cut(s)	303
BsuTUI	ATCGAT	1 cut(s)	303
BtsCI	GGATG	2 cut(s)	784, 855
BtsIMutI	CAGTG	1 cut(s)	663
Cac8I	GCNNGC	1 cut(s)	634
CaiI	CAGNNNCTG	2 cut(s)	76, 233
CciI	TCATGA	1 cut(s)	274
Cfr13I	GGNCC	1 cut(s)	365
ClaI	ATCGAT	1 cut(s)	303
CseI	GACGC	1 cut(s)	219
CsiI	ACCWGGT	1 cut(s)	328
Csp6I	GTAC	2 cut(s)	45, 820
CviAII	CATG	4 cut(s)	42, 174, 275, 695
CviQI	GTAC	2 cut(s)	45, 820
DdeI	CTNAG	3 cut(s)	294, 391, 576
DpnI	GATC	3 cut(s)	273, 388, 668
DpnII	GATC	3 cut(s)	271, 386, 666
EciI	GGCGGA	1 cut(s)	399
Eco130I	CCWWGG	1 cut(s)	587
Eco47I	GGWCC	1 cut(s)	365
EcoRII	CCWGG	2 cut(s)	328, 834
EcoT14I	CCWWGG	1 cut(s)	587
EcoT22I	ATGCAT	1 cut(s)	175
ErhI	CCWWGG	1 cut(s)	587
FaeI	CATG	4 cut(s)	45, 177, 278, 698
FatI	CATG	4 cut(s)	41, 173, 274, 694
FauI	CCCGC	1 cut(s)	113
FbaI	TGATCA	1 cut(s)	271
Fnu4HI	GCNGC	3 cut(s)	26, 228, 733
FokI	GGATG	2 cut(s)	791, 862
Fsp4HI	GCNGC	3 cut(s)	26, 228, 733
FspBI	CTAG	3 cut(s)	216, 581, 633
GluI	GCNGC	3 cut(s)	26, 228, 733
HgaI	GACGC	1 cut(s)	219
Hin1II	CATG	4 cut(s)	45, 177, 278, 698
HindIII	AAGCTT	1 cut(s)	541
HinfI	GANTC	8 cut(s)	64, 140, 373, 554, 758, 772, 785, 812
HphI	GGTGA	1 cut(s)	196
Hpy166II	GTNNAC	1 cut(s)	68
Hpy188I	TCNGA	2 cut(s)	349, 577
Hpy188III	TCNNGA	4 cut(s)	77, 275, 455, 776
Hpy8I	GTNNAC	1 cut(s)	68
HpyAV	CCTTC	1 cut(s)	635
HpyCH4III	ACNGT	1 cut(s)	819
HpyCH4V	TGCA	5 cut(s)	173, 227, 567, 682, 694
HpyF10VI	GCNNNNNNNGC	3 cut(s)	236, 290, 729
HpyF3I	CTNAG	3 cut(s)	294, 391, 576
Hsp92II	CATG	4 cut(s)	45, 177, 278, 698
Ksp22I	TGATCA	1 cut(s)	271
Kzo9I	GATC	3 cut(s)	271, 386, 666
LmnI	GCTCC	2 cut(s)	457, 491
Lsp1109I	GCAGC	3 cut(s)	37, 239, 744
LweI	GCATC	2 cut(s)	160, 769
MabI	ACCWGGT	1 cut(s)	328
MaeI	CTAG	3 cut(s)	216, 581, 633
MaeIII	GTNAC	2 cut(s)	615, 813
MalI	GATC	3 cut(s)	273, 388, 668
MbiI	CCGCTC	1 cut(s)	120
MboI	GATC	3 cut(s)	271, 386, 666
MboII	GAAGA	1 cut(s)	910
MflI	RGATCY	1 cut(s)	386
MhlI	GDGCHC	2 cut(s)	454, 702
MluCI	AATT	6 cut(s)	80, 263, 511, 525, 562, 625
MlyI	GAGTC	3 cut(s)	73, 382, 821
MmeI	TCCRAC	2 cut(s)	314, 774
MnlI	CCTC	8 cut(s)	180, 234, 352, 367, 541, 638, 641, 846
Mph1103I	ATGCAT	1 cut(s)	175
MseI	TTAA	2 cut(s)	516, 561
MspA1I	CMGCKG	2 cut(s)	735, 826
MspR9I	CCNGG	2 cut(s)	330, 836
MvaI	CCWGG	2 cut(s)	330, 836
MwoI	GCNNNNNNNGC	3 cut(s)	236, 290, 729
NdeII	GATC	3 cut(s)	271, 386, 666
NheI	GCTAGC	1 cut(s)	632
NlaIII	CATG	4 cut(s)	45, 177, 278, 698
NlaIV	GGNNCC	2 cut(s)	388, 833
NmuCI	GTSAC	1 cut(s)	813
NsiI	ATGCAT	1 cut(s)	175
NspI	RCATGY	2 cut(s)	45, 177
PagI	TCATGA	1 cut(s)	274
PciI	ACATGT	1 cut(s)	41
PfeI	GAWTC	5 cut(s)	140, 554, 758, 772, 785
PflMI	CCANNNNNTGG	1 cut(s)	662
PfoI	TCCNGGA	1 cut(s)	834
PkrI	GCNGC	3 cut(s)	27, 229, 734
PleI	GAGTC	3 cut(s)	72, 381, 820
PpsI	GAGTC	3 cut(s)	72, 381, 820
PscI	ACATGT	1 cut(s)	41
Psp6I	CCWGG	2 cut(s)	328, 834
PspGI	CCWGG	2 cut(s)	328, 834
PspN4I	GGNNCC	2 cut(s)	388, 833
PspPI	GGNCC	1 cut(s)	365
PstI	CTGCAG	1 cut(s)	229
PstNI	CAGNNNCTG	2 cut(s)	76, 233
PsuI	RGATCY	1 cut(s)	386
PvuII	CAGCTG	1 cut(s)	735
RsaI	GTAC	2 cut(s)	46, 821
RsaNI	GTAC	2 cut(s)	45, 820
SaqAI	TTAA	2 cut(s)	516, 561
SatI	GCNGC	3 cut(s)	26, 228, 733
Sau3AI	GATC	3 cut(s)	271, 386, 666
Sau96I	GGNCC	1 cut(s)	365
SchI	GAGTC	3 cut(s)	73, 382, 821
ScrFI	CCNGG	2 cut(s)	330, 836
SduI	GDGCHC	2 cut(s)	454, 702
SexAI	ACCWGGT	1 cut(s)	328
SfaNI	GCATC	2 cut(s)	160, 769
SfcI	CTRYAG	1 cut(s)	225
SinI	GGWCC	1 cut(s)	365
SmlI	CTYRAG	1 cut(s)	358
SmoI	CTYRAG	1 cut(s)	358
Sse9I	AATT	6 cut(s)	80, 263, 511, 525, 562, 625
SsiI	CCGC	4 cut(s)	120, 384, 610, 826
SspMI	CTAG	3 cut(s)	216, 581, 633
StyD4I	CCNGG	2 cut(s)	328, 834
StyI	CCWWGG	1 cut(s)	587
TaaI	ACNGT	1 cut(s)	819
TaqI	TCGA	3 cut(s)	303, 603, 801
TasI	AATT	6 cut(s)	80, 263, 511, 525, 562, 625
TatI	WGTACW	1 cut(s)	44
TfiI	GAWTC	5 cut(s)	140, 554, 758, 772, 785
Tru1I	TTAA	2 cut(s)	516, 561
Tru9I	TTAA	2 cut(s)	516, 561
TscAI	CASTG	1 cut(s)	663
TseFI	GTSAC	1 cut(s)	813
TseI	GCWGC	3 cut(s)	25, 227, 732
Tsp45I	GTSAC	1 cut(s)	813
TspDTI	ATGAA	5 cut(s)	277, 567, 585, 654, 785
TspGWI	ACGGA	2 cut(s)	386, 678
TspRI	CASTG	1 cut(s)	663
Van91I	CCANNNNNTGG	1 cut(s)	662
VpaK11BI	GGWCC	1 cut(s)	365
XapI	RAATTY	1 cut(s)	80
XceI	RCATGY	2 cut(s)	45, 177
XspI	CTAG	3 cut(s)	216, 581, 633
Zsp2I	ATGCAT	1 cut(s)	175

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.