Rh1AG291100

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Forward (+)
52112308 .. 52116162
3855 bp
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UTR
Exon/CDS
Intron
Rh1AG291100.1

Sequence Viewer

Length: 1650 bp
ATGTTCTATAATGCCTGGGTGGATGATCAGAGAAATACTATTAACATGATTACCGAGCTCTTCACATCTGGAAATCTAAGGCAATATCGTAAGAAGCATAAAAATGTGGATACAAAGGCCATAAGGAATTGGGCAAGGCAGATTCTCAGAGGTTTAGTCTATCTCCACAGTCAGAACCCGCCTATTATTCATAGGGACTTAAAATGTGACAATATTTTTATCAATGGAAACCACGGAGAAGTTAAAATTGGAGACCTGGGGTTGGCAACTGTTCTGAAACAGCCTGCTGCTCGAAGTGTGATTGGGACTCCCGAGTTTATGGCTCCAGAACTGTATGATGAGGAATATAATGAACTCATTGACGTGTATTCGTTTGGGATGTGCATGCTAGAGATGGTTACTTTTGAGTATCCATATAGTGAATGCAAAAGTCCTGCTCAAATATTTAAGAAGGTTACCTCAGGTGTTAAACCTGCAGCCCTTGGTAAGGTGCATGACCCCCAAATTAAAAAGTTCATTGAGAAATGTCTGGTTCCAATGTCTGAGAGATCTTCTGCAAAGGAGCTGCTTAAAGATCCATTCCTTCAAGTTGAGAACCCTAGGGAACCAATGCGTGATCCCTTAAAGTTACCTAACCAAAATCTCAAAGCATTAAATTTACCCAAGTCTGGGCCATTTTCCATGGACATAGATAGTGATTATAAGCAGCTCTCAGTAAGCACATGTACAGGAAGCAACCATGGAAGTCCACAGGTTTTGGAATTTCAAAGGAAAAGTAAGAACAATGAGTTTAGGTTAAGGGGGACAAAAAGTGATGATAACTCAGTATCATTGACCTTGCGTATTGCTGATGCATGCGGTAAGGTGAAGAATATAGATTTTCTCTTTTACCTTGATACTGATACTGCAGTCTCTCTGGCGGCTGAGATGGTTGAACATCTGGAATTAGCAGATCATGATGTGGCCTTCATTGCTGAATTTATTGATTACTTGATAATGAAACTCCTACCTGGTTGGAAGCCATCATCTGATAATTCCTCAGGTGGACTTACCTATGGTGGATCCGAATTCCTTGATGGCAAATCTATAGTGGCATGCCTGTGGGGTTCACCGTTATCTGGTGGCCCTGCTGGTTCAATGGTTGATCAAGCTTGTAGCGTCTGGGATAATTCTGATACAATTAGTTTTAATGGTGGCATTTCCTCTTATCCAAGCTTTACTGAATTTGCCGATGGACATTCAAATGCATCATTCGCTTCTGTGTTTCAGGCTGATGATGCTTCCACCAATATTAATAAAGCAGCTGAATCTGTTGGTTGCAACATTGTACATCCTAGGTATTCGTTTGTTGATGACAGAAGCTTGCAAGGAAATTACACTAGCAATGCAGGCCAAGTATTTCCTATCAATATCCCAAAGAACATAGAGTTGCCATCACATGATCAGAAAGTATCTAATGATATGAGCTTGTCAAGCAGCTGTTCATCGGTTTCTTTGGCAGTTGATATGGATGTTGAGCTGAAGTTGGAACTCGATACTATTGAGGCACAATACCAGAACTTGTTTCAAGAGCTTTCTAGGATGAGGGAGAAAGCATTGGAAGGGGCCAGAAAGAAATGGATAGAAAAGCAGAAACTAGCTGTTCACTAA

Protein Analysis

549

Amino Acids

61.17

Weight (kDa)

5.57

Isoelectric Point (pI)

40.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 10 - 195 5.5e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 10 - 189 1.8e-26 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0014800)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 702
Acc36I ACCTGC 1 cut(s) 481
AciI CCGC 3 cut(s) 179, 858, 920
AclWI GGATC 4 cut(s) 569, 611, 1056, 1069
AcsI RAATTY 5 cut(s) 655, 761, 977, 1067, 1223
AcuI CTGAAG 1 cut(s) 1541
AfaI GTAC 2 cut(s) 727, 1329
AfiI CCNNNNNNNGG 5 cut(s) 262, 487, 668, 669, 1118
AflIII ACRYGT 2 cut(s) 363, 722
AgsI TTSAA 6 cut(s) 587, 767, 935, 1137, 1242, 1568
AjiI CACGTC 1 cut(s) 364
AjnI CCWGG 3 cut(s) 14, 255, 1009
AjuI GAANNNNNNNTTGG 2 cut(s) 231, 263
Alw21I GWGCWC 1 cut(s) 60
Alw26I GTCTC 2 cut(s) 246, 916
AlwI GGATC 4 cut(s) 569, 611, 1056, 1069
Ama87I CYCGRG 1 cut(s) 311
AoxI GGCC 6 cut(s) 117, 671, 963, 1123, 1390, 1605
ApeKI GCWGC 6 cut(s) 287, 476, 565, 706, 1301, 1476
ApoI RAATTY 5 cut(s) 655, 761, 977, 1067, 1223
AseI ATTAAT 1 cut(s) 1293
AspA2I CCTAGG 2 cut(s) 599, 1334
AspS9I GGNCC 3 cut(s) 671, 1124, 1605
AsuHPI GGTGA 2 cut(s) 877, 1101
AvaI CYCGRG 1 cut(s) 311
AvrII CCTAGG 2 cut(s) 599, 1334
AxyI CCTNAGG 2 cut(s) 460, 1039
BaeI ACNNNNGTAYC 2 cut(s) 894, 927
BamHI GGATCC 1 cut(s) 1061
BanII GRGCYC 1 cut(s) 60
Bbv12I GWGCWC 1 cut(s) 60
BbvI GCAGC 6 cut(s) 274, 488, 552, 718, 1313, 1488
BccI CCATC 6 cut(s) 388, 922, 1030, 1070, 1226, 1441
BciT130I CCWGG 3 cut(s) 16, 257, 1011
BciVI GTATCC 2 cut(s) 103, 420
BclI TGATCA 3 cut(s) 25, 1144, 1441
BcoDI GTCTC 2 cut(s) 246, 916
BfaI CTAG 6 cut(s) 389, 600, 1335, 1380, 1578, 1637
BfmI CTRYAG 3 cut(s) 474, 906, 1086
BfuAI ACCTGC 1 cut(s) 481
BfuI GTATCC 2 cut(s) 103, 420
BglII AGATCT 1 cut(s) 548
BisI GCNGC 7 cut(s) 288, 477, 566, 707, 921, 1302, 1477
BlnI CCTAGG 2 cut(s) 599, 1334
BlsI GCNGC 7 cut(s) 289, 478, 567, 708, 922, 1303, 1478
Bme1390I CCNGG 3 cut(s) 16, 257, 1011
BmeT110I CYCGRG 1 cut(s) 311
BmgBI CACGTC 1 cut(s) 364
BmgT120I GGNCC 3 cut(s) 671, 1124, 1605
BmiI GGNNCC 5 cut(s) 324, 534, 606, 1063, 1606
BmrFI CCNGG 3 cut(s) 16, 257, 1011
BmsI GCATC 3 cut(s) 841, 1256, 1267
BpmI CTGGAG 1 cut(s) 309
BsaI GGTCTC 1 cut(s) 246
BsaJI CCNNGG 8 cut(s) 15, 232, 256, 481, 599, 681, 739, 1334
Bsc4I CCNNNNNNNGG 5 cut(s) 262, 487, 668, 669, 1118
Bse21I CCTNAGG 2 cut(s) 460, 1039
Bse3DI GCAATG 2 cut(s) 969, 1390
BseBI CCWGG 3 cut(s) 16, 257, 1011
BseDI CCNNGG 8 cut(s) 15, 232, 256, 481, 599, 681, 739, 1334
BseGI GGATG 5 cut(s) 28, 384, 1330, 1516, 1587
BseLI CCNNNNNNNGG 5 cut(s) 262, 487, 668, 669, 1118
BseMI GCAATG 2 cut(s) 969, 1390
BseMII CTCAG 7 cut(s) 160, 474, 534, 726, 837, 915, 1053
BseXI GCAGC 6 cut(s) 274, 488, 552, 718, 1313, 1488
BshFI GGCC 6 cut(s) 119, 673, 965, 1125, 1392, 1607
BsiHKAI GWGCWC 1 cut(s) 60
BsiHKCI CYCGRG 1 cut(s) 311
BslFI GGGAC 3 cut(s) 209, 319, 817
BslI CCNNNNNNNGG 5 cut(s) 262, 487, 668, 669, 1118
BsmAI GTCTC 2 cut(s) 246, 916
BsmFI GGGAC 3 cut(s) 209, 319, 817
BsmI GAATGC 1 cut(s) 428
BsnI GGCC 6 cut(s) 119, 673, 965, 1125, 1392, 1607
Bso31I GGTCTC 1 cut(s) 246
BsoBI CYCGRG 1 cut(s) 311
Bsp1286I GDGCHC 1 cut(s) 60
Bsp1407I TGTACA 2 cut(s) 725, 1327
Bsp143I GATC 8 cut(s) 25, 548, 574, 616, 952, 1061, 1144, 1441
Bsp19I CCATGG 2 cut(s) 681, 739
BspACI CCGC 3 cut(s) 179, 858, 920
BspANI GGCC 6 cut(s) 119, 673, 965, 1125, 1392, 1607
BspCNI CTCAG 7 cut(s) 159, 473, 535, 725, 836, 916, 1052
BspHI TCATGA 1 cut(s) 955
BspLI GGNNCC 5 cut(s) 324, 534, 606, 1063, 1606
BspMAI CTGCAG 2 cut(s) 478, 910
BspMI ACCTGC 1 cut(s) 481
BspPI GGATC 4 cut(s) 569, 611, 1056, 1069
BspQI GCTCTTC 1 cut(s) 65
BspTNI GGTCTC 1 cut(s) 246
BsrDI GCAATG 2 cut(s) 969, 1390
BsrGI TGTACA 2 cut(s) 725, 1327
BssECI CCNNGG 8 cut(s) 15, 232, 256, 481, 599, 681, 739, 1334
BssMI GATC 8 cut(s) 25, 548, 574, 616, 952, 1061, 1144, 1441
BssT1I CCWWGG 5 cut(s) 481, 599, 681, 739, 1334
Bst2UI CCWGG 3 cut(s) 16, 257, 1011
Bst4CI ACNGT 4 cut(s) 170, 271, 333, 1113
Bst6I CTCTTC 1 cut(s) 65
BstAUI TGTACA 2 cut(s) 725, 1327
BstC8I GCNNGC 6 cut(s) 285, 386, 856, 1096, 1364, 1390
BstDEI CTNAG 8 cut(s) 77, 146, 460, 543, 712, 823, 924, 1039
BstDSI CCRYGG 3 cut(s) 232, 681, 739
BstEII GGTNACC 1 cut(s) 454
BstENI CCTNNNNNAGG 1 cut(s) 485
BstF5I GGATG 5 cut(s) 28, 384, 1330, 1516, 1587
BstKTI GATC 8 cut(s) 28, 551, 577, 619, 955, 1064, 1147, 1444
BstMAI GTCTC 2 cut(s) 246, 916
BstMBI GATC 8 cut(s) 25, 548, 574, 616, 952, 1061, 1144, 1441
BstMWI GCNNNNNNNGC 5 cut(s) 971, 1253, 1277, 1389, 1473
BstNI CCWGG 3 cut(s) 16, 257, 1011
BstNSI RCATGY 4 cut(s) 388, 726, 858, 1098
BstPI GGTNACC 1 cut(s) 454
BstSCI CCNGG 3 cut(s) 14, 255, 1009
BstSFI CTRYAG 3 cut(s) 474, 906, 1086
BstV1I GCAGC 6 cut(s) 274, 488, 552, 718, 1313, 1488
BstX2I RGATCY 3 cut(s) 548, 574, 1061
BstYI RGATCY 3 cut(s) 548, 574, 1061
Bsu36I CCTNAGG 2 cut(s) 460, 1039
BsuI GTATCC 2 cut(s) 103, 420
BsuRI GGCC 6 cut(s) 119, 673, 965, 1125, 1392, 1607
BtgI CCRYGG 3 cut(s) 232, 681, 739
BtrI CACGTC 1 cut(s) 364
BtsCI GGATG 5 cut(s) 28, 384, 1330, 1516, 1587
BveI ACCTGC 1 cut(s) 481
Cac8I GCNNGC 6 cut(s) 285, 386, 856, 1096, 1364, 1390
CciI TCATGA 1 cut(s) 955
Cfr13I GGNCC 3 cut(s) 671, 1124, 1605
CseI GACGC 1 cut(s) 1147
CsiI ACCWGGT 1 cut(s) 1009
Csp6I GTAC 2 cut(s) 726, 1328
CspCI CAANNNNNGTGG 2 cut(s) 738, 773
CviQI GTAC 2 cut(s) 726, 1328
DdeI CTNAG 8 cut(s) 77, 146, 460, 543, 712, 823, 924, 1039
DpnI GATC 8 cut(s) 27, 550, 576, 618, 954, 1063, 1146, 1443
DpnII GATC 8 cut(s) 25, 548, 574, 616, 952, 1061, 1144, 1441
Eam1104I CTCTTC 1 cut(s) 65
EarI CTCTTC 1 cut(s) 65
Ecl136II GAGCTC 1 cut(s) 58
Eco130I CCWWGG 5 cut(s) 481, 599, 681, 739, 1334
Eco24I GRGCYC 1 cut(s) 60
Eco31I GGTCTC 1 cut(s) 246
Eco53kI GAGCTC 1 cut(s) 58
Eco57I CTGAAG 1 cut(s) 1541
Eco81I CCTNAGG 2 cut(s) 460, 1039
Eco88I CYCGRG 1 cut(s) 311
Eco91I GGTNACC 1 cut(s) 454
EcoICRI GAGCTC 1 cut(s) 58
EcoNI CCTNNNNNAGG 1 cut(s) 485
EcoO65I GGTNACC 1 cut(s) 454
EcoRI GAATTC 1 cut(s) 1067
EcoRII CCWGG 3 cut(s) 14, 255, 1009
EcoT14I CCWWGG 5 cut(s) 481, 599, 681, 739, 1334
EcoT22I ATGCAT 2 cut(s) 856, 1249
EcoT38I GRGCYC 1 cut(s) 60
ErhI CCWWGG 5 cut(s) 481, 599, 681, 739, 1334
FaqI GGGAC 3 cut(s) 209, 319, 817
FauI CCCGC 1 cut(s) 186
FbaI TGATCA 3 cut(s) 25, 1144, 1441
Fnu4HI GCNGC 7 cut(s) 288, 477, 566, 707, 921, 1302, 1477
FokI GGATG 5 cut(s) 35, 391, 1317, 1523, 1594
FriOI GRGCYC 1 cut(s) 60
Fsp4HI GCNGC 7 cut(s) 288, 477, 566, 707, 921, 1302, 1477
FspBI CTAG 6 cut(s) 389, 600, 1335, 1380, 1578, 1637
GluI GCNGC 7 cut(s) 288, 477, 566, 707, 921, 1302, 1477
GsuI CTGGAG 1 cut(s) 309
HaeIII GGCC 6 cut(s) 119, 673, 965, 1125, 1392, 1607
HgaI GACGC 1 cut(s) 1147
HindIII AAGCTT 3 cut(s) 1149, 1213, 1360
HinfI GANTC 3 cut(s) 142, 307, 1307
HphI GGTGA 2 cut(s) 877, 1101
Hpy166II GTNNAC 4 cut(s) 749, 1046, 1109, 1645
Hpy188I TCNGA 9 cut(s) 30, 149, 174, 276, 544, 1030, 1066, 1174, 1446
Hpy188III TCNNGA 6 cut(s) 69, 311, 326, 941, 956, 1568
Hpy8I GTNNAC 4 cut(s) 749, 1046, 1109, 1645
HpyAV CCTTC 4 cut(s) 445, 593, 976, 1595
HpyCH4III ACNGT 4 cut(s) 170, 271, 333, 1113
HpyCH4IV ACGT 1 cut(s) 363
HpyF10VI GCNNNNNNNGC 5 cut(s) 971, 1253, 1277, 1389, 1473
HpyF3I CTNAG 8 cut(s) 77, 146, 460, 543, 712, 823, 924, 1039
HpySE526I ACGT 1 cut(s) 363
Ksp22I TGATCA 3 cut(s) 25, 1144, 1441
Kzo9I GATC 8 cut(s) 25, 548, 574, 616, 952, 1061, 1144, 1441
LguI GCTCTTC 1 cut(s) 65
LmnI GCTCC 2 cut(s) 328, 562
Lsp1109I GCAGC 6 cut(s) 274, 488, 552, 718, 1313, 1488
LweI GCATC 3 cut(s) 841, 1256, 1267
MabI ACCWGGT 1 cut(s) 1009
MaeI CTAG 6 cut(s) 389, 600, 1335, 1380, 1578, 1637
MaeII ACGT 1 cut(s) 363
MaeIII GTNAC 4 cut(s) 206, 397, 454, 627
MalI GATC 8 cut(s) 27, 550, 576, 618, 954, 1063, 1146, 1443
MboI GATC 8 cut(s) 25, 548, 574, 616, 952, 1061, 1144, 1441
MboII GAAGA 3 cut(s) 52, 543, 880
MflI RGATCY 3 cut(s) 548, 574, 1061
MhlI GDGCHC 1 cut(s) 60
MlyI GAGTC 1 cut(s) 301
MmeI TCCRAC 2 cut(s) 995, 1506
MnlI CCTC 7 cut(s) 143, 334, 469, 1048, 1213, 1537, 1578
Mph1103I ATGCAT 2 cut(s) 856, 1249
MslI CAYNNNNRTG 4 cut(s) 102, 362, 1099, 1242
MspA1I CMGCKG 2 cut(s) 1304, 1479
MspR9I CCNGG 3 cut(s) 16, 257, 1011
Mva1269I GAATGC 1 cut(s) 428
MvaI CCWGG 3 cut(s) 16, 257, 1011
MwoI GCNNNNNNNGC 5 cut(s) 971, 1253, 1277, 1389, 1473
NcoI CCATGG 2 cut(s) 681, 739
NdeII GATC 8 cut(s) 25, 548, 574, 616, 952, 1061, 1144, 1441
NlaIV GGNNCC 5 cut(s) 324, 534, 606, 1063, 1606
NmuCI GTSAC 1 cut(s) 206
NsiI ATGCAT 2 cut(s) 856, 1249
NspI RCATGY 4 cut(s) 388, 726, 858, 1098
PaeI GCATGC 3 cut(s) 388, 858, 1098
PagI TCATGA 1 cut(s) 955
PciI ACATGT 1 cut(s) 722
PciSI GCTCTTC 1 cut(s) 65
PctI GAATGC 1 cut(s) 428
PfeI GAWTC 2 cut(s) 142, 1307
PkrI GCNGC 7 cut(s) 289, 478, 567, 708, 922, 1303, 1478
PleI GAGTC 1 cut(s) 301
PpsI GAGTC 1 cut(s) 301
PscI ACATGT 1 cut(s) 722
PshBI ATTAAT 1 cut(s) 1293
PsiI TTATAA 1 cut(s) 702
Psp124BI GAGCTC 1 cut(s) 60
Psp6I CCWGG 3 cut(s) 14, 255, 1009
PspEI GGTNACC 1 cut(s) 454
PspGI CCWGG 3 cut(s) 14, 255, 1009
PspN4I GGNNCC 5 cut(s) 324, 534, 606, 1063, 1606
PspPI GGNCC 3 cut(s) 671, 1124, 1605
PstI CTGCAG 2 cut(s) 478, 910
PsuI RGATCY 3 cut(s) 548, 574, 1061
PvuII CAGCTG 2 cut(s) 1304, 1479
RsaI GTAC 2 cut(s) 727, 1329
RsaNI GTAC 2 cut(s) 726, 1328
RseI CAYNNNNRTG 4 cut(s) 102, 362, 1099, 1242
SacI GAGCTC 1 cut(s) 60
SapI GCTCTTC 1 cut(s) 65
SatI GCNGC 7 cut(s) 288, 477, 566, 707, 921, 1302, 1477
Sau3AI GATC 8 cut(s) 25, 548, 574, 616, 952, 1061, 1144, 1441
Sau96I GGNCC 3 cut(s) 671, 1124, 1605
SchI GAGTC 1 cut(s) 301
ScrFI CCNGG 3 cut(s) 16, 257, 1011
SduI GDGCHC 1 cut(s) 60
SexAI ACCWGGT 1 cut(s) 1009
SfaNI GCATC 3 cut(s) 841, 1256, 1267
SfcI CTRYAG 3 cut(s) 474, 906, 1086
SmiMI CAYNNNNRTG 4 cut(s) 102, 362, 1099, 1242
SphI GCATGC 3 cut(s) 388, 858, 1098
SsiI CCGC 3 cut(s) 179, 858, 920
SspI AATATT 3 cut(s) 214, 444, 1291
SspMI CTAG 6 cut(s) 389, 600, 1335, 1380, 1578, 1637
SstI GAGCTC 1 cut(s) 60
StyD4I CCNGG 3 cut(s) 14, 255, 1009
StyI CCWWGG 5 cut(s) 481, 599, 681, 739, 1334
TaaI ACNGT 4 cut(s) 170, 271, 333, 1113
TaiI ACGT 1 cut(s) 366
TaqI TCGA 2 cut(s) 292, 1533
TatI WGTACW 2 cut(s) 725, 1327
TauI GCSGC 1 cut(s) 923
TfiI GAWTC 2 cut(s) 142, 1307
TseFI GTSAC 1 cut(s) 206
TseI GCWGC 6 cut(s) 287, 476, 565, 706, 1301, 1476
Tsp45I GTSAC 1 cut(s) 206
TspDTI ATGAA 6 cut(s) 179, 366, 505, 958, 1013, 1473
TspGWI ACGGA 1 cut(s) 249
VspI ATTAAT 1 cut(s) 1293
XagI CCTNNNNNAGG 1 cut(s) 485
XapI RAATTY 5 cut(s) 655, 761, 977, 1067, 1223
XceI RCATGY 4 cut(s) 388, 726, 858, 1098
XmaJI CCTAGG 2 cut(s) 599, 1334
XspI CTAG 6 cut(s) 389, 600, 1335, 1380, 1578, 1637
Zsp2I ATGCAT 2 cut(s) 856, 1249
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.