Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0014800

Physical Location & Seq

Genomic Coordinates Forward (+)

17310022 .. 17312077

Gene Structure 2056 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g15170.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1182 bp

ATGAATTCAGGGGTCGGATTGGTATCGCCAGCAAGTAATGGGATGTTTCCAGTGGCGAAGCTCCTCGATGAAGAGGTCGATTTTGTAGAGAAGGACCCAAGCAATCGATATGTTCGGGCGTTCGATGAAGTTGATGGACTAGAAGTGGCTTGGAGCCGGGTGAAGATTGATGCTGTCTTGCGGTCACCAGAAGATTTGGAAAAATTGTATTCTGAAGTTCATCTTCTGAAATCACTGAAACATGAAAATATTATTAAGTTGTATAGTTCATGGGTGGATGATCAGAAAAATACGATTAACATGATTACGGAGCTCTTCACATCTGGAAGCCTAAGGCAATATCGTAAGAAGCATAAAAATGTGGATACAAAGGCCATAAGGAACTGGGCAAGGCAGATTCTCCGAGGTTTAGCCTTTCTCCACAGTCATAGCCCCCCTATCATTCATAGAGACTTAAAATGTGACAATATTTTCATTAATGGAAATCATGGAGAAGTTAAAATCGGAGACCTTGGATTGGCAACTGTTATGCAGCAGCCTACCGCTCGCAGTGTGATTGGGACTCCCGAGTTTATGGCTCCAGAGCTCTATGAAGAGGAATATAATGAACTCGTTGACATATACTCCTTCGGAATGTGCATGTTAGAGATGATTACTTTTGAGTATCCATATAGTGAATGCAAAAGTCCTGCTCAAATATTTAAGAAGGTTACCTCTGGCATTAAACCTGCAGCCCTTGGGAAGGTGAATGACCCCCAAATCAAGGAGTTCATTGAAAAATGTCTGGTTCCAGCATCTGAGAGGGTATCGGCGAAAGAGTTGCTCAGAGATGCATTCCTTCAAGTTGACAATCAAAAGGAACCAATCCGTGATCCCTTACGGTTGCCTAACCAGAGTCTAAAAGCAACAAATTTACCAAAGTCTGGGCCTTTATCCATGGACATAGATATTGACTACAAGCAGCTATCTATAACCACATGTACAGGAAGCAACAATGGGAGTCCACTGGTTCTGGAATTTCAAAGGACACATAAGAACAACGAGTTCAGGTTAAGCGGGATAAAAAATGACGATGATTCAGTATCATTGACCTTGCGTATAGCTGATGCATGTGGTAAGTATGCAAACTGGGAAATTGGATATACAAGTATGTCTAGTATTGTTATTCCTGTCAGGATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OSR1_C Pkinase

Protein Analysis

394

Amino Acids

44.38

Weight (kDa)

5.98

Isoelectric Point (pI)

39.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014800)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g17050 FvH4_7g17050
malus_domestica	MD01G1085200.v1.1 MD07G1154200.v1.1
prunus_persica	Prupe.2G192800_v2.0.a1
pyrus_communis	pycom07g15170
rosa_chinensis	RchiOBHm_Chr1g0360461
rosa_laevigata	RLG00000027806
rosa_multiflora	Rmu_ssc0000337.1_g000001
rosa_roxburghii	Rroxscaffold_4G00296090
rosa_rugosa	Rorug01G0277900 Rorug01G0278000
rosa_samantha	Rh1AG291100 Rh1BG256100 Rh1CG273800 Rh1DG285900
rosa_wichuraiana	Rw1G025780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	736
AccB7I	CCANNNNNTGG	1 cut(s)	923
AccBSI	CCGCTC	1 cut(s)	545
AciI	CCGC	3 cut(s)	181, 543, 1056
AclWI	GGATC	1 cut(s)	866
AcsI	RAATTY	3 cut(s)	4, 910, 1016
AcuI	CTGAAG	1 cut(s)	234
AfaI	GTAC	1 cut(s)	982
AfiI	CCNNNNNNNGG	4 cut(s)	517, 742, 763, 923
AflIII	ACRYGT	1 cut(s)	977
AgsI	TTSAA	3 cut(s)	776, 842, 1022
AluBI	AGCT	5 cut(s)	61, 313, 586, 964, 1103
AluI	AGCT	5 cut(s)	61, 313, 586, 964, 1103
Alw21I	GWGCWC	2 cut(s)	315, 588
Alw26I	GTCTC	2 cut(s)	444, 501
AlwI	GGATC	1 cut(s)	866
AlwNI	CAGNNNCTG	1 cut(s)	797
Ama87I	CYCGRG	1 cut(s)	566
AoxI	GGCC	2 cut(s)	372, 926
ApeKI	GCWGC	4 cut(s)	532, 535, 731, 961
ApoI	RAATTY	3 cut(s)	4, 910, 1016
AseI	ATTAAT	1 cut(s)	477
AspS9I	GGNCC	2 cut(s)	94, 926
AsuC2I	CCSGG	1 cut(s)	158
AsuHPI	GGTGA	3 cut(s)	172, 177, 757
AvaI	CYCGRG	1 cut(s)	566
AvaII	GGWCC	1 cut(s)	94
AxyI	CCTNAGG	1 cut(s)	332
BanII	GRGCYC	2 cut(s)	315, 588
Bbv12I	GWGCWC	2 cut(s)	315, 588
BbvI	GCAGC	4 cut(s)	544, 547, 743, 973
BccI	CCATC	1 cut(s)	128
BcgI	CGANNNNNNTGC	2 cut(s)	802, 836
BciVI	GTATCC	2 cut(s)	358, 675
BclI	TGATCA	1 cut(s)	280
BcnI	CCSGG	1 cut(s)	158
BcoDI	GTCTC	2 cut(s)	444, 501
BfaI	CTAG	2 cut(s)	140, 1155
BfmI	CTRYAG	1 cut(s)	729
BfuAI	ACCTGC	1 cut(s)	736
BfuI	GTATCC	2 cut(s)	358, 675
BisI	GCNGC	4 cut(s)	533, 536, 732, 962
BlsI	GCNGC	4 cut(s)	534, 537, 733, 963
Bme1390I	CCNGG	1 cut(s)	158
Bme18I	GGWCC	1 cut(s)	94
BmeT110I	CYCGRG	1 cut(s)	566
BmgT120I	GGNCC	2 cut(s)	94, 926
BmiI	GGNNCC	5 cut(s)	96, 155, 579, 789, 861
BmrFI	CCNGG	1 cut(s)	158
BmrI	ACTGGG	2 cut(s)	394, 1138
BmsI	GCATC	4 cut(s)	160, 803, 820, 1096
BmuI	ACTGGG	2 cut(s)	394, 1138
BpmI	CTGGAG	1 cut(s)	564
BpuMI	CCSGG	1 cut(s)	158
Bsa29I	ATCGAT	1 cut(s)	106
BsaBI	GATNNNNATC	1 cut(s)	22
BsaI	GGTCTC	1 cut(s)	501
BsaJI	CCNNGG	4 cut(s)	403, 511, 736, 936
BsaXI	ACNNNNNCTCC	2 cut(s)	608, 638
Bsc4I	CCNNNNNNNGG	4 cut(s)	517, 742, 763, 923
Bse1I	ACTGG	4 cut(s)	50, 389, 1011, 1133
Bse21I	CCTNAGG	1 cut(s)	332
Bse8I	GATNNNNATC	1 cut(s)	22
BseCI	ATCGAT	1 cut(s)	106
BseDI	CCNNGG	4 cut(s)	403, 511, 736, 936
BseGI	GGATG	3 cut(s)	48, 283, 1182
BseJI	GATNNNNATC	1 cut(s)	22
BseLI	CCNNNNNNNGG	4 cut(s)	517, 742, 763, 923
BseMII	CTCAG	2 cut(s)	789, 838
BseNI	ACTGG	4 cut(s)	50, 389, 1011, 1133
BseRI	GAGGAG	1 cut(s)	53
BseXI	GCAGC	4 cut(s)	544, 547, 743, 973
BshFI	GGCC	2 cut(s)	374, 928
BshVI	ATCGAT	1 cut(s)	106
BsiHKAI	GWGCWC	2 cut(s)	315, 588
BsiHKCI	CYCGRG	1 cut(s)	566
BsiSI	CCGG	1 cut(s)	157
BslFI	GGGAC	1 cut(s)	574
BslI	CCNNNNNNNGG	4 cut(s)	517, 742, 763, 923
BsmAI	GTCTC	2 cut(s)	444, 501
BsmFI	GGGAC	1 cut(s)	574
BsmI	GAATGC	2 cut(s)	683, 833
BsnI	GGCC	2 cut(s)	374, 928
Bso31I	GGTCTC	1 cut(s)	501
BsoBI	CYCGRG	1 cut(s)	566
Bsp1286I	GDGCHC	2 cut(s)	315, 588
Bsp1407I	TGTACA	1 cut(s)	980
Bsp143I	GATC	2 cut(s)	280, 871
Bsp19I	CCATGG	1 cut(s)	936
BspACI	CCGC	3 cut(s)	181, 543, 1056
BspANI	GGCC	2 cut(s)	374, 928
BspCNI	CTCAG	2 cut(s)	790, 837
BspDI	ATCGAT	1 cut(s)	106
BspLI	GGNNCC	5 cut(s)	96, 155, 579, 789, 861
BspMAI	CTGCAG	1 cut(s)	733
BspMI	ACCTGC	1 cut(s)	736
BspPI	GGATC	1 cut(s)	866
BspQI	GCTCTTC	1 cut(s)	320
BspTNI	GGTCTC	1 cut(s)	501
BsrBI	CCGCTC	1 cut(s)	545
BsrGI	TGTACA	1 cut(s)	980
BsrI	ACTGG	4 cut(s)	50, 389, 1011, 1133
BssECI	CCNNGG	4 cut(s)	403, 511, 736, 936
BssMI	GATC	2 cut(s)	280, 871
BssT1I	CCWWGG	3 cut(s)	511, 736, 936
Bst4CI	ACNGT	3 cut(s)	425, 526, 882
Bst6I	CTCTTC	3 cut(s)	66, 320, 588
BstAUI	TGTACA	1 cut(s)	980
BstC8I	GCNNGC	2 cut(s)	30, 547
BstDEI	CTNAG	3 cut(s)	332, 798, 824
BstDSI	CCRYGG	1 cut(s)	936
BstEII	GGTNACC	2 cut(s)	183, 709
BstENI	CCTNNNNNAGG	1 cut(s)	740
BstF5I	GGATG	3 cut(s)	48, 283, 1182
BstKTI	GATC	2 cut(s)	283, 874
BstMAI	GTCTC	2 cut(s)	444, 501
BstMBI	GATC	2 cut(s)	280, 871
BstNSI	RCATGY	3 cut(s)	643, 981, 1113
BstPI	GGTNACC	2 cut(s)	183, 709
BstSCI	CCNGG	1 cut(s)	156
BstSFI	CTRYAG	1 cut(s)	729
BstV1I	GCAGC	4 cut(s)	544, 547, 743, 973
Bsu15I	ATCGAT	1 cut(s)	106
Bsu36I	CCTNAGG	1 cut(s)	332
BsuI	GTATCC	2 cut(s)	358, 675
BsuRI	GGCC	2 cut(s)	374, 928
BsuTUI	ATCGAT	1 cut(s)	106
BtgI	CCRYGG	1 cut(s)	936
BtsCI	GGATG	3 cut(s)	48, 283, 1182
BtsI	GCAGTG	1 cut(s)	556
BtsIMutI	CAGTG	4 cut(s)	57, 233, 556, 1004
BveI	ACCTGC	1 cut(s)	736
Cac8I	GCNNGC	2 cut(s)	30, 547
CaiI	CAGNNNCTG	1 cut(s)	797
Cfr13I	GGNCC	2 cut(s)	94, 926
ClaI	ATCGAT	1 cut(s)	106
Csp6I	GTAC	1 cut(s)	981
CviAII	CATG	8 cut(s)	242, 270, 301, 488, 640, 937, 978, 1110
CviQI	GTAC	1 cut(s)	981
DdeI	CTNAG	3 cut(s)	332, 798, 824
DpnI	GATC	2 cut(s)	282, 873
DpnII	GATC	2 cut(s)	280, 871
Eam1104I	CTCTTC	3 cut(s)	66, 320, 588
EarI	CTCTTC	3 cut(s)	66, 320, 588
Ecl136II	GAGCTC	2 cut(s)	313, 586
Eco130I	CCWWGG	3 cut(s)	511, 736, 936
Eco24I	GRGCYC	2 cut(s)	315, 588
Eco31I	GGTCTC	1 cut(s)	501
Eco47I	GGWCC	1 cut(s)	94
Eco53kI	GAGCTC	2 cut(s)	313, 586
Eco57I	CTGAAG	1 cut(s)	234
Eco81I	CCTNAGG	1 cut(s)	332
Eco88I	CYCGRG	1 cut(s)	566
Eco91I	GGTNACC	2 cut(s)	183, 709
EcoICRI	GAGCTC	2 cut(s)	313, 586
EcoNI	CCTNNNNNAGG	1 cut(s)	740
EcoO109I	RGGNCCY	1 cut(s)	94
EcoO65I	GGTNACC	2 cut(s)	183, 709
EcoRI	GAATTC	1 cut(s)	4
EcoT14I	CCWWGG	3 cut(s)	511, 736, 936
EcoT22I	ATGCAT	2 cut(s)	835, 1111
EcoT38I	GRGCYC	2 cut(s)	315, 588
ErhI	CCWWGG	3 cut(s)	511, 736, 936
FaeI	CATG	8 cut(s)	245, 273, 304, 491, 643, 940, 981, 1113
FalI	AAGNNNNNCTT	2 cut(s)	207, 239
FaqI	GGGAC	1 cut(s)	574
FatI	CATG	8 cut(s)	241, 269, 300, 487, 639, 936, 977, 1109
FauI	CCCGC	1 cut(s)	1049
FbaI	TGATCA	1 cut(s)	280
Fnu4HI	GCNGC	4 cut(s)	533, 536, 732, 962
FokI	GGATG	2 cut(s)	55, 290
FriOI	GRGCYC	2 cut(s)	315, 588
Fsp4HI	GCNGC	4 cut(s)	533, 536, 732, 962
FspBI	CTAG	2 cut(s)	140, 1155
GluI	GCNGC	4 cut(s)	533, 536, 732, 962
GsuI	CTGGAG	1 cut(s)	564
HaeIII	GGCC	2 cut(s)	374, 928
HapII	CCGG	1 cut(s)	157
Hin1II	CATG	8 cut(s)	245, 273, 304, 491, 643, 940, 981, 1113
HincII	GTYRAC	2 cut(s)	616, 847
HindII	GTYRAC	2 cut(s)	616, 847
HinfI	GANTC	5 cut(s)	397, 562, 895, 1000, 1076
HpaII	CCGG	1 cut(s)	157
HphI	GGTGA	3 cut(s)	172, 177, 757
Hpy166II	GTNNAC	3 cut(s)	616, 847, 1004
Hpy188I	TCNGA	9 cut(s)	17, 214, 228, 285, 404, 506, 632, 799, 827
Hpy188III	TCNNGA	5 cut(s)	324, 566, 581, 1013, 1174
Hpy8I	GTNNAC	3 cut(s)	616, 847, 1004
HpyAV	CCTTC	5 cut(s)	85, 637, 700, 736, 848
HpyCH4III	ACNGT	3 cut(s)	425, 526, 882
HpyCH4V	TGCA	7 cut(s)	532, 639, 681, 731, 833, 1109, 1124
HpyF3I	CTNAG	3 cut(s)	332, 798, 824
Hsp92II	CATG	8 cut(s)	245, 273, 304, 491, 643, 940, 981, 1113
Ksp22I	TGATCA	1 cut(s)	280
Kzo9I	GATC	2 cut(s)	280, 871
LguI	GCTCTTC	1 cut(s)	320
LmnI	GCTCC	4 cut(s)	66, 153, 310, 583
Lsp1109I	GCAGC	4 cut(s)	544, 547, 743, 973
LweI	GCATC	4 cut(s)	160, 803, 820, 1096
MaeI	CTAG	2 cut(s)	140, 1155
MaeIII	GTNAC	3 cut(s)	183, 461, 709
MalI	GATC	2 cut(s)	282, 873
MbiI	CCGCTC	1 cut(s)	545
MboI	GATC	2 cut(s)	280, 871
MboII	GAAGA	6 cut(s)	83, 175, 203, 215, 307, 605
MhlI	GDGCHC	2 cut(s)	315, 588
MluCI	AATT	5 cut(s)	4, 203, 910, 1016, 1134
MlyI	GAGTC	3 cut(s)	556, 904, 1009
MnlI	CCTC	6 cut(s)	67, 74, 398, 589, 724, 795
Mph1103I	ATGCAT	2 cut(s)	835, 1111
MseI	TTAA	8 cut(s)	255, 297, 455, 477, 498, 702, 723, 1052
MslI	CAYNNNNRTG	1 cut(s)	357
MspI	CCGG	1 cut(s)	157
MspR9I	CCNGG	1 cut(s)	158
Mva1269I	GAATGC	2 cut(s)	683, 833
NciI	CCSGG	1 cut(s)	158
NcoI	CCATGG	1 cut(s)	936
NdeII	GATC	2 cut(s)	280, 871
NlaIII	CATG	8 cut(s)	245, 273, 304, 491, 643, 940, 981, 1113
NlaIV	GGNNCC	5 cut(s)	96, 155, 579, 789, 861
NmuCI	GTSAC	2 cut(s)	183, 461
NsiI	ATGCAT	2 cut(s)	835, 1111
NspI	RCATGY	3 cut(s)	643, 981, 1113
PciI	ACATGT	1 cut(s)	977
PciSI	GCTCTTC	1 cut(s)	320
PctI	GAATGC	2 cut(s)	683, 833
PfeI	GAWTC	2 cut(s)	397, 1076
PflMI	CCANNNNNTGG	1 cut(s)	923
PkrI	GCNGC	4 cut(s)	534, 537, 733, 963
PleI	GAGTC	3 cut(s)	556, 903, 1008
PpsI	GAGTC	3 cut(s)	556, 903, 1008
PpuMI	RGGWCCY	1 cut(s)	94
PscI	ACATGT	1 cut(s)	977
PshBI	ATTAAT	1 cut(s)	477
Psp124BI	GAGCTC	2 cut(s)	315, 588
Psp5II	RGGWCCY	1 cut(s)	94
PspEI	GGTNACC	2 cut(s)	183, 709
PspN4I	GGNNCC	5 cut(s)	96, 155, 579, 789, 861
PspPI	GGNCC	2 cut(s)	94, 926
PspPPI	RGGWCCY	1 cut(s)	94
PstI	CTGCAG	1 cut(s)	733
PstNI	CAGNNNCTG	1 cut(s)	797
RsaI	GTAC	1 cut(s)	982
RsaNI	GTAC	1 cut(s)	981
RseI	CAYNNNNRTG	1 cut(s)	357
SacI	GAGCTC	2 cut(s)	315, 588
SapI	GCTCTTC	1 cut(s)	320
SaqAI	TTAA	8 cut(s)	255, 297, 455, 477, 498, 702, 723, 1052
SatI	GCNGC	4 cut(s)	533, 536, 732, 962
Sau3AI	GATC	2 cut(s)	280, 871
Sau96I	GGNCC	2 cut(s)	94, 926
SchI	GAGTC	3 cut(s)	556, 904, 1009
ScrFI	CCNGG	1 cut(s)	158
SduI	GDGCHC	2 cut(s)	315, 588
SfaNI	GCATC	4 cut(s)	160, 803, 820, 1096
SfcI	CTRYAG	1 cut(s)	729
SinI	GGWCC	1 cut(s)	94
SmiMI	CAYNNNNRTG	1 cut(s)	357
Sse9I	AATT	5 cut(s)	4, 203, 910, 1016, 1134
SsiI	CCGC	3 cut(s)	181, 543, 1056
SspI	AATATT	3 cut(s)	250, 469, 699
SspMI	CTAG	2 cut(s)	140, 1155
SstI	GAGCTC	2 cut(s)	315, 588
StyD4I	CCNGG	1 cut(s)	156
StyI	CCWWGG	3 cut(s)	511, 736, 936
TaaI	ACNGT	3 cut(s)	425, 526, 882
TaqI	TCGA	4 cut(s)	66, 78, 106, 123
TasI	AATT	5 cut(s)	4, 203, 910, 1016, 1134
TatI	WGTACW	1 cut(s)	980
TfiI	GAWTC	2 cut(s)	397, 1076
Tru1I	TTAA	8 cut(s)	255, 297, 455, 477, 498, 702, 723, 1052
Tru9I	TTAA	8 cut(s)	255, 297, 455, 477, 498, 702, 723, 1052
TscAI	CASTG	4 cut(s)	57, 240, 556, 1011
TseFI	GTSAC	2 cut(s)	183, 461
TseI	GCWGC	4 cut(s)	532, 535, 731, 961
Tsp45I	GTSAC	2 cut(s)	183, 461
TspGWI	ACGGA	2 cut(s)	323, 857
TspRI	CASTG	4 cut(s)	57, 240, 556, 1011
Van91I	CCANNNNNTGG	1 cut(s)	923
VpaK11BI	GGWCC	1 cut(s)	94
VspI	ATTAAT	1 cut(s)	477
XagI	CCTNNNNNAGG	1 cut(s)	740
XapI	RAATTY	3 cut(s)	4, 910, 1016
XceI	RCATGY	3 cut(s)	643, 981, 1113
XspI	CTAG	2 cut(s)	140, 1155
Zsp2I	ATGCAT	2 cut(s)	835, 1111

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.