Rorug01G0278000

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
39094372 .. 39097659
3288 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0278000.1

Sequence Viewer

Length: 3162 bp
ATGTTGGAAGTCGTTTCACATGGTCGAACAAATTCACCAAAGAGAGACTTGACAGGGGCTTTCAATGTGAACAATGGAGAAGAAGATTCCCATATAGTCGAGTTATCACTCCATTGTCCTCTTTTGGTCGAAGTGAGGGAAGAAAAGAAGTCTTTCAAAAGGCCTCCAAGACGTTTTTGTTTTGAGGAGATGTGGCATGGGCATGATCAATGTGTAAGTATCATCCAGAAGCAGTGGTCACGCCCTCTTACGGGTAACGCTCTGTATCAGTTAGGGCAGAAGATACAATATACCGGAGAACAGCTCCTTCAATGGCACAGCGTGGAATTTGAAAAACAAAAAGTTGAGTTGCGTGTGGTCCAGGAGAAGCTCAATGATATAATGAAGGAGCCTTACTCTCCAATGCAATATGAAGAGCAGCGCTTGCTTCATGTAAAACTAAGCCAGCTACTAGCCCAACAAGAAAAGTACTGGAGGCAACGAAGTAGAACTATATGGCTCAAGGACGGAGATAGAAACTCTGCTTTTTTCCATCAGAAAGCTACCAATAGATACAATCAGAATTTGATAAAGGGTTTGGTGGATGACTTGGGCGAATGGCAATCTGATCCTGTAGTTGTTCGGGGCTTGCTGGTAGACTATTACAAGCAAGTCTTTACAGGAACAAGTACAAATGAGGAGGCTATACATGCTGTTGTTTCTGCCACTTCACCAAAAGTAACCCCTGAGGTGAATGAAGCCCTTCTTCAAACGTATACTGATGAAGAAATCAAGAATGCACTCTTCCAGATGCACCCTTCAAAAAGTTCGGGACCGGATGGCATGTCCCCATTCTTTTTCCAGAAATATTGGCACATAGTAGGTATGGATGTGTGCATTGCTATTCGAAATTTTCTAGAGAAAGGGGAAGCTGGGGATGCTTCTAACTTCACACACTTATGCTTAATTCCAAAAATTCAAAACCCTACTGATGCCTCTCACTTCAGACTTATAGCATTATGCAACGTTATTTATAGAATTTGTTCCAAAGTTGTTGCAAATAGGCTCAAAAGGTGTTTGCCAGATATTATCTCGCCATTACAGAGCGCTTATGTTCCAGGAAGACTCATCTCTGATAACACTTTAGTTGCTACGGAGGTATCTCATTTTATGCACAAGCTTACAACTCAGGCAGAAGGTTTCTTTTCCTTAAAGCTTGATATCAGCAAGGCATATGATAGGCTGGAGTGGAGCTTCTTGCATGCCATGTTAACCAGGTTAGGTTTTGCAACAACTTGGGTAAGTATGATTATGACTTGTGTGATGTCGGTTAGTTATGCAGAATTGGTTAATGGTGAAGCTACTCAGAAAATCATCCCCACAATGGGCATTAGGCAGGGTGATGTCGGTTTGTCAGCTCTCATTACACAATCTATGTCAAATGGCTCTATTACGGAAGCGTCGGGACAGAAAATAAACTTTCAAAAAAGTAGTGTGGTTTTCAGCAGGAATGTACCTGACGAGGTTCAAACCAACCTTGCTACCATTCTAGAGGTTCAGCGTGTTGATGAACATGACCGGTATCTTGGTCTCCCATTAAGACTTGGGAAATCAAAGTCTGCTATTTTTGCATATATCAAAGAGAAGCTCAGCAAAAAACTCATTGGATGGAAGTCAAAGATTCTTAGTTATGCGAGTAAGGAAGTTCTGATCAAAGCTGTTGCTCAAACAATGCCATTGTATACTATGAACTGTTATCTTTTGCCTAAGGGTCTTTGTGATGAGCTGCACCAATTGTGTGCTTCATTCTTTTGGGGAGATACAGATGAGAAAAAGAAAATTCATTGGCGTAGTTGGGAGAGAATGTGTCTTACAAAGCAAGAAGGAGGTACGGGGTTCAAGAATCTTTATGCTTATAACCTTGCAATGCTTGCAAAGCAAGGTTGGAGGATTGTCTCAAACCCAGACTCACTTATTGCCAGATTATATAAAGCACGATATTTTCCTCATTGCACCTTTTGGGAGGCAGACATGGGTGACTCTCCATCTTTTTCTTGGAGAAGTATTATGCATGGTAGGCCGGTTTTGCAAGCGGGGGTGAAATGGAGGATTGGTGATGGCACTAATGTGAGTATTTGGAATGATAAATGGATACCAAATTGCTCACAACCGCTGTTGGAAAGACCGGTAAATACTGAATTTGAGTTGGTTAGTGACTTGATCAACTCTTATGATAGAAGTTGGATTCTAGCTACAGTCCATTCTCTTTTTAATCCGGAAATTGCTAGCCGGGTTCTCTCTATACCTCTAGGTCGGCGTGTGACAAGTGATCGCCTCAATTGGAGTCCTGACAAACGAGGTAGATTCACGGTAAAGTCTGCTGATTGGATTGCACGTGAGACGGTGCTAGGTGATGTCTTAACAAGTACCTCAAGGGGAGACCCCTTTGCCATGCTTTGGAAAACTTTATGGAAAGCTCGAGTACCGGGTAAAGTGCAGATTTGCATCTGGAAGGCTGTAAATAATTTGTTACAGACTCGTGCCAGTTTGCTCAATAAGGGTTATATAGGGAATGCCAATTGTCTGCTCTATAATTACAGGTTAGAAGATACCTCCCACTTATTTTGTCAATGTCCTGTTGCAGTTGAGCTATTATCTGCACCTCCTCTAAATCTGCAAGCATCATTACTACCTTCTATTGATTTTAAAGAGTGGCTATTAGAGCGTGCAATGCATCTCAACTTGGCTACTTTTGAAAAATTGATAATGCTTCTGTGGACTTTATGGAAAAACCGAAACAGTCAACTATGGAATGGGGTAACACAGACTGCATCTAGCATGCTTCTCTTCTCTATGGCATGGCTAGATGAATTCCACCAAGCCAGGAACACAAACACAACTGTCGGTCATGGTGTTAGGGGTCCAAAACAACGCTGGAAGCCGGAATGTGAGGATCGGTGCAAATTAAATGTGGATGGCGCTTTTGTGCCTCAGATAACTAGGGGAGGAATTGGAGGAGTGCTTCGTGACTCTCATGGAAGTTTTAGGGCAGCCTTTGCCCACACGGTGCAGCATGTAGCCTCACCACAACAGTCGGAGCTTCTTGCCATCAGGAAGGGTTTGGACTTGGCTAAGTGTTGTGAAATTTTAATTAAAACTCGCAAGCGCACGAATCGTCGTTAG

Protein Analysis

1053

Amino Acids

120.25

Weight (kDa)

9.17

Isoelectric Point (pI)

36.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_1 PF00078 323 - 482 5.2e-15 Reverse transcriptase (RNA-dependent DNA polymerase)
zf-RVT PF13966 811 - 876 1.1e-12 zinc-binding in reverse transcriptase
RVT_3 PF13456 983 - 1038 3.4e-08 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0014800)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1896
AccB7I CCANNNNNTGG 1 cut(s) 2436
AccI GTMKAC 3 cut(s) 636, 755, 1721
AccIII TCCGGA 1 cut(s) 2254
AciI CCGC 2 cut(s) 2072, 2150
AclI AACGTT 1 cut(s) 1005
AclWI GGATC 2 cut(s) 602, 2940
AcuI CTGAAG 1 cut(s) 967
AcvI CACGTG 1 cut(s) 2375
AdeI CACNNNGTG 2 cut(s) 322, 3046
AfaI GTAC 6 cut(s) 470, 670, 1494, 1870, 2407, 2463
AfeI AGCGCT 2 cut(s) 422, 1087
AfiI CCNNNNNNNGG 5 cut(s) 250, 251, 1363, 1364, 2436
AgeI ACCGGT 2 cut(s) 1557, 2164
AjnI CCWGG 4 cut(s) 360, 1096, 1253, 2861
AleI CACNNNNGTG 1 cut(s) 2105
Alw26I GTCTC 5 cut(s) 39, 1574, 1939, 2372, 2412
AlwI GGATC 2 cut(s) 602, 2940
Ama87I CYCGRG 1 cut(s) 2457
Aor13HI TCCGGA 1 cut(s) 2254
Aor51HI AGCGCT 2 cut(s) 422, 1087
AoxI GGCC 2 cut(s) 161, 2057
ApeKI GCWGC 4 cut(s) 418, 1765, 3029, 3049
AsiGI ACCGGT 2 cut(s) 1557, 2164
Asp700I GAANNNNTTC 4 cut(s) 31, 152, 741, 1021
AspLEI GCGC 4 cut(s) 423, 1088, 2960, 3147
AspS9I GGNCC 3 cut(s) 358, 812, 2900
AsuC2I CCSGG 2 cut(s) 2270, 2466
AsuII TTCGAA 1 cut(s) 886
AsuNHI GCTAGC 1 cut(s) 2264
AvaI CYCGRG 1 cut(s) 2457
AvaII GGWCC 3 cut(s) 358, 812, 2900
AxyI CCTNAGG 2 cut(s) 726, 1746
BaeI ACNNNNGTAYC 2 cut(s) 1122, 1155
BarI GAAGNNNNNNTAC 2 cut(s) 377, 409
BauI CACGAG 1 cut(s) 2517
BbrPI CACGTG 1 cut(s) 2375
BbsI GAAGAC 1 cut(s) 1108
BbvI GCAGC 4 cut(s) 430, 1752, 3041, 3061
BccI CCATC 7 cut(s) 540, 812, 1641, 2032, 2090, 2948, 3095
BciT130I CCWGG 4 cut(s) 362, 1098, 1255, 2863
BciVI GTATCC 1 cut(s) 2124
BclI TGATCA 3 cut(s) 205, 1689, 2199
BcnI CCSGG 2 cut(s) 2270, 2466
BcoDI GTCTC 5 cut(s) 39, 1574, 1939, 2372, 2412
BfmI CTRYAG 2 cut(s) 612, 2232
BfoI RGCGCY 3 cut(s) 424, 1089, 2961
BfuI GTATCC 1 cut(s) 2124
BisI GCNGC 4 cut(s) 419, 1766, 3030, 3050
BlpI GCTNAGC 1 cut(s) 1628
BlsI GCNGC 4 cut(s) 420, 1767, 3031, 3051
BmcAI AGTACT 1 cut(s) 470
Bme1390I CCNGG 6 cut(s) 362, 1098, 1255, 2270, 2466, 2863
Bme18I GGWCC 3 cut(s) 358, 812, 2900
BmeT110I CYCGRG 1 cut(s) 2457
BmgT120I GGNCC 3 cut(s) 358, 812, 2900
BmiI GGNNCC 3 cut(s) 390, 813, 2901
BmrFI CCNGG 6 cut(s) 362, 1098, 1255, 2270, 2466, 2863
BmsI GCATC 7 cut(s) 780, 907, 961, 2493, 2669, 2722, 2819
BmtI GCTAGC 1 cut(s) 2268
BpiI GAAGAC 1 cut(s) 1108
BplI GAGNNNNNCTC 4 cut(s) 288, 320, 380, 412
BpmI CTGGAG 2 cut(s) 493, 1244
Bpu1102I GCTNAGC 1 cut(s) 1628
Bpu14I TTCGAA 1 cut(s) 886
BpuEI CTTGAG 2 cut(s) 485, 2395
BpuMI CCSGG 2 cut(s) 2270, 2466
BsaAI YACGTR 1 cut(s) 2375
BsaBI GATNNNNATC 1 cut(s) 2483
BsaI GGTCTC 2 cut(s) 1574, 2412
BsaWI WCCGGW 5 cut(s) 293, 814, 1557, 2164, 2254
BsaXI ACNNNNNCTCC 4 cut(s) 1829, 1859, 2077, 2107
Bsc4I CCNNNNNNNGG 5 cut(s) 250, 251, 1363, 1364, 2436
Bse118I RCCGGY 3 cut(s) 1557, 2059, 2164
Bse1I ACTGG 2 cut(s) 476, 2523
Bse21I CCTNAGG 2 cut(s) 726, 1746
Bse3DI GCAATG 4 cut(s) 876, 1911, 1987, 2715
Bse8I GATNNNNATC 1 cut(s) 2483
BseAI TCCGGA 1 cut(s) 2254
BseBI CCWGG 4 cut(s) 362, 1098, 1255, 2863
BseGI GGATG 8 cut(s) 222, 589, 823, 874, 922, 1353, 1652, 2959
BseJI GATNNNNATC 1 cut(s) 2483
BseLI CCNNNNNNNGG 5 cut(s) 250, 251, 1363, 1364, 2436
BseMI GCAATG 4 cut(s) 876, 1911, 1987, 2715
BseMII CTCAG 5 cut(s) 717, 1181, 1358, 1642, 2984
BseNI ACTGG 2 cut(s) 476, 2523
BseRI GAGGAG 4 cut(s) 200, 692, 2634, 3009
BseXI GCAGC 4 cut(s) 430, 1752, 3041, 3061
BseYI CCCAGC 1 cut(s) 911
BsgI GTGCAG 4 cut(s) 1751, 2495, 2622, 3068
BshFI GGCC 2 cut(s) 163, 2059
BshTI ACCGGT 2 cut(s) 1557, 2164
BsiHKCI CYCGRG 1 cut(s) 2457
BsiSI CCGG 9 cut(s) 294, 815, 1558, 2060, 2165, 2255, 2269, 2465, 2921
BslFI GGGAC 3 cut(s) 811, 825, 1458
BslI CCNNNNNNNGG 5 cut(s) 250, 251, 1363, 1364, 2436
BsmAI GTCTC 5 cut(s) 39, 1574, 1939, 2372, 2412
BsmBI CGTCTC 1 cut(s) 2372
BsmFI GGGAC 3 cut(s) 811, 825, 1458
BsmI GAATGC 2 cut(s) 781, 2557
BsnI GGCC 2 cut(s) 163, 2059
Bso31I GGTCTC 2 cut(s) 1574, 2412
BsoBI CYCGRG 1 cut(s) 2457
Bsp119I TTCGAA 1 cut(s) 886
Bsp13I TCCGGA 1 cut(s) 2254
Bsp143I GATC 6 cut(s) 205, 607, 1689, 2199, 2308, 2932
Bsp1720I GCTNAGC 1 cut(s) 1628
BspACI CCGC 2 cut(s) 2072, 2150
BspANI GGCC 2 cut(s) 163, 2059
BspCNI CTCAG 5 cut(s) 718, 1180, 1357, 1641, 2983
BspEI TCCGGA 1 cut(s) 2254
BspLI GGNNCC 3 cut(s) 390, 813, 2901
BspOI GCTAGC 1 cut(s) 2268
BspPI GGATC 2 cut(s) 602, 2940
BspQI GCTCTTC 1 cut(s) 408
BspT104I TTCGAA 1 cut(s) 886
BspTNI GGTCTC 2 cut(s) 1574, 2412
BsrDI GCAATG 4 cut(s) 876, 1911, 1987, 2715
BsrFI RCCGGY 3 cut(s) 1557, 2059, 2164
BsrI ACTGG 2 cut(s) 476, 2523
BssAI RCCGGY 3 cut(s) 1557, 2059, 2164
BssMI GATC 6 cut(s) 205, 607, 1689, 2199, 2308, 2932
BssNAI GTATAC 2 cut(s) 756, 1722
BssSI CACGAG 1 cut(s) 2517
Bst1107I GTATAC 2 cut(s) 756, 1722
Bst2BI CACGAG 1 cut(s) 2517
Bst2UI CCWGG 4 cut(s) 362, 1098, 1255, 2863
Bst4CI ACNGT 8 cut(s) 1733, 2236, 2350, 2383, 2780, 2881, 3046, 3072
Bst6I CTCTTC 3 cut(s) 408, 788, 2831
BstAPI GCANNNNNTGC 3 cut(s) 424, 1910, 3035
BstBAI YACGTR 1 cut(s) 2375
BstBI TTCGAA 1 cut(s) 886
BstDEI CTNAG 9 cut(s) 440, 726, 1167, 1344, 1628, 1664, 1746, 2970, 3111
BstF5I GGATG 8 cut(s) 222, 589, 823, 874, 922, 1353, 1652, 2959
BstH2I RGCGCY 3 cut(s) 424, 1089, 2961
BstHHI GCGC 4 cut(s) 423, 1088, 2960, 3147
BstKTI GATC 6 cut(s) 208, 610, 1692, 2202, 2311, 2935
BstMAI GTCTC 5 cut(s) 39, 1574, 1939, 2372, 2412
BstMBI GATC 6 cut(s) 205, 607, 1689, 2199, 2308, 2932
BstNI CCWGG 4 cut(s) 362, 1098, 1255, 2863
BstNSI RCATGY 5 cut(s) 692, 826, 1244, 2821, 3056
BstSCI CCNGG 6 cut(s) 360, 1096, 1253, 2268, 2464, 2861
BstSFI CTRYAG 2 cut(s) 612, 2232
BstV1I GCAGC 4 cut(s) 430, 1752, 3041, 3061
BstV2I GAAGAC 1 cut(s) 1108
BstZ17I GTATAC 2 cut(s) 756, 1722
Bsu36I CCTNAGG 2 cut(s) 726, 1746
BsuI GTATCC 1 cut(s) 2124
BsuRI GGCC 2 cut(s) 163, 2059
BtsCI GGATG 8 cut(s) 222, 589, 823, 874, 922, 1353, 1652, 2959
BtsI GCAGTG 1 cut(s) 239
BtsIMutI CAGTG 1 cut(s) 239
CfoI GCGC 4 cut(s) 423, 1088, 2960, 3147
Cfr10I RCCGGY 3 cut(s) 1557, 2059, 2164
Cfr13I GGNCC 3 cut(s) 358, 812, 2900
CseI GACGC 1 cut(s) 1428
CsiI ACCWGGT 1 cut(s) 1253
Csp6I GTAC 6 cut(s) 469, 669, 1493, 1869, 2406, 2462
CspAI ACCGGT 2 cut(s) 1557, 2164
CspCI CAANNNNNGTGG 2 cut(s) 2585, 2620
CviQI GTAC 6 cut(s) 469, 669, 1493, 1869, 2406, 2462
DdeI CTNAG 9 cut(s) 440, 726, 1167, 1344, 1628, 1664, 1746, 2970, 3111
DpnI GATC 6 cut(s) 207, 609, 1691, 2201, 2310, 2934
DpnII GATC 6 cut(s) 205, 607, 1689, 2199, 2308, 2932
DraI TTTAAA 1 cut(s) 2686
DraIII CACNNNGTG 2 cut(s) 322, 3046
Eam1104I CTCTTC 3 cut(s) 408, 788, 2831
EarI CTCTTC 3 cut(s) 408, 788, 2831
Eco147I AGGCCT 1 cut(s) 163
Eco31I GGTCTC 2 cut(s) 1574, 2412
Eco32I GATATC 1 cut(s) 1201
Eco47I GGWCC 3 cut(s) 358, 812, 2900
Eco47III AGCGCT 2 cut(s) 422, 1087
Eco57I CTGAAG 1 cut(s) 967
Eco72I CACGTG 1 cut(s) 2375
Eco81I CCTNAGG 2 cut(s) 726, 1746
Eco88I CYCGRG 1 cut(s) 2457
EcoRI GAATTC 1 cut(s) 2849
EcoRII CCWGG 4 cut(s) 360, 1096, 1253, 2861
EcoRV GATATC 1 cut(s) 1201
EcoT22I ATGCAT 2 cut(s) 2052, 2715
Esp3I CGTCTC 1 cut(s) 2372
FalI AAGNNNNNCTT 6 cut(s) 32, 64, 638, 670, 729, 761
FaqI GGGAC 3 cut(s) 811, 825, 1458
FauI CCCGC 1 cut(s) 2065
FauNDI CATATG 1 cut(s) 1213
FbaI TGATCA 3 cut(s) 205, 1689, 2199
FblI GTMKAC 3 cut(s) 636, 755, 1721
Fnu4HI GCNGC 4 cut(s) 419, 1766, 3030, 3050
FokI GGATG 8 cut(s) 209, 596, 830, 881, 929, 1340, 1659, 2966
Fsp4HI GCNGC 4 cut(s) 419, 1766, 3030, 3050
GlaI GCGC 4 cut(s) 422, 1087, 2959, 3146
GluI GCNGC 4 cut(s) 419, 1766, 3030, 3050
GsaI CCCAGC 1 cut(s) 915
GsuI CTGGAG 2 cut(s) 493, 1244
HaeII RGCGCY 3 cut(s) 424, 1089, 2961
HaeIII GGCC 2 cut(s) 163, 2059
HapII CCGG 9 cut(s) 294, 815, 1558, 2060, 2165, 2255, 2269, 2465, 2921
HgaI GACGC 1 cut(s) 1428
HhaI GCGC 4 cut(s) 423, 1088, 2960, 3147
Hin6I GCGC 4 cut(s) 421, 1086, 2958, 3145
HinP1I GCGC 4 cut(s) 421, 1086, 2958, 3145
HincII GTYRAC 2 cut(s) 1251, 2783
HindII GTYRAC 2 cut(s) 1251, 2783
HindIII AAGCTT 2 cut(s) 1157, 1193
HpaI GTTAAC 1 cut(s) 1251
HpaII CCGG 9 cut(s) 294, 815, 1558, 2060, 2165, 2255, 2269, 2465, 2921
Hpy166II GTNNAC 7 cut(s) 70, 637, 756, 1251, 1722, 2757, 2783
Hpy188I TCNGA 9 cut(s) 537, 561, 607, 986, 1114, 1347, 1689, 2973, 3076
Hpy8I GTNNAC 7 cut(s) 70, 637, 756, 1251, 1722, 2757, 2783
Hpy99I CGWCG 2 cut(s) 1444, 3159
HpyAV CCTTC 9 cut(s) 317, 379, 752, 807, 1169, 1856, 2485, 2682, 3088
HpyCH4III ACNGT 8 cut(s) 1733, 2236, 2350, 2383, 2780, 2881, 3046, 3072
HpyCH4IV ACGT 4 cut(s) 172, 752, 1005, 2374
HpyF3I CTNAG 9 cut(s) 440, 726, 1167, 1344, 1628, 1664, 1746, 2970, 3111
HpySE526I ACGT 4 cut(s) 172, 752, 1005, 2374
HspAI GCGC 4 cut(s) 421, 1086, 2958, 3145
Kpn2I TCCGGA 1 cut(s) 2254
Ksp22I TGATCA 3 cut(s) 205, 1689, 2199
KspAI GTTAAC 1 cut(s) 1251
Kzo9I GATC 6 cut(s) 205, 607, 1689, 2199, 2308, 2932
LguI GCTCTTC 1 cut(s) 408
LmnI GCTCC 4 cut(s) 309, 388, 1230, 3076
Lsp1109I GCAGC 4 cut(s) 430, 1752, 3041, 3061
LweI GCATC 7 cut(s) 780, 907, 961, 2493, 2669, 2722, 2819
MabI ACCWGGT 1 cut(s) 1253
MaeII ACGT 4 cut(s) 172, 752, 1005, 2374
MaeIII GTNAC 9 cut(s) 237, 254, 718, 2015, 2192, 2299, 2508, 2797, 3005
MalI GATC 6 cut(s) 207, 609, 1691, 2201, 2310, 2934
MboI GATC 6 cut(s) 205, 607, 1689, 2199, 2308, 2932
MfeI CAATTG 3 cut(s) 1772, 2317, 2557
MlyI GAGTC 6 cut(s) 1098, 1940, 2012, 2332, 2509, 3002
MmeI TCCRAC 4 cut(s) 1904, 2136, 2201, 3054
Mph1103I ATGCAT 2 cut(s) 2052, 2715
MroI TCCGGA 1 cut(s) 2254
MroXI GAANNNNTTC 4 cut(s) 31, 152, 741, 1021
MslI CAYNNNNRTG 3 cut(s) 201, 937, 2105
MspA1I CMGCKG 1 cut(s) 2152
MspI CCGG 9 cut(s) 294, 815, 1558, 2060, 2165, 2255, 2269, 2465, 2921
MspR9I CCNGG 6 cut(s) 362, 1098, 1255, 2270, 2466, 2863
MunI CAATTG 3 cut(s) 1772, 2317, 2557
Mva1269I GAATGC 2 cut(s) 781, 2557
MvaI CCWGG 4 cut(s) 362, 1098, 1255, 2863
NciI CCSGG 2 cut(s) 2270, 2466
NdeI CATATG 1 cut(s) 1213
NdeII GATC 6 cut(s) 205, 607, 1689, 2199, 2308, 2932
NheI GCTAGC 1 cut(s) 2264
NlaIV GGNNCC 3 cut(s) 390, 813, 2901
NmuCI GTSAC 5 cut(s) 237, 2015, 2192, 2299, 3005
NsiI ATGCAT 2 cut(s) 2052, 2715
NspI RCATGY 5 cut(s) 692, 826, 1244, 2821, 3056
NspV TTCGAA 1 cut(s) 886
OliI CACNNNNGTG 1 cut(s) 2105
PacI TTAATTAA 1 cut(s) 3132
PaeI GCATGC 2 cut(s) 1244, 2821
PaeR7I CTCGAG 1 cut(s) 2457
PceI AGGCCT 1 cut(s) 163
PciSI GCTCTTC 1 cut(s) 408
PctI GAATGC 2 cut(s) 781, 2557
PdmI GAANNNNTTC 4 cut(s) 31, 152, 741, 1021
PfeI GAWTC 6 cut(s) 86, 1660, 1882, 2224, 2343, 3151
PflMI CCANNNNNTGG 1 cut(s) 2436
PfoI TCCNGGA 2 cut(s) 360, 1096
PinAI ACCGGT 2 cut(s) 1557, 2164
PkrI GCNGC 4 cut(s) 420, 1767, 3031, 3051
PleI GAGTC 6 cut(s) 1098, 1940, 2012, 2331, 2509, 3002
PmaCI CACGTG 1 cut(s) 2375
PmlI CACGTG 1 cut(s) 2375
PpsI GAGTC 6 cut(s) 1098, 1940, 2012, 2331, 2509, 3002
Ppu21I YACGTR 1 cut(s) 2375
PsiI TTATAA 1 cut(s) 1896
Psp1406I AACGTT 1 cut(s) 1005
Psp6I CCWGG 4 cut(s) 360, 1096, 1253, 2861
PspCI CACGTG 1 cut(s) 2375
PspFI CCCAGC 1 cut(s) 911
PspGI CCWGG 4 cut(s) 360, 1096, 1253, 2861
PspN4I GGNNCC 3 cut(s) 390, 813, 2901
PspPI GGNCC 3 cut(s) 358, 812, 2900
PspXI VCTCGAGB 1 cut(s) 2457
RsaI GTAC 6 cut(s) 470, 670, 1494, 1870, 2407, 2463
RsaNI GTAC 6 cut(s) 469, 669, 1493, 1869, 2406, 2462
RseI CAYNNNNRTG 3 cut(s) 201, 937, 2105
SapI GCTCTTC 1 cut(s) 408
SatI GCNGC 4 cut(s) 419, 1766, 3030, 3050
Sau3AI GATC 6 cut(s) 205, 607, 1689, 2199, 2308, 2932
Sau96I GGNCC 3 cut(s) 358, 812, 2900
ScaI AGTACT 1 cut(s) 470
SchI GAGTC 6 cut(s) 1098, 1940, 2012, 2332, 2509, 3002
ScrFI CCNGG 6 cut(s) 362, 1098, 1255, 2270, 2466, 2863
SexAI ACCWGGT 1 cut(s) 1253
SfaNI GCATC 7 cut(s) 780, 907, 961, 2493, 2669, 2722, 2819
SfcI CTRYAG 2 cut(s) 612, 2232
Sfr274I CTCGAG 1 cut(s) 2457
SfuI TTCGAA 1 cut(s) 886
SinI GGWCC 3 cut(s) 358, 812, 2900
SlaI CTCGAG 1 cut(s) 2457
SmiMI CAYNNNNRTG 3 cut(s) 201, 937, 2105
SmlI CTYRAG 3 cut(s) 500, 2410, 2457
SmoI CTYRAG 3 cut(s) 500, 2410, 2457
SphI GCATGC 2 cut(s) 1244, 2821
SseBI AGGCCT 1 cut(s) 163
SsiI CCGC 2 cut(s) 2072, 2150
SspI AATATT 1 cut(s) 848
StuI AGGCCT 1 cut(s) 163
StyD4I CCNGG 6 cut(s) 360, 1096, 1253, 2268, 2464, 2861
TaaI ACNGT 8 cut(s) 1733, 2236, 2350, 2383, 2780, 2881, 3046, 3072
TaiI ACGT 4 cut(s) 175, 755, 1008, 2377
TaqI TCGA 5 cut(s) 25, 99, 129, 886, 2458
TaqII GACCGA 1 cut(s) 2873
TatI WGTACW 2 cut(s) 468, 668
TfiI GAWTC 6 cut(s) 86, 1660, 1882, 2224, 2343, 3151
TscAI CASTG 1 cut(s) 239
TseFI GTSAC 5 cut(s) 237, 2015, 2192, 2299, 3005
TseI GCWGC 4 cut(s) 418, 1765, 3029, 3049
Tsp45I GTSAC 5 cut(s) 237, 2015, 2192, 2299, 3005
TspGWI ACGGA 3 cut(s) 522, 1148, 1448
TspRI CASTG 1 cut(s) 239
Van91I CCANNNNNTGG 1 cut(s) 2436
VpaK11BI GGWCC 3 cut(s) 358, 812, 2900
XbaI TCTAGA 2 cut(s) 895, 1528
XceI RCATGY 5 cut(s) 692, 826, 1244, 2821, 3056
XcmI CCANNNNNNNNNTGG 2 cut(s) 2031, 2910
XhoI CTCGAG 1 cut(s) 2457
XmiI GTMKAC 3 cut(s) 636, 755, 1721
XmnI GAANNNNTTC 4 cut(s) 31, 152, 741, 1021
ZrmI AGTACT 1 cut(s) 470
Zsp2I ATGCAT 2 cut(s) 2052, 2715
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.