MD08G1088700.v1.1

ARM-repeat Tetratricopeptide repeat (TPR)-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
OG0014532
Physical Location & Seq
Reverse (-)
7320617 .. 7322911
2295 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1088700.v1.1.491

Sequence Viewer

Length: 1899 bp
ATGGATTACCTGAAGAAAAAGGAGAAGAAAACCTTGCCCACCAATGTTACAAAGGAACAGGCTTGCACTCGACCGTTTTGCTTCTTCTGCACCATGAAAGAGCCAAACTCCTTCAAGAGAAGAGCTGGTATATCAGCCTGTTTTAAGGAACTACCTCTCAGAGAAGACCAAGGAAATGTTCTGGTGCTGAGCAGCCTATGGAATGTTGCTATGGCTCACCCTGACGACCCGGAGTTCCCATCCCTTGGAATCTTTGATTGCATGGCAAGGTTTATCCACAAAGGCATCAACAATAAGAGTACTAGTTGGATTCAGAGGGACCAAAACATCTTCATCCCTTACTATGCAGCTCATGTCATTGGTTCTTATACCATGAACAAGGCTGCGTTTGCCGAAAAGGCGGTGGCATCGGGCGTGATTCCACCACTTTTGGAGCTTCTGAGAGGGAAGATGAGTTGGGTCGAGCAAAGGGTCGCGGTCCGAGCGCTAGGTCACCTTGCAAGCTACGAGAGGACATTCGAAGCTGTGGCGGAATACGAAGAAGAGGTGGTGAATTTGGCCATAAAGTTAGCCTCTACATGTCTTGATGTGGTGTATGTTAGTTTTGTCGGGGTGAAGGATGAGATAAAAAGACAGAAATATCACTGTAATTTGCTCACAAGAGGTGTTGGGGGATTTGAAATGGAGAATTGCAAGGCTGAGGAATGGGCTAGTCAGCTTCAGTGTTGGTCTCTCTATATCTTAAATTGTTTTGCTTGCAAAGAGAGGTCTTTGAACCTCATTTGCAAGGGGAACTTTTTGAAAGAGTTGTGTGGAATGTGGGGTGGATTGGCAAATCACTCATCGCCAGCTGGGATTGGACTTGTTAGGATTTTGTGCTATAGTAAATATGGAAGGAAAAAAATTGCTGAATCAAAGGTAGTTATTGAGAGCCTGTGTAATCTCTCAAGGTCTTCAGATGACTGGCAGTACATGGGAATCGACTGCCTCTTGTTGCTTCTCAAAGACCCCAATACGAGGTATAAAGTTATCGATATGGCCGCCTTGTTTCTTGTCGATTTGGTTGAGCTCAAAAGCCTTGGAGATAGATCAAACTTAGGTGAGGCAATCACAAAAGCACTTCTTCTGAACGAGTTGAACAAGAACAGAAGAATTGAAAAATGTTTGGAAGAGGTTTGGAATTTGAAGGTACAGAGGAGGAAGAAGGAGAGACTGTTGTCTGAAGAAAAAATTGAGGAAAGTAGGGTTTTGGTGGATTTAATGAAACAAGAAGCAAATCATATGTTTTGTATAGGAGAAATAGAGGAAGCTATAAAGAAGTATTCTGAAGCATTAAAAATGTGCCCATTAGGGTTGAGAAAAGAAAGAATGGTGCTCTATAGCAATAGAGCTCAGTGTGAATTGCTGATCGGAGACGCAGATGCCGCCATTAGAGACTCGACAAGAGCTCTCTGCTTGTCGAGTCCAGTGAATTCTCACAGCAAAAGTCTTTGGAGGAGATCACAGGCATATGACATGAAAGGGTTGGCCAAGGAAAGCATGATGGACTGTTTGATGTTCATCAATGGGTGCATCAAGTCTGAGAGTAGCAAACGTGTGAAGGTTCCATACTATGCAGCACGTATGATCAGCAAACAGATGGACGCCACGTGGCTTTTTGCCACTGCCAGGTCAAAGATGGCAACTGTCGATGATCAAGACTTTCAAGAGATTAAAGAAGTACAAAAGTCAGAAAGTAGGGTTAACTTACACGAGAGTAGCAGTGACAAGCAAGATTACCATGATGAAATGATGAGAATTGTGATGCAGAAGAAAGGTCTGTCCACCATTTTTGAAGAACCTTTAACTCAATTAAAGGAAGAGAGTTGGAGAACGATGGAAAGGACGAAAACGATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

633

Amino Acids

72.36

Weight (kDa)

8.69

Isoelectric Point (pI)

50.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARM_7 PF26524 20 - 263 1.8e-128 Plant ARM repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014532)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G43120 AT5G43120
fragaria_vesca FvH4_2g33380
malus_domestica MD08G1088700.v1.1 MD15G1073700.v1.1
prunus_persica Prupe.1G426500_v2.0.a1
pyrus_communis pycom08g07210
rosa_chinensis RchiOBHm_Chr6g0309161
rosa_laevigata RLG00000010585
rosa_multiflora Rmu_sc0020102.1_g000005
rosa_roxburghii Rroxscaffold_7G00159600
rosa_rugosa Rorug06G0370100
rosa_samantha Rh6AG483000 Rh6BG492100 Rh6CG496800 Rh6DG483700
rosa_wichuraiana Rw6G042060

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 245
AccII CGCG 1 cut(s) 476
AciI CCGC 5 cut(s) 401, 476, 530, 1041, 1425
AcoI YGGCCR 3 cut(s) 558, 1038, 1527
AcsI RAATTY 3 cut(s) 553, 1180, 1471
AcuI CTGAAG 5 cut(s) 32, 704, 939, 1242, 1347
AcvI CACGTG 1 cut(s) 1650
AcyI GRCGYC 1 cut(s) 1644
AfaI GTAC 4 cut(s) 301, 971, 1191, 1722
AfeI AGCGCT 1 cut(s) 486
AfiI CCNNNNNNNGG 3 cut(s) 245, 1017, 1668
AflIII ACRYGT 2 cut(s) 578, 1594
AgsI TTSAA 9 cut(s) 115, 680, 775, 802, 1138, 1157, 1186, 1706, 1835
AhlI ACTAGT 1 cut(s) 302
AjnI CCWGG 1 cut(s) 1667
AjuI GAANNNNNNNTTGG 2 cut(s) 162, 194
Alw21I GWGCWC 4 cut(s) 1071, 1377, 1393, 1450
Alw26I GTCTC 4 cut(s) 735, 1204, 1407, 1428
Aor51HI AGCGCT 1 cut(s) 486
AoxI GGCC 3 cut(s) 558, 1038, 1527
ApeKI GCWGC 4 cut(s) 192, 347, 383, 1616
ApoI RAATTY 3 cut(s) 553, 1180, 1471
AspLEI GCGC 1 cut(s) 487
AspS9I GGNCC 2 cut(s) 319, 478
AsuC2I CCSGG 1 cut(s) 230
AsuHPI GGTGA 5 cut(s) 209, 485, 562, 625, 1112
AsuII TTCGAA 1 cut(s) 519
AvaII GGWCC 2 cut(s) 319, 478
BaeGI GKGCMC 1 cut(s) 1346
BalI TGGCCA 2 cut(s) 560, 1529
BanII GRGCYC 3 cut(s) 1071, 1393, 1450
BarI GAAGNNNNNNTAC 2 cut(s) 1592, 1624
BauI CACGAG 1 cut(s) 1751
BbrPI CACGTG 1 cut(s) 1650
BbsI GAAGAC 2 cut(s) 171, 945
Bbv12I GWGCWC 4 cut(s) 1071, 1377, 1393, 1450
BbvCI CCTCAGC 1 cut(s) 699
BbvI GCAGC 4 cut(s) 204, 359, 370, 1628
BccI CCATC 5 cut(s) 247, 1537, 1633, 1672, 1870
BcgI CGANNNNNNTGC 2 cut(s) 60, 94
BciT130I CCWGG 1 cut(s) 1669
BclI TGATCA 2 cut(s) 1626, 1693
BcnI CCSGG 1 cut(s) 230
BcoDI GTCTC 4 cut(s) 735, 1204, 1407, 1428
BcuI ACTAGT 1 cut(s) 302
BfaI CTAG 3 cut(s) 303, 488, 711
BfmI CTRYAG 2 cut(s) 880, 1378
BfoI RGCGCY 1 cut(s) 488
BglI GCCNNNNNGGC 1 cut(s) 398
BisI GCNGC 6 cut(s) 193, 348, 384, 1041, 1425, 1617
BlpI GCTNAGC 1 cut(s) 188
BlsI GCNGC 6 cut(s) 194, 349, 385, 1042, 1426, 1618
BmcAI AGTACT 1 cut(s) 301
Bme1390I CCNGG 2 cut(s) 230, 1669
Bme18I GGWCC 2 cut(s) 319, 478
BmgT120I GGNCC 2 cut(s) 319, 478
BmiI GGNNCC 2 cut(s) 320, 1605
BmrFI CCNGG 2 cut(s) 230, 1669
BmsI GCATC 5 cut(s) 294, 416, 1411, 1581, 1794
BoxI GACNNNNGTC 1 cut(s) 1216
BpiI GAAGAC 2 cut(s) 171, 945
BplI GAGNNNNNCTC 2 cut(s) 92, 124
Bpu10I CCTNAGC 1 cut(s) 699
Bpu1102I GCTNAGC 1 cut(s) 188
Bpu14I TTCGAA 1 cut(s) 519
BpuEI CTTGAG 1 cut(s) 931
BpuMI CCSGG 1 cut(s) 230
Bsa29I ATCGAT 1 cut(s) 1032
BsaAI YACGTR 2 cut(s) 1622, 1650
BsaBI GATNNNNATC 1 cut(s) 1559
BsaHI GRCGYC 1 cut(s) 1644
BsaI GGTCTC 1 cut(s) 735
BsaJI CCNNGG 4 cut(s) 169, 244, 1078, 1530
BsaXI ACNNNNNCTCC 2 cut(s) 1199, 1229
Bsc4I CCNNNNNNNGG 3 cut(s) 245, 1017, 1668
Bse1I ACTGG 2 cut(s) 968, 1466
Bse8I GATNNNNATC 1 cut(s) 1559
BseBI CCWGG 1 cut(s) 1669
BseCI ATCGAT 1 cut(s) 1032
BseDI CCNNGG 4 cut(s) 169, 244, 1078, 1530
BseGI GGATG 3 cut(s) 239, 333, 625
BseJI GATNNNNATC 1 cut(s) 1559
BseLI CCNNNNNNNGG 3 cut(s) 245, 1017, 1668
BseMII CTCAG 6 cut(s) 172, 179, 431, 690, 1406, 1572
BseNI ACTGG 2 cut(s) 968, 1466
BseRI GAGGAG 2 cut(s) 1210, 1510
BseSI GKGCMC 1 cut(s) 1346
BseXI GCAGC 4 cut(s) 204, 359, 370, 1628
BseYI CCCAGC 1 cut(s) 851
BsgI GTGCAG 1 cut(s) 73
Bsh1236I CGCG 1 cut(s) 476
Bsh1285I CGRYCG 1 cut(s) 74
BshFI GGCC 3 cut(s) 560, 1040, 1529
BshVI ATCGAT 1 cut(s) 1032
BsiEI CGRYCG 1 cut(s) 74
BsiHKAI GWGCWC 4 cut(s) 1071, 1377, 1393, 1450
BsiSI CCGG 1 cut(s) 230
BslFI GGGAC 1 cut(s) 332
BslI CCNNNNNNNGG 3 cut(s) 245, 1017, 1668
BsmAI GTCTC 4 cut(s) 735, 1204, 1407, 1428
BsmBI CGTCTC 1 cut(s) 1407
BsmFI GGGAC 1 cut(s) 332
BsnI GGCC 3 cut(s) 560, 1040, 1529
Bso31I GGTCTC 1 cut(s) 735
Bsp119I TTCGAA 1 cut(s) 519
Bsp1286I GDGCHC 5 cut(s) 1071, 1346, 1377, 1393, 1450
Bsp143I GATC 5 cut(s) 1088, 1407, 1499, 1626, 1693
Bsp1720I GCTNAGC 1 cut(s) 188
BspACI CCGC 5 cut(s) 401, 476, 530, 1041, 1425
BspANI GGCC 3 cut(s) 560, 1040, 1529
BspCNI CTCAG 6 cut(s) 171, 180, 432, 691, 1405, 1573
BspDI ATCGAT 1 cut(s) 1032
BspFNI CGCG 1 cut(s) 476
BspLI GGNNCC 2 cut(s) 320, 1605
BspQI GCTCTTC 1 cut(s) 115
BspT104I TTCGAA 1 cut(s) 519
BspTNI GGTCTC 1 cut(s) 735
BsrI ACTGG 2 cut(s) 968, 1466
BssECI CCNNGG 4 cut(s) 169, 244, 1078, 1530
BssMI GATC 5 cut(s) 1088, 1407, 1499, 1626, 1693
BssNI GRCGYC 1 cut(s) 1644
BssSI CACGAG 1 cut(s) 1751
BssT1I CCWWGG 4 cut(s) 169, 244, 1078, 1530
Bst2BI CACGAG 1 cut(s) 1751
Bst2UI CCWGG 1 cut(s) 1669
Bst4CI ACNGT 5 cut(s) 75, 647, 1215, 1550, 1687
Bst6I CTCTTC 4 cut(s) 115, 537, 1164, 1854
BstACI GRCGYC 1 cut(s) 1644
BstBAI YACGTR 2 cut(s) 1622, 1650
BstBI TTCGAA 1 cut(s) 519
BstC8I GCNNGC 4 cut(s) 64, 502, 757, 849
BstDEI CTNAG 7 cut(s) 158, 188, 440, 699, 1096, 1392, 1581
BstEII GGTNACC 1 cut(s) 491
BstF5I GGATG 3 cut(s) 239, 333, 625
BstFNI CGCG 1 cut(s) 476
BstH2I RGCGCY 1 cut(s) 488
BstHHI GCGC 1 cut(s) 487
BstKTI GATC 5 cut(s) 1091, 1410, 1502, 1629, 1696
BstMAI GTCTC 4 cut(s) 735, 1204, 1407, 1428
BstMBI GATC 5 cut(s) 1088, 1407, 1499, 1626, 1693
BstMCI CGRYCG 1 cut(s) 74
BstMWI GCNNNNNNNGC 5 cut(s) 87, 389, 398, 482, 1424
BstNI CCWGG 1 cut(s) 1669
BstNSI RCATGY 1 cut(s) 582
BstPAI GACNNNNGTC 1 cut(s) 1216
BstPI GGTNACC 1 cut(s) 491
BstSCI CCNGG 2 cut(s) 228, 1667
BstSFI CTRYAG 2 cut(s) 880, 1378
BstSLI GKGCMC 1 cut(s) 1346
BstUI CGCG 1 cut(s) 476
BstV1I GCAGC 4 cut(s) 204, 359, 370, 1628
BstV2I GAAGAC 2 cut(s) 171, 945
Bsu15I ATCGAT 1 cut(s) 1032
BsuRI GGCC 3 cut(s) 560, 1040, 1529
BsuTUI ATCGAT 1 cut(s) 1032
BtgZI GCGATG 1 cut(s) 828
BtsCI GGATG 3 cut(s) 239, 333, 625
BtsI GCAGTG 2 cut(s) 1662, 1768
BtsIMutI CAGTG 6 cut(s) 643, 728, 1400, 1473, 1662, 1768
Cac8I GCNNGC 4 cut(s) 64, 502, 757, 849
CfoI GCGC 1 cut(s) 487
Cfr13I GGNCC 2 cut(s) 319, 478
ClaI ATCGAT 1 cut(s) 1032
CpoI CGGWCCG 1 cut(s) 478
CseI GACGC 2 cut(s) 1424, 1652
Csp6I GTAC 4 cut(s) 300, 970, 1190, 1721
CspCI CAANNNNNGTGG 4 cut(s) 411, 446, 1813, 1848
CspI CGGWCCG 1 cut(s) 478
CviAII CATG 9 cut(s) 94, 262, 353, 373, 579, 973, 1516, 1540, 1781
CviQI GTAC 4 cut(s) 300, 970, 1190, 1721
DdeI CTNAG 7 cut(s) 158, 188, 440, 699, 1096, 1392, 1581
DpnI GATC 5 cut(s) 1090, 1409, 1501, 1628, 1695
DpnII GATC 5 cut(s) 1088, 1407, 1499, 1626, 1693
EaeI YGGCCR 3 cut(s) 558, 1038, 1527
Eam1104I CTCTTC 4 cut(s) 115, 537, 1164, 1854
EarI CTCTTC 4 cut(s) 115, 537, 1164, 1854
EciI GGCGGA 1 cut(s) 545
Ecl136II GAGCTC 3 cut(s) 1069, 1391, 1448
Eco130I CCWWGG 4 cut(s) 169, 244, 1078, 1530
Eco24I GRGCYC 3 cut(s) 1071, 1393, 1450
Eco31I GGTCTC 1 cut(s) 735
Eco47I GGWCC 2 cut(s) 319, 478
Eco47III AGCGCT 1 cut(s) 486
Eco53kI GAGCTC 3 cut(s) 1069, 1391, 1448
Eco57I CTGAAG 5 cut(s) 32, 704, 939, 1242, 1347
Eco72I CACGTG 1 cut(s) 1650
Eco91I GGTNACC 1 cut(s) 491
EcoICRI GAGCTC 3 cut(s) 1069, 1391, 1448
EcoO65I GGTNACC 1 cut(s) 491
EcoRI GAATTC 1 cut(s) 1471
EcoRII CCWGG 1 cut(s) 1667
EcoT14I CCWWGG 4 cut(s) 169, 244, 1078, 1530
EcoT38I GRGCYC 3 cut(s) 1071, 1393, 1450
ErhI CCWWGG 4 cut(s) 169, 244, 1078, 1530
Esp3I CGTCTC 1 cut(s) 1407
FaeI CATG 9 cut(s) 97, 265, 356, 376, 582, 976, 1519, 1543, 1784
FalI AAGNNNNNCTT 6 cut(s) 17, 49, 779, 811, 1107, 1139
FaqI GGGAC 1 cut(s) 332
FatI CATG 9 cut(s) 93, 261, 352, 372, 578, 972, 1515, 1539, 1780
FauNDI CATATG 2 cut(s) 1281, 1510
FbaI TGATCA 2 cut(s) 1626, 1693
Fnu4HI GCNGC 6 cut(s) 193, 348, 384, 1041, 1425, 1617
FokI GGATG 3 cut(s) 226, 320, 632
FriOI GRGCYC 3 cut(s) 1071, 1393, 1450
Fsp4HI GCNGC 6 cut(s) 193, 348, 384, 1041, 1425, 1617
FspBI CTAG 3 cut(s) 303, 488, 711
GlaI GCGC 1 cut(s) 486
GluI GCNGC 6 cut(s) 193, 348, 384, 1041, 1425, 1617
GsaI CCCAGC 1 cut(s) 855
HaeII RGCGCY 1 cut(s) 488
HaeIII GGCC 3 cut(s) 560, 1040, 1529
HapII CCGG 1 cut(s) 230
HgaI GACGC 2 cut(s) 1424, 1652
HhaI GCGC 1 cut(s) 487
Hin1I GRCGYC 1 cut(s) 1644
Hin1II CATG 9 cut(s) 97, 265, 356, 376, 582, 976, 1519, 1543, 1784
Hin6I GCGC 1 cut(s) 485
HinP1I GCGC 1 cut(s) 485
HincII GTYRAC 1 cut(s) 1744
HindII GTYRAC 1 cut(s) 1744
HinfI GANTC 7 cut(s) 249, 310, 418, 911, 978, 1436, 1462
HpaI GTTAAC 1 cut(s) 1744
HpaII CCGG 1 cut(s) 230
HphI GGTGA 5 cut(s) 209, 485, 562, 625, 1112
Hpy166II GTNNAC 2 cut(s) 1744, 1824
Hpy188III TCNNGA 4 cut(s) 115, 584, 1697, 1706
Hpy8I GTNNAC 2 cut(s) 1744, 1824
HpyAV CCTTC 6 cut(s) 121, 610, 888, 1180, 1198, 1594
HpyCH4III ACNGT 5 cut(s) 75, 647, 1215, 1550, 1687
HpyCH4IV ACGT 3 cut(s) 1594, 1621, 1649
HpyF10VI GCNNNNNNNGC 5 cut(s) 87, 389, 398, 482, 1424
HpyF3I CTNAG 7 cut(s) 158, 188, 440, 699, 1096, 1392, 1581
HpySE526I ACGT 3 cut(s) 1594, 1621, 1649
Hsp92I GRCGYC 1 cut(s) 1644
Hsp92II CATG 9 cut(s) 97, 265, 356, 376, 582, 976, 1519, 1543, 1784
HspAI GCGC 1 cut(s) 485
Ksp22I TGATCA 2 cut(s) 1626, 1693
KspAI GTTAAC 1 cut(s) 1744
Kzo9I GATC 5 cut(s) 1088, 1407, 1499, 1626, 1693
LguI GCTCTTC 1 cut(s) 115
LmnI GCTCC 1 cut(s) 433
Lsp1109I GCAGC 4 cut(s) 204, 359, 370, 1628
LweI GCATC 5 cut(s) 294, 416, 1411, 1581, 1794
MaeI CTAG 3 cut(s) 303, 488, 711
MaeII ACGT 3 cut(s) 1594, 1621, 1649
MaeIII GTNAC 3 cut(s) 46, 491, 1763
MalI GATC 5 cut(s) 1090, 1409, 1501, 1628, 1695
MboI GATC 5 cut(s) 1088, 1407, 1499, 1626, 1693
MhlI GDGCHC 5 cut(s) 1071, 1346, 1377, 1393, 1450
MlsI TGGCCA 2 cut(s) 560, 1529
MluNI TGGCCA 2 cut(s) 560, 1529
MlyI GAGTC 2 cut(s) 1430, 1471
MmeI TCCRAC 2 cut(s) 287, 1847
Mox20I TGGCCA 2 cut(s) 560, 1529
MscI TGGCCA 2 cut(s) 560, 1529
MseI TTAA 8 cut(s) 144, 743, 1259, 1334, 1713, 1743, 1844, 1853
Msp20I TGGCCA 2 cut(s) 560, 1529
MspA1I CMGCKG 1 cut(s) 851
MspI CCGG 1 cut(s) 230
MspR9I CCNGG 2 cut(s) 230, 1669
MvaI CCWGG 1 cut(s) 1669
MvnI CGCG 1 cut(s) 476
MwoI GCNNNNNNNGC 5 cut(s) 87, 389, 398, 482, 1424
NciI CCSGG 1 cut(s) 230
NdeI CATATG 2 cut(s) 1281, 1510
NdeII GATC 5 cut(s) 1088, 1407, 1499, 1626, 1693
NlaIII CATG 9 cut(s) 97, 265, 356, 376, 582, 976, 1519, 1543, 1784
NlaIV GGNNCC 2 cut(s) 320, 1605
NmuCI GTSAC 2 cut(s) 491, 1763
NspI RCATGY 1 cut(s) 582
NspV TTCGAA 1 cut(s) 519
PciI ACATGT 1 cut(s) 578
PciSI GCTCTTC 1 cut(s) 115
PfeI GAWTC 5 cut(s) 249, 310, 418, 911, 978
PflMI CCANNNNNTGG 1 cut(s) 245
PkrI GCNGC 6 cut(s) 194, 349, 385, 1042, 1426, 1618
PleI GAGTC 2 cut(s) 1430, 1470
PmaCI CACGTG 1 cut(s) 1650
PmlI CACGTG 1 cut(s) 1650
PpsI GAGTC 2 cut(s) 1430, 1470
Ppu21I YACGTR 2 cut(s) 1622, 1650
PscI ACATGT 1 cut(s) 578
PshAI GACNNNNGTC 1 cut(s) 1216
Psp124BI GAGCTC 3 cut(s) 1071, 1393, 1450
Psp6I CCWGG 1 cut(s) 1667
PspCI CACGTG 1 cut(s) 1650
PspEI GGTNACC 1 cut(s) 491
PspFI CCCAGC 1 cut(s) 851
PspGI CCWGG 1 cut(s) 1667
PspN4I GGNNCC 2 cut(s) 320, 1605
PspPI GGNCC 2 cut(s) 319, 478
PvuII CAGCTG 1 cut(s) 851
RsaI GTAC 4 cut(s) 301, 971, 1191, 1722
RsaNI GTAC 4 cut(s) 300, 970, 1190, 1721
Rsr2I CGGWCCG 1 cut(s) 478
RsrII CGGWCCG 1 cut(s) 478
SacI GAGCTC 3 cut(s) 1071, 1393, 1450
SapI GCTCTTC 1 cut(s) 115
SaqAI TTAA 8 cut(s) 144, 743, 1259, 1334, 1713, 1743, 1844, 1853
SatI GCNGC 6 cut(s) 193, 348, 384, 1041, 1425, 1617
Sau3AI GATC 5 cut(s) 1088, 1407, 1499, 1626, 1693
Sau96I GGNCC 2 cut(s) 319, 478
ScaI AGTACT 1 cut(s) 301
SchI GAGTC 2 cut(s) 1430, 1471
ScrFI CCNGG 2 cut(s) 230, 1669
SduI GDGCHC 5 cut(s) 1071, 1346, 1377, 1393, 1450
SfaNI GCATC 5 cut(s) 294, 416, 1411, 1581, 1794
SfcI CTRYAG 2 cut(s) 880, 1378
SfuI TTCGAA 1 cut(s) 519
SinI GGWCC 2 cut(s) 319, 478
SmlI CTYRAG 1 cut(s) 946
SmoI CTYRAG 1 cut(s) 946
SpeI ACTAGT 1 cut(s) 302
SsiI CCGC 5 cut(s) 401, 476, 530, 1041, 1425
SspMI CTAG 3 cut(s) 303, 488, 711
SstI GAGCTC 3 cut(s) 1071, 1393, 1450
StyD4I CCNGG 2 cut(s) 228, 1667
StyI CCWWGG 4 cut(s) 169, 244, 1078, 1530
TaaI ACNGT 5 cut(s) 75, 647, 1215, 1550, 1687
TaiI ACGT 3 cut(s) 1597, 1624, 1652
TaqI TCGA 9 cut(s) 70, 462, 519, 981, 1032, 1056, 1439, 1460, 1689
TatI WGTACW 3 cut(s) 299, 969, 1720
TauI GCSGC 2 cut(s) 1043, 1427
TfiI GAWTC 5 cut(s) 249, 310, 418, 911, 978
Tru1I TTAA 8 cut(s) 144, 743, 1259, 1334, 1713, 1743, 1844, 1853
Tru9I TTAA 8 cut(s) 144, 743, 1259, 1334, 1713, 1743, 1844, 1853
TscAI CASTG 6 cut(s) 650, 728, 1400, 1473, 1669, 1768
TseFI GTSAC 2 cut(s) 491, 1763
TseI GCWGC 4 cut(s) 192, 347, 383, 1616
Tsp45I GTSAC 2 cut(s) 491, 1763
TspDTI ATGAA 7 cut(s) 110, 322, 389, 1277, 1532, 1549, 1800
TspRI CASTG 6 cut(s) 650, 728, 1400, 1473, 1669, 1768
Van91I CCANNNNNTGG 1 cut(s) 245
VpaK11BI GGWCC 2 cut(s) 319, 478
XapI RAATTY 3 cut(s) 553, 1180, 1471
XceI RCATGY 1 cut(s) 582
XcmI CCANNNNNNNNNTGG 1 cut(s) 1675
XspI CTAG 3 cut(s) 303, 488, 711
ZrmI AGTACT 1 cut(s) 301
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.