Rmu_sc0020102.1_g000005

ARM-repeat Tetratricopeptide repeat (TPR)-like protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0020102.1
Physical Location & Seq
Forward (+)
29103 .. 34154
5052 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0020102.1_g000005.1.cds

Sequence Viewer

Length: 2958 bp
atggactccatgaggaaaaaagagaaggaacatggtggttgcaccactcagttttgtttcttctgcgcaatgaaagaaccagattccttcaagaggagagccactctagcaacctgtttcaagcaaatgcctctcagagacgaccaagaaaatgttctggtgctgagcagcttatggcacattgctatgactcaccctgacgaccaagagttcccaaacctcggcatctttgagtgcatggcaagactaatccacaaaggtatcaaagatcagactagtcgttggctccaaaaacaccagaacatatacatcccttactacgcagctcacgtcatcggttcttacaccatgaaccgagtcgagttcgcaaaaatagctgccgagtcgggagtgattccgccgctgctcgagcttctgagagggaagatgagttgggtcgagcagcgggtggctgttcgagccctcgggcacctcgcgagctacgagaagactttcaagctcgttgcggattacgaagaggagatggtgaggttagccatggaactagcttctacatgtgttaatgtggtgtatgctagctttgtgggagtgaaggataagagcaaaagactaaaataccactgtgatttggtaacaagaggtattggaggtttagagatggagaactccaaggctgaggaatgggctagtcaactccagtgctggtctctatacatattaaattgctttgcttgcaaacaaaggcctctggctttgaaacttatttgcaagcaagagtttttgagagagttgtgtgggatgtggggtgggttattggctaaccaagcttctcctgctgggattggactcattagaattttgtgttacagtaaatatgggaggagaaaagtagctgaatcgaaagaggtcatagagcgcctgtgtaatttgtcgaggtcttcagatgattggcagtacatgggaattgattgccttttgcttcttctcaaagacgcagatacaaggtacaacgttattgatatttctgctttgtttctcattgatttggttgaacttagaagccttggagatcatagatcaaacttaggggaaacaatcgcaaaaacacttcttctcgattacaagcagagaaaatcaaacaagaacgaagctttagaagagctatggagtttaatagagaggagtaagaaagaaagagtcttgttgtccggagaaatatgggaagaaagaaaggttttggtggatttgataaaacaagaagcaaatcatctgttttgtgaaggggaagtagaggaagctctaattaagtactctgaggcattagctttgtgcccaataaggctgagaaaagagagaatggtactctatagcaatagagctcagtgtcaattgctgcttagggatccagattccgccattagagacaccactagagctctttgcttgtcaagtccagcaaactctcatgggaaaagtctgtggagaaggtcacaggcttatgacatgaaagggttgaccagagaaagcttgatggactgtgtcatgttcatcaatgggtgcatcaagtccgagaagagtagccagagggttaagattccgtactatgcagcacggatgatcagcaaacagatggacgctacatggattttcgccactgcccggtccaccatggctaccagtcaagtgaaaaaggtacaagaatcagaaggtaataagggtaacaatgaaggtggcaatcataatcagcaagaaaaccatgatgaaatgatgaagattctgatggagaacaaaggtaaatgtctgtccactattttagaagagcctttaatgcataatatgaaattaacagaaaatgacactgagagtgttgcgctagtgatcggtgtgacgggcatagtaggcaacagcctagctgagattcttccactcgcggacacgcccggcggtccatggaaggtgtacggtgttgcacgtcgtcggcgcccaaattggaatgctgaccatcccgttgactatatccagtgcgatatctcagacccagaagacaccaaaaccaagctctcccggttaatcgatgtcacacacatcttctacgtgacatggaccagtaaagccactgagattgagaattgcgaggccaatggtgctatgctccgcaacgtgctacgtgtcgttatcccagcggctccaaatctccaccacatcagcctccaaactggaaccaaacactatgttgggccgttcgaatctcttggtaagatccaagcccatgatccgcctttcacggaggagatgcctagacttgatgtgcccaatttctactacaccctagaggacatcctgttcgaagaggctaacaagaaagagggcctgacttggtcggtgcaccggcccaatcatatattcgggttttccccgtatagcttgatgaacataattggcgctctttgtgtttatgcttcaatatgtaagcacgaggggaaaccattgctatttccaggcagcaaagaagcttgggaatattacgcggtggcttcggatgcagatctgattgcggagcagcatatatgggccgcggtggatccaaatgccaaaaacgaagcctttaacatcaacaatggggatgtgtttaggtggaagaaactttggaaggtgttggctgaggaatttgggattgaggagtatggttttgaggagaagggtgagaagttgagcttggtggatgagatgaaggacaaaagtggtgtgtgggaagagatagtgaggaagaatcagctgcagcccaccaaattggaggaggttgcggtttggtggtttgctgaccttgttttgggtatgatgcccgtgttggacagtatgaataagagcaaagagcatggctttttggggttcaggaattccgaaaagtcattcgcatcgtggattgaaaaaatgaaagctcacaagattgtgccgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

985

Amino Acids

112.46

Weight (kDa)

6.72

Isoelectric Point (pI)

49.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014532)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G43120 AT5G43120
fragaria_vesca FvH4_2g33380
malus_domestica MD08G1088700.v1.1 MD15G1073700.v1.1
prunus_persica Prupe.1G426500_v2.0.a1
pyrus_communis pycom08g07210
rosa_chinensis RchiOBHm_Chr6g0309161
rosa_laevigata RLG00000010585
rosa_multiflora Rmu_sc0020102.1_g000005
rosa_roxburghii Rroxscaffold_7G00159600
rosa_rugosa Rorug06G0370100
rosa_samantha Rh6AG483000 Rh6BG492100 Rh6CG496800 Rh6DG483700
rosa_wichuraiana Rw6G042060

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 67
AccB1I GGYRCC 2 cut(s) 468, 1980
AccII CGCG 4 cut(s) 476, 1931, 2528, 2576
AccIII TCCGGA 1 cut(s) 1208
AclI AACGTT 1 cut(s) 1011
AclWI GGATC 6 cut(s) 1397, 1410, 2254, 2267, 2576, 2589
AcsI RAATTY 3 cut(s) 855, 2666, 2896
AcuI CTGAAG 1 cut(s) 924
AcyI GRCGYC 1 cut(s) 1981
AfaI GTAC 7 cut(s) 956, 1007, 1310, 1362, 1601, 1695, 1961
AfiI CCNNNNNNNGG 4 cut(s) 93, 221, 1659, 2830
AflIII ACRYGT 2 cut(s) 554, 2167
AgsI TTSAA 7 cut(s) 91, 121, 496, 757, 1052, 2463, 2927
AhlI ACTAGT 1 cut(s) 275
AjiI CACGTC 2 cut(s) 331, 1973
AjnI CCWGG 1 cut(s) 2497
AjuI GAANNNNNNNTTGG 6 cut(s) 138, 170, 2387, 2419, 2699, 2731
AloI GAACNNNNNNTCC 2 cut(s) 2327, 2359
Alw21I GWGCWC 3 cut(s) 1381, 1438, 2388
Alw26I GTCTC 3 cut(s) 132, 711, 1416
Alw44I GTGCAC 1 cut(s) 2384
AlwI GGATC 6 cut(s) 1397, 1410, 2254, 2267, 2576, 2589
Ama87I CYCGRG 2 cut(s) 407, 464
Aor13HI TCCGGA 1 cut(s) 1208
AoxI GGCC 6 cut(s) 743, 2136, 2237, 2368, 2390, 2571
ApaLI GTGCAC 1 cut(s) 2384
ApoI RAATTY 3 cut(s) 855, 2666, 2896
ArsI GACNNNNNNTTYG 2 cut(s) 2327, 2359
Asp700I GAANNNNTTC 2 cut(s) 153, 491
AspLEI GCGC 5 cut(s) 68, 918, 1873, 1983, 2444
AspS9I GGNCC 7 cut(s) 1662, 1946, 2103, 2237, 2368, 2391, 2571
AsuC2I CCSGG 3 cut(s) 1660, 1941, 2065
AsuHPI GGTGA 3 cut(s) 185, 538, 2714
AsuII TTCGAA 2 cut(s) 2244, 2346
AsuNHI GCTAGC 1 cut(s) 575
AvaI CYCGRG 2 cut(s) 407, 464
AvaII GGWCC 3 cut(s) 1662, 1946, 2103
BaeGI GKGCMC 4 cut(s) 471, 1334, 2313, 2388
BaeI ACNNNNGTAYC 2 cut(s) 244, 277
BamHI GGATCC 2 cut(s) 1402, 2581
BanI GGYRCC 2 cut(s) 468, 1980
BanII GRGCYC 3 cut(s) 463, 1381, 1438
BauI CACGAG 1 cut(s) 2474
BbsI GAAGAC 3 cut(s) 494, 930, 2049
Bbv12I GWGCWC 3 cut(s) 1381, 1438, 2388
BbvCI CCTCAGC 2 cut(s) 675, 2661
BccI CCATC 6 cut(s) 517, 652, 1525, 1624, 1774, 2010
BceAI ACGGC 2 cut(s) 2224, 2938
BciT130I CCWGG 1 cut(s) 2499
BclI TGATCA 1 cut(s) 1617
BcnI CCSGG 3 cut(s) 1660, 1941, 2065
BcoDI GTCTC 3 cut(s) 132, 711, 1416
BcuI ACTAGT 1 cut(s) 275
BfmI CTRYAG 2 cut(s) 1366, 2777
BfoI RGCGCY 3 cut(s) 919, 1984, 2445
BglII AGATCT 1 cut(s) 2545
BlpI GCTNAGC 1 cut(s) 164
BmcAI AGTACT 1 cut(s) 1310
Bme1390I CCNGG 4 cut(s) 1660, 1941, 2065, 2499
Bme18I GGWCC 3 cut(s) 1662, 1946, 2103
BmeT110I CYCGRG 2 cut(s) 407, 464
BmgBI CACGTC 2 cut(s) 331, 1973
BmgT120I GGNCC 7 cut(s) 1662, 1946, 2103, 2237, 2368, 2391, 2571
BmiI GGNNCC 7 cut(s) 287, 470, 1404, 1982, 2187, 2221, 2583
BmrFI CCNGG 4 cut(s) 1660, 1941, 2065, 2499
BmsI GCATC 6 cut(s) 234, 1569, 2283, 2530, 2829, 2924
BmtI GCTAGC 1 cut(s) 579
BpiI GAAGAC 3 cut(s) 494, 930, 2049
BplI GAGNNNNNCTC 2 cut(s) 88, 120
BpmI CTGGAG 1 cut(s) 680
Bpu10I CCTNAGC 3 cut(s) 675, 1397, 2661
Bpu1102I GCTNAGC 1 cut(s) 164
Bpu14I TTCGAA 2 cut(s) 2244, 2346
BpuMI CCSGG 3 cut(s) 1660, 1941, 2065
Bsa29I ATCGAT 1 cut(s) 2073
BsaAI YACGTR 2 cut(s) 2095, 2168
BsaBI GATNNNNATC 1 cut(s) 2544
BsaHI GRCGYC 1 cut(s) 1981
BsaI GGTCTC 1 cut(s) 711
BsaJI CCNNGG 8 cut(s) 220, 463, 537, 669, 1063, 1668, 1949, 2574
BsaWI WCCGGW 1 cut(s) 1208
Bsc4I CCNNNNNNNGG 4 cut(s) 93, 221, 1659, 2830
Bse118I RCCGGY 1 cut(s) 2388
Bse1I ACTGG 5 cut(s) 697, 1677, 2020, 2106, 2221
Bse3DI GCAATG 3 cut(s) 75, 180, 2486
Bse8I GATNNNNATC 1 cut(s) 2544
BseAI TCCGGA 1 cut(s) 1208
BseBI CCWGG 1 cut(s) 2499
BseCI ATCGAT 1 cut(s) 2073
BseDI CCNNGG 8 cut(s) 220, 463, 537, 669, 1063, 1668, 1949, 2574
BseGI GGATG 8 cut(s) 309, 804, 1620, 2002, 2337, 2545, 2629, 2728
BseJI GATNNNNATC 1 cut(s) 2544
BseLI CCNNNNNNNGG 4 cut(s) 93, 221, 1659, 2830
BseMI GCAATG 3 cut(s) 75, 180, 2486
BseNI ACTGG 5 cut(s) 697, 1677, 2020, 2106, 2221
BseRI GAGGAG 8 cut(s) 109, 533, 895, 1195, 2303, 2693, 2708, 2810
BseSI GKGCMC 4 cut(s) 471, 1334, 2313, 2388
BseYI CCCAGC 2 cut(s) 836, 2179
Bsh1236I CGCG 4 cut(s) 476, 1931, 2528, 2576
BshFI GGCC 6 cut(s) 745, 2138, 2239, 2370, 2392, 2573
BshNI GGYRCC 2 cut(s) 468, 1980
BshVI ATCGAT 1 cut(s) 2073
BsiHKAI GWGCWC 3 cut(s) 1381, 1438, 2388
BsiHKCI CYCGRG 2 cut(s) 407, 464
BsiSI CCGG 5 cut(s) 1209, 1660, 1941, 2065, 2389
BslI CCNNNNNNNGG 4 cut(s) 93, 221, 1659, 2830
BsmAI GTCTC 3 cut(s) 132, 711, 1416
BsmBI CGTCTC 1 cut(s) 132
BsmI GAATGC 1 cut(s) 1999
BsnI GGCC 6 cut(s) 745, 2138, 2239, 2370, 2392, 2573
Bso31I GGTCTC 1 cut(s) 711
BsoBI CYCGRG 2 cut(s) 407, 464
Bsp119I TTCGAA 2 cut(s) 2244, 2346
Bsp1286I GDGCHC 7 cut(s) 463, 471, 1334, 1381, 1438, 2313, 2388
Bsp13I TCCGGA 1 cut(s) 1208
Bsp1720I GCTNAGC 1 cut(s) 164
Bsp19I CCATGG 3 cut(s) 537, 1668, 1949
Bsp68I TCGCGA 1 cut(s) 476
BspANI GGCC 6 cut(s) 745, 2138, 2239, 2370, 2392, 2573
BspDI ATCGAT 1 cut(s) 2073
BspEI TCCGGA 1 cut(s) 1208
BspFNI CGCG 4 cut(s) 476, 1931, 2528, 2576
BspLI GGNNCC 7 cut(s) 287, 470, 1404, 1982, 2187, 2221, 2583
BspMAI CTGCAG 1 cut(s) 2781
BspOI GCTAGC 1 cut(s) 579
BspPI GGATC 6 cut(s) 1397, 1410, 2254, 2267, 2576, 2589
BspQI GCTCTTC 2 cut(s) 1152, 1812
BspT104I TTCGAA 2 cut(s) 2244, 2346
BspT107I GGYRCC 2 cut(s) 468, 1980
BspTNI GGTCTC 1 cut(s) 711
BsrDI GCAATG 3 cut(s) 75, 180, 2486
BsrFI RCCGGY 1 cut(s) 2388
BsrI ACTGG 5 cut(s) 697, 1677, 2020, 2106, 2221
BssAI RCCGGY 1 cut(s) 2388
BssECI CCNNGG 8 cut(s) 220, 463, 537, 669, 1063, 1668, 1949, 2574
BssNI GRCGYC 1 cut(s) 1981
BssSI CACGAG 1 cut(s) 2474
BssT1I CCWWGG 5 cut(s) 537, 669, 1063, 1668, 1949
Bst2BI CACGAG 1 cut(s) 2474
Bst2UI CCWGG 1 cut(s) 2499
Bst4CI ACNGT 5 cut(s) 623, 869, 1538, 1964, 2855
Bst6I CTCTTC 6 cut(s) 510, 1152, 1568, 1812, 2343, 2748
BstACI GRCGYC 1 cut(s) 1981
BstBAI YACGTR 2 cut(s) 2095, 2168
BstBI TTCGAA 2 cut(s) 2244, 2346
BstC8I GCNNGC 4 cut(s) 478, 577, 733, 770
BstDSI CCRYGG 4 cut(s) 537, 1668, 1949, 2574
BstENI CCTNNNNNAGG 1 cut(s) 91
BstF5I GGATG 8 cut(s) 309, 804, 1620, 2002, 2337, 2545, 2629, 2728
BstFNI CGCG 4 cut(s) 476, 1931, 2528, 2576
BstH2I RGCGCY 3 cut(s) 919, 1984, 2445
BstHHI GCGC 5 cut(s) 68, 918, 1873, 1983, 2444
BstMAI GTCTC 3 cut(s) 132, 711, 1416
BstNI CCWGG 1 cut(s) 2499
BstNSI RCATGY 1 cut(s) 558
BstSCI CCNGG 4 cut(s) 1658, 1939, 2063, 2497
BstSFI CTRYAG 2 cut(s) 1366, 2777
BstSLI GKGCMC 4 cut(s) 471, 1334, 2313, 2388
BstUI CGCG 4 cut(s) 476, 1931, 2528, 2576
BstV2I GAAGAC 3 cut(s) 494, 930, 2049
BstX2I RGATCY 4 cut(s) 1402, 2259, 2545, 2581
BstXI CCANNNNNNTGG 1 cut(s) 2791
BstYI RGATCY 4 cut(s) 1402, 2259, 2545, 2581
Bsu15I ATCGAT 1 cut(s) 2073
BsuRI GGCC 6 cut(s) 745, 2138, 2239, 2370, 2392, 2573
BsuTUI ATCGAT 1 cut(s) 2073
BtgI CCRYGG 4 cut(s) 537, 1668, 1949, 2574
BtrI CACGTC 2 cut(s) 331, 1973
BtsCI GGATG 8 cut(s) 309, 804, 1620, 2002, 2337, 2545, 2629, 2728
BtsI GCAGTG 1 cut(s) 1653
BtsIMutI CAGTG 7 cut(s) 619, 704, 1388, 1653, 1857, 2027, 2115
BtuMI TCGCGA 1 cut(s) 476
Cac8I GCNNGC 4 cut(s) 478, 577, 733, 770
CfoI GCGC 5 cut(s) 68, 918, 1873, 1983, 2444
Cfr10I RCCGGY 1 cut(s) 2388
Cfr13I GGNCC 7 cut(s) 1662, 1946, 2103, 2237, 2368, 2391, 2571
Cfr42I CCGCGG 1 cut(s) 2577
ClaI ATCGAT 1 cut(s) 2073
CseI GACGC 2 cut(s) 1001, 1643
Csp6I GTAC 7 cut(s) 955, 1006, 1309, 1361, 1600, 1694, 1960
CspCI CAANNNNNGTGG 4 cut(s) 1711, 1746, 2104, 2139
CviQI GTAC 7 cut(s) 955, 1006, 1309, 1361, 1600, 1694, 1960
DinI GGCGCC 1 cut(s) 1982
Eam1104I CTCTTC 6 cut(s) 510, 1152, 1568, 1812, 2343, 2748
EarI CTCTTC 6 cut(s) 510, 1152, 1568, 1812, 2343, 2748
EciI GGCGGA 3 cut(s) 387, 1402, 2265
Ecl136II GAGCTC 2 cut(s) 1379, 1436
Eco130I CCWWGG 5 cut(s) 537, 669, 1063, 1668, 1949
Eco147I AGGCCT 1 cut(s) 745
Eco24I GRGCYC 3 cut(s) 463, 1381, 1438
Eco31I GGTCTC 1 cut(s) 711
Eco32I GATATC 1 cut(s) 2029
Eco47I GGWCC 3 cut(s) 1662, 1946, 2103
Eco53kI GAGCTC 2 cut(s) 1379, 1436
Eco57I CTGAAG 1 cut(s) 924
Eco88I CYCGRG 2 cut(s) 407, 464
EcoICRI GAGCTC 2 cut(s) 1379, 1436
EcoNI CCTNNNNNAGG 1 cut(s) 91
EcoO109I RGGNCCY 1 cut(s) 2368
EcoRI GAATTC 1 cut(s) 2896
EcoRII CCWGG 1 cut(s) 2497
EcoRV GATATC 1 cut(s) 2029
EcoT14I CCWWGG 5 cut(s) 537, 669, 1063, 1668, 1949
EcoT22I ATGCAT 1 cut(s) 1833
EcoT38I GRGCYC 3 cut(s) 463, 1381, 1438
EgeI GGCGCC 1 cut(s) 1982
EheI GGCGCC 1 cut(s) 1982
ErhI CCWWGG 5 cut(s) 537, 669, 1063, 1668, 1949
Esp3I CGTCTC 1 cut(s) 132
FalI AAGNNNNNCTT 2 cut(s) 2699, 2731
FauI CCCGC 1 cut(s) 438
FbaI TGATCA 1 cut(s) 1617
FokI GGATG 8 cut(s) 296, 811, 1627, 1989, 2324, 2552, 2636, 2735
FriOI GRGCYC 3 cut(s) 463, 1381, 1438
FspI TGCGCA 1 cut(s) 67
GlaI GCGC 5 cut(s) 67, 917, 1872, 1982, 2443
GsaI CCCAGC 2 cut(s) 840, 2183
GsuI CTGGAG 1 cut(s) 680
HaeII RGCGCY 3 cut(s) 919, 1984, 2445
HaeIII GGCC 6 cut(s) 745, 2138, 2239, 2370, 2392, 2573
HapII CCGG 5 cut(s) 1209, 1660, 1941, 2065, 2389
HgaI GACGC 2 cut(s) 1001, 1643
HhaI GCGC 5 cut(s) 68, 918, 1873, 1983, 2444
Hin1I GRCGYC 1 cut(s) 1981
Hin6I GCGC 5 cut(s) 66, 916, 1871, 1981, 2442
HinP1I GCGC 5 cut(s) 66, 916, 1871, 1981, 2442
HincII GTYRAC 3 cut(s) 692, 1515, 2011
HindII GTYRAC 3 cut(s) 692, 1515, 2011
HindIII AAGCTT 4 cut(s) 825, 1149, 1525, 2511
HpaII CCGG 5 cut(s) 1209, 1660, 1941, 2065, 2389
HphI GGTGA 3 cut(s) 185, 538, 2714
Hpy166II GTNNAC 7 cut(s) 692, 1515, 1665, 1806, 1960, 2011, 2386
Hpy188III TCNNGA 7 cut(s) 91, 387, 475, 1115, 1209, 1406, 2893
Hpy8I GTNNAC 7 cut(s) 692, 1515, 1665, 1806, 1960, 2011, 2386
Hpy99I CGWCG 2 cut(s) 1977, 1980
HpyCH4III ACNGT 5 cut(s) 623, 869, 1538, 1964, 2855
HpyCH4IV ACGT 6 cut(s) 330, 1011, 1972, 2094, 2160, 2167
HpySE526I ACGT 6 cut(s) 330, 1011, 1972, 2094, 2160, 2167
Hsp92I GRCGYC 1 cut(s) 1981
HspAI GCGC 5 cut(s) 66, 916, 1871, 1981, 2442
KasI GGCGCC 1 cut(s) 1980
Kpn2I TCCGGA 1 cut(s) 1208
Ksp22I TGATCA 1 cut(s) 1617
KspI CCGCGG 1 cut(s) 2577
LguI GCTCTTC 2 cut(s) 1152, 1812
LmnI GCTCC 4 cut(s) 291, 2157, 2191, 2557
LweI GCATC 6 cut(s) 234, 1569, 2283, 2530, 2829, 2924
MaeII ACGT 6 cut(s) 330, 1011, 1972, 2094, 2160, 2167
MaeIII GTNAC 7 cut(s) 631, 863, 1488, 1718, 1885, 2077, 2095
MfeI CAATTG 1 cut(s) 1388
MflI RGATCY 4 cut(s) 1402, 2259, 2545, 2581
MhlI GDGCHC 7 cut(s) 463, 471, 1334, 1381, 1438, 2313, 2388
Mly113I GGCGCC 1 cut(s) 1981
MlyI GAGTC 5 cut(s) 184, 366, 392, 840, 1206
MmeI TCCRAC 1 cut(s) 2829
Mph1103I ATGCAT 1 cut(s) 1833
MroI TCCGGA 1 cut(s) 1208
MroXI GAANNNNTTC 2 cut(s) 153, 491
MseI TTAA 9 cut(s) 561, 719, 1172, 1305, 1590, 1826, 1844, 2069, 2607
MslI CAYNNNNRTG 1 cut(s) 185
MspA1I CMGCKG 5 cut(s) 403, 445, 2183, 2576, 2776
MspI CCGG 5 cut(s) 1209, 1660, 1941, 2065, 2389
MspR9I CCNGG 4 cut(s) 1660, 1941, 2065, 2499
MunI CAATTG 1 cut(s) 1388
Mva1269I GAATGC 1 cut(s) 1999
MvaI CCWGG 1 cut(s) 2499
MvnI CGCG 4 cut(s) 476, 1931, 2528, 2576
NarI GGCGCC 1 cut(s) 1981
NciI CCSGG 3 cut(s) 1660, 1941, 2065
NcoI CCATGG 3 cut(s) 537, 1668, 1949
NheI GCTAGC 1 cut(s) 575
NlaIV GGNNCC 7 cut(s) 287, 470, 1404, 1982, 2187, 2221, 2583
NmeAIII GCCGAG 2 cut(s) 201, 406
NmuCI GTSAC 4 cut(s) 1488, 1885, 2077, 2095
NruI TCGCGA 1 cut(s) 476
NsbI TGCGCA 1 cut(s) 67
NsiI ATGCAT 1 cut(s) 1833
NspI RCATGY 1 cut(s) 558
NspV TTCGAA 2 cut(s) 2244, 2346
PaeR7I CTCGAG 1 cut(s) 407
PceI AGGCCT 1 cut(s) 745
PciI ACATGT 1 cut(s) 554
PciSI GCTCTTC 2 cut(s) 1152, 1812
PcsI WCGNNNNNNNCGW 2 cut(s) 327, 480
PctI GAATGC 1 cut(s) 1999
PdmI GAANNNNTTC 2 cut(s) 153, 491
PflFI GACNNNGTC 2 cut(s) 1538, 2377
PleI GAGTC 5 cut(s) 184, 365, 391, 840, 1205
PluTI GGCGCC 1 cut(s) 1984
PpsI GAGTC 5 cut(s) 184, 365, 391, 840, 1205
Ppu21I YACGTR 2 cut(s) 2095, 2168
PscI ACATGT 1 cut(s) 554
Psp124BI GAGCTC 2 cut(s) 1381, 1438
Psp1406I AACGTT 1 cut(s) 1011
Psp6I CCWGG 1 cut(s) 2497
PspFI CCCAGC 2 cut(s) 836, 2179
PspGI CCWGG 1 cut(s) 2497
PspN4I GGNNCC 7 cut(s) 287, 470, 1404, 1982, 2187, 2221, 2583
PspPI GGNCC 7 cut(s) 1662, 1946, 2103, 2237, 2368, 2391, 2571
PspXI VCTCGAGB 1 cut(s) 407
PstI CTGCAG 1 cut(s) 2781
PsuI RGATCY 4 cut(s) 1402, 2259, 2545, 2581
PsyI GACNNNGTC 2 cut(s) 1538, 2377
PvuII CAGCTG 1 cut(s) 2776
RruI TCGCGA 1 cut(s) 476
RsaI GTAC 7 cut(s) 956, 1007, 1310, 1362, 1601, 1695, 1961
RsaNI GTAC 7 cut(s) 955, 1006, 1309, 1361, 1600, 1694, 1960
RseI CAYNNNNRTG 1 cut(s) 185
SacI GAGCTC 2 cut(s) 1381, 1438
SacII CCGCGG 1 cut(s) 2577
SapI GCTCTTC 2 cut(s) 1152, 1812
SaqAI TTAA 9 cut(s) 561, 719, 1172, 1305, 1590, 1826, 1844, 2069, 2607
Sau96I GGNCC 7 cut(s) 1662, 1946, 2103, 2237, 2368, 2391, 2571
ScaI AGTACT 1 cut(s) 1310
SchI GAGTC 5 cut(s) 184, 366, 392, 840, 1206
ScrFI CCNGG 4 cut(s) 1660, 1941, 2065, 2499
SduI GDGCHC 7 cut(s) 463, 471, 1334, 1381, 1438, 2313, 2388
SfaNI GCATC 6 cut(s) 234, 1569, 2283, 2530, 2829, 2924
SfcI CTRYAG 2 cut(s) 1366, 2777
SfoI GGCGCC 1 cut(s) 1982
Sfr274I CTCGAG 1 cut(s) 407
Sfr303I CCGCGG 1 cut(s) 2577
SfuI TTCGAA 2 cut(s) 2244, 2346
SgrBI CCGCGG 1 cut(s) 2577
SinI GGWCC 3 cut(s) 1662, 1946, 2103
SlaI CTCGAG 1 cut(s) 407
SmiMI CAYNNNNRTG 1 cut(s) 185
SmlI CTYRAG 1 cut(s) 407
SmoI CTYRAG 1 cut(s) 407
SpeI ACTAGT 1 cut(s) 275
SseBI AGGCCT 1 cut(s) 745
SspDI GGCGCC 1 cut(s) 1980
SspI AATATT 1 cut(s) 2522
SstI GAGCTC 2 cut(s) 1381, 1438
StuI AGGCCT 1 cut(s) 745
StyD4I CCNGG 4 cut(s) 1658, 1939, 2063, 2497
StyI CCWWGG 5 cut(s) 537, 669, 1063, 1668, 1949
TaaI ACNGT 5 cut(s) 623, 869, 1538, 1964, 2855
TaiI ACGT 6 cut(s) 333, 1014, 1975, 2097, 2163, 2170
TatI WGTACW 2 cut(s) 954, 1308
TauI GCSGC 3 cut(s) 403, 2186, 2576
Tru1I TTAA 9 cut(s) 561, 719, 1172, 1305, 1590, 1826, 1844, 2069, 2607
Tru9I TTAA 9 cut(s) 561, 719, 1172, 1305, 1590, 1826, 1844, 2069, 2607
TscAI CASTG 7 cut(s) 626, 704, 1388, 1660, 1864, 2027, 2122
TseFI GTSAC 4 cut(s) 1488, 1885, 2077, 2095
Tsp45I GTSAC 4 cut(s) 1488, 1885, 2077, 2095
TspGWI ACGGA 3 cut(s) 1587, 1627, 2300
TspRI CASTG 7 cut(s) 626, 704, 1388, 1660, 1864, 2027, 2122
Tth111I GACNNNGTC 2 cut(s) 1538, 2377
VneI GTGCAC 1 cut(s) 2384
VpaK11BI GGWCC 3 cut(s) 1662, 1946, 2103
XagI CCTNNNNNAGG 1 cut(s) 91
XapI RAATTY 3 cut(s) 855, 2666, 2896
XceI RCATGY 1 cut(s) 558
XhoI CTCGAG 1 cut(s) 407
XmnI GAANNNNTTC 2 cut(s) 153, 491
ZrmI AGTACT 1 cut(s) 1310
Zsp2I ATGCAT 1 cut(s) 1833
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.