ARM-repeat Tetratricopeptide repeat (TPR)-like protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G43120 AT5G43120 |
| fragaria_vesca | FvH4_2g33380 |
| malus_domestica | MD08G1088700.v1.1 MD15G1073700.v1.1 |
| prunus_persica | Prupe.1G426500_v2.0.a1 |
| pyrus_communis | pycom08g07210 |
| rosa_chinensis | RchiOBHm_Chr6g0309161 |
| rosa_laevigata | RLG00000010585 |
| rosa_multiflora | Rmu_sc0020102.1_g000005 |
| rosa_roxburghii | Rroxscaffold_7G00159600 |
| rosa_rugosa | Rorug06G0370100 |
| rosa_samantha | Rh6AG483000 Rh6BG492100 Rh6CG496800 Rh6DG483700 |
| rosa_wichuraiana | Rw6G042060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1645 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 212 |
| AciI | CCGC | 3 cut(s) | 362, 1002, 1570 |
| AcoI | YGGCCR | 1 cut(s) | 792 |
| AcsI | RAATTY | 4 cut(s) | 864, 1138, 1156, 1447 |
| AcuI | CTGAAG | 4 cut(s) | 32, 501, 900, 1323 |
| AcvI | CACGTG | 1 cut(s) | 1626 |
| AfaI | GTAC | 3 cut(s) | 932, 983, 1692 |
| AfeI | AGCGCT | 1 cut(s) | 447 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 84, 212 |
| AflIII | ACRYGT | 1 cut(s) | 539 |
| AgsI | TTSAA | 9 cut(s) | 112, 247, 275, 736, 763, 1114, 1133, 1162, 1676 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 129, 161, 400, 432 |
| Alw21I | GWGCWC | 2 cut(s) | 1369, 1426 |
| Alw26I | GTCTC | 2 cut(s) | 31, 696 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1400 |
| Ama87I | CYCGRG | 2 cut(s) | 441, 907 |
| Aor51HI | AGCGCT | 1 cut(s) | 447 |
| AoxI | GGCC | 2 cut(s) | 792, 1620 |
| ApeKI | GCWGC | 6 cut(s) | 308, 437, 955, 1400, 1545, 1592 |
| ApoI | RAATTY | 4 cut(s) | 864, 1138, 1156, 1447 |
| AspLEI | GCGC | 1 cut(s) | 448 |
| AsuC2I | CCSGG | 1 cut(s) | 1645 |
| AsuHPI | GGTGA | 5 cut(s) | 176, 446, 798, 1073, 1585 |
| AvaI | CYCGRG | 2 cut(s) | 441, 907 |
| BaeGI | GKGCMC | 1 cut(s) | 1322 |
| BalI | TGGCCA | 1 cut(s) | 794 |
| BanII | GRGCYC | 2 cut(s) | 1369, 1426 |
| BauI | CACGAG | 1 cut(s) | 34 |
| BbrPI | CACGTG | 1 cut(s) | 1626 |
| BbsI | GAAGAC | 3 cut(s) | 138, 536, 906 |
| Bbv12I | GWGCWC | 2 cut(s) | 1369, 1426 |
| BbvCI | CCTCAGC | 1 cut(s) | 660 |
| BbvI | GCAGC | 6 cut(s) | 320, 424, 942, 1387, 1532, 1579 |
| BccI | CCATC | 5 cut(s) | 214, 1513, 1609, 1768, 1837 |
| BclI | TGATCA | 1 cut(s) | 1602 |
| BcnI | CCSGG | 1 cut(s) | 1645 |
| BcoDI | GTCTC | 2 cut(s) | 31, 696 |
| BfmI | CTRYAG | 1 cut(s) | 486 |
| BfoI | RGCGCY | 1 cut(s) | 449 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 359 |
| BisI | GCNGC | 7 cut(s) | 309, 438, 956, 1002, 1401, 1546, 1593 |
| BlpI | GCTNAGC | 1 cut(s) | 155 |
| BlsI | GCNGC | 7 cut(s) | 310, 439, 957, 1003, 1402, 1547, 1594 |
| Bme1390I | CCNGG | 1 cut(s) | 1645 |
| BmeT110I | CYCGRG | 2 cut(s) | 441, 907 |
| BmrFI | CCNGG | 1 cut(s) | 1645 |
| BmsI | GCATC | 3 cut(s) | 261, 1387, 1557 |
| BpiI | GAAGAC | 3 cut(s) | 138, 536, 906 |
| BpmI | CTGGAG | 2 cut(s) | 1425, 1489 |
| Bpu10I | CCTNAGC | 1 cut(s) | 660 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 155 |
| BpuMI | CCSGG | 1 cut(s) | 1645 |
| Bsa29I | ATCGAT | 2 cut(s) | 942, 993 |
| BsaAI | YACGTR | 2 cut(s) | 1598, 1626 |
| BsaI | GGTCTC | 2 cut(s) | 31, 696 |
| BsaJI | CCNNGG | 2 cut(s) | 136, 1039 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1610, 1640 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 84, 212 |
| Bse1I | ACTGG | 1 cut(s) | 1442 |
| Bse3DI | GCAATG | 1 cut(s) | 386 |
| BseCI | ATCGAT | 2 cut(s) | 942, 993 |
| BseDI | CCNNGG | 2 cut(s) | 136, 1039 |
| BseGI | GGATG | 3 cut(s) | 294, 1237, 1738 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 84, 212 |
| BseMI | GCAATG | 1 cut(s) | 386 |
| BseMII | CTCAG | 8 cut(s) | 146, 336, 392, 651, 861, 1382, 1407, 1548 |
| BseNI | ACTGG | 1 cut(s) | 1442 |
| BseRI | GAGGAG | 4 cut(s) | 100, 677, 950, 1186 |
| BseSI | GKGCMC | 1 cut(s) | 1322 |
| BseXI | GCAGC | 6 cut(s) | 320, 424, 942, 1387, 1532, 1579 |
| BsgI | GTGCAG | 2 cut(s) | 40, 1578 |
| BshFI | GGCC | 2 cut(s) | 794, 1622 |
| BshVI | ATCGAT | 2 cut(s) | 942, 993 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1369, 1426 |
| BsiHKCI | CYCGRG | 2 cut(s) | 441, 907 |
| BsiSI | CCGG | 1 cut(s) | 1645 |
| BslFI | GGGAC | 2 cut(s) | 1403, 1424 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 84, 212 |
| BsmAI | GTCTC | 2 cut(s) | 31, 696 |
| BsmFI | GGGAC | 2 cut(s) | 1403, 1424 |
| BsnI | GGCC | 2 cut(s) | 794, 1622 |
| Bso31I | GGTCTC | 2 cut(s) | 31, 696 |
| BsoBI | CYCGRG | 2 cut(s) | 441, 907 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1322, 1369, 1426 |
| Bsp143I | GATC | 5 cut(s) | 394, 515, 1049, 1475, 1602 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 155 |
| BspACI | CCGC | 3 cut(s) | 362, 1002, 1570 |
| BspANI | GGCC | 2 cut(s) | 794, 1622 |
| BspCNI | CTCAG | 8 cut(s) | 147, 337, 393, 652, 862, 1381, 1406, 1549 |
| BspDI | ATCGAT | 2 cut(s) | 942, 993 |
| BspQI | GCTCTTC | 2 cut(s) | 1140, 1637 |
| BspTNI | GGTCTC | 2 cut(s) | 31, 696 |
| BsrDI | GCAATG | 1 cut(s) | 386 |
| BsrI | ACTGG | 1 cut(s) | 1442 |
| BssECI | CCNNGG | 2 cut(s) | 136, 1039 |
| BssMI | GATC | 5 cut(s) | 394, 515, 1049, 1475, 1602 |
| BssSI | CACGAG | 1 cut(s) | 34 |
| BssT1I | CCWWGG | 2 cut(s) | 136, 1039 |
| Bst2BI | CACGAG | 1 cut(s) | 34 |
| Bst4CI | ACNGT | 4 cut(s) | 608, 845, 1526, 1751 |
| Bst6I | CTCTTC | 5 cut(s) | 498, 1140, 1172, 1637, 1821 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 314 |
| BstBAI | YACGTR | 2 cut(s) | 1598, 1626 |
| BstC8I | GCNNGC | 7 cut(s) | 27, 31, 106, 463, 718, 749, 1568 |
| BstEII | GGTNACC | 1 cut(s) | 452 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 82 |
| BstF5I | GGATG | 3 cut(s) | 294, 1237, 1738 |
| BstH2I | RGCGCY | 1 cut(s) | 449 |
| BstHHI | GCGC | 1 cut(s) | 448 |
| BstKTI | GATC | 5 cut(s) | 397, 518, 1052, 1478, 1605 |
| BstMAI | GTCTC | 2 cut(s) | 31, 696 |
| BstMBI | GATC | 5 cut(s) | 394, 515, 1049, 1475, 1602 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 22, 314, 350, 359, 443 |
| BstNSI | RCATGY | 1 cut(s) | 543 |
| BstPI | GGTNACC | 1 cut(s) | 452 |
| BstSCI | CCNGG | 1 cut(s) | 1643 |
| BstSFI | CTRYAG | 1 cut(s) | 486 |
| BstSLI | GKGCMC | 1 cut(s) | 1322 |
| BstV1I | GCAGC | 6 cut(s) | 320, 424, 942, 1387, 1532, 1579 |
| BstV2I | GAAGAC | 3 cut(s) | 138, 536, 906 |
| Bsu15I | ATCGAT | 2 cut(s) | 942, 993 |
| BsuRI | GGCC | 2 cut(s) | 794, 1622 |
| BsuTUI | ATCGAT | 2 cut(s) | 942, 993 |
| BtsCI | GGATG | 3 cut(s) | 294, 1237, 1738 |
| BtsIMutI | CAGTG | 3 cut(s) | 604, 1376, 1449 |
| Cac8I | GCNNGC | 7 cut(s) | 27, 31, 106, 463, 718, 749, 1568 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1400 |
| CfoI | GCGC | 1 cut(s) | 448 |
| ClaI | ATCGAT | 2 cut(s) | 942, 993 |
| Csp6I | GTAC | 3 cut(s) | 931, 982, 1691 |
| CviAII | CATG | 9 cut(s) | 61, 229, 314, 334, 523, 540, 548, 934, 1492 |
| CviQI | GTAC | 3 cut(s) | 931, 982, 1691 |
| DpnI | GATC | 5 cut(s) | 396, 517, 1051, 1477, 1604 |
| DpnII | GATC | 5 cut(s) | 394, 515, 1049, 1475, 1602 |
| DraI | TTTAAA | 1 cut(s) | 705 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1645 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1645 |
| EaeI | YGGCCR | 1 cut(s) | 792 |
| Eam1104I | CTCTTC | 5 cut(s) | 498, 1140, 1172, 1637, 1821 |
| EarI | CTCTTC | 5 cut(s) | 498, 1140, 1172, 1637, 1821 |
| Ecl136II | GAGCTC | 2 cut(s) | 1367, 1424 |
| Eco130I | CCWWGG | 2 cut(s) | 136, 1039 |
| Eco24I | GRGCYC | 2 cut(s) | 1369, 1426 |
| Eco31I | GGTCTC | 2 cut(s) | 31, 696 |
| Eco47III | AGCGCT | 1 cut(s) | 447 |
| Eco53kI | GAGCTC | 2 cut(s) | 1367, 1424 |
| Eco57I | CTGAAG | 4 cut(s) | 32, 501, 900, 1323 |
| Eco72I | CACGTG | 1 cut(s) | 1626 |
| Eco88I | CYCGRG | 2 cut(s) | 441, 907 |
| Eco91I | GGTNACC | 1 cut(s) | 452 |
| EcoICRI | GAGCTC | 2 cut(s) | 1367, 1424 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 82 |
| EcoO65I | GGTNACC | 1 cut(s) | 452 |
| EcoRI | GAATTC | 1 cut(s) | 1447 |
| EcoT14I | CCWWGG | 2 cut(s) | 136, 1039 |
| EcoT38I | GRGCYC | 2 cut(s) | 1369, 1426 |
| ErhI | CCWWGG | 2 cut(s) | 136, 1039 |
| FaeI | CATG | 9 cut(s) | 64, 232, 317, 337, 526, 543, 551, 937, 1495 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 227, 259, 740, 772, 1068, 1100, 1700, 1732 |
| FaqI | GGGAC | 2 cut(s) | 1403, 1424 |
| FatI | CATG | 9 cut(s) | 60, 228, 313, 333, 522, 539, 547, 933, 1491 |
| FauI | CCCGC | 1 cut(s) | 1563 |
| FauNDI | CATATG | 1 cut(s) | 1257 |
| FbaI | TGATCA | 1 cut(s) | 1602 |
| Fnu4HI | GCNGC | 7 cut(s) | 309, 438, 956, 1002, 1401, 1546, 1593 |
| FokI | GGATG | 3 cut(s) | 281, 1244, 1745 |
| FriOI | GRGCYC | 2 cut(s) | 1369, 1426 |
| Fsp4HI | GCNGC | 7 cut(s) | 309, 438, 956, 1002, 1401, 1546, 1593 |
| GlaI | GCGC | 1 cut(s) | 447 |
| GluI | GCNGC | 7 cut(s) | 309, 438, 956, 1002, 1401, 1546, 1593 |
| GsuI | CTGGAG | 2 cut(s) | 1425, 1489 |
| HaeII | RGCGCY | 1 cut(s) | 449 |
| HaeIII | GGCC | 2 cut(s) | 794, 1622 |
| HapII | CCGG | 1 cut(s) | 1645 |
| HhaI | GCGC | 1 cut(s) | 448 |
| Hin1II | CATG | 9 cut(s) | 64, 232, 317, 337, 526, 543, 551, 937, 1495 |
| Hin6I | GCGC | 1 cut(s) | 446 |
| HinP1I | GCGC | 1 cut(s) | 446 |
| HincII | GTYRAC | 3 cut(s) | 677, 1437, 1650 |
| HindII | GTYRAC | 3 cut(s) | 677, 1437, 1650 |
| HindIII | AAGCTT | 1 cut(s) | 1513 |
| HpaII | CCGG | 1 cut(s) | 1645 |
| HphI | GGTGA | 5 cut(s) | 176, 446, 798, 1073, 1585 |
| Hpy166II | GTNNAC | 4 cut(s) | 677, 1437, 1650, 1794 |
| Hpy188I | TCNGA | 9 cut(s) | 128, 402, 481, 871, 919, 1303, 1396, 1558, 1702 |
| Hpy188III | TCNNGA | 6 cut(s) | 876, 907, 1199, 1468, 1636, 1667 |
| Hpy8I | GTNNAC | 4 cut(s) | 677, 1437, 1650, 1794 |
| HpyAV | CCTTC | 4 cut(s) | 571, 1697, 1702, 1851 |
| HpyCH4III | ACNGT | 4 cut(s) | 608, 845, 1526, 1751 |
| HpyCH4IV | ACGT | 2 cut(s) | 1597, 1625 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 22, 314, 350, 359, 443 |
| HpySE526I | ACGT | 2 cut(s) | 1597, 1625 |
| Hsp92II | CATG | 9 cut(s) | 64, 232, 317, 337, 526, 543, 551, 937, 1495 |
| HspAI | GCGC | 1 cut(s) | 446 |
| Ksp22I | TGATCA | 1 cut(s) | 1602 |
| Kzo9I | GATC | 5 cut(s) | 394, 515, 1049, 1475, 1602 |
| LguI | GCTCTTC | 2 cut(s) | 1140, 1637 |
| LmnI | GCTCC | 2 cut(s) | 22, 963 |
| Lsp1109I | GCAGC | 6 cut(s) | 320, 424, 942, 1387, 1532, 1579 |
| LweI | GCATC | 3 cut(s) | 261, 1387, 1557 |
| MaeII | ACGT | 2 cut(s) | 1597, 1625 |
| MaeIII | GTNAC | 3 cut(s) | 452, 839, 1712 |
| MalI | GATC | 5 cut(s) | 396, 517, 1051, 1477, 1604 |
| MboI | GATC | 5 cut(s) | 394, 515, 1049, 1475, 1602 |
| MfeI | CAATTG | 2 cut(s) | 767, 1376 |
| MhlI | GDGCHC | 3 cut(s) | 1322, 1369, 1426 |
| MlsI | TGGCCA | 1 cut(s) | 794 |
| MluNI | TGGCCA | 1 cut(s) | 794 |
| MlyI | GAGTC | 5 cut(s) | 68, 175, 881, 1385, 1406 |
| MmeI | TCCRAC | 1 cut(s) | 799 |
| Mox20I | TGGCCA | 1 cut(s) | 794 |
| MscI | TGGCCA | 1 cut(s) | 794 |
| MseI | TTAA | 4 cut(s) | 81, 704, 1293, 1814 |
| MslI | CAYNNNNRTG | 1 cut(s) | 189 |
| Msp20I | TGGCCA | 1 cut(s) | 794 |
| MspA1I | CMGCKG | 1 cut(s) | 812 |
| MspI | CCGG | 1 cut(s) | 1645 |
| MspR9I | CCNGG | 1 cut(s) | 1645 |
| MunI | CAATTG | 2 cut(s) | 767, 1376 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 22, 314, 350, 359, 443 |
| NciI | CCSGG | 1 cut(s) | 1645 |
| NdeI | CATATG | 1 cut(s) | 1257 |
| NdeII | GATC | 5 cut(s) | 394, 515, 1049, 1475, 1602 |
| NlaIII | CATG | 9 cut(s) | 64, 232, 317, 337, 526, 543, 551, 937, 1495 |
| NmuCI | GTSAC | 1 cut(s) | 452 |
| NspI | RCATGY | 1 cut(s) | 543 |
| PaeR7I | CTCGAG | 2 cut(s) | 441, 907 |
| PciI | ACATGT | 1 cut(s) | 539 |
| PciSI | GCTCTTC | 2 cut(s) | 1140, 1637 |
| PfeI | GAWTC | 7 cut(s) | 5, 216, 736, 831, 939, 1579, 1697 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 212 |
| PkrI | GCNGC | 7 cut(s) | 310, 439, 957, 1003, 1402, 1547, 1594 |
| PleI | GAGTC | 5 cut(s) | 68, 175, 880, 1385, 1406 |
| PmaCI | CACGTG | 1 cut(s) | 1626 |
| PmlI | CACGTG | 1 cut(s) | 1626 |
| PpsI | GAGTC | 5 cut(s) | 68, 175, 880, 1385, 1406 |
| Ppu21I | YACGTR | 2 cut(s) | 1598, 1626 |
| PscI | ACATGT | 1 cut(s) | 539 |
| Psp124BI | GAGCTC | 2 cut(s) | 1369, 1426 |
| PspCI | CACGTG | 1 cut(s) | 1626 |
| PspEI | GGTNACC | 1 cut(s) | 452 |
| PspXI | VCTCGAGB | 1 cut(s) | 441 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1400 |
| PvuII | CAGCTG | 1 cut(s) | 812 |
| RsaI | GTAC | 3 cut(s) | 932, 983, 1692 |
| RsaNI | GTAC | 3 cut(s) | 931, 982, 1691 |
| RseI | CAYNNNNRTG | 1 cut(s) | 189 |
| SacI | GAGCTC | 2 cut(s) | 1369, 1426 |
| SapI | GCTCTTC | 2 cut(s) | 1140, 1637 |
| SaqAI | TTAA | 4 cut(s) | 81, 704, 1293, 1814 |
| SatI | GCNGC | 7 cut(s) | 309, 438, 956, 1002, 1401, 1546, 1593 |
| Sau3AI | GATC | 5 cut(s) | 394, 515, 1049, 1475, 1602 |
| SchI | GAGTC | 5 cut(s) | 68, 175, 881, 1385, 1406 |
| ScrFI | CCNGG | 1 cut(s) | 1645 |
| SduI | GDGCHC | 3 cut(s) | 1322, 1369, 1426 |
| SfaNI | GCATC | 3 cut(s) | 261, 1387, 1557 |
| SfcI | CTRYAG | 1 cut(s) | 486 |
| Sfr274I | CTCGAG | 2 cut(s) | 441, 907 |
| SlaI | CTCGAG | 2 cut(s) | 441, 907 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 189 |
| SmlI | CTYRAG | 2 cut(s) | 441, 907 |
| SmoI | CTYRAG | 2 cut(s) | 441, 907 |
| SsiI | CCGC | 3 cut(s) | 362, 1002, 1570 |
| SspI | AATATT | 1 cut(s) | 700 |
| SstI | GAGCTC | 2 cut(s) | 1369, 1426 |
| StyD4I | CCNGG | 1 cut(s) | 1643 |
| StyI | CCWWGG | 2 cut(s) | 136, 1039 |
| TaaI | ACNGT | 4 cut(s) | 608, 845, 1526, 1751 |
| TaiI | ACGT | 2 cut(s) | 1600, 1628 |
| TaqI | TCGA | 6 cut(s) | 442, 875, 908, 942, 993, 1637 |
| TaqII | GACCGA | 1 cut(s) | 440 |
| TatI | WGTACW | 2 cut(s) | 930, 1690 |
| TauI | GCSGC | 1 cut(s) | 1004 |
| TfiI | GAWTC | 7 cut(s) | 5, 216, 736, 831, 939, 1579, 1697 |
| Tru1I | TTAA | 4 cut(s) | 81, 704, 1293, 1814 |
| Tru9I | TTAA | 4 cut(s) | 81, 704, 1293, 1814 |
| TscAI | CASTG | 3 cut(s) | 611, 1376, 1449 |
| TseFI | GTSAC | 1 cut(s) | 452 |
| TseI | GCWGC | 6 cut(s) | 308, 437, 955, 1400, 1545, 1592 |
| Tsp45I | GTSAC | 1 cut(s) | 452 |
| TspRI | CASTG | 3 cut(s) | 611, 1376, 1449 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 212 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 82 |
| XapI | RAATTY | 4 cut(s) | 864, 1138, 1156, 1447 |
| XceI | RCATGY | 1 cut(s) | 543 |
| XhoI | CTCGAG | 2 cut(s) | 441, 907 |