Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0011390

Physical Location & Seq

Genomic Coordinates Reverse (-)

10473273 .. 10478045

Gene Structure 4773 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1115600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1458 bp

ATGGAGTCAAGCCTCTCTTCACTGCACGATCACCACCATTTCTCTCCAAGCTTGAGCTTCCGAACCAGAAACCCTCTCCTCTCTCACTCTTCAAAACGCAGCTCCTTGAGGACTCTGAAGCTAGGGTTTCGAACCACTTCCACCGTTCCCTCCTCCACAGCTCAGGACAAAGCGGCCGCGAGCTCCGTCTACGTCCCCACCCCTCGGAATCGAGACCTTCGAACACCTCACAGCGGGTACCATTTCGATGGAACGAGCCGGAAATTCTTTGAAGGATGGTACTTCAAGGTTGCGATTCCGGAGCGGAGGCAGAGCTTCTGCTTCATGTACTCCGTTGAGAATCCTGCTTTCTGCAAGCCACTGACGGCGTTAGAATTGGTTCAGAACGGGCCAAGGTCGACCGGGGTCGGTGCTCAAATCCTGGGTGCCTACGACAAGTACATTTGCCAGTACTCTGAAGAATCTCAGAACTTTTGGGGAAGCAGGGATGAGCTTATGTTGGGGAACACTTTTATAGCAGAAAAACAATCAAAGCCTCCGAACAATGAGGTTCTTCCGAAGGAATTCGATAGTAGAGTGACAGAAGGTTTTCAAGTCACCCCACTTTGGCATCAAGGTTCCATTCGTGATGATGGCAGGTCTGATTATGTAGAAACTGTGCCAAGTGCTCGCTGGGAATACAGTACCCGCCCAATTTATGGATGGGGTGATGTTGGGTCTAAGCAGAAGTCTACTGCAGGCTGGTTAGCAGCTTTTCCTGTATTTGAACCCCATTGGCAAATATGCATGTCTGGTGGATTGTCAACAGGTTGGATAGAGTGGGACGGTGAAAGATTTGAGTTTGAAAATGCCCCTTCTTATTCTGAAAAGAATTGGGGTGGAGCATTCCCAAGAAAATGGTTCTGGGTTCAGTGTAATGTTTTTGAAGGCGCTACTGGAGAAGTTGCTCTGACATCAGGCGGTGGTTTGAGGCAACTACCTGGGTTAACAGAATCTTTTGAAAACGCTGCTTTGATCGGAGTTCACTATGGTGGAAAGTTTTATGAATTTGTACCATGGAATGGTGTTGTTAGTTGGGAAATTGCTCCTTGGGGTTACTGGTCAATTACTGCAGAGAATGAAACACACATGGTTGAATTAGAGGCAACAACAGAGGATCCTGGTACAACTTTGCGTGCTCCAACATCAGAAGCTGGACTTGCTCCAGCTTGTAAAGATTCTTGCTTCGGTGATCTAAAATTAAAAATGTGGGAACGAAGATATGATGGTAACAAGGGGAAGGTGATATTGGATGTTACAAGTAACATGGCTGCAGTAGAAGTTGGAGGAGGACCATGGTTCAGTACTTGGAAGGTCAAAGCTACCACACCCGAGCACCTTAGCCGGGCTCTCAGAGTTCCCGTTGATGTGGAAGGGATGTACAATCTGGTTCCATTATTCAAACCCGCTGGTCTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006631 GO:0006720 GO:0006721 GO:0006725 GO:0006766 GO:0006775 GO:0006778 GO:0006807 GO:0006810 GO:0006950 GO:0006970 GO:0006979 GO:0008150 GO:0008152 GO:0008643 GO:0009058 GO:0009110 GO:0009266 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009528 GO:0009532 GO:0009534 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009642 GO:0009644 GO:0009651 GO:0009706 GO:0009915 GO:0009941 GO:0009975 GO:0009976 GO:0009987 GO:0010189 GO:0010232 GO:0010233 GO:0010287 GO:0015766 GO:0015770 GO:0015772 GO:0015994 GO:0016020 GO:0016108 GO:0016116 GO:0016122 GO:0018130 GO:0019752 GO:0019866 GO:0031090 GO:0031347 GO:0031967 GO:0031969 GO:0031975 GO:0031976 GO:0031984 GO:0032501 GO:0032787 GO:0033013 GO:0042170 GO:0042360 GO:0042362 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048583 GO:0050789 GO:0050896 GO:0051179 GO:0051186 GO:0051234 GO:0065007 GO:0071702 GO:0071704 GO:0080134 GO:1901360 GO:1901362 GO:1901564 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00130 ko01100 ko01110 map00130 map01100 map01110

Pfam Domains

Protein Families

Tocopherol_cycl

Protein Analysis

486

Amino Acids

54.32

Weight (kDa)

6.21

Isoelectric Point (pI)

47.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Tocopherol_cycl	PF14249	87 - 443	1e-144	Tocopherol cyclase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011390)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32770
fragaria_vesca	FvH4_2g35770 FvH4_2g35770 FvH4_2g35770 FvH4_2g35770
malus_domestica	MD08G1115600.v1.1 MD15G1095400.v1.1
prunus_persica	Prupe.1G450300_v2.0.a1
pyrus_communis	pycom15g08780
rosa_chinensis	RchiOBHm_Chr6g0306001
rosa_laevigata	RLG00000010833
rosa_multiflora	Rmu_sc0020534.1_g000002
rosa_roxburghii	Rroxscaffold_7G00162140
rosa_rugosa	Rorug06G0346200 Rorug06G0346300
rosa_samantha	Rh6AG458000 Rh6BG442800 Rh6CG472500 Rh6DG458700
rosa_wichuraiana	Rw6G039950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	627
Acc65I	GGTACC	1 cut(s)	237
AccB1I	GGYRCC	2 cut(s)	237, 425
AccB7I	CCANNNNNTGG	2 cut(s)	698, 1061
AccBSI	CCGCTC	1 cut(s)	304
AccI	GTMKAC	3 cut(s)	189, 398, 731
AccII	CGCG	1 cut(s)	179
AccIII	TCCGGA	1 cut(s)	298
AciI	CCGC	7 cut(s)	173, 177, 234, 304, 688, 960, 1446
AclWI	GGATC	2 cut(s)	1151, 1164
AcoI	YGGCCR	1 cut(s)	174
AcsI	RAATTY	3 cut(s)	263, 563, 1046
AcuI	CTGAAG	2 cut(s)	137, 477
AfiI	CCNNNNNNNGG	6 cut(s)	204, 233, 606, 698, 1061, 1384
AjnI	CCWGG	3 cut(s)	420, 979, 1159
AjuI	GAANNNNNNNTTGG	2 cut(s)	1271, 1303
AleI	CACNNNNGTG	1 cut(s)	1029
Alw21I	GWGCWC	5 cut(s)	185, 415, 670, 1180, 1377
Alw26I	GTCTC	1 cut(s)	207
AlwI	GGATC	2 cut(s)	1151, 1164
AlwNI	CAGNNNCTG	1 cut(s)	1193
Ama87I	CYCGRG	1 cut(s)	1370
Aor13HI	TCCGGA	1 cut(s)	298
AoxI	GGCC	2 cut(s)	174, 389
ApeKI	GCWGC	4 cut(s)	99, 749, 1007, 1310
ApoI	RAATTY	3 cut(s)	263, 563, 1046
Asp700I	GAANNNNTTC	4 cut(s)	136, 378, 563, 588
Asp718I	GGTACC	1 cut(s)	237
AspLEI	GCGC	1 cut(s)	932
AspS9I	GGNCC	2 cut(s)	389, 1331
AsuC2I	CCSGG	2 cut(s)	403, 1385
AsuHPI	GGTGA	6 cut(s)	23, 589, 719, 839, 1241, 1294
AsuII	TTCGAA	2 cut(s)	130, 220
AvaI	CYCGRG	1 cut(s)	1370
AvaII	GGWCC	1 cut(s)	1331
BamHI	GGATCC	1 cut(s)	1156
BanI	GGYRCC	2 cut(s)	237, 425
BanII	GRGCYC	2 cut(s)	185, 1390
Bbv12I	GWGCWC	5 cut(s)	185, 415, 670, 1180, 1377
BbvI	GCAGC	4 cut(s)	111, 761, 994, 1297
BccI	CCATC	5 cut(s)	242, 270, 626, 696, 1259
BceAI	ACGGC	1 cut(s)	381
BciT130I	CCWGG	3 cut(s)	422, 981, 1161
BcnI	CCSGG	2 cut(s)	403, 1385
BcoDI	GTCTC	1 cut(s)	207
BfaI	CTAG	1 cut(s)	122
BfmI	CTRYAG	4 cut(s)	735, 1110, 1311, 1454
BfoI	RGCGCY	1 cut(s)	933
BfuAI	ACCTGC	1 cut(s)	627
BisI	GCNGC	6 cut(s)	100, 174, 177, 750, 1008, 1311
BlsI	GCNGC	6 cut(s)	101, 175, 178, 751, 1009, 1312
BmcAI	AGTACT	2 cut(s)	452, 1345
Bme1390I	CCNGG	5 cut(s)	403, 422, 981, 1161, 1385
Bme18I	GGWCC	1 cut(s)	1331
BmeT110I	CYCGRG	1 cut(s)	1370
BmgT120I	GGNCC	2 cut(s)	389, 1331
BmiI	GGNNCC	5 cut(s)	239, 427, 619, 1158, 1431
BmrFI	CCNGG	5 cut(s)	403, 422, 981, 1161, 1385
BmsI	GCATC	1 cut(s)	619
BoxI	GACNNNNGTC	1 cut(s)	404
BpmI	CTGGAG	2 cut(s)	957, 1188
Bpu10I	CCTNAGC	2 cut(s)	162, 1379
Bpu14I	TTCGAA	2 cut(s)	130, 220
BpuEI	CTTGAG	2 cut(s)	73, 127
BpuMI	CCSGG	2 cut(s)	403, 1385
BsaI	GGTCTC	1 cut(s)	207
BsaJI	CCNNGG	8 cut(s)	203, 392, 402, 421, 980, 1055, 1088, 1334
BsaWI	WCCGGW	1 cut(s)	298
Bsc4I	CCNNNNNNNGG	6 cut(s)	204, 233, 606, 698, 1061, 1384
Bse1I	ACTGG	3 cut(s)	448, 940, 1103
BseAI	TCCGGA	1 cut(s)	298
BseBI	CCWGG	3 cut(s)	422, 981, 1161
BseDI	CCNNGG	8 cut(s)	203, 392, 402, 421, 980, 1055, 1088, 1334
BseGI	GGATG	5 cut(s)	281, 493, 707, 1297, 1422
BseLI	CCNNNNNNNGG	6 cut(s)	204, 233, 606, 698, 1061, 1384
BseMII	CTCAG	3 cut(s)	176, 479, 1405
BseNI	ACTGG	3 cut(s)	448, 940, 1103
BseRI	GAGGAG	3 cut(s)	68, 142, 1341
BseX3I	CGGCCG	1 cut(s)	174
BseXI	GCAGC	4 cut(s)	111, 761, 994, 1297
BseYI	CCCAGC	1 cut(s)	672
BsgI	GTGCAG	1 cut(s)	8
Bsh1236I	CGCG	1 cut(s)	179
Bsh1285I	CGRYCG	2 cut(s)	177, 402
BshFI	GGCC	2 cut(s)	176, 391
BshNI	GGYRCC	2 cut(s)	237, 425
BsiEI	CGRYCG	2 cut(s)	177, 402
BsiHKAI	GWGCWC	5 cut(s)	185, 415, 670, 1180, 1377
BsiHKCI	CYCGRG	1 cut(s)	1370
BsiSI	CCGG	4 cut(s)	259, 299, 402, 1384
BslFI	GGGAC	2 cut(s)	179, 836
BslI	CCNNNNNNNGG	6 cut(s)	204, 233, 606, 698, 1061, 1384
BsmAI	GTCTC	1 cut(s)	207
BsmFI	GGGAC	2 cut(s)	179, 836
BsmI	GAATGC	1 cut(s)	884
BsnI	GGCC	2 cut(s)	176, 391
Bso31I	GGTCTC	1 cut(s)	207
BsoBI	CYCGRG	1 cut(s)	1370
Bsp119I	TTCGAA	2 cut(s)	130, 220
Bsp1286I	GDGCHC	6 cut(s)	185, 415, 670, 1180, 1377, 1390
Bsp13I	TCCGGA	1 cut(s)	298
Bsp1407I	TGTACA	1 cut(s)	1419
Bsp143I	GATC	4 cut(s)	28, 1014, 1156, 1231
Bsp19I	CCATGG	2 cut(s)	1055, 1334
BspACI	CCGC	7 cut(s)	173, 177, 234, 304, 688, 960, 1446
BspANI	GGCC	2 cut(s)	176, 391
BspCNI	CTCAG	3 cut(s)	175, 478, 1404
BspEI	TCCGGA	1 cut(s)	298
BspFNI	CGCG	1 cut(s)	179
BspLI	GGNNCC	5 cut(s)	239, 427, 619, 1158, 1431
BspMAI	CTGCAG	3 cut(s)	739, 1114, 1315
BspMI	ACCTGC	1 cut(s)	627
BspPI	GGATC	2 cut(s)	1151, 1164
BspT104I	TTCGAA	2 cut(s)	130, 220
BspT107I	GGYRCC	2 cut(s)	237, 425
BspTNI	GGTCTC	1 cut(s)	207
BsrBI	CCGCTC	1 cut(s)	304
BsrGI	TGTACA	1 cut(s)	1419
BsrI	ACTGG	3 cut(s)	448, 940, 1103
BssECI	CCNNGG	8 cut(s)	203, 392, 402, 421, 980, 1055, 1088, 1334
BssMI	GATC	4 cut(s)	28, 1014, 1156, 1231
BssT1I	CCWWGG	4 cut(s)	392, 1055, 1088, 1334
Bst2UI	CCWGG	3 cut(s)	422, 981, 1161
Bst4CI	ACNGT	4 cut(s)	145, 658, 683, 827
Bst6I	CTCTTC	2 cut(s)	22, 94
BstAUI	TGTACA	1 cut(s)	1419
BstBI	TTCGAA	2 cut(s)	130, 220
BstC8I	GCNNGC	5 cut(s)	181, 356, 670, 739, 1176
BstDEI	CTNAG	5 cut(s)	162, 465, 720, 1379, 1391
BstDSI	CCRYGG	2 cut(s)	1055, 1334
BstF5I	GGATG	5 cut(s)	281, 493, 707, 1297, 1422
BstFNI	CGCG	1 cut(s)	179
BstH2I	RGCGCY	1 cut(s)	933
BstHHI	GCGC	1 cut(s)	932
BstKTI	GATC	4 cut(s)	31, 1017, 1159, 1234
BstMAI	GTCTC	1 cut(s)	207
BstMBI	GATC	4 cut(s)	28, 1014, 1156, 1231
BstMCI	CGRYCG	2 cut(s)	177, 402
BstMWI	GCNNNNNNNGC	1 cut(s)	1199
BstNI	CCWGG	3 cut(s)	422, 981, 1161
BstNSI	RCATGY	1 cut(s)	790
BstPAI	GACNNNNGTC	1 cut(s)	404
BstSCI	CCNGG	5 cut(s)	401, 420, 979, 1159, 1383
BstSFI	CTRYAG	4 cut(s)	735, 1110, 1311, 1454
BstUI	CGCG	1 cut(s)	179
BstV1I	GCAGC	4 cut(s)	111, 761, 994, 1297
BstX2I	RGATCY	1 cut(s)	1156
BstXI	CCANNNNNNTGG	2 cut(s)	248, 897
BstYI	RGATCY	1 cut(s)	1156
BstZI	CGGCCG	1 cut(s)	174
BsuRI	GGCC	2 cut(s)	176, 391
BtgI	CCRYGG	2 cut(s)	1055, 1334
BtsCI	GGATG	5 cut(s)	281, 493, 707, 1297, 1422
BtsI	GCAGTG	1 cut(s)	20
BtsIMutI	CAGTG	3 cut(s)	20, 359, 917
BveI	ACCTGC	1 cut(s)	627
Cac8I	GCNNGC	5 cut(s)	181, 356, 670, 739, 1176
CaiI	CAGNNNCTG	1 cut(s)	1193
CciNI	GCGGCCGC	1 cut(s)	174
CfoI	GCGC	1 cut(s)	932
Cfr13I	GGNCC	2 cut(s)	389, 1331
CviAII	CATG	6 cut(s)	325, 787, 1056, 1129, 1306, 1335
DdeI	CTNAG	5 cut(s)	162, 465, 720, 1379, 1391
DpnI	GATC	4 cut(s)	30, 1016, 1158, 1233
DpnII	GATC	4 cut(s)	28, 1014, 1156, 1231
EaeI	YGGCCR	1 cut(s)	174
EagI	CGGCCG	1 cut(s)	174
Eam1104I	CTCTTC	2 cut(s)	22, 94
EarI	CTCTTC	2 cut(s)	22, 94
Ecl136II	GAGCTC	1 cut(s)	183
EclXI	CGGCCG	1 cut(s)	174
Eco130I	CCWWGG	4 cut(s)	392, 1055, 1088, 1334
Eco24I	GRGCYC	2 cut(s)	185, 1390
Eco31I	GGTCTC	1 cut(s)	207
Eco47I	GGWCC	1 cut(s)	1331
Eco52I	CGGCCG	1 cut(s)	174
Eco53kI	GAGCTC	1 cut(s)	183
Eco57I	CTGAAG	2 cut(s)	137, 477
Eco88I	CYCGRG	1 cut(s)	1370
EcoICRI	GAGCTC	1 cut(s)	183
EcoRI	GAATTC	1 cut(s)	563
EcoRII	CCWGG	3 cut(s)	420, 979, 1159
EcoT14I	CCWWGG	4 cut(s)	392, 1055, 1088, 1334
EcoT22I	ATGCAT	1 cut(s)	788
EcoT38I	GRGCYC	2 cut(s)	185, 1390
ErhI	CCWWGG	4 cut(s)	392, 1055, 1088, 1334
FaeI	CATG	6 cut(s)	328, 790, 1059, 1132, 1309, 1338
FalI	AAGNNNNNCTT	3 cut(s)	33, 1182, 1214
FaqI	GGGAC	2 cut(s)	179, 836
FatI	CATG	6 cut(s)	324, 786, 1055, 1128, 1305, 1334
FauI	CCCGC	3 cut(s)	227, 695, 1453
FblI	GTMKAC	3 cut(s)	189, 398, 731
Fnu4HI	GCNGC	6 cut(s)	100, 174, 177, 750, 1008, 1311
FokI	GGATG	5 cut(s)	288, 500, 714, 1304, 1429
FriOI	GRGCYC	2 cut(s)	185, 1390
Fsp4HI	GCNGC	6 cut(s)	100, 174, 177, 750, 1008, 1311
FspBI	CTAG	1 cut(s)	122
GlaI	GCGC	1 cut(s)	931
GluI	GCNGC	6 cut(s)	100, 174, 177, 750, 1008, 1311
GsaI	CCCAGC	1 cut(s)	676
GsuI	CTGGAG	2 cut(s)	957, 1188
HaeII	RGCGCY	1 cut(s)	933
HaeIII	GGCC	2 cut(s)	176, 391
HapII	CCGG	4 cut(s)	259, 299, 402, 1384
HhaI	GCGC	1 cut(s)	932
Hin1II	CATG	6 cut(s)	328, 790, 1059, 1132, 1309, 1338
Hin6I	GCGC	1 cut(s)	930
HinP1I	GCGC	1 cut(s)	930
HincII	GTYRAC	3 cut(s)	399, 804, 987
HindII	GTYRAC	3 cut(s)	399, 804, 987
HindIII	AAGCTT	1 cut(s)	49
HinfI	GANTC	8 cut(s)	5, 112, 208, 295, 340, 461, 992, 1217
HpaI	GTTAAC	1 cut(s)	987
HpaII	CCGG	4 cut(s)	259, 299, 402, 1384
HphI	GGTGA	6 cut(s)	23, 589, 719, 839, 1241, 1294
Hpy166II	GTNNAC	6 cut(s)	190, 399, 732, 804, 987, 1024
Hpy188III	TCNNGA	4 cut(s)	164, 212, 299, 626
Hpy8I	GTNNAC	6 cut(s)	190, 399, 732, 804, 987, 1024
HpyAV	CCTTC	9 cut(s)	227, 266, 553, 578, 864, 920, 1273, 1345, 1406
HpyCH4III	ACNGT	4 cut(s)	145, 658, 683, 827
HpyCH4IV	ACGT	1 cut(s)	192
HpyCH4V	TGCA	6 cut(s)	25, 354, 737, 786, 1112, 1313
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1199
HpyF3I	CTNAG	5 cut(s)	162, 465, 720, 1379, 1391
HpySE526I	ACGT	1 cut(s)	192
Hsp92II	CATG	6 cut(s)	328, 790, 1059, 1132, 1309, 1338
HspAI	GCGC	1 cut(s)	930
Kpn2I	TCCGGA	1 cut(s)	298
KpnI	GGTACC	1 cut(s)	241
KspAI	GTTAAC	1 cut(s)	987
Kzo9I	GATC	4 cut(s)	28, 1014, 1156, 1231
LmnI	GCTCC	7 cut(s)	107, 188, 301, 881, 1090, 1183, 1207
Lsp1109I	GCAGC	4 cut(s)	111, 761, 994, 1297
LweI	GCATC	1 cut(s)	619
MaeI	CTAG	1 cut(s)	122
MaeII	ACGT	1 cut(s)	192
MaeIII	GTNAC	6 cut(s)	577, 595, 1094, 1268, 1294, 1301
MalI	GATC	4 cut(s)	30, 1016, 1158, 1233
MbiI	CCGCTC	1 cut(s)	304
MboI	GATC	4 cut(s)	28, 1014, 1156, 1231
MboII	GAAGA	5 cut(s)	9, 81, 470, 545, 1269
MflI	RGATCY	1 cut(s)	1156
MhlI	GDGCHC	6 cut(s)	185, 415, 670, 1180, 1377, 1390
MlyI	GAGTC	2 cut(s)	14, 106
MmeI	TCCRAC	3 cut(s)	791, 1205, 1303
Mph1103I	ATGCAT	1 cut(s)	788
MroI	TCCGGA	1 cut(s)	298
MroXI	GAANNNNTTC	4 cut(s)	136, 378, 563, 588
MseI	TTAA	2 cut(s)	986, 1241
MslI	CAYNNNNRTG	2 cut(s)	246, 1029
MspA1I	CMGCKG	2 cut(s)	234, 1448
MspI	CCGG	4 cut(s)	259, 299, 402, 1384
MspR9I	CCNGG	5 cut(s)	403, 422, 981, 1161, 1385
Mva1269I	GAATGC	1 cut(s)	884
MvaI	CCWGG	3 cut(s)	422, 981, 1161
MvnI	CGCG	1 cut(s)	179
MwoI	GCNNNNNNNGC	1 cut(s)	1199
NciI	CCSGG	2 cut(s)	403, 1385
NcoI	CCATGG	2 cut(s)	1055, 1334
NdeII	GATC	4 cut(s)	28, 1014, 1156, 1231
NlaIII	CATG	6 cut(s)	328, 790, 1059, 1132, 1309, 1338
NlaIV	GGNNCC	5 cut(s)	239, 427, 619, 1158, 1431
NmuCI	GTSAC	2 cut(s)	577, 595
NotI	GCGGCCGC	1 cut(s)	174
NsiI	ATGCAT	1 cut(s)	788
NspI	RCATGY	1 cut(s)	790
NspV	TTCGAA	2 cut(s)	130, 220
OliI	CACNNNNGTG	1 cut(s)	1029
PcsI	WCGNNNNNNNCGW	1 cut(s)	217
PctI	GAATGC	1 cut(s)	884
PdmI	GAANNNNTTC	4 cut(s)	136, 378, 563, 588
PfeI	GAWTC	6 cut(s)	208, 295, 340, 461, 992, 1217
PflMI	CCANNNNNTGG	2 cut(s)	698, 1061
PkrI	GCNGC	6 cut(s)	101, 175, 178, 751, 1009, 1312
PleI	GAGTC	2 cut(s)	13, 106
PpsI	GAGTC	2 cut(s)	13, 106
PshAI	GACNNNNGTC	1 cut(s)	404
Psp124BI	GAGCTC	1 cut(s)	185
Psp6I	CCWGG	3 cut(s)	420, 979, 1159
PspFI	CCCAGC	1 cut(s)	672
PspGI	CCWGG	3 cut(s)	420, 979, 1159
PspN4I	GGNNCC	5 cut(s)	239, 427, 619, 1158, 1431
PspPI	GGNCC	2 cut(s)	389, 1331
PstI	CTGCAG	3 cut(s)	739, 1114, 1315
PstNI	CAGNNNCTG	1 cut(s)	1193
PsuI	RGATCY	1 cut(s)	1156
RseI	CAYNNNNRTG	2 cut(s)	246, 1029
SacI	GAGCTC	1 cut(s)	185
SalI	GTCGAC	1 cut(s)	397
SaqAI	TTAA	2 cut(s)	986, 1241
SatI	GCNGC	6 cut(s)	100, 174, 177, 750, 1008, 1311
Sau3AI	GATC	4 cut(s)	28, 1014, 1156, 1231
Sau96I	GGNCC	2 cut(s)	389, 1331
ScaI	AGTACT	2 cut(s)	452, 1345
SchI	GAGTC	2 cut(s)	14, 106
ScrFI	CCNGG	5 cut(s)	403, 422, 981, 1161, 1385
SduI	GDGCHC	6 cut(s)	185, 415, 670, 1180, 1377, 1390
SfaNI	GCATC	1 cut(s)	619
SfcI	CTRYAG	4 cut(s)	735, 1110, 1311, 1454
SfuI	TTCGAA	2 cut(s)	130, 220
SinI	GGWCC	1 cut(s)	1331
SmiMI	CAYNNNNRTG	2 cut(s)	246, 1029
SmlI	CTYRAG	2 cut(s)	52, 106
SmoI	CTYRAG	2 cut(s)	52, 106
SsiI	CCGC	7 cut(s)	173, 177, 234, 304, 688, 960, 1446
SspMI	CTAG	1 cut(s)	122
SstI	GAGCTC	1 cut(s)	185
StyD4I	CCNGG	5 cut(s)	401, 420, 979, 1159, 1383
StyI	CCWWGG	4 cut(s)	392, 1055, 1088, 1334
TaaI	ACNGT	4 cut(s)	145, 658, 683, 827
TaiI	ACGT	1 cut(s)	195
TaqI	TCGA	6 cut(s)	130, 211, 220, 246, 398, 567
TatI	WGTACW	5 cut(s)	327, 438, 450, 1343, 1419
TauI	GCSGC	2 cut(s)	176, 179
TfiI	GAWTC	6 cut(s)	208, 295, 340, 461, 992, 1217
Tru1I	TTAA	2 cut(s)	986, 1241
Tru9I	TTAA	2 cut(s)	986, 1241
TscAI	CASTG	3 cut(s)	27, 366, 917
TseFI	GTSAC	2 cut(s)	577, 595
TseI	GCWGC	4 cut(s)	99, 749, 1007, 1310
Tsp45I	GTSAC	2 cut(s)	577, 595
TspDTI	ATGAA	3 cut(s)	313, 1059, 1134
TspGWI	ACGGA	2 cut(s)	175, 322
TspRI	CASTG	3 cut(s)	27, 366, 917
Van91I	CCANNNNNTGG	2 cut(s)	698, 1061
VpaK11BI	GGWCC	1 cut(s)	1331
XapI	RAATTY	3 cut(s)	263, 563, 1046
XceI	RCATGY	1 cut(s)	790
XcmI	CCANNNNNNNNNTGG	2 cut(s)	669, 699
XmiI	GTMKAC	3 cut(s)	189, 398, 731
XmnI	GAANNNNTTC	4 cut(s)	136, 378, 563, 588
XspI	CTAG	1 cut(s)	122
ZrmI	AGTACT	2 cut(s)	452, 1345
Zsp2I	ATGCAT	1 cut(s)	788

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.