Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0011390

Physical Location & Seq

Genomic Coordinates Reverse (-)

49687305 .. 49691026

Gene Structure 3722 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0346200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1716 bp

ATGTCAAATATTACAGGTGATATTGAAGAAGGTAGCTTCTCCTCTGGGAACACAGCCGGGGAAGAAGTTCATCAAGAAAAGCAGCTGCAAAATCACTTGCATGGCTCCAACTCCGGTGGAGGTTCCGGCGGGGGGAGGAGTAACAGCAATGGCTCTGTCACTACCCAACAGCAACAGCAGCAGCCAACCAAGAAGAAGAGAAACCTTCCCGGAACTCCAGATCCGAGTGCAGAAGTTATTGCTCTATCACCAACGACTCTAATGGCGACGAACCGATTTGTGTGTGAGATCTGCAACAAAGGGTTTCAGAGAGACCAGAACCTTCAGCTTCACAGGCGAGGCCATAACCTTCCATGGAAGCTGAGGCAAAGAACCAGCACTGAGGTTAGGAAAAGGGTTTACATATGCCCTGAGCCAACCTGCGTCCACCACAACCCGGCTCGTGCTTTAGGAGATCTTACTGGCATTAAAAAGCACTTTAGCCGAAAACACGGTGAGAAAAAGTGGAAATGTGACAAGTGCTCCAAGAAATATGCAGTGCAGTCAGACTGGAAGGCTCATCAGAAGACTTGCGGCACTAGGGAATACAAATGTGATTGTGGAACCATCTTTTCCAGGAGAGATAGCTTTATCACCCACAGAGCCTTCTGTGACGCATTGGCAGAAGAAAACAACAAAGTAAACCACGGACTCATAATGAACAACAACATGGGGACCCATAACCAAATGCCTGATCACCTCATCTCCTCCATGCCGGTGAACACCAACACCTCAATGGGAATCGGAGCTGGAGCAATCTCCGAATACAACAACTACGACCCGAAAAACCCTATGAAATCCCTCCCGGAGGATCTTGTCCCAATGCCGTTCAAGTCCATCATGAACACCAATCTCCCAGCCGGAGGAGGAATGTTTTCCAGCAGCTCCGGCTCGCTTTTCGGCTGCCCTAGAAGTGTCAACTCCTCCACCTCCTCCAACCTCCAGCTCAGCTCCAACAACAGCTCCTCCGCCGGGTTCAACTACCTTCAAGACAGCAAAAACGGGTGCGGTGGAAGCCCTAATATAACAGGTTCGGCTCAAATGTCAGCCACTGCTTTGCTCCAGAAGGCAGCTCAAATGGGCGCCACCGCCAGCAACACTACTATAAACTCCCCCATGATGCAGAAGAGCTTCGTCACCAGCATGGCGGGCCCGGAGAACCACCACCTTCTCTCCACCAACTCAATCAGCAACGTCACTCGACCGCCGTACGATCACCACCCTCACTTCCAGCAAGTCCAACAACAGCTGCCAGATCACCACCAGATGGTTGGGATGCACGGCTTCACCAACCAGCTCTTCGGTGACGCAAACGCCACTTCAGCTGCCAGCTCGGCGGCGATGAGTGACCACATGGGGATGTTCAGTCAGGTGGTGTTTAACATGGGGAGTGGAGGCAGTCACGAGCAGAACCAGGCGTTGCTGAGGAACTTGGAGCAGCAGAGGTTCGGAGGGAGCGGCGGCGAAGGAGGGGATATGACTACGCTTGATCTCTTGGGGCTCGGCGGAGGAGGAGGAGCGAGGCCTCAGCCGCAGAATTTGCATGAGCAACATCAGCAGAGGTTGGACTTGGAAGCGATGAGCCAGCCGAGAATGCCAATGATGAACCCCTTCCACCAGCAACAGCAGCGCTCGCATGGCGACTCGCCGGTGGAAAGCAACCCGTTTGGAATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006631 GO:0006720 GO:0006721 GO:0006725 GO:0006766 GO:0006775 GO:0006778 GO:0006807 GO:0006810 GO:0006950 GO:0006970 GO:0006979 GO:0008150 GO:0008152 GO:0008643 GO:0009058 GO:0009110 GO:0009266 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009528 GO:0009532 GO:0009534 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009642 GO:0009644 GO:0009651 GO:0009706 GO:0009915 GO:0009941 GO:0009975 GO:0009976 GO:0009987 GO:0010189 GO:0010232 GO:0010233 GO:0010287 GO:0015766 GO:0015770 GO:0015772 GO:0015994 GO:0016020 GO:0016108 GO:0016116 GO:0016122 GO:0018130 GO:0019752 GO:0019866 GO:0031090 GO:0031347 GO:0031967 GO:0031969 GO:0031975 GO:0031976 GO:0031984 GO:0032501 GO:0032787 GO:0033013 GO:0042170 GO:0042360 GO:0042362 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048583 GO:0050789 GO:0050896 GO:0051179 GO:0051186 GO:0051234 GO:0065007 GO:0071702 GO:0071704 GO:0080134 GO:1901360 GO:1901362 GO:1901564 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00130 ko01100 ko01110 map00130 map01100 map01110

Pfam Domains

Protein Families

Tocopherol_cycl

Protein Analysis

571

Amino Acids

62.05

Weight (kDa)

8.75

Isoelectric Point (pI)

55.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2H2-2nd_BIRD-IDD	PF22996	130 - 164	6.6e-23	BIRD-IDD transcription factor, second C2H2 zinc finger
C2CH-3rd_BIRD-IDD	PF22995	168 - 192	8.1e-14	BIRD-IDD transcription factor, third C2HC zinc finger
C2CH-4th_BIRD-IDD	PF22992	195 - 234	1.4e-24	BIRD-IDD transcription factor, fourth C2HC zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011390)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32770
fragaria_vesca	FvH4_2g35770 FvH4_2g35770 FvH4_2g35770 FvH4_2g35770
malus_domestica	MD08G1115600.v1.1 MD15G1095400.v1.1
prunus_persica	Prupe.1G450300_v2.0.a1
pyrus_communis	pycom15g08780
rosa_chinensis	RchiOBHm_Chr6g0306001
rosa_laevigata	RLG00000010833
rosa_multiflora	Rmu_sc0020534.1_g000002
rosa_roxburghii	Rroxscaffold_7G00162140
rosa_rugosa	Rorug06G0346200 Rorug06G0346300
rosa_samantha	Rh6AG458000 Rh6BG442800 Rh6CG472500 Rh6DG458700
rosa_wichuraiana	Rw6G039950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	428
AccB1I	GGYRCC	1 cut(s)	1121
AccB7I	CCANNNNNTGG	1 cut(s)	1306
AccBSI	CCGCTC	1 cut(s)	1497
AclWI	GGATC	2 cut(s)	215, 858
AcsI	RAATTY	1 cut(s)	1576
AcuI	CTGAAG	2 cut(s)	308, 1344
AcyI	GRCGYC	1 cut(s)	1122
AfaI	GTAC	1 cut(s)	1250
AfeI	AGCGCT	1 cut(s)	1670
AfiI	CCNNNNNNNGG	6 cut(s)	132, 436, 847, 902, 1011, 1306
AgsI	TTSAA	4 cut(s)	26, 871, 1018, 1028
AjnI	CCWGG	2 cut(s)	614, 1452
AjuI	GAANNNNNNNTTGG	2 cut(s)	1322, 1354
AloI	GAACNNNNNNTCC	2 cut(s)	205, 237
Alw21I	GWGCWC	1 cut(s)	524
Alw26I	GTCTC	1 cut(s)	306
AlwI	GGATC	2 cut(s)	215, 858
AlwNI	CAGNNNCTG	1 cut(s)	1091
Aor51HI	AGCGCT	1 cut(s)	1670
AoxI	GGCC	3 cut(s)	340, 1189, 1562
ApaI	GGGCCC	1 cut(s)	1193
ApoI	RAATTY	1 cut(s)	1576
Asp700I	GAANNNNTTC	4 cut(s)	66, 913, 1169, 1649
AspLEI	GCGC	2 cut(s)	1124, 1671
AspS9I	GGNCC	3 cut(s)	714, 1189, 1190
AsuC2I	CCSGG	6 cut(s)	58, 210, 437, 845, 1012, 1193
AvaII	GGWCC	1 cut(s)	714
BaeGI	GKGCMC	1 cut(s)	1193
BanI	GGYRCC	1 cut(s)	1121
BanII	GRGCYC	2 cut(s)	1193, 1542
BauI	CACGAG	2 cut(s)	441, 1442
BbsI	GAAGAC	1 cut(s)	572
Bbv12I	GWGCWC	1 cut(s)	524
BbvCI	CCTCAGC	3 cut(s)	362, 1463, 1566
BccI	CCATC	3 cut(s)	614, 884, 1300
BceAI	ACGGC	3 cut(s)	850, 1231, 1336
BciT130I	CCWGG	2 cut(s)	616, 1454
BclI	TGATCA	1 cut(s)	733
BcnI	CCSGG	6 cut(s)	58, 210, 437, 845, 1012, 1193
BcoDI	GTCTC	1 cut(s)	306
BfaI	CTAG	2 cut(s)	579, 948
BfoI	RGCGCY	2 cut(s)	1125, 1672
BfuAI	ACCTGC	1 cut(s)	428
BglI	GCCNNNNNGGC	1 cut(s)	1373
BglII	AGATCT	2 cut(s)	288, 454
BlpI	GCTNAGC	1 cut(s)	986
Bme1390I	CCNGG	8 cut(s)	58, 210, 437, 616, 845, 1012, 1193, 1454
Bme18I	GGWCC	1 cut(s)	714
BmgT120I	GGNCC	3 cut(s)	714, 1189, 1190
BmiI	GGNNCC	7 cut(s)	106, 124, 604, 715, 716, 1123, 1191
BmrFI	CCNGG	8 cut(s)	58, 210, 437, 616, 845, 1012, 1193, 1454
BmsI	GCATC	2 cut(s)	1149, 1305
BpiI	GAAGAC	1 cut(s)	572
BpmI	CTGGAG	4 cut(s)	201, 810, 965, 1085
Bpu10I	CCTNAGC	4 cut(s)	362, 411, 1463, 1566
Bpu1102I	GCTNAGC	1 cut(s)	986
BpuMI	CCSGG	6 cut(s)	58, 210, 437, 845, 1012, 1193
BsaHI	GRCGYC	1 cut(s)	1122
BsaI	GGTCTC	1 cut(s)	306
BsaJI	CCNNGG	3 cut(s)	57, 353, 685
BsaWI	WCCGGW	1 cut(s)	113
Bsc4I	CCNNNNNNNGG	6 cut(s)	132, 436, 847, 902, 1011, 1306
Bse118I	RCCGGY	2 cut(s)	754, 1687
Bse1I	ACTGG	2 cut(s)	466, 554
Bse3DI	GCAATG	1 cut(s)	154
BseBI	CCWGG	2 cut(s)	616, 1454
BseDI	CCNNGG	3 cut(s)	57, 353, 685
BseGI	GGATG	2 cut(s)	1320, 1404
BseLI	CCNNNNNNNGG	6 cut(s)	132, 436, 847, 902, 1011, 1306
BseMI	GCAATG	1 cut(s)	154
BseMII	CTCAG	6 cut(s)	353, 372, 402, 1000, 1454, 1580
BseNI	ACTGG	2 cut(s)	466, 554
BseSI	GKGCMC	1 cut(s)	1193
BseYI	CCCAGC	1 cut(s)	895
BsgI	GTGCAG	2 cut(s)	249, 560
Bsh1285I	CGRYCG	1 cut(s)	1244
BshFI	GGCC	3 cut(s)	342, 1191, 1564
BshNI	GGYRCC	1 cut(s)	1121
BsiEI	CGRYCG	1 cut(s)	1244
BsiHKAI	GWGCWC	1 cut(s)	524
BsiWI	CGTACG	1 cut(s)	1248
BslFI	GGGAC	2 cut(s)	727, 842
BslI	CCNNNNNNNGG	6 cut(s)	132, 436, 847, 902, 1011, 1306
BsmAI	GTCTC	1 cut(s)	306
BsmFI	GGGAC	2 cut(s)	727, 842
BsmI	GAATGC	1 cut(s)	1638
BsnI	GGCC	3 cut(s)	342, 1191, 1564
Bso31I	GGTCTC	1 cut(s)	306
Bsp120I	GGGCCC	1 cut(s)	1189
Bsp1286I	GDGCHC	3 cut(s)	524, 1193, 1542
Bsp143I	GATC	8 cut(s)	220, 288, 454, 733, 850, 1252, 1294, 1528
Bsp1720I	GCTNAGC	1 cut(s)	986
Bsp19I	CCATGG	1 cut(s)	353
BspANI	GGCC	3 cut(s)	342, 1191, 1564
BspCNI	CTCAG	6 cut(s)	354, 373, 403, 999, 1455, 1579
BspHI	TCATGA	1 cut(s)	879
BspLI	GGNNCC	7 cut(s)	106, 124, 604, 715, 716, 1123, 1191
BspMI	ACCTGC	1 cut(s)	428
BspPI	GGATC	2 cut(s)	215, 858
BspQI	GCTCTTC	2 cut(s)	1160, 1343
BspT107I	GGYRCC	1 cut(s)	1121
BspTNI	GGTCTC	1 cut(s)	306
BsrBI	CCGCTC	1 cut(s)	1497
BsrDI	GCAATG	1 cut(s)	154
BsrFI	RCCGGY	2 cut(s)	754, 1687
BsrI	ACTGG	2 cut(s)	466, 554
BssAI	RCCGGY	2 cut(s)	754, 1687
BssECI	CCNNGG	3 cut(s)	57, 353, 685
BssMI	GATC	8 cut(s)	220, 288, 454, 733, 850, 1252, 1294, 1528
BssNI	GRCGYC	1 cut(s)	1122
BssSI	CACGAG	2 cut(s)	441, 1442
BssT1I	CCWWGG	1 cut(s)	353
Bst2BI	CACGAG	2 cut(s)	441, 1442
Bst2UI	CCWGG	2 cut(s)	616, 1454
Bst4CI	ACNGT	1 cut(s)	494
Bst6I	CTCTTC	3 cut(s)	191, 1160, 1343
BstACI	GRCGYC	1 cut(s)	1122
BstAPI	GCANNNNNTGC	1 cut(s)	1579
BstC8I	GCNNGC	6 cut(s)	932, 1132, 1189, 1369, 1625, 1673
BstDEI	CTNAG	6 cut(s)	362, 381, 411, 986, 1463, 1566
BstDSI	CCRYGG	2 cut(s)	353, 685
BstENI	CCTNNNNNAGG	1 cut(s)	845
BstF5I	GGATG	2 cut(s)	1320, 1404
BstH2I	RGCGCY	2 cut(s)	1125, 1672
BstHHI	GCGC	2 cut(s)	1124, 1671
BstKTI	GATC	8 cut(s)	223, 291, 457, 736, 853, 1255, 1297, 1531
BstMAI	GTCTC	1 cut(s)	306
BstMBI	GATC	8 cut(s)	220, 288, 454, 733, 850, 1252, 1294, 1528
BstMCI	CGRYCG	1 cut(s)	1244
BstNI	CCWGG	2 cut(s)	616, 1454
BstSCI	CCNGG	8 cut(s)	56, 208, 435, 614, 843, 1010, 1191, 1452
BstSLI	GKGCMC	1 cut(s)	1193
BstV2I	GAAGAC	1 cut(s)	572
BstX2I	RGATCY	4 cut(s)	220, 288, 454, 850
BstXI	CCANNNNNNTGG	1 cut(s)	1310
BstYI	RGATCY	4 cut(s)	220, 288, 454, 850
BsuRI	GGCC	3 cut(s)	342, 1191, 1564
BtgI	CCRYGG	2 cut(s)	353, 685
BtgZI	GCGATG	2 cut(s)	1394, 1631
BtsCI	GGATG	2 cut(s)	1320, 1404
BtsI	GCAGTG	2 cut(s)	543, 1089
BtsIMutI	CAGTG	3 cut(s)	378, 543, 1089
BveI	ACCTGC	1 cut(s)	428
Cac8I	GCNNGC	6 cut(s)	932, 1132, 1189, 1369, 1625, 1673
CaiI	CAGNNNCTG	1 cut(s)	1091
CciI	TCATGA	1 cut(s)	879
CfoI	GCGC	2 cut(s)	1124, 1671
Cfr10I	RCCGGY	2 cut(s)	754, 1687
Cfr13I	GGNCC	3 cut(s)	714, 1189, 1190
CseI	GACGC	3 cut(s)	412, 662, 1355
Csp6I	GTAC	1 cut(s)	1249
CspCI	CAANNNNNGTGG	2 cut(s)	97, 132
CviQI	GTAC	1 cut(s)	1249
DdeI	CTNAG	6 cut(s)	362, 381, 411, 986, 1463, 1566
DinI	GGCGCC	1 cut(s)	1123
DpnI	GATC	8 cut(s)	222, 290, 456, 735, 852, 1254, 1296, 1530
DpnII	GATC	8 cut(s)	220, 288, 454, 733, 850, 1252, 1294, 1528
Eam1104I	CTCTTC	3 cut(s)	191, 1160, 1343
EarI	CTCTTC	3 cut(s)	191, 1160, 1343
EciI	GGCGGA	2 cut(s)	997, 1560
Eco130I	CCWWGG	1 cut(s)	353
Eco147I	AGGCCT	1 cut(s)	1564
Eco24I	GRGCYC	2 cut(s)	1193, 1542
Eco31I	GGTCTC	1 cut(s)	306
Eco47I	GGWCC	1 cut(s)	714
Eco47III	AGCGCT	1 cut(s)	1670
Eco57I	CTGAAG	2 cut(s)	308, 1344
EcoNI	CCTNNNNNAGG	1 cut(s)	845
EcoO109I	RGGNCCY	1 cut(s)	714
EcoRII	CCWGG	2 cut(s)	614, 1452
EcoT14I	CCWWGG	1 cut(s)	353
EcoT38I	GRGCYC	2 cut(s)	1193, 1542
EgeI	GGCGCC	1 cut(s)	1123
EheI	GGCGCC	1 cut(s)	1123
ErhI	CCWWGG	1 cut(s)	353
FaqI	GGGAC	2 cut(s)	727, 842
FauI	CCCGC	2 cut(s)	122, 1180
FauNDI	CATATG	1 cut(s)	404
FbaI	TGATCA	1 cut(s)	733
FokI	GGATG	2 cut(s)	1327, 1411
FriOI	GRGCYC	2 cut(s)	1193, 1542
FspBI	CTAG	2 cut(s)	579, 948
GlaI	GCGC	2 cut(s)	1123, 1670
GsaI	CCCAGC	1 cut(s)	899
GsuI	CTGGAG	4 cut(s)	201, 810, 965, 1085
HaeII	RGCGCY	2 cut(s)	1125, 1672
HaeIII	GGCC	3 cut(s)	342, 1191, 1564
HgaI	GACGC	3 cut(s)	412, 662, 1355
HhaI	GCGC	2 cut(s)	1124, 1671
Hin1I	GRCGYC	1 cut(s)	1122
Hin6I	GCGC	2 cut(s)	1122, 1669
HinP1I	GCGC	2 cut(s)	1122, 1669
HincII	GTYRAC	1 cut(s)	958
HindII	GTYRAC	1 cut(s)	958
HinfI	GANTC	4 cut(s)	256, 690, 780, 1682
Hpy166II	GTNNAC	5 cut(s)	400, 427, 682, 760, 958
Hpy188I	TCNGA	7 cut(s)	225, 309, 547, 564, 785, 802, 1490
Hpy188III	TCNNGA	6 cut(s)	74, 218, 880, 1028, 1102, 1442
Hpy8I	GTNNAC	5 cut(s)	400, 427, 682, 760, 958
Hpy99I	CGWCG	1 cut(s)	271
HpyCH4III	ACNGT	1 cut(s)	494
HpyCH4IV	ACGT	1 cut(s)	1233
HpyCH4V	TGCA	9 cut(s)	88, 100, 230, 294, 536, 541, 1162, 1318, 1582
HpyF3I	CTNAG	6 cut(s)	362, 381, 411, 986, 1463, 1566
HpySE526I	ACGT	1 cut(s)	1233
Hsp92I	GRCGYC	1 cut(s)	1122
HspAI	GCGC	2 cut(s)	1122, 1669
KasI	GGCGCC	1 cut(s)	1121
KflI	GGGWCCC	1 cut(s)	714
Ksp22I	TGATCA	1 cut(s)	733
Kzo9I	GATC	8 cut(s)	220, 288, 454, 733, 850, 1252, 1294, 1528
LguI	GCTCTTC	2 cut(s)	1160, 1343
LweI	GCATC	2 cut(s)	1149, 1305
MaeI	CTAG	2 cut(s)	579, 948
MaeII	ACGT	1 cut(s)	1233
MaeIII	GTNAC	9 cut(s)	140, 157, 512, 650, 1174, 1234, 1343, 1385, 1439
MalI	GATC	8 cut(s)	222, 290, 456, 735, 852, 1254, 1296, 1530
MbiI	CCGCTC	1 cut(s)	1497
MboI	GATC	8 cut(s)	220, 288, 454, 733, 850, 1252, 1294, 1528
MboII	GAAGA	8 cut(s)	38, 74, 205, 208, 577, 677, 1177, 1330
MflI	RGATCY	4 cut(s)	220, 288, 454, 850
MhlI	GDGCHC	3 cut(s)	524, 1193, 1542
MluCI	AATT	1 cut(s)	1576
Mly113I	GGCGCC	1 cut(s)	1122
MlyI	GAGTC	3 cut(s)	250, 684, 1676
MmeI	TCCRAC	5 cut(s)	132, 999, 1017, 1303, 1584
MroXI	GAANNNNTTC	4 cut(s)	66, 913, 1169, 1649
MseI	TTAA	2 cut(s)	468, 1419
MslI	CAYNNNNRTG	5 cut(s)	99, 755, 773, 1181, 1397
MspA1I	CMGCKG	3 cut(s)	85, 1288, 1364
MspR9I	CCNGG	8 cut(s)	58, 210, 437, 616, 845, 1012, 1193, 1454
Mva1269I	GAATGC	1 cut(s)	1638
MvaI	CCWGG	2 cut(s)	616, 1454
NarI	GGCGCC	1 cut(s)	1122
NciI	CCSGG	6 cut(s)	58, 210, 437, 845, 1012, 1193
NcoI	CCATGG	1 cut(s)	353
NdeI	CATATG	1 cut(s)	404
NdeII	GATC	8 cut(s)	220, 288, 454, 733, 850, 1252, 1294, 1528
NlaIV	GGNNCC	7 cut(s)	106, 124, 604, 715, 716, 1123, 1191
NmeAIII	GCCGAG	3 cut(s)	1352, 1521, 1653
NmuCI	GTSAC	8 cut(s)	157, 512, 650, 1174, 1234, 1343, 1385, 1439
PagI	TCATGA	1 cut(s)	879
PceI	AGGCCT	1 cut(s)	1564
PciSI	GCTCTTC	2 cut(s)	1160, 1343
PctI	GAATGC	1 cut(s)	1638
PdmI	GAANNNNTTC	4 cut(s)	66, 913, 1169, 1649
PfeI	GAWTC	1 cut(s)	780
Pfl23II	CGTACG	1 cut(s)	1248
PflMI	CCANNNNNTGG	1 cut(s)	1306
PfoI	TCCNGGA	3 cut(s)	208, 614, 843
PleI	GAGTC	3 cut(s)	250, 684, 1676
PluTI	GGCGCC	1 cut(s)	1125
PpsI	GAGTC	3 cut(s)	250, 684, 1676
PpuMI	RGGWCCY	1 cut(s)	714
Psp5II	RGGWCCY	1 cut(s)	714
Psp6I	CCWGG	2 cut(s)	614, 1452
PspFI	CCCAGC	1 cut(s)	895
PspGI	CCWGG	2 cut(s)	614, 1452
PspLI	CGTACG	1 cut(s)	1248
PspN4I	GGNNCC	7 cut(s)	106, 124, 604, 715, 716, 1123, 1191
PspOMI	GGGCCC	1 cut(s)	1189
PspPI	GGNCC	3 cut(s)	714, 1189, 1190
PspPPI	RGGWCCY	1 cut(s)	714
PstNI	CAGNNNCTG	1 cut(s)	1091
PsuI	RGATCY	4 cut(s)	220, 288, 454, 850
PvuII	CAGCTG	3 cut(s)	85, 1288, 1364
RsaI	GTAC	1 cut(s)	1250
RsaNI	GTAC	1 cut(s)	1249
RseI	CAYNNNNRTG	5 cut(s)	99, 755, 773, 1181, 1397
SapI	GCTCTTC	2 cut(s)	1160, 1343
SaqAI	TTAA	2 cut(s)	468, 1419
Sau3AI	GATC	8 cut(s)	220, 288, 454, 733, 850, 1252, 1294, 1528
Sau96I	GGNCC	3 cut(s)	714, 1189, 1190
SchI	GAGTC	3 cut(s)	250, 684, 1676
ScrFI	CCNGG	8 cut(s)	58, 210, 437, 616, 845, 1012, 1193, 1454
SduI	GDGCHC	3 cut(s)	524, 1193, 1542
SfaNI	GCATC	2 cut(s)	1149, 1305
SfoI	GGCGCC	1 cut(s)	1123
SgrAI	CRCCGGYG	1 cut(s)	1687
SinI	GGWCC	1 cut(s)	714
SmiMI	CAYNNNNRTG	5 cut(s)	99, 755, 773, 1181, 1397
Sse9I	AATT	1 cut(s)	1576
SseBI	AGGCCT	1 cut(s)	1564
SspDI	GGCGCC	1 cut(s)	1121
SspI	AATATT	1 cut(s)	10
SspMI	CTAG	2 cut(s)	579, 948
StuI	AGGCCT	1 cut(s)	1564
StyD4I	CCNGG	8 cut(s)	56, 208, 435, 614, 843, 1010, 1191, 1452
StyI	CCWWGG	1 cut(s)	353
TaaI	ACNGT	1 cut(s)	494
TaiI	ACGT	1 cut(s)	1236
TaqI	TCGA	1 cut(s)	1240
TasI	AATT	1 cut(s)	1576
TauI	GCSGC	5 cut(s)	576, 1379, 1500, 1503, 1573
TfiI	GAWTC	1 cut(s)	780
Tru1I	TTAA	2 cut(s)	468, 1419
Tru9I	TTAA	2 cut(s)	468, 1419
TscAI	CASTG	3 cut(s)	385, 543, 1096
TseFI	GTSAC	8 cut(s)	157, 512, 650, 1174, 1234, 1343, 1385, 1439
Tsp45I	GTSAC	8 cut(s)	157, 512, 650, 1174, 1234, 1343, 1385, 1439
TspDTI	ATGAA	5 cut(s)	59, 713, 848, 896, 1658
TspGWI	ACGGA	1 cut(s)	702
TspRI	CASTG	3 cut(s)	385, 543, 1096
Van91I	CCANNNNNTGG	1 cut(s)	1306
VpaK11BI	GGWCC	1 cut(s)	714
XagI	CCTNNNNNAGG	1 cut(s)	845
XapI	RAATTY	1 cut(s)	1576
XcmI	CCANNNNNNNNNTGG	2 cut(s)	772, 1307
XmnI	GAANNNNTTC	4 cut(s)	66, 913, 1169, 1649
XspI	CTAG	2 cut(s)	579, 948

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.