Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0011390

Physical Location & Seq

Genomic Coordinates Forward (+)

64147112 .. 64152842

Gene Structure 5731 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG458000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1209 bp

ATGGAATCGAGTCTGTCTTCACTGCACGAGCCTCACCATTTCTCTCATAACCTAACCTTTCGATCCCTAAACCCCATACTGAATCGCCGGAATCTCAACCTGGGGTTTCGAACCAATTCCACCGTCTCCGTTTCCGTCTCCAGCTCAATCTCCAAAACCGAGCCGATCACCTCCTCCACACCCGAACCGGCCGCGAGCCCGGTCTACACTCCCACACCTCCGAACCGGGACCTCCGGACCCCTCACAGCGGGTATCATTTCGATGGAACTGCTCGGAAATTCTTTGAGGGATGGTACTTCAAGGTTTCGATTCCTGAGCGGAGGCAGAGCTTTTGCTTTATGTACTCCGTCGAGAATCCGGCGTTCCGTAAGAGACTGACGCCGTTAGAGTTGGCTCAGCACGGACCTAGAACCACCGGAGTCGGAGCTCAGATTCTCGGCGCGGATGACAAGTACATTTGCCAATACAGTGAAGAATCTAGAAACTTTTGGGGAAGTAGGCATGAGCTTATGTTGGGGAATACTTTTGTCGCACAAAAACAATCGAAGCCTCCAAACAAGGAGGTTCCTCCTCAGGAATTCAATAAGAGAGTAGTGGAAGGTTTTCAAGTAACTCCACTTTGGCACCAGGGTATTATTCATGATGATGGCAGGACAAATTATGCGGAAACTGTGCCGACCGCACGTTGGGAATACAGTACCCGTCCAATTTTTGGGTGGGGTGATGTTGGCTCCAAGCAGAAGCCTACTGCTGGATGGTTAGCAGCTTTTCCCGTATTTGAACCCCATTGGCAAATATGCATGGCTGGTGGATTGTCAACAGGTTGGATAGAGTGGGATGGTGAAAGATATGAGTTTCAAGATGCCCCTTCTTATTCTGAAAAGAACTGGGGTGGAGCATTCCCAAGAAAATGGTTCTGGGTCCAGTGTAATGTTTTTGAAGGGGCTAGTGGAGAAGTTGCTCTTACTGCAGGTGGTGGGTTGAGGCAAATACCTGGGTTATCAGAGACTTTTGAAAACGCTGCCCTGATTGGAGTTCACTGTGGTGGAAAGTTTTATGAATTTGTACCATGGAATGGTGTTGTTAGTTGGGAAATCGCTACTTGGGGTTATTGGTCCATGGCTGCAGAGAATGAGACGCATATGGTAATTGAATATCTCATTTATTGTATCCTTCTATGTGGTAGTAACAAGAGTTTCATCCCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006631 GO:0006720 GO:0006721 GO:0006725 GO:0006766 GO:0006775 GO:0006778 GO:0006807 GO:0006810 GO:0006950 GO:0006970 GO:0006979 GO:0008150 GO:0008152 GO:0008643 GO:0009058 GO:0009110 GO:0009266 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009528 GO:0009532 GO:0009534 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009642 GO:0009644 GO:0009651 GO:0009706 GO:0009915 GO:0009941 GO:0009975 GO:0009976 GO:0009987 GO:0010189 GO:0010232 GO:0010233 GO:0010287 GO:0015766 GO:0015770 GO:0015772 GO:0015994 GO:0016020 GO:0016108 GO:0016116 GO:0016122 GO:0018130 GO:0019752 GO:0019866 GO:0031090 GO:0031347 GO:0031967 GO:0031969 GO:0031975 GO:0031976 GO:0031984 GO:0032501 GO:0032787 GO:0033013 GO:0042170 GO:0042360 GO:0042362 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048583 GO:0050789 GO:0050896 GO:0051179 GO:0051186 GO:0051234 GO:0065007 GO:0071702 GO:0071704 GO:0080134 GO:1901360 GO:1901362 GO:1901564 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00130 ko01100 ko01110 map00130 map01100 map01110

Pfam Domains

Protein Families

Tocopherol_cycl

Protein Analysis

402

Amino Acids

45.45

Weight (kDa)

6.51

Isoelectric Point (pI)

46.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Tocopherol_cycl	PF14249	92 - 383	6e-121	Tocopherol cyclase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0011390)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32770
fragaria_vesca	FvH4_2g35770 FvH4_2g35770 FvH4_2g35770 FvH4_2g35770
malus_domestica	MD08G1115600.v1.1 MD15G1095400.v1.1
prunus_persica	Prupe.1G450300_v2.0.a1
pyrus_communis	pycom15g08780
rosa_chinensis	RchiOBHm_Chr6g0306001
rosa_laevigata	RLG00000010833
rosa_multiflora	Rmu_sc0020534.1_g000002
rosa_roxburghii	Rroxscaffold_7G00162140
rosa_rugosa	Rorug06G0346200 Rorug06G0346300
rosa_samantha	Rh6AG458000 Rh6BG442800 Rh6CG472500 Rh6DG458700
rosa_wichuraiana	Rw6G039950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	962
Acc36I	ACCTGC	1 cut(s)	962
AccB1I	GGYRCC	1 cut(s)	624
AccB7I	CCANNNNNTGG	2 cut(s)	713, 1076
AccBSI	CCGCTC	1 cut(s)	319
AccI	GTMKAC	1 cut(s)	204
AccII	CGCG	2 cut(s)	194, 443
AccIII	TCCGGA	1 cut(s)	234
AciI	CCGC	6 cut(s)	192, 249, 319, 443, 665, 681
AclWI	GGATC	1 cut(s)	57
AcoI	YGGCCR	1 cut(s)	189
AcsI	RAATTY	3 cut(s)	278, 578, 1061
AcyI	GRCGYC	1 cut(s)	380
AfaI	GTAC	5 cut(s)	296, 344, 455, 700, 1068
AfiI	CCNNNNNNNGG	5 cut(s)	248, 687, 713, 752, 1076
AgsI	TTSAA	8 cut(s)	301, 583, 608, 782, 860, 941, 1016, 1154
AjnI	CCWGG	3 cut(s)	99, 627, 994
AleI	CACNNNNGTG	1 cut(s)	1044
AluBI	AGCT	5 cut(s)	144, 330, 428, 508, 767
AluI	AGCT	5 cut(s)	144, 330, 428, 508, 767
Alw21I	GWGCWC	1 cut(s)	430
Alw26I	GTCTC	5 cut(s)	130, 142, 367, 1001, 1130
AlwI	GGATC	1 cut(s)	57
Aor13HI	TCCGGA	1 cut(s)	234
AoxI	GGCC	1 cut(s)	189
ApeKI	GCWGC	3 cut(s)	764, 1022, 1124
ApoI	RAATTY	3 cut(s)	278, 578, 1061
Asp700I	GAANNNNTTC	2 cut(s)	115, 603
AspLEI	GCGC	1 cut(s)	443
AspS9I	GGNCC	5 cut(s)	229, 237, 404, 922, 1116
AsuC2I	CCSGG	2 cut(s)	200, 227
AsuHPI	GGTGA	4 cut(s)	26, 160, 734, 854
AsuII	TTCGAA	1 cut(s)	109
AvaII	GGWCC	5 cut(s)	229, 237, 404, 922, 1116
AxyI	CCTNAGG	1 cut(s)	573
BanI	GGYRCC	1 cut(s)	624
BanII	GRGCYC	2 cut(s)	200, 430
BauI	CACGAG	1 cut(s)	26
BbsI	GAAGAC	1 cut(s)	9
Bbv12I	GWGCWC	1 cut(s)	430
BbvI	GCAGC	3 cut(s)	776, 1009, 1111
BccI	CCATC	5 cut(s)	257, 285, 641, 750, 833
BceAI	ACGGC	1 cut(s)	367
BcgI	CGANNNNNNTGC	2 cut(s)	251, 285
BciT130I	CCWGG	3 cut(s)	101, 629, 996
BciVI	GTATCC	1 cut(s)	1181
BcnI	CCSGG	2 cut(s)	200, 227
BcoDI	GTCTC	5 cut(s)	130, 142, 367, 1001, 1130
BfaI	CTAG	3 cut(s)	408, 480, 948
BfmI	CTRYAG	2 cut(s)	969, 1125
BfuAI	ACCTGC	1 cut(s)	962
BfuI	GTATCC	1 cut(s)	1181
BisI	GCNGC	4 cut(s)	192, 765, 1023, 1125
BlpI	GCTNAGC	1 cut(s)	396
BlsI	GCNGC	4 cut(s)	193, 766, 1024, 1126
Bme1390I	CCNGG	5 cut(s)	101, 200, 227, 629, 996
Bme18I	GGWCC	5 cut(s)	229, 237, 404, 922, 1116
BmgT120I	GGNCC	5 cut(s)	229, 237, 404, 922, 1116
BmiI	GGNNCC	6 cut(s)	230, 239, 567, 626, 733, 923
BmrFI	CCNGG	5 cut(s)	101, 200, 227, 629, 996
BmrI	ACTGGG	1 cut(s)	898
BmsI	GCATC	1 cut(s)	853
BmuI	ACTGGG	1 cut(s)	898
BpiI	GAAGAC	1 cut(s)	9
BpmI	CTGGAG	1 cut(s)	124
Bpu10I	CCTNAGC	1 cut(s)	315
Bpu1102I	GCTNAGC	1 cut(s)	396
Bpu14I	TTCGAA	1 cut(s)	109
BpuMI	CCSGG	2 cut(s)	200, 227
BsaHI	GRCGYC	1 cut(s)	380
BsaJI	CCNNGG	5 cut(s)	100, 628, 995, 1070, 1119
BsaWI	WCCGGW	2 cut(s)	234, 416
Bsc4I	CCNNNNNNNGG	5 cut(s)	248, 687, 713, 752, 1076
Bse118I	RCCGGY	1 cut(s)	187
Bse1I	ACTGG	2 cut(s)	893, 925
Bse21I	CCTNAGG	1 cut(s)	573
BseAI	TCCGGA	1 cut(s)	234
BseBI	CCWGG	3 cut(s)	101, 629, 996
BseDI	CCNNGG	5 cut(s)	100, 628, 995, 1070, 1119
BseGI	GGATG	5 cut(s)	296, 451, 761, 844, 1200
BseLI	CCNNNNNNNGG	5 cut(s)	248, 687, 713, 752, 1076
BseMII	CTCAG	4 cut(s)	306, 410, 443, 587
BseNI	ACTGG	2 cut(s)	893, 925
BseRI	GAGGAG	2 cut(s)	163, 561
BseX3I	CGGCCG	1 cut(s)	189
BseXI	GCAGC	3 cut(s)	776, 1009, 1111
BsgI	GTGCAG	1 cut(s)	8
Bsh1236I	CGCG	2 cut(s)	194, 443
Bsh1285I	CGRYCG	2 cut(s)	192, 681
BshFI	GGCC	1 cut(s)	191
BshNI	GGYRCC	1 cut(s)	624
BsiEI	CGRYCG	2 cut(s)	192, 681
BsiHKAI	GWGCWC	1 cut(s)	430
BsiSI	CCGG	7 cut(s)	88, 188, 200, 226, 235, 359, 417
BslFI	GGGAC	1 cut(s)	242
BslI	CCNNNNNNNGG	5 cut(s)	248, 687, 713, 752, 1076
BsmAI	GTCTC	5 cut(s)	130, 142, 367, 1001, 1130
BsmBI	CGTCTC	3 cut(s)	130, 142, 1130
BsmFI	GGGAC	1 cut(s)	242
BsmI	GAATGC	1 cut(s)	899
BsnI	GGCC	1 cut(s)	191
Bsp119I	TTCGAA	1 cut(s)	109
Bsp1286I	GDGCHC	2 cut(s)	200, 430
Bsp13I	TCCGGA	1 cut(s)	234
Bsp143I	GATC	2 cut(s)	62, 165
Bsp1720I	GCTNAGC	1 cut(s)	396
Bsp19I	CCATGG	2 cut(s)	1070, 1119
BspACI	CCGC	6 cut(s)	192, 249, 319, 443, 665, 681
BspANI	GGCC	1 cut(s)	191
BspCNI	CTCAG	4 cut(s)	307, 409, 442, 586
BspEI	TCCGGA	1 cut(s)	234
BspFNI	CGCG	2 cut(s)	194, 443
BspHI	TCATGA	1 cut(s)	640
BspLI	GGNNCC	6 cut(s)	230, 239, 567, 626, 733, 923
BspMAI	CTGCAG	2 cut(s)	973, 1129
BspMI	ACCTGC	1 cut(s)	962
BspPI	GGATC	1 cut(s)	57
BspT104I	TTCGAA	1 cut(s)	109
BspT107I	GGYRCC	1 cut(s)	624
BsrBI	CCGCTC	1 cut(s)	319
BsrFI	RCCGGY	1 cut(s)	187
BsrI	ACTGG	2 cut(s)	893, 925
BssAI	RCCGGY	1 cut(s)	187
BssECI	CCNNGG	5 cut(s)	100, 628, 995, 1070, 1119
BssMI	GATC	2 cut(s)	62, 165
BssNI	GRCGYC	1 cut(s)	380
BssSI	CACGAG	1 cut(s)	26
BssT1I	CCWWGG	2 cut(s)	1070, 1119
Bst2BI	CACGAG	1 cut(s)	26
Bst2UI	CCWGG	3 cut(s)	101, 629, 996
Bst4CI	ACNGT	5 cut(s)	124, 470, 673, 698, 1043
BstACI	GRCGYC	1 cut(s)	380
BstBI	TTCGAA	1 cut(s)	109
BstC8I	GCNNGC	1 cut(s)	196
BstDEI	CTNAG	4 cut(s)	315, 396, 429, 573
BstDSI	CCRYGG	2 cut(s)	1070, 1119
BstF5I	GGATG	5 cut(s)	296, 451, 761, 844, 1200
BstFNI	CGCG	2 cut(s)	194, 443
BstHHI	GCGC	1 cut(s)	443
BstKTI	GATC	2 cut(s)	65, 168
BstMAI	GTCTC	5 cut(s)	130, 142, 367, 1001, 1130
BstMBI	GATC	2 cut(s)	62, 165
BstMCI	CGRYCG	2 cut(s)	192, 681
BstMWI	GCNNNNNNNGC	1 cut(s)	968
BstNI	CCWGG	3 cut(s)	101, 629, 996
BstSCI	CCNGG	5 cut(s)	99, 198, 225, 627, 994
BstSFI	CTRYAG	2 cut(s)	969, 1125
BstUI	CGCG	2 cut(s)	194, 443
BstV1I	GCAGC	3 cut(s)	776, 1009, 1111
BstV2I	GAAGAC	1 cut(s)	9
BstXI	CCANNNNNNTGG	1 cut(s)	912
BstZI	CGGCCG	1 cut(s)	189
Bsu36I	CCTNAGG	1 cut(s)	573
BsuI	GTATCC	1 cut(s)	1181
BsuRI	GGCC	1 cut(s)	191
BtgI	CCRYGG	2 cut(s)	1070, 1119
BtsCI	GGATG	5 cut(s)	296, 451, 761, 844, 1200
BtsI	GCAGTG	1 cut(s)	20
BtsIMutI	CAGTG	4 cut(s)	20, 475, 932, 1039
BveI	ACCTGC	1 cut(s)	962
Cac8I	GCNNGC	1 cut(s)	196
CciI	TCATGA	1 cut(s)	640
CfoI	GCGC	1 cut(s)	443
Cfr10I	RCCGGY	1 cut(s)	187
Cfr13I	GGNCC	5 cut(s)	229, 237, 404, 922, 1116
CseI	GACGC	2 cut(s)	388, 1147
Csp6I	GTAC	5 cut(s)	295, 343, 454, 699, 1067
CviAII	CATG	5 cut(s)	503, 641, 802, 1071, 1120
CviQI	GTAC	5 cut(s)	295, 343, 454, 699, 1067
DdeI	CTNAG	4 cut(s)	315, 396, 429, 573
DpnI	GATC	2 cut(s)	64, 167
DpnII	GATC	2 cut(s)	62, 165
EaeI	YGGCCR	1 cut(s)	189
EagI	CGGCCG	1 cut(s)	189
Ecl136II	GAGCTC	1 cut(s)	428
EclXI	CGGCCG	1 cut(s)	189
Eco130I	CCWWGG	2 cut(s)	1070, 1119
Eco24I	GRGCYC	2 cut(s)	200, 430
Eco47I	GGWCC	5 cut(s)	229, 237, 404, 922, 1116
Eco52I	CGGCCG	1 cut(s)	189
Eco53kI	GAGCTC	1 cut(s)	428
Eco81I	CCTNAGG	1 cut(s)	573
EcoICRI	GAGCTC	1 cut(s)	428
EcoO109I	RGGNCCY	1 cut(s)	229
EcoRI	GAATTC	1 cut(s)	578
EcoRII	CCWGG	3 cut(s)	99, 627, 994
EcoT14I	CCWWGG	2 cut(s)	1070, 1119
EcoT22I	ATGCAT	1 cut(s)	803
EcoT38I	GRGCYC	2 cut(s)	200, 430
ErhI	CCWWGG	2 cut(s)	1070, 1119
Esp3I	CGTCTC	3 cut(s)	130, 142, 1130
FaeI	CATG	5 cut(s)	506, 644, 805, 1074, 1123
FalI	AAGNNNNNCTT	2 cut(s)	948, 980
FaqI	GGGAC	1 cut(s)	242
FatI	CATG	5 cut(s)	502, 640, 801, 1070, 1119
FauI	CCCGC	1 cut(s)	242
FauNDI	CATATG	1 cut(s)	1143
FblI	GTMKAC	1 cut(s)	204
Fnu4HI	GCNGC	4 cut(s)	192, 765, 1023, 1125
FokI	GGATG	5 cut(s)	303, 458, 768, 851, 1187
FriOI	GRGCYC	2 cut(s)	200, 430
Fsp4HI	GCNGC	4 cut(s)	192, 765, 1023, 1125
FspBI	CTAG	3 cut(s)	408, 480, 948
GlaI	GCGC	1 cut(s)	442
GluI	GCNGC	4 cut(s)	192, 765, 1023, 1125
GsuI	CTGGAG	1 cut(s)	124
HaeIII	GGCC	1 cut(s)	191
HapII	CCGG	7 cut(s)	88, 188, 200, 226, 235, 359, 417
HgaI	GACGC	2 cut(s)	388, 1147
HhaI	GCGC	1 cut(s)	443
Hin1I	GRCGYC	1 cut(s)	380
Hin1II	CATG	5 cut(s)	506, 644, 805, 1074, 1123
Hin6I	GCGC	1 cut(s)	441
HinP1I	GCGC	1 cut(s)	441
HincII	GTYRAC	1 cut(s)	819
HindII	GTYRAC	1 cut(s)	819
HinfI	GANTC	9 cut(s)	5, 10, 82, 91, 310, 355, 420, 433, 476
HpaII	CCGG	7 cut(s)	88, 188, 200, 226, 235, 359, 417
HphI	GGTGA	4 cut(s)	26, 160, 734, 854
Hpy166II	GTNNAC	3 cut(s)	205, 819, 1039
Hpy188I	TCNGA	6 cut(s)	222, 276, 425, 432, 880, 1006
Hpy188III	TCNNGA	7 cut(s)	235, 314, 352, 480, 575, 641, 860
Hpy8I	GTNNAC	3 cut(s)	205, 819, 1039
Hpy99I	CGWCG	1 cut(s)	353
HpyAV	CCTTC	4 cut(s)	593, 879, 935, 1184
HpyCH4III	ACNGT	5 cut(s)	124, 470, 673, 698, 1043
HpyCH4IV	ACGT	1 cut(s)	685
HpyCH4V	TGCA	4 cut(s)	25, 801, 971, 1127
HpyF10VI	GCNNNNNNNGC	1 cut(s)	968
HpyF3I	CTNAG	4 cut(s)	315, 396, 429, 573
HpySE526I	ACGT	1 cut(s)	685
Hsp92I	GRCGYC	1 cut(s)	380
Hsp92II	CATG	5 cut(s)	506, 644, 805, 1074, 1123
HspAI	GCGC	1 cut(s)	441
Kpn2I	TCCGGA	1 cut(s)	234
Kzo9I	GATC	2 cut(s)	62, 165
LmnI	GCTCC	3 cut(s)	425, 737, 896
Lsp1109I	GCAGC	3 cut(s)	776, 1009, 1111
LweI	GCATC	1 cut(s)	853
MaeI	CTAG	3 cut(s)	408, 480, 948
MaeII	ACGT	1 cut(s)	685
MaeIII	GTNAC	2 cut(s)	610, 1187
MalI	GATC	2 cut(s)	64, 167
MbiI	CCGCTC	1 cut(s)	319
MboI	GATC	2 cut(s)	62, 165
MboII	GAAGA	2 cut(s)	9, 485
MhlI	GDGCHC	2 cut(s)	200, 430
MluCI	AATT	7 cut(s)	115, 278, 578, 658, 708, 1061, 1149
MlyI	GAGTC	2 cut(s)	19, 429
MmeI	TCCRAC	2 cut(s)	403, 806
Mph1103I	ATGCAT	1 cut(s)	803
MroI	TCCGGA	1 cut(s)	234
MroXI	GAANNNNTTC	2 cut(s)	115, 603
MslI	CAYNNNNRTG	3 cut(s)	261, 645, 1044
MspA1I	CMGCKG	1 cut(s)	249
MspI	CCGG	7 cut(s)	88, 188, 200, 226, 235, 359, 417
MspR9I	CCNGG	5 cut(s)	101, 200, 227, 629, 996
Mva1269I	GAATGC	1 cut(s)	899
MvaI	CCWGG	3 cut(s)	101, 629, 996
MvnI	CGCG	2 cut(s)	194, 443
MwoI	GCNNNNNNNGC	1 cut(s)	968
NciI	CCSGG	2 cut(s)	200, 227
NcoI	CCATGG	2 cut(s)	1070, 1119
NdeI	CATATG	1 cut(s)	1143
NdeII	GATC	2 cut(s)	62, 165
NlaIII	CATG	5 cut(s)	506, 644, 805, 1074, 1123
NlaIV	GGNNCC	6 cut(s)	230, 239, 567, 626, 733, 923
NmeAIII	GCCGAG	1 cut(s)	417
NsiI	ATGCAT	1 cut(s)	803
NspV	TTCGAA	1 cut(s)	109
OliI	CACNNNNGTG	1 cut(s)	1044
PagI	TCATGA	1 cut(s)	640
PaqCI	CACCTGC	1 cut(s)	962
PctI	GAATGC	1 cut(s)	899
PdmI	GAANNNNTTC	2 cut(s)	115, 603
PfeI	GAWTC	7 cut(s)	5, 82, 91, 310, 355, 433, 476
PflMI	CCANNNNNTGG	2 cut(s)	713, 1076
PkrI	GCNGC	4 cut(s)	193, 766, 1024, 1126
PleI	GAGTC	2 cut(s)	18, 428
PpsI	GAGTC	2 cut(s)	18, 428
PpuMI	RGGWCCY	1 cut(s)	229
Psp124BI	GAGCTC	1 cut(s)	430
Psp5II	RGGWCCY	1 cut(s)	229
Psp6I	CCWGG	3 cut(s)	99, 627, 994
PspGI	CCWGG	3 cut(s)	99, 627, 994
PspN4I	GGNNCC	6 cut(s)	230, 239, 567, 626, 733, 923
PspPI	GGNCC	5 cut(s)	229, 237, 404, 922, 1116
PspPPI	RGGWCCY	1 cut(s)	229
PstI	CTGCAG	2 cut(s)	973, 1129
RsaI	GTAC	5 cut(s)	296, 344, 455, 700, 1068
RsaNI	GTAC	5 cut(s)	295, 343, 454, 699, 1067
RseI	CAYNNNNRTG	3 cut(s)	261, 645, 1044
SacI	GAGCTC	1 cut(s)	430
SatI	GCNGC	4 cut(s)	192, 765, 1023, 1125
Sau3AI	GATC	2 cut(s)	62, 165
Sau96I	GGNCC	5 cut(s)	229, 237, 404, 922, 1116
SchI	GAGTC	2 cut(s)	19, 429
ScrFI	CCNGG	5 cut(s)	101, 200, 227, 629, 996
SduI	GDGCHC	2 cut(s)	200, 430
SfaNI	GCATC	1 cut(s)	853
SfcI	CTRYAG	2 cut(s)	969, 1125
SfuI	TTCGAA	1 cut(s)	109
SinI	GGWCC	5 cut(s)	229, 237, 404, 922, 1116
SmiMI	CAYNNNNRTG	3 cut(s)	261, 645, 1044
Sse9I	AATT	7 cut(s)	115, 278, 578, 658, 708, 1061, 1149
SsiI	CCGC	6 cut(s)	192, 249, 319, 443, 665, 681
SspMI	CTAG	3 cut(s)	408, 480, 948
SstI	GAGCTC	1 cut(s)	430
StyD4I	CCNGG	5 cut(s)	99, 198, 225, 627, 994
StyI	CCWWGG	2 cut(s)	1070, 1119
TaaI	ACNGT	5 cut(s)	124, 470, 673, 698, 1043
TaiI	ACGT	1 cut(s)	688
TaqI	TCGA	7 cut(s)	8, 61, 109, 261, 308, 351, 545
TasI	AATT	7 cut(s)	115, 278, 578, 658, 708, 1061, 1149
TatI	WGTACW	2 cut(s)	342, 453
TauI	GCSGC	1 cut(s)	194
TfiI	GAWTC	7 cut(s)	5, 82, 91, 310, 355, 433, 476
TscAI	CASTG	4 cut(s)	27, 475, 932, 1046
TseI	GCWGC	3 cut(s)	764, 1022, 1124
TspDTI	ATGAA	3 cut(s)	629, 1074, 1189
TspGWI	ACGGA	5 cut(s)	118, 124, 337, 356, 417
TspRI	CASTG	4 cut(s)	27, 475, 932, 1046
Van91I	CCANNNNNTGG	2 cut(s)	713, 1076
VpaK11BI	GGWCC	5 cut(s)	229, 237, 404, 922, 1116
XapI	RAATTY	3 cut(s)	278, 578, 1061
XbaI	TCTAGA	1 cut(s)	479
XcmI	CCANNNNNNNNNTGG	1 cut(s)	714
XmiI	GTMKAC	1 cut(s)	204
XmnI	GAANNNNTTC	2 cut(s)	115, 603
XspI	CTAG	3 cut(s)	408, 480, 948
Zsp2I	ATGCAT	1 cut(s)	803

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.