MD08G1248500.v1.1

UPF0420 protein C16orf58 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
OG0014565
Physical Location & Seq
Forward (+)
31254525 .. 31260250
5726 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1248500.v1.1.491

Sequence Viewer

Length: 1575 bp
ATGCCTCCGCTCCCGATGAAACTCAAGCAATCTTCTGCTTCCGCTTCTTCTACCAATCAATCCCTCACCACAACCGCCACCAGCGCGCAGGAAGCGCGCCTTCTCGTCCGTGAGACGCTGCGTATCAGTGCCACCCTCGCTTCCTTCGCTCCCTCCCAGTCCCAGGCCCTGCCTTTGGACGCCCAACCCCCCAAGCAGCATCTTCCCCAGCTGCTCCACCACGATCAGGATTTTGTGGGCTCCAGCTTCCGTTTGATTTGCTGCGAGGAGATCGACGGCCGTCGATGGAACTACGTCGCCGAGCCCGATTCCTCCTCCTCCTCCTCTGCAACCACCTTCAGGAAGGGCTCTTTTCGCGCCCTTAGCTTGCACAGCCCTCAACCCCCTCTCGACGGGTTGATGTCTTTTGTAAGGTCATATGTTGTCCCAGAAGGTTTCCCTGATAGTGTAATCCCTTCCTATGTCCCCTACATGACATGGAGAGCTCTCAAGCACTTCTTTGGTGGCGCAATGGGTGTTTTTACAACACAAACCCTTTTGAATTCAGTTGGGGTCTCTAGAAATACATCTGCTTCTGGGGCTGTTGCTATCAACTGGATTCTCAAGGATGGTGCTGGGCGTGTTGGAAAAATGCTTTTTGCCCGACAAGGAAAGAAATTTGATTATGATCTAAAACAGTTGCGGTTTGCTGGTGATCTTCTCATGGAATTGGGTGCTGGAATAGAGTTGGCAACTGCAGCTGTCCCTCACCTGTTTCTTCCTTTGGCTTGTGCAGCTAATGTGGCAAAGAATGTTGGTGCTGTTACATCAACATCAACTCGGACACCAATTTACAAAGCATTTGCAAAAGGAGAAAACATTGGAGATGTGACAGCTAAAGGAGAATGTGTTGGCAATATTGCGGATCTGCTGGGAACTGGCCTGAGTATATTGATCTCAAAAAGAAATCCATCTCTGATAACTACATTTGCGCTCCTTTCATGTGGCTATGTTCTCAGCTCCTACCAAGAGGTTAAATCTGTAGTATTGCACACCTTGAACCGAGCGAGATTCGGTGTGGCAGTAGATGCCTTTCTTAAAACAGGGCGAGTGCCGTCATTGCTGGAAGGAAACTTGAAGGAAAACGTTTTCAATTTTCCCTGGGTGAAAGATGGGCCTATCGTTCTTGGACAACGATTTAAAGATGCATTCCAAGAGCCAAGTGTATACCTTGCGATAGAGCCGTTCTTTGAGAAAGAGAAATATGTTGTGACATATAATCCTTCAAAAGGTAAAGTGTACGCATTGTTCAAAGATCAAGCGAAGTCAGATGACATTCTAAAAGCGGCATATCATGCTCAGGTACTTCTGCATTTCATGCAATTATCATACAACAGTCAGCATCTGTATCAGAAGGACAAGAAAGATGAATTTTTAAACTTCGAGCCCACAGCTAAAGATCTGGAGGCATGCATTGTTGAGTCATGTAACATGGTCTCAACTTCTTATGGGATTTTCAAGAGTAAAGCTAAAGAACAGGGATGGATGATGTCAGAAGCACATCTCAATCCTGGCCGTGCTCGTCTGATTAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF647

Protein Analysis

525

Amino Acids

57.48

Weight (kDa)

9.18

Isoelectric Point (pI)

42.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RUS6_N PF24162 27 - 127 6.4e-32 Protein root UVB sensitive 6, N-terminal
UVB_sens_prot PF04884 133 - 361 4.8e-74 Vitamin B6 photo-protection and homoeostasis domain
UVB_sens_C PF24160 363 - 517 1.1e-13 Root UVB sensitive protein, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014565)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49820
fragaria_vesca FvH4_5g27690
malus_domestica MD08G1248500.v1.1 MD15G1443300.v1.1
prunus_persica Prupe.1G585900_v2.0.a1
pyrus_communis pycom08g21530 pycom15g39100
rosa_chinensis RchiOBHm_Chr7g0219391
rosa_laevigata RLG00000002291
rosa_multiflora Rmu_sc0002460.1_g000012
rosa_roxburghii Rroxscaffold_3G00240060
rosa_rugosa Rorug07G0184800
rosa_samantha Rh7AG327700 Rh7CG345000 Rh7DG323100
rosa_wichuraiana Rw7G027590 Rw7G027680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 10
AccI GTMKAC 1 cut(s) 1206
AccII CGCG 3 cut(s) 86, 97, 357
AciI CCGC 6 cut(s) 8, 42, 75, 682, 902, 1325
AclI AACGTT 1 cut(s) 1125
AclWI GGATC 1 cut(s) 912
AcoI YGGCCR 2 cut(s) 277, 1552
AcsI RAATTY 3 cut(s) 541, 656, 1409
AcuI CTGAAG 1 cut(s) 322
AcyI GRCGYC 1 cut(s) 180
AfaI GTAC 2 cut(s) 1280, 1344
AfiI CCNNNNNNNGG 6 cut(s) 163, 175, 226, 339, 392, 1268
AgsI TTSAA 7 cut(s) 541, 1039, 1117, 1132, 1266, 1291, 1498
AjnI CCWGG 3 cut(s) 162, 1139, 1549
Alw21I GWGCWC 2 cut(s) 487, 1561
Alw26I GTCTC 3 cut(s) 107, 559, 1480
AlwI GGATC 1 cut(s) 912
AlwNI CAGNNNCTG 2 cut(s) 169, 1384
AoxI GGCC 5 cut(s) 165, 277, 919, 1154, 1552
ApeKI GCWGC 6 cut(s) 118, 196, 211, 261, 737, 773
ApoI RAATTY 3 cut(s) 541, 656, 1409
AspLEI GCGC 7 cut(s) 86, 88, 97, 99, 359, 509, 973
AspS9I GGNCC 2 cut(s) 166, 1154
AsuHPI GGTGA 4 cut(s) 58, 704, 740, 1156
BanII GRGCYC 5 cut(s) 242, 306, 350, 487, 1428
Bbv12I GWGCWC 2 cut(s) 487, 1561
BbvI GCAGC 6 cut(s) 105, 198, 208, 248, 749, 785
BccI CCATC 5 cut(s) 279, 602, 958, 1145, 1515
BceAI ACGGC 5 cut(s) 264, 292, 1078, 1207, 1539
BciT130I CCWGG 3 cut(s) 164, 1141, 1551
BcoDI GTCTC 3 cut(s) 107, 559, 1480
BfaI CTAG 1 cut(s) 558
BfmI CTRYAG 2 cut(s) 735, 1020
BglII AGATCT 1 cut(s) 1438
BisI GCNGC 7 cut(s) 119, 197, 212, 262, 738, 774, 1326
BlsI GCNGC 7 cut(s) 120, 198, 213, 263, 739, 775, 1327
Bme1390I CCNGG 3 cut(s) 164, 1141, 1551
BmgT120I GGNCC 2 cut(s) 166, 1154
BmiI GGNNCC 1 cut(s) 241
BmrFI CCNGG 3 cut(s) 164, 1141, 1551
BmrI ACTGGG 1 cut(s) 151
BmsI GCATC 4 cut(s) 208, 1057, 1174, 1390
BmuI ACTGGG 1 cut(s) 151
BoxI GACNNNNGTC 1 cut(s) 279
BpmI CTGGAG 2 cut(s) 226, 1463
Bpu10I CCTNAGC 2 cut(s) 362, 1338
BpuEI CTTGAG 3 cut(s) 8, 473, 587
BsaBI GATNNNNATC 1 cut(s) 666
BsaHI GRCGYC 1 cut(s) 180
BsaI GGTCTC 2 cut(s) 559, 1480
BsaJI CCNNGG 3 cut(s) 162, 1139, 1140
BsaXI ACNNNNNCTCC 2 cut(s) 873, 903
Bsc4I CCNNNNNNNGG 6 cut(s) 163, 175, 226, 339, 392, 1268
Bse1I ACTGG 3 cut(s) 157, 599, 922
Bse3DI GCAATG 2 cut(s) 516, 1097
Bse8I GATNNNNATC 1 cut(s) 666
BseBI CCWGG 3 cut(s) 164, 1141, 1551
BseDI CCNNGG 3 cut(s) 162, 1139, 1140
BseGI GGATG 3 cut(s) 613, 1526, 1530
BseJI GATNNNNATC 1 cut(s) 666
BseLI CCNNNNNNNGG 6 cut(s) 163, 175, 226, 339, 392, 1268
BseMI GCAATG 2 cut(s) 516, 1097
BseMII CTCAG 3 cut(s) 914, 1009, 1352
BseNI ACTGG 3 cut(s) 157, 599, 922
BsePI GCGCGC 2 cut(s) 84, 95
BseRI GAGGAG 5 cut(s) 281, 304, 307, 310, 313
BseX3I CGGCCG 1 cut(s) 277
BseXI GCAGC 6 cut(s) 105, 198, 208, 248, 749, 785
BseYI CCCAGC 3 cut(s) 207, 614, 910
BsgI GTGCAG 1 cut(s) 792
Bsh1236I CGCG 3 cut(s) 86, 97, 357
Bsh1285I CGRYCG 1 cut(s) 280
BshFI GGCC 5 cut(s) 167, 279, 921, 1156, 1554
BsiEI CGRYCG 1 cut(s) 280
BsiHKAI GWGCWC 2 cut(s) 487, 1561
BslFI GGGAC 4 cut(s) 145, 410, 449, 728
BslI CCNNNNNNNGG 6 cut(s) 163, 175, 226, 339, 392, 1268
BsmAI GTCTC 3 cut(s) 107, 559, 1480
BsmBI CGTCTC 1 cut(s) 107
BsmFI GGGAC 4 cut(s) 145, 410, 449, 728
BsmI GAATGC 1 cut(s) 1187
BsnI GGCC 5 cut(s) 167, 279, 921, 1156, 1554
Bso31I GGTCTC 2 cut(s) 559, 1480
Bsp1286I GDGCHC 6 cut(s) 242, 306, 350, 487, 1428, 1561
Bsp143I GATC 8 cut(s) 223, 270, 667, 694, 904, 933, 1294, 1438
BspACI CCGC 6 cut(s) 8, 42, 75, 682, 902, 1325
BspANI GGCC 5 cut(s) 167, 279, 921, 1156, 1554
BspCNI CTCAG 3 cut(s) 915, 1008, 1351
BspFNI CGCG 3 cut(s) 86, 97, 357
BspLI GGNNCC 1 cut(s) 241
BspMAI CTGCAG 1 cut(s) 739
BspPI GGATC 1 cut(s) 912
BspTNI GGTCTC 2 cut(s) 559, 1480
BsrBI CCGCTC 1 cut(s) 10
BsrDI GCAATG 2 cut(s) 516, 1097
BsrI ACTGG 3 cut(s) 157, 599, 922
BssECI CCNNGG 3 cut(s) 162, 1139, 1140
BssHII GCGCGC 2 cut(s) 84, 95
BssMI GATC 8 cut(s) 223, 270, 667, 694, 904, 933, 1294, 1438
BssNAI GTATAC 1 cut(s) 1207
BssNI GRCGYC 1 cut(s) 180
Bst1107I GTATAC 1 cut(s) 1207
Bst2UI CCWGG 3 cut(s) 164, 1141, 1551
Bst4CI ACNGT 2 cut(s) 678, 1376
BstACI GRCGYC 1 cut(s) 180
BstAPI GCANNNNNTGC 3 cut(s) 1067, 1334, 1357
BstC8I GCNNGC 4 cut(s) 86, 97, 368, 1450
BstDEI CTNAG 4 cut(s) 362, 923, 995, 1338
BstENI CCTNNNNNAGG 1 cut(s) 1266
BstF5I GGATG 3 cut(s) 613, 1526, 1530
BstFNI CGCG 3 cut(s) 86, 97, 357
BstHHI GCGC 7 cut(s) 86, 88, 97, 99, 359, 509, 973
BstKTI GATC 8 cut(s) 226, 273, 670, 697, 907, 936, 1297, 1441
BstMAI GTCTC 3 cut(s) 107, 559, 1480
BstMBI GATC 8 cut(s) 223, 270, 667, 694, 904, 933, 1294, 1438
BstMCI CGRYCG 1 cut(s) 280
BstNI CCWGG 3 cut(s) 164, 1141, 1551
BstNSI RCATGY 1 cut(s) 1452
BstPAI GACNNNNGTC 1 cut(s) 279
BstSCI CCNGG 3 cut(s) 162, 1139, 1549
BstSFI CTRYAG 2 cut(s) 735, 1020
BstUI CGCG 3 cut(s) 86, 97, 357
BstV1I GCAGC 6 cut(s) 105, 198, 208, 248, 749, 785
BstX2I RGATCY 2 cut(s) 904, 1438
BstYI RGATCY 2 cut(s) 904, 1438
BstZ17I GTATAC 1 cut(s) 1207
BstZI CGGCCG 1 cut(s) 277
BsuRI GGCC 5 cut(s) 167, 279, 921, 1156, 1554
BtsCI GGATG 3 cut(s) 613, 1526, 1530
BtsIMutI CAGTG 1 cut(s) 133
Cac8I GCNNGC 4 cut(s) 86, 97, 368, 1450
CaiI CAGNNNCTG 2 cut(s) 169, 1384
CfoI GCGC 7 cut(s) 86, 88, 97, 99, 359, 509, 973
Cfr13I GGNCC 2 cut(s) 166, 1154
CseI GACGC 2 cut(s) 124, 188
Csp6I GTAC 2 cut(s) 1279, 1343
CviAII CATG 9 cut(s) 472, 477, 703, 981, 1334, 1357, 1449, 1464, 1471
CviQI GTAC 2 cut(s) 1279, 1343
DdeI CTNAG 4 cut(s) 362, 923, 995, 1338
DpnI GATC 8 cut(s) 225, 272, 669, 696, 906, 935, 1296, 1440
DpnII GATC 8 cut(s) 223, 270, 667, 694, 904, 933, 1294, 1438
DraI TTTAAA 2 cut(s) 1180, 1416
EaeI YGGCCR 2 cut(s) 277, 1552
EagI CGGCCG 1 cut(s) 277
Ecl136II GAGCTC 1 cut(s) 485
EclXI CGGCCG 1 cut(s) 277
Eco24I GRGCYC 5 cut(s) 242, 306, 350, 487, 1428
Eco31I GGTCTC 2 cut(s) 559, 1480
Eco52I CGGCCG 1 cut(s) 277
Eco53kI GAGCTC 1 cut(s) 485
Eco57I CTGAAG 1 cut(s) 322
EcoICRI GAGCTC 1 cut(s) 485
EcoNI CCTNNNNNAGG 1 cut(s) 1266
EcoO109I RGGNCCY 1 cut(s) 166
EcoRI GAATTC 1 cut(s) 541
EcoRII CCWGG 3 cut(s) 162, 1139, 1549
EcoT22I ATGCAT 2 cut(s) 1189, 1454
EcoT38I GRGCYC 5 cut(s) 242, 306, 350, 487, 1428
Esp3I CGTCTC 1 cut(s) 107
FaeI CATG 9 cut(s) 475, 480, 706, 984, 1337, 1360, 1452, 1467, 1474
FalI AAGNNNNNCTT 4 cut(s) 84, 116, 482, 514
FaqI GGGAC 4 cut(s) 145, 410, 449, 728
FatI CATG 9 cut(s) 471, 476, 702, 980, 1333, 1356, 1448, 1463, 1470
FauNDI CATATG 1 cut(s) 418
FblI GTMKAC 1 cut(s) 1206
Fnu4HI GCNGC 7 cut(s) 119, 197, 212, 262, 738, 774, 1326
FokI GGATG 3 cut(s) 620, 1533, 1537
FriOI GRGCYC 5 cut(s) 242, 306, 350, 487, 1428
Fsp4HI GCNGC 7 cut(s) 119, 197, 212, 262, 738, 774, 1326
FspBI CTAG 1 cut(s) 558
GlaI GCGC 7 cut(s) 85, 87, 96, 98, 358, 508, 972
GluI GCNGC 7 cut(s) 119, 197, 212, 262, 738, 774, 1326
GsaI CCCAGC 3 cut(s) 211, 618, 914
GsuI CTGGAG 2 cut(s) 226, 1463
HaeIII GGCC 5 cut(s) 167, 279, 921, 1156, 1554
HgaI GACGC 2 cut(s) 124, 188
HhaI GCGC 7 cut(s) 86, 88, 97, 99, 359, 509, 973
Hin1I GRCGYC 1 cut(s) 180
Hin1II CATG 9 cut(s) 475, 480, 706, 984, 1337, 1360, 1452, 1467, 1474
Hin6I GCGC 7 cut(s) 84, 86, 95, 97, 357, 507, 971
HinP1I GCGC 7 cut(s) 84, 86, 95, 97, 357, 507, 971
HinfI GANTC 4 cut(s) 308, 598, 1050, 1460
HphI GGTGA 4 cut(s) 58, 704, 740, 1156
Hpy166II GTNNAC 2 cut(s) 1207, 1279
Hpy188I TCNGA 6 cut(s) 822, 957, 1309, 1392, 1534, 1566
Hpy188III TCNNGA 7 cut(s) 13, 227, 340, 389, 558, 1442, 1498
Hpy8I GTNNAC 2 cut(s) 1207, 1279
Hpy99I CGWCG 4 cut(s) 278, 285, 299, 395
HpyCH4III ACNGT 2 cut(s) 678, 1376
HpyCH4IV ACGT 2 cut(s) 294, 1125
HpyF3I CTNAG 4 cut(s) 362, 923, 995, 1338
HpySE526I ACGT 2 cut(s) 294, 1125
Hsp92I GRCGYC 1 cut(s) 180
Hsp92II CATG 9 cut(s) 475, 480, 706, 984, 1337, 1360, 1452, 1467, 1474
HspAI GCGC 7 cut(s) 84, 86, 95, 97, 357, 507, 971
Kzo9I GATC 8 cut(s) 223, 270, 667, 694, 904, 933, 1294, 1438
LmnI GCTCC 6 cut(s) 15, 154, 219, 245, 978, 1004
Lsp1109I GCAGC 6 cut(s) 105, 198, 208, 248, 749, 785
LweI GCATC 4 cut(s) 208, 1057, 1174, 1390
MaeI CTAG 1 cut(s) 558
MaeII ACGT 2 cut(s) 294, 1125
MaeIII GTNAC 4 cut(s) 802, 868, 1249, 1466
MalI GATC 8 cut(s) 225, 272, 669, 696, 906, 935, 1296, 1440
MbiI CCGCTC 1 cut(s) 10
MboI GATC 8 cut(s) 223, 270, 667, 694, 904, 933, 1294, 1438
MboII GAAGA 5 cut(s) 24, 39, 194, 689, 749
MflI RGATCY 2 cut(s) 904, 1438
MhlI GDGCHC 6 cut(s) 242, 306, 350, 487, 1428, 1561
MluCI AATT 7 cut(s) 541, 656, 707, 828, 1132, 1361, 1409
MlyI GAGTC 1 cut(s) 1469
MmeI TCCRAC 1 cut(s) 604
Mph1103I ATGCAT 2 cut(s) 1189, 1454
MseI TTAA 5 cut(s) 1014, 1077, 1179, 1415, 1569
MspA1I CMGCKG 2 cut(s) 211, 740
MspR9I CCNGG 3 cut(s) 164, 1141, 1551
Mva1269I GAATGC 1 cut(s) 1187
MvaI CCWGG 3 cut(s) 164, 1141, 1551
MvnI CGCG 3 cut(s) 86, 97, 357
NdeI CATATG 1 cut(s) 418
NdeII GATC 8 cut(s) 223, 270, 667, 694, 904, 933, 1294, 1438
NlaIII CATG 9 cut(s) 475, 480, 706, 984, 1337, 1360, 1452, 1467, 1474
NlaIV GGNNCC 1 cut(s) 241
NmeAIII GCCGAG 1 cut(s) 325
NmuCI GTSAC 2 cut(s) 868, 1249
NsiI ATGCAT 2 cut(s) 1189, 1454
NspI RCATGY 1 cut(s) 1452
PaeI GCATGC 1 cut(s) 1452
PasI CCCWGGG 1 cut(s) 1140
PauI GCGCGC 2 cut(s) 84, 95
PcsI WCGNNNNNNNCGW 1 cut(s) 303
PctI GAATGC 1 cut(s) 1187
PfeI GAWTC 3 cut(s) 308, 598, 1050
PkrI GCNGC 7 cut(s) 120, 198, 213, 263, 739, 775, 1327
PleI GAGTC 1 cut(s) 1468
PpsI GAGTC 1 cut(s) 1468
PshAI GACNNNNGTC 1 cut(s) 279
Psp124BI GAGCTC 1 cut(s) 487
Psp1406I AACGTT 1 cut(s) 1125
Psp6I CCWGG 3 cut(s) 162, 1139, 1549
PspFI CCCAGC 3 cut(s) 207, 614, 910
PspGI CCWGG 3 cut(s) 162, 1139, 1549
PspN4I GGNNCC 1 cut(s) 241
PspPI GGNCC 2 cut(s) 166, 1154
PsrI GAACNNNNNNTAC 2 cut(s) 1271, 1303
PstI CTGCAG 1 cut(s) 739
PstNI CAGNNNCTG 2 cut(s) 169, 1384
PsuI RGATCY 2 cut(s) 904, 1438
PteI GCGCGC 2 cut(s) 84, 95
PvuII CAGCTG 2 cut(s) 211, 740
RsaI GTAC 2 cut(s) 1280, 1344
RsaNI GTAC 2 cut(s) 1279, 1343
SacI GAGCTC 1 cut(s) 487
SaqAI TTAA 5 cut(s) 1014, 1077, 1179, 1415, 1569
SatI GCNGC 7 cut(s) 119, 197, 212, 262, 738, 774, 1326
Sau3AI GATC 8 cut(s) 223, 270, 667, 694, 904, 933, 1294, 1438
Sau96I GGNCC 2 cut(s) 166, 1154
SchI GAGTC 1 cut(s) 1469
ScrFI CCNGG 3 cut(s) 164, 1141, 1551
SduI GDGCHC 6 cut(s) 242, 306, 350, 487, 1428, 1561
SfaNI GCATC 4 cut(s) 208, 1057, 1174, 1390
SfcI CTRYAG 2 cut(s) 735, 1020
SmlI CTYRAG 3 cut(s) 23, 488, 602
SmoI CTYRAG 3 cut(s) 23, 488, 602
SphI GCATGC 1 cut(s) 1452
Sse9I AATT 7 cut(s) 541, 656, 707, 828, 1132, 1361, 1409
SsiI CCGC 6 cut(s) 8, 42, 75, 682, 902, 1325
SspI AATATT 1 cut(s) 898
SspMI CTAG 1 cut(s) 558
SstI GAGCTC 1 cut(s) 487
StyD4I CCNGG 3 cut(s) 162, 1139, 1549
TaaI ACNGT 2 cut(s) 678, 1376
TaiI ACGT 2 cut(s) 297, 1128
TaqI TCGA 4 cut(s) 273, 283, 390, 1422
TasI AATT 7 cut(s) 541, 656, 707, 828, 1132, 1361, 1409
TauI GCSGC 1 cut(s) 1328
TfiI GAWTC 3 cut(s) 308, 598, 1050
Tru1I TTAA 5 cut(s) 1014, 1077, 1179, 1415, 1569
Tru9I TTAA 5 cut(s) 1014, 1077, 1179, 1415, 1569
TscAI CASTG 1 cut(s) 133
TseFI GTSAC 2 cut(s) 868, 1249
TseI GCWGC 6 cut(s) 118, 196, 211, 261, 737, 773
Tsp45I GTSAC 2 cut(s) 868, 1249
TspDTI ATGAA 4 cut(s) 32, 969, 1345, 1422
TspGWI ACGGA 2 cut(s) 98, 239
TspRI CASTG 1 cut(s) 133
XagI CCTNNNNNAGG 1 cut(s) 1266
XapI RAATTY 3 cut(s) 541, 656, 1409
XbaI TCTAGA 1 cut(s) 557
XceI RCATGY 1 cut(s) 1452
XmiI GTMKAC 1 cut(s) 1206
XspI CTAG 1 cut(s) 558
Zsp2I ATGCAT 2 cut(s) 1189, 1454
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.