Rroxscaffold_3G00240060

UPF0420 protein C16orf58 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0014565
Physical Location & Seq
Forward (+)
31554626 .. 31561184
6559 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00240060.1

Sequence Viewer

Length: 1527 bp
ATGTCTCCCCTCGGCGGCAAAAACTCGCCGGCGAATCAAACCCTCACCACCACCACCGCACAGGACGCGCGACTTCTCGTCCGCGAAACGCTCCGTATTAGCGCCACCCTCGCATCCTCCCCCTCTGCTCCTCCGGCCGAGCCTCTTCTGCCTCTCGACAACCGCAACCACCACCAGCTTCGGCTCGGCGACGACTTCGTCGGCTCCAGCTTCAGATTGATTTGCTGCGAGGAGATCGACGGCCGCAGATGGAACTACGTGGCCGAGCCTGATTCCTCCACCGGAACCTTCAAGAAGGGCTCCTTCCGTTCCCTCAGCTTGCACAGTCCTCAACCTCCTCTTGAAGGGTTGAAGTCGTTTGTGACATCCTATGTTGTTCCGGAAGGATTTCCGGATAGTGTGATCCCTTCATATGTACCGTATATGACGTGGAGAGCTCTCAAGCACTTCTTCGGCGGGGCAATGGGCGTTTTCACAACACAGACCCTCCTGAGTTCAGTTGGAGTTGCTAGAAACACAGCTGCTCCTGGGGCTGTTGCTATCAACTGGATTCTCAAGGATGGTGCCGGTCGTGTTGGAAAAATGCTTTTTGCCCGACAAGGAAAGAAGTTTGACTATGATCTAAAACAGTTACGCTTTGCGGGTGATCTTCTTATGGAGTTGGGTGCTGGGGTTGAGTTGGCAACTGCAGCTGTGCCGCACCTTTTTCTTCCTTTGGCTTGTGCAGCTAATGTGGCAAAGAATGTTGCTGCTGTAACGTCAACATCAACTCGTACACCAATTTATAAAGCGTTTGCTAAAGGAGAAAATATTGGGGATGTGACGGCTAAGGGAGAATGTGTGGGCAATATTGCAGATCTGCTGGGAACTGGACTGAGCATATTGATCTCAAAAAGAAATCCTTCATTAGTGACCACATTTGCCCTCCTTTCCTGTGGATATGTGCTCAGCTCTTACAAAGAGGTTAAATCTGTAGTGTTGCACACCTTAAACCGAGCAAGATTCAGCATGGCTGTAGATGCCTTTCTTAAAACAGGGAGAGTTCCCTCGTTGCAGGAGGGAAACGCGAATGAGAATGTATTCAGTTTTCCGTGGGTGAAAGATGGGCCTGTTGTTCTCGGGCCAAGATTTAAAGATGCGTTCCAAGAACCAAGTGTATATCTTGCCTTAGAGCCTTTCTTTGAGAAAGAGAGATATGTTGTTACGTACAATCCTGCAAAAGGTAAAGTATATGCATTGCTAAAGGATCAAGCGAAGTCGGATGACATTCTAAAAGCAGCTTTTCATGCTCAGGTGCTTTTGCATTTCATGCGTTTATCCTATGATGCTCAGCCCCTGTCTCAGAAACAGAGAAAAGATGGATATTCAAACTTTGTTCCTACAGCGAAAGATCTGGAGGCATATATTGTTGAGTCATGTAAAATGGTCTCAAATTCATATGGAATTTTTAAGAGTAAAGCAGCAGAGCAGGGGTGGATGATGTCAGAAGCGCATATGAATCCTGGCCGGGCTCGTCTTATTAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF647

Protein Analysis

508

Amino Acids

55.42

Weight (kDa)

9.34

Isoelectric Point (pI)

39.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RUS6_N PF24162 18 - 111 1.7e-33 Protein root UVB sensitive 6, N-terminal
UVB_sens_prot PF04884 117 - 345 9.6e-76 Vitamin B6 photo-protection and homoeostasis domain
UVB_sens_C PF24160 347 - 501 1e-13 Root UVB sensitive protein, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014565)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49820
fragaria_vesca FvH4_5g27690
malus_domestica MD08G1248500.v1.1 MD15G1443300.v1.1
prunus_persica Prupe.1G585900_v2.0.a1
pyrus_communis pycom08g21530 pycom15g39100
rosa_chinensis RchiOBHm_Chr7g0219391
rosa_laevigata RLG00000002291
rosa_multiflora Rmu_sc0002460.1_g000012
rosa_roxburghii Rroxscaffold_3G00240060
rosa_rugosa Rorug07G0184800
rosa_samantha Rh7AG327700 Rh7CG345000 Rh7DG323100
rosa_wichuraiana Rw7G027590 Rw7G027680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 786
AasI GACNNNNNNGTC 1 cut(s) 197
AccB1I GGYRCC 1 cut(s) 563
AccII CGCG 4 cut(s) 68, 70, 84, 1067
AccIII TCCGGA 2 cut(s) 379, 391
AciI CCGC 8 cut(s) 15, 57, 82, 163, 244, 456, 641, 698
AclWI GGATC 2 cut(s) 397, 1254
AcoI YGGCCR 4 cut(s) 135, 241, 261, 1504
AcsI RAATTY 2 cut(s) 1432, 1443
AcuI CTGAAG 1 cut(s) 196
AfaI GTAC 3 cut(s) 417, 775, 1208
AfiI CCNNNNNNNGG 3 cut(s) 14, 344, 1220
AgsI TTSAA 4 cut(s) 292, 344, 352, 1368
AhdI GACNNNNNGTC 1 cut(s) 77
AjiI CACGTC 1 cut(s) 429
AjnI CCWGG 2 cut(s) 526, 1501
AluBI AGCT 9 cut(s) 178, 210, 318, 437, 521, 692, 728, 951, 1280
AluI AGCT 9 cut(s) 178, 210, 318, 437, 521, 692, 728, 951, 1280
Alw21I GWGCWC 2 cut(s) 439, 948
Alw26I GTCTC 3 cut(s) 9, 1344, 1432
AlwI GGATC 2 cut(s) 397, 1254
AlwNI CAGNNNCTG 1 cut(s) 1336
Ama87I CYCGRG 1 cut(s) 1118
Aor13HI TCCGGA 2 cut(s) 379, 391
AoxI GGCC 6 cut(s) 135, 241, 261, 1106, 1121, 1504
ApeKI GCWGC 7 cut(s) 225, 521, 689, 725, 749, 1277, 1460
ApoI RAATTY 2 cut(s) 1432, 1443
Asp700I GAANNNNTTC 3 cut(s) 387, 901, 1079
AspLEI GCGC 3 cut(s) 70, 104, 1492
AspS9I GGNCC 2 cut(s) 1106, 1121
AsuC2I CCSGG 1 cut(s) 1508
AsuHPI GGTGA 3 cut(s) 37, 656, 1108
AvaI CYCGRG 1 cut(s) 1118
BanI GGYRCC 1 cut(s) 563
BanII GRGCYC 3 cut(s) 302, 439, 1513
Bbv12I GWGCWC 2 cut(s) 439, 948
BbvCI CCTCAGC 1 cut(s) 314
BbvI GCAGC 7 cut(s) 212, 508, 701, 736, 737, 1289, 1472
BccI CCATC 4 cut(s) 243, 554, 1097, 1352
BceAI ACGGC 2 cut(s) 256, 840
BciT130I CCWGG 2 cut(s) 528, 1503
BcnI CCSGG 1 cut(s) 1508
BcoDI GTCTC 3 cut(s) 9, 1344, 1432
BfaI CTAG 1 cut(s) 510
BfmI CTRYAG 4 cut(s) 687, 972, 1014, 1380
BfoI RGCGCY 1 cut(s) 105
BglII AGATCT 2 cut(s) 856, 1390
BlpI GCTNAGC 2 cut(s) 947, 1329
Bme1390I CCNGG 3 cut(s) 528, 1503, 1508
BmeRI GACNNNNNGTC 1 cut(s) 77
BmeT110I CYCGRG 1 cut(s) 1118
BmgBI CACGTC 1 cut(s) 429
BmgT120I GGNCC 2 cut(s) 1106, 1121
BmiI GGNNCC 4 cut(s) 205, 286, 301, 565
BmrFI CCNGG 3 cut(s) 528, 1503, 1508
BmsI GCATC 4 cut(s) 122, 1009, 1126, 1315
BpmI CTGGAG 2 cut(s) 190, 1415
Bpu10I CCTNAGC 3 cut(s) 314, 828, 1290
Bpu1102I GCTNAGC 2 cut(s) 947, 1329
BpuEI CTTGAG 2 cut(s) 425, 539
BpuMI CCSGG 1 cut(s) 1508
BsaAI YACGTR 2 cut(s) 259, 1206
BsaI GGTCTC 1 cut(s) 1432
BsaJI CCNNGG 3 cut(s) 10, 527, 1091
BsaWI WCCGGW 3 cut(s) 281, 379, 391
BsaXI ACNNNNNCTCC 6 cut(s) 471, 501, 508, 538, 825, 855
Bsc4I CCNNNNNNNGG 3 cut(s) 14, 344, 1220
Bse118I RCCGGY 2 cut(s) 28, 566
Bse1I ACTGG 2 cut(s) 551, 874
Bse3DI GCAATG 2 cut(s) 468, 1235
BseAI TCCGGA 2 cut(s) 379, 391
BseBI CCWGG 2 cut(s) 528, 1503
BseDI CCNNGG 3 cut(s) 10, 527, 1091
BseGI GGATG 6 cut(s) 113, 365, 565, 823, 1267, 1482
BseLI CCNNNNNNNGG 3 cut(s) 14, 344, 1220
BseMI GCAATG 2 cut(s) 468, 1235
BseMII CTCAG 7 cut(s) 328, 482, 866, 961, 1304, 1343, 1355
BseNI ACTGG 2 cut(s) 551, 874
BseRI GAGGAG 3 cut(s) 120, 245, 327
BseX3I CGGCCG 2 cut(s) 135, 241
BseXI GCAGC 7 cut(s) 212, 508, 701, 736, 737, 1289, 1472
BseYI CCCAGC 2 cut(s) 668, 862
BsgI GTGCAG 1 cut(s) 744
Bsh1236I CGCG 4 cut(s) 68, 70, 84, 1067
Bsh1285I CGRYCG 3 cut(s) 138, 244, 571
BshFI GGCC 6 cut(s) 137, 243, 263, 1108, 1123, 1506
BshNI GGYRCC 1 cut(s) 563
BsiEI CGRYCG 3 cut(s) 138, 244, 571
BsiHKAI GWGCWC 2 cut(s) 439, 948
BsiHKCI CYCGRG 1 cut(s) 1118
BsiSI CCGG 7 cut(s) 29, 134, 282, 380, 392, 567, 1507
BslI CCNNNNNNNGG 3 cut(s) 14, 344, 1220
BsmAI GTCTC 3 cut(s) 9, 1344, 1432
BsnI GGCC 6 cut(s) 137, 243, 263, 1108, 1123, 1506
Bso31I GGTCTC 1 cut(s) 1432
BsoBI CYCGRG 1 cut(s) 1118
Bsp1286I GDGCHC 4 cut(s) 302, 439, 948, 1513
Bsp13I TCCGGA 2 cut(s) 379, 391
Bsp143I GATC 8 cut(s) 234, 402, 619, 646, 856, 885, 1246, 1390
Bsp1720I GCTNAGC 2 cut(s) 947, 1329
BspACI CCGC 8 cut(s) 15, 57, 82, 163, 244, 456, 641, 698
BspANI GGCC 6 cut(s) 137, 243, 263, 1108, 1123, 1506
BspCNI CTCAG 7 cut(s) 327, 483, 867, 960, 1303, 1342, 1354
BspEI TCCGGA 2 cut(s) 379, 391
BspFNI CGCG 4 cut(s) 68, 70, 84, 1067
BspLI GGNNCC 4 cut(s) 205, 286, 301, 565
BspMAI CTGCAG 1 cut(s) 691
BspPI GGATC 2 cut(s) 397, 1254
BspT107I GGYRCC 1 cut(s) 563
BspTNI GGTCTC 1 cut(s) 1432
BsrDI GCAATG 2 cut(s) 468, 1235
BsrFI RCCGGY 2 cut(s) 28, 566
BsrI ACTGG 2 cut(s) 551, 874
BssAI RCCGGY 2 cut(s) 28, 566
BssECI CCNNGG 3 cut(s) 10, 527, 1091
BssMI GATC 8 cut(s) 234, 402, 619, 646, 856, 885, 1246, 1390
Bst2UI CCWGG 2 cut(s) 528, 1503
Bst4CI ACNGT 3 cut(s) 326, 420, 630
Bst6I CTCTTC 1 cut(s) 150
BstAPI GCANNNNNTGC 1 cut(s) 1309
BstBAI YACGTR 2 cut(s) 259, 1206
BstC8I GCNNGC 2 cut(s) 30, 320
BstDEI CTNAG 9 cut(s) 314, 491, 828, 875, 947, 1168, 1290, 1329, 1341
BstDSI CCRYGG 1 cut(s) 1091
BstENI CCTNNNNNAGG 2 cut(s) 342, 1218
BstF5I GGATG 6 cut(s) 113, 365, 565, 823, 1267, 1482
BstFNI CGCG 4 cut(s) 68, 70, 84, 1067
BstH2I RGCGCY 1 cut(s) 105
BstHHI GCGC 3 cut(s) 70, 104, 1492
BstKTI GATC 8 cut(s) 237, 405, 622, 649, 859, 888, 1249, 1393
BstMAI GTCTC 3 cut(s) 9, 1344, 1432
BstMBI GATC 8 cut(s) 234, 402, 619, 646, 856, 885, 1246, 1390
BstMCI CGRYCG 3 cut(s) 138, 244, 571
BstNI CCWGG 2 cut(s) 528, 1503
BstSCI CCNGG 3 cut(s) 526, 1501, 1506
BstSFI CTRYAG 4 cut(s) 687, 972, 1014, 1380
BstSNI TACGTA 1 cut(s) 1206
BstUI CGCG 4 cut(s) 68, 70, 84, 1067
BstV1I GCAGC 7 cut(s) 212, 508, 701, 736, 737, 1289, 1472
BstX2I RGATCY 2 cut(s) 856, 1390
BstYI RGATCY 2 cut(s) 856, 1390
BstZI CGGCCG 2 cut(s) 135, 241
BsuRI GGCC 6 cut(s) 137, 243, 263, 1108, 1123, 1506
BtgI CCRYGG 1 cut(s) 1091
BtrI CACGTC 1 cut(s) 429
BtsCI GGATG 6 cut(s) 113, 365, 565, 823, 1267, 1482
Cac8I GCNNGC 2 cut(s) 30, 320
CaiI CAGNNNCTG 1 cut(s) 1336
CfoI GCGC 3 cut(s) 70, 104, 1492
Cfr10I RCCGGY 2 cut(s) 28, 566
Cfr13I GGNCC 2 cut(s) 1106, 1121
CseI GACGC 1 cut(s) 74
Csp6I GTAC 3 cut(s) 416, 774, 1207
CviAII CATG 4 cut(s) 1009, 1286, 1309, 1416
CviQI GTAC 3 cut(s) 416, 774, 1207
DdeI CTNAG 9 cut(s) 314, 491, 828, 875, 947, 1168, 1290, 1329, 1341
DpnI GATC 8 cut(s) 236, 404, 621, 648, 858, 887, 1248, 1392
DpnII GATC 8 cut(s) 234, 402, 619, 646, 856, 885, 1246, 1390
DraI TTTAAA 1 cut(s) 1132
DrdI GACNNNNNNGTC 1 cut(s) 197
DriI GACNNNNNGTC 1 cut(s) 77
DseDI GACNNNNNNGTC 1 cut(s) 197
EaeI YGGCCR 4 cut(s) 135, 241, 261, 1504
EagI CGGCCG 2 cut(s) 135, 241
Eam1104I CTCTTC 1 cut(s) 150
Eam1105I GACNNNNNGTC 1 cut(s) 77
EarI CTCTTC 1 cut(s) 150
Ecl136II GAGCTC 1 cut(s) 437
EclXI CGGCCG 2 cut(s) 135, 241
Eco105I TACGTA 1 cut(s) 1206
Eco24I GRGCYC 3 cut(s) 302, 439, 1513
Eco31I GGTCTC 1 cut(s) 1432
Eco52I CGGCCG 2 cut(s) 135, 241
Eco53kI GAGCTC 1 cut(s) 437
Eco57I CTGAAG 1 cut(s) 196
Eco88I CYCGRG 1 cut(s) 1118
EcoICRI GAGCTC 1 cut(s) 437
EcoNI CCTNNNNNAGG 2 cut(s) 342, 1218
EcoRII CCWGG 2 cut(s) 526, 1501
EcoT22I ATGCAT 1 cut(s) 1237
EcoT38I GRGCYC 3 cut(s) 302, 439, 1513
FaeI CATG 4 cut(s) 1012, 1289, 1312, 1419
FalI AAGNNNNNCTT 6 cut(s) 287, 319, 434, 466, 886, 918
FatI CATG 4 cut(s) 1008, 1285, 1308, 1415
FauI CCCGC 2 cut(s) 449, 634
FauNDI CATATG 3 cut(s) 412, 1438, 1494
FokI GGATG 6 cut(s) 100, 352, 572, 830, 1274, 1489
FriOI GRGCYC 3 cut(s) 302, 439, 1513
FspBI CTAG 1 cut(s) 510
GlaI GCGC 3 cut(s) 69, 103, 1491
GsaI CCCAGC 2 cut(s) 672, 866
GsuI CTGGAG 2 cut(s) 190, 1415
HaeII RGCGCY 1 cut(s) 105
HaeIII GGCC 6 cut(s) 137, 243, 263, 1108, 1123, 1506
HapII CCGG 7 cut(s) 29, 134, 282, 380, 392, 567, 1507
HgaI GACGC 1 cut(s) 74
HhaI GCGC 3 cut(s) 70, 104, 1492
Hin1II CATG 4 cut(s) 1012, 1289, 1312, 1419
Hin6I GCGC 3 cut(s) 68, 102, 1490
HinP1I GCGC 3 cut(s) 68, 102, 1490
HincII GTYRAC 1 cut(s) 762
HindII GTYRAC 1 cut(s) 762
HinfI GANTC 6 cut(s) 34, 272, 550, 1002, 1412, 1498
HpaII CCGG 7 cut(s) 29, 134, 282, 380, 392, 567, 1507
HphI GGTGA 3 cut(s) 37, 656, 1108
Hpy166II GTNNAC 2 cut(s) 762, 776
Hpy188I TCNGA 4 cut(s) 215, 1261, 1344, 1486
Hpy188III TCNNGA 7 cut(s) 155, 292, 341, 380, 392, 490, 1394
Hpy8I GTNNAC 2 cut(s) 762, 776
Hpy99I CGWCG 3 cut(s) 194, 203, 242
HpyAV CCTTC 7 cut(s) 289, 298, 313, 338, 377, 417, 912
HpyCH4III ACNGT 3 cut(s) 326, 420, 630
HpyCH4IV ACGT 4 cut(s) 258, 428, 758, 1205
HpyCH4V TGCA 9 cut(s) 322, 689, 725, 854, 982, 1054, 1217, 1235, 1303
HpyF3I CTNAG 9 cut(s) 314, 491, 828, 875, 947, 1168, 1290, 1329, 1341
HpySE526I ACGT 4 cut(s) 258, 428, 758, 1205
Hsp92II CATG 4 cut(s) 1012, 1289, 1312, 1419
HspAI GCGC 3 cut(s) 68, 102, 1490
Kpn2I TCCGGA 2 cut(s) 379, 391
KroI GCCGGC 1 cut(s) 28
KroNI GCCGGC 1 cut(s) 30
Kzo9I GATC 8 cut(s) 234, 402, 619, 646, 856, 885, 1246, 1390
LmnI GCTCC 5 cut(s) 96, 133, 209, 305, 529
Lsp1109I GCAGC 7 cut(s) 212, 508, 701, 736, 737, 1289, 1472
LweI GCATC 4 cut(s) 122, 1009, 1126, 1315
MaeI CTAG 1 cut(s) 510
MaeII ACGT 4 cut(s) 258, 428, 758, 1205
MaeIII GTNAC 6 cut(s) 361, 630, 754, 820, 910, 1201
MalI GATC 8 cut(s) 236, 404, 621, 648, 858, 887, 1248, 1392
MboI GATC 8 cut(s) 234, 402, 619, 646, 856, 885, 1246, 1390
MboII GAAGA 4 cut(s) 137, 442, 641, 701
MflI RGATCY 2 cut(s) 856, 1390
MhlI GDGCHC 4 cut(s) 302, 439, 948, 1513
MluCI AATT 3 cut(s) 780, 1432, 1443
MlyI GAGTC 1 cut(s) 1421
MmeI TCCRAC 3 cut(s) 481, 556, 1239
Mph1103I ATGCAT 1 cut(s) 1237
MreI CGCCGGCG 1 cut(s) 28
MroI TCCGGA 2 cut(s) 379, 391
MroNI GCCGGC 1 cut(s) 28
MroXI GAANNNNTTC 3 cut(s) 387, 901, 1079
MseI TTAA 6 cut(s) 966, 989, 1029, 1131, 1449, 1521
MspA1I CMGCKG 2 cut(s) 521, 692
MspI CCGG 7 cut(s) 29, 134, 282, 380, 392, 567, 1507
MspR9I CCNGG 3 cut(s) 528, 1503, 1508
MvaI CCWGG 2 cut(s) 528, 1503
MvnI CGCG 4 cut(s) 68, 70, 84, 1067
NaeI GCCGGC 1 cut(s) 30
NciI CCSGG 1 cut(s) 1508
NdeI CATATG 3 cut(s) 412, 1438, 1494
NdeII GATC 8 cut(s) 234, 402, 619, 646, 856, 885, 1246, 1390
NgoMIV GCCGGC 1 cut(s) 28
NlaIII CATG 4 cut(s) 1012, 1289, 1312, 1419
NlaIV GGNNCC 4 cut(s) 205, 286, 301, 565
NmeAIII GCCGAG 3 cut(s) 163, 165, 289
NmuCI GTSAC 3 cut(s) 361, 820, 910
NsiI ATGCAT 1 cut(s) 1237
PdiI GCCGGC 1 cut(s) 30
PdmI GAANNNNTTC 3 cut(s) 387, 901, 1079
PfeI GAWTC 5 cut(s) 34, 272, 550, 1002, 1498
PflFI GACNNNGTC 1 cut(s) 197
PleI GAGTC 1 cut(s) 1420
PpsI GAGTC 1 cut(s) 1420
Ppu21I YACGTR 2 cut(s) 259, 1206
PsiI TTATAA 1 cut(s) 786
Psp124BI GAGCTC 1 cut(s) 439
Psp6I CCWGG 2 cut(s) 526, 1501
PspFI CCCAGC 2 cut(s) 668, 862
PspGI CCWGG 2 cut(s) 526, 1501
PspN4I GGNNCC 4 cut(s) 205, 286, 301, 565
PspPI GGNCC 2 cut(s) 1106, 1121
PstI CTGCAG 1 cut(s) 691
PstNI CAGNNNCTG 1 cut(s) 1336
PsuI RGATCY 2 cut(s) 856, 1390
PsyI GACNNNGTC 1 cut(s) 197
PvuII CAGCTG 2 cut(s) 521, 692
RsaI GTAC 3 cut(s) 417, 775, 1208
RsaNI GTAC 3 cut(s) 416, 774, 1207
SacI GAGCTC 1 cut(s) 439
SaqAI TTAA 6 cut(s) 966, 989, 1029, 1131, 1449, 1521
Sau3AI GATC 8 cut(s) 234, 402, 619, 646, 856, 885, 1246, 1390
Sau96I GGNCC 2 cut(s) 1106, 1121
SchI GAGTC 1 cut(s) 1421
ScrFI CCNGG 3 cut(s) 528, 1503, 1508
SduI GDGCHC 4 cut(s) 302, 439, 948, 1513
SfaNI GCATC 4 cut(s) 122, 1009, 1126, 1315
SfcI CTRYAG 4 cut(s) 687, 972, 1014, 1380
SgrAI CRCCGGYG 1 cut(s) 28
SmlI CTYRAG 2 cut(s) 440, 554
SmoI CTYRAG 2 cut(s) 440, 554
SnaBI TACGTA 1 cut(s) 1206
Sse9I AATT 3 cut(s) 780, 1432, 1443
SsiI CCGC 8 cut(s) 15, 57, 82, 163, 244, 456, 641, 698
SspI AATATT 2 cut(s) 811, 850
SspMI CTAG 1 cut(s) 510
SstI GAGCTC 1 cut(s) 439
StyD4I CCNGG 3 cut(s) 526, 1501, 1506
TaaI ACNGT 3 cut(s) 326, 420, 630
TaiI ACGT 4 cut(s) 261, 431, 761, 1208
TaqI TCGA 2 cut(s) 156, 237
TasI AATT 3 cut(s) 780, 1432, 1443
TauI GCSGC 3 cut(s) 18, 246, 700
TfiI GAWTC 5 cut(s) 34, 272, 550, 1002, 1498
Tru1I TTAA 6 cut(s) 966, 989, 1029, 1131, 1449, 1521
Tru9I TTAA 6 cut(s) 966, 989, 1029, 1131, 1449, 1521
TseFI GTSAC 3 cut(s) 361, 820, 910
TseI GCWGC 7 cut(s) 225, 521, 689, 725, 749, 1277, 1460
Tsp45I GTSAC 3 cut(s) 361, 820, 910
TspDTI ATGAA 6 cut(s) 399, 894, 1274, 1297, 1425, 1511
TspGWI ACGGA 3 cut(s) 83, 296, 1080
Tth111I GACNNNGTC 1 cut(s) 197
XagI CCTNNNNNAGG 2 cut(s) 342, 1218
XapI RAATTY 2 cut(s) 1432, 1443
XmnI GAANNNNTTC 3 cut(s) 387, 901, 1079
XspI CTAG 1 cut(s) 510
Zsp2I ATGCAT 1 cut(s) 1237
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.