MD09G1011400.v1.1

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0012812
Physical Location & Seq
Forward (+)
753957 .. 755501
1545 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1011400.v1.1.491

Sequence Viewer

Length: 1545 bp
ATGTCTGAGATGGAAATATCCATGTCGCTCTTCACACATCCTACATTCATTGTTTTCTTAGCAATCATTCTCTATGTTTTGCATGTGCTTTTTTCGAGATTACGGCGAGTCTATGAATTTTCCTACCAAGGCCCGCCGAGGTATCCCGTCATCGGGTGCTTCATTTCCTTCTACAACAACCGCAACCGCCTCCTGGACTGGTACACCGACCTCCTTGCAAAATCAACCACCAACACCATCGTTGTGGACCGCTTCGGCGCACGGCGGACAGTAGTCACGGCCAACCCGGAAAATGTCGAGTACATGCTCAAAACCAACTTCAACAACTTCCCAAAAGGCAAACCCTTCACCGAAATTCTTGGGGACTTTTTGGGATGTGGTATATTCAATGTGGATGGCGAGGTTTGGCGCACCCAGCGCAAGTTAGCAAGTCATGAGTTCGGCACCAAGTTTCTGCGTGAATGCATGACGAAGACATTGGAGGAAGAAGTGGAAAAGAGTCTATTGCCACTGATGGAGTCGCTGGCGGAGACGGCGCAAGTGGTGGACTTGCAGGAGTTGCTAAGGAGATTCACTTTCAATGTGATTTGTAAGGTGTTTTTGGGAGTTGAGCGGTGCTGCTTGGATCCCTCTCTGCCACATCCGCCGCTTGCAAGGGCTTTTGACACGGCGTCGGAGATTTGCGCAAGGCGCGGAGCAGCTCCCATGTTCATAATTTGGAAGATTAAGAGGTGGCTTGGAGTCGGTTCGGAGCAAAAACTTAGAGCTGCGGTTGAAGAAGTTCATGCCTATGTAATGGATATAATCGAGAGGAGGAAGAGCGAGCTTGAAGCAGCTGAGACGGATAGTGGAGCTCGCAAAGACCTCCTAACGCGGCTAATAACGGCGGGGCACGAGGAGGAGGTGACGAGGGACATGGTGATAAGCTTTATCATGGCGGGGCGGGACACAACTTCAGCGGCAATGACATGGCTCTTCTGGTTGCTTTCCCGCCAACCAGGTGTGGAGGAAGATGTGGTGAAGGAGATTGGATCCGCCGGAGAAAAGATGTCGGATTTCGAGTTGTTGGAGTTGAGCTTGTTGAAGGCATGCCTTTACGAGTCCATGAGGCTTTATCCGCCTGTTGCTTGGGACTCGAAGCATGCCGTAGTTGACGACTCGTTGCCTGACGGGACTCGAGTTCGGGCCGGAGATAGAGTGACGTATTTTCCCTATGGGATGGGTAGAATGGAAGCACTGTGGGGGAAGGACCGGTTGGAATTCAAGCCGGACCGGTGGTTTCTTGAACCGGACAAGGAGAGATCAGCTCTGAAAAAGGTATGTCCCTACAGGTTGCCTATTTTCCAGGCAGGTCCAAGGGTTTGTTTGGGGAAGGACATGGCTTTTATTCAGATGAAATATGTGGTGGCTTCGATTCTCAGACGGTTCGAGATCCGACCGGTTGATTCCGGTGAGCCGGTTTTCGTGCCGCGGCTGACGGCTCACATGGCCGGCGGGTTGAAAGTTCTAATCCGCAAGAGAAGTGATGACCCAGATAAAACCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

515

Amino Acids

58.92

Weight (kDa)

7.95

Isoelectric Point (pI)

44.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 43 - 486 5.8e-62 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012812)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G01900
fragaria_vesca FvH4_6g53330
malus_domestica MD09G1011400.v1.1 MD17G1011900.v1.1
prunus_persica Prupe.3G305600_v2.0.a1
pyrus_communis pycom111g00970 pycom17g00960
rosa_chinensis RchiOBHm_Chr2g0175491
rosa_laevigata RLG00000022332
rosa_multiflora Rmu_sc0003302.1_g000003 Rmu_sc0021955.1_g000002
rosa_roxburghii Rroxscaffold_2G00077290
rosa_rugosa Rorug02G0585100
rosa_samantha Rh2AG664700 Rh2BG675400 Rh2CG638600 Rh2DG689400
rosa_wichuraiana Rw2G054480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 685
Acc36I ACCTGC 1 cut(s) 1340
AccB1I GGYRCC 1 cut(s) 443
AccBSI CCGCTC 1 cut(s) 613
AccII CGCG 3 cut(s) 693, 874, 1471
AclWI GGATC 5 cut(s) 620, 633, 1026, 1039, 1426
AcoI YGGCCR 2 cut(s) 279, 1488
AcsI RAATTY 3 cut(s) 116, 354, 1259
AcuI CTGAAG 1 cut(s) 939
AcyI GRCGYC 1 cut(s) 671
AfaI GTAC 2 cut(s) 203, 302
AfiI CCNNNNNNNGG 3 cut(s) 152, 153, 193
AgeI ACCGGT 3 cut(s) 1251, 1272, 1438
AgsI TTSAA 9 cut(s) 322, 388, 580, 776, 830, 1084, 1264, 1286, 1501
AhdI GACNNNNNGTC 1 cut(s) 670
AjnI CCWGG 3 cut(s) 192, 997, 1344
AjuI GAANNNNNNNTTGG 2 cut(s) 1238, 1270
AluBI AGCT 8 cut(s) 701, 767, 826, 836, 854, 927, 1077, 1307
AluI AGCT 8 cut(s) 701, 767, 826, 836, 854, 927, 1077, 1307
Alw21I GWGCWC 1 cut(s) 856
Alw26I GTCTC 2 cut(s) 524, 833
AlwI GGATC 5 cut(s) 620, 633, 1026, 1039, 1426
Ama87I CYCGRG 1 cut(s) 1176
AoxI GGCC 4 cut(s) 130, 279, 1185, 1488
ApeKI GCWGC 4 cut(s) 618, 698, 767, 833
ApoI RAATTY 3 cut(s) 116, 354, 1259
AsiGI ACCGGT 3 cut(s) 1251, 1272, 1438
Asp700I GAANNNNTTC 1 cut(s) 780
AspLEI GCGC 6 cut(s) 260, 411, 420, 538, 686, 693
AspS9I GGNCC 6 cut(s) 131, 247, 1185, 1249, 1270, 1352
AsuC2I CCSGG 1 cut(s) 287
AsuHPI GGTGA 5 cut(s) 340, 916, 931, 1030, 1463
AvaI CYCGRG 1 cut(s) 1176
AvaII GGWCC 4 cut(s) 247, 1249, 1270, 1352
BaeGI GKGCMC 1 cut(s) 894
BamHI GGATCC 2 cut(s) 625, 1031
BanI GGYRCC 1 cut(s) 443
BanII GRGCYC 1 cut(s) 856
BauI CACGAG 1 cut(s) 893
BbsI GAAGAC 1 cut(s) 479
Bbv12I GWGCWC 1 cut(s) 856
BbvI GCAGC 4 cut(s) 605, 710, 754, 845
BccI CCATC 5 cut(s) 4, 245, 389, 508, 1213
BceAI ACGGC 8 cut(s) 119, 278, 294, 549, 684, 900, 1130, 1494
BcgI CGANNNNNNTGC 2 cut(s) 197, 231
BciT130I CCWGG 3 cut(s) 194, 999, 1346
BciVI GTATCC 1 cut(s) 153
BcnI CCSGG 1 cut(s) 287
BcoDI GTCTC 2 cut(s) 524, 833
BfaI CTAG 1 cut(s) 1543
BfmI CTRYAG 1 cut(s) 1327
BfuAI ACCTGC 1 cut(s) 1340
BfuI GTATCC 1 cut(s) 153
BisI GCNGC 9 cut(s) 619, 647, 699, 768, 834, 875, 960, 1469, 1472
BlsI GCNGC 9 cut(s) 620, 648, 700, 769, 835, 876, 961, 1470, 1473
Bme1390I CCNGG 4 cut(s) 194, 287, 999, 1346
Bme18I GGWCC 4 cut(s) 247, 1249, 1270, 1352
BmeRI GACNNNNNGTC 1 cut(s) 670
BmeT110I CYCGRG 1 cut(s) 1176
BmgT120I GGNCC 6 cut(s) 131, 247, 1185, 1249, 1270, 1352
BmiI GGNNCC 3 cut(s) 445, 627, 1033
BmrFI CCNGG 4 cut(s) 194, 287, 999, 1346
BoxI GACNNNNGTC 1 cut(s) 272
BpiI GAAGAC 1 cut(s) 479
BplI GAGNNNNNCTC 2 cut(s) 1291, 1323
Bpu10I CCTNAGC 1 cut(s) 563
BpuMI CCSGG 1 cut(s) 287
BsaHI GRCGYC 1 cut(s) 671
BsaJI CCNNGG 4 cut(s) 127, 137, 1355, 1469
BsaWI WCCGGW 5 cut(s) 1251, 1272, 1288, 1438, 1448
BsaXI ACNNNNNCTCC 2 cut(s) 1182, 1212
Bsc4I CCNNNNNNNGG 3 cut(s) 152, 153, 193
Bse118I RCCGGY 5 cut(s) 1251, 1272, 1438, 1456, 1490
Bse1I ACTGG 1 cut(s) 203
Bse3DI GCAATG 1 cut(s) 969
BseBI CCWGG 3 cut(s) 194, 999, 1346
BseDI CCNNGG 4 cut(s) 127, 137, 1355, 1469
BseGI GGATG 5 cut(s) 37, 380, 400, 640, 1224
BseLI CCNNNNNNNGG 3 cut(s) 152, 153, 193
BseMI GCAATG 1 cut(s) 969
BseMII CTCAG 2 cut(s) 828, 1432
BseNI ACTGG 1 cut(s) 203
BseRI GAGGAG 3 cut(s) 826, 911, 914
BseSI GKGCMC 1 cut(s) 894
BseXI GCAGC 4 cut(s) 605, 710, 754, 845
BseYI CCCAGC 1 cut(s) 414
Bsh1236I CGCG 3 cut(s) 693, 874, 1471
Bsh1285I CGRYCG 1 cut(s) 1439
BshFI GGCC 4 cut(s) 132, 281, 1187, 1490
BshNI GGYRCC 1 cut(s) 443
BshTI ACCGGT 3 cut(s) 1251, 1272, 1438
BsiEI CGRYCG 1 cut(s) 1439
BsiHKAI GWGCWC 1 cut(s) 856
BsiHKCI CYCGRG 1 cut(s) 1176
BslFI GGGAC 6 cut(s) 377, 926, 959, 1145, 1186, 1308
BslI CCNNNNNNNGG 3 cut(s) 152, 153, 193
BsmAI GTCTC 2 cut(s) 524, 833
BsmBI CGTCTC 2 cut(s) 524, 833
BsmFI GGGAC 6 cut(s) 377, 926, 959, 1145, 1186, 1308
BsmI GAATGC 1 cut(s) 467
BsnI GGCC 4 cut(s) 132, 281, 1187, 1490
BsoBI CYCGRG 1 cut(s) 1176
Bsp1286I GDGCHC 2 cut(s) 856, 894
Bsp143I GATC 4 cut(s) 625, 1031, 1301, 1431
BspANI GGCC 4 cut(s) 132, 281, 1187, 1490
BspCNI CTCAG 2 cut(s) 829, 1431
BspFNI CGCG 3 cut(s) 693, 874, 1471
BspHI TCATGA 1 cut(s) 433
BspLI GGNNCC 3 cut(s) 445, 627, 1033
BspMI ACCTGC 1 cut(s) 1340
BspPI GGATC 5 cut(s) 620, 633, 1026, 1039, 1426
BspQI GCTCTTC 3 cut(s) 35, 812, 980
BspT107I GGYRCC 1 cut(s) 443
BsrBI CCGCTC 1 cut(s) 613
BsrDI GCAATG 1 cut(s) 969
BsrFI RCCGGY 5 cut(s) 1251, 1272, 1438, 1456, 1490
BsrI ACTGG 1 cut(s) 203
BssAI RCCGGY 5 cut(s) 1251, 1272, 1438, 1456, 1490
BssECI CCNNGG 4 cut(s) 127, 137, 1355, 1469
BssMI GATC 4 cut(s) 625, 1031, 1301, 1431
BssNI GRCGYC 1 cut(s) 671
BssSI CACGAG 1 cut(s) 893
BssT1I CCWWGG 2 cut(s) 127, 1355
Bst2BI CACGAG 1 cut(s) 893
Bst2UI CCWGG 3 cut(s) 194, 999, 1346
Bst4CI ACNGT 3 cut(s) 271, 1239, 1425
Bst6I CTCTTC 3 cut(s) 35, 812, 980
BstACI GRCGYC 1 cut(s) 671
BstAPI GCANNNNNTGC 1 cut(s) 559
BstC8I GCNNGC 8 cut(s) 134, 525, 651, 824, 856, 1090, 1143, 1492
BstDEI CTNAG 6 cut(s) 6, 58, 563, 761, 837, 1418
BstDSI CCRYGG 1 cut(s) 1469
BstF5I GGATG 5 cut(s) 37, 380, 400, 640, 1224
BstFNI CGCG 3 cut(s) 693, 874, 1471
BstHHI GCGC 6 cut(s) 260, 411, 420, 538, 686, 693
BstKTI GATC 4 cut(s) 628, 1034, 1304, 1434
BstMAI GTCTC 2 cut(s) 524, 833
BstMBI GATC 4 cut(s) 625, 1031, 1301, 1431
BstMCI CGRYCG 1 cut(s) 1439
BstMWI GCNNNNNNNGC 8 cut(s) 415, 417, 533, 559, 643, 690, 1117, 1487
BstNI CCWGG 3 cut(s) 194, 999, 1346
BstNSI RCATGY 4 cut(s) 86, 307, 1092, 1145
BstPAI GACNNNNGTC 1 cut(s) 272
BstSCI CCNGG 4 cut(s) 192, 285, 997, 1344
BstSFI CTRYAG 1 cut(s) 1327
BstSLI GKGCMC 1 cut(s) 894
BstUI CGCG 3 cut(s) 693, 874, 1471
BstV1I GCAGC 4 cut(s) 605, 710, 754, 845
BstV2I GAAGAC 1 cut(s) 479
BstX2I RGATCY 3 cut(s) 625, 1031, 1431
BstXI CCANNNNNNTGG 1 cut(s) 244
BstYI RGATCY 3 cut(s) 625, 1031, 1431
BsuI GTATCC 1 cut(s) 153
BsuRI GGCC 4 cut(s) 132, 281, 1187, 1490
BtgI CCRYGG 1 cut(s) 1469
BtsCI GGATG 5 cut(s) 37, 380, 400, 640, 1224
BtsIMutI CAGTG 2 cut(s) 509, 1235
BveI ACCTGC 1 cut(s) 1340
Cac8I GCNNGC 8 cut(s) 134, 525, 651, 824, 856, 1090, 1143, 1492
CciI TCATGA 1 cut(s) 433
CfoI GCGC 6 cut(s) 260, 411, 420, 538, 686, 693
Cfr10I RCCGGY 5 cut(s) 1251, 1272, 1438, 1456, 1490
Cfr13I GGNCC 6 cut(s) 131, 247, 1185, 1249, 1270, 1352
Cfr42I CCGCGG 1 cut(s) 1472
CpoI CGGWCCG 1 cut(s) 1270
CseI GACGC 1 cut(s) 660
CsiI ACCWGGT 1 cut(s) 997
Csp6I GTAC 2 cut(s) 202, 301
CspAI ACCGGT 3 cut(s) 1251, 1272, 1438
CspI CGGWCCG 1 cut(s) 1270
CviQI GTAC 2 cut(s) 202, 301
DdeI CTNAG 6 cut(s) 6, 58, 563, 761, 837, 1418
DpnI GATC 4 cut(s) 627, 1033, 1303, 1433
DpnII GATC 4 cut(s) 625, 1031, 1301, 1431
DriI GACNNNNNGTC 1 cut(s) 670
EaeI YGGCCR 2 cut(s) 279, 1488
Eam1104I CTCTTC 3 cut(s) 35, 812, 980
Eam1105I GACNNNNNGTC 1 cut(s) 670
EarI CTCTTC 3 cut(s) 35, 812, 980
EciI GGCGGA 5 cut(s) 280, 542, 633, 1024, 1107
Ecl136II GAGCTC 1 cut(s) 854
Eco130I CCWWGG 2 cut(s) 127, 1355
Eco24I GRGCYC 1 cut(s) 856
Eco47I GGWCC 4 cut(s) 247, 1249, 1270, 1352
Eco53kI GAGCTC 1 cut(s) 854
Eco57I CTGAAG 1 cut(s) 939
Eco88I CYCGRG 1 cut(s) 1176
EcoICRI GAGCTC 1 cut(s) 854
EcoRI GAATTC 1 cut(s) 1259
EcoRII CCWGG 3 cut(s) 192, 997, 1344
EcoT14I CCWWGG 2 cut(s) 127, 1355
EcoT22I ATGCAT 1 cut(s) 467
EcoT38I GRGCYC 1 cut(s) 856
ErhI CCWWGG 2 cut(s) 127, 1355
Esp3I CGTCTC 2 cut(s) 524, 833
FaqI GGGAC 6 cut(s) 377, 926, 959, 1145, 1186, 1308
FauI CCCGC 6 cut(s) 141, 880, 931, 936, 998, 1487
Fnu4HI GCNGC 9 cut(s) 619, 647, 699, 768, 834, 875, 960, 1469, 1472
FokI GGATG 5 cut(s) 24, 387, 407, 627, 1231
FriOI GRGCYC 1 cut(s) 856
Fsp4HI GCNGC 9 cut(s) 619, 647, 699, 768, 834, 875, 960, 1469, 1472
FspBI CTAG 1 cut(s) 1543
FspI TGCGCA 1 cut(s) 685
GlaI GCGC 6 cut(s) 259, 410, 419, 537, 685, 692
GluI GCNGC 9 cut(s) 619, 647, 699, 768, 834, 875, 960, 1469, 1472
GsaI CCCAGC 1 cut(s) 418
HaeIII GGCC 4 cut(s) 132, 281, 1187, 1490
HgaI GACGC 1 cut(s) 660
HhaI GCGC 6 cut(s) 260, 411, 420, 538, 686, 693
Hin1I GRCGYC 1 cut(s) 671
Hin6I GCGC 6 cut(s) 258, 409, 418, 536, 684, 691
HinP1I GCGC 6 cut(s) 258, 409, 418, 536, 684, 691
HincII GTYRAC 1 cut(s) 1153
HindII GTYRAC 1 cut(s) 1153
HindIII AAGCTT 1 cut(s) 925
HphI GGTGA 5 cut(s) 340, 916, 931, 1030, 1463
Hpy166II GTNNAC 4 cut(s) 204, 247, 547, 1153
Hpy188I TCNGA 8 cut(s) 7, 676, 751, 1054, 1311, 1392, 1421, 1436
Hpy188III TCNNGA 5 cut(s) 96, 434, 808, 1283, 1429
Hpy8I GTNNAC 4 cut(s) 204, 247, 547, 1153
Hpy99I CGWCG 1 cut(s) 676
HpyAV CCTTC 6 cut(s) 178, 355, 1015, 1078, 1240, 1366
HpyCH4III ACNGT 3 cut(s) 271, 1239, 1425
HpyCH4IV ACGT 1 cut(s) 1202
HpyCH4V TGCA 5 cut(s) 82, 218, 465, 553, 653
HpyF10VI GCNNNNNNNGC 8 cut(s) 415, 417, 533, 559, 643, 690, 1117, 1487
HpyF3I CTNAG 6 cut(s) 6, 58, 563, 761, 837, 1418
HpySE526I ACGT 1 cut(s) 1202
Hsp92I GRCGYC 1 cut(s) 671
HspAI GCGC 6 cut(s) 258, 409, 418, 536, 684, 691
KroI GCCGGC 1 cut(s) 1490
KroNI GCCGGC 1 cut(s) 1492
KspI CCGCGG 1 cut(s) 1472
Kzo9I GATC 4 cut(s) 625, 1031, 1301, 1431
LguI GCTCTTC 3 cut(s) 35, 812, 980
LmnI GCTCC 4 cut(s) 695, 706, 751, 851
Lsp1109I GCAGC 4 cut(s) 605, 710, 754, 845
MabI ACCWGGT 1 cut(s) 997
MaeI CTAG 1 cut(s) 1543
MaeII ACGT 1 cut(s) 1202
MaeIII GTNAC 3 cut(s) 274, 904, 1198
MalI GATC 4 cut(s) 627, 1033, 1303, 1433
MbiI CCGCTC 1 cut(s) 613
MboI GATC 4 cut(s) 625, 1031, 1301, 1431
MboII GAAGA 8 cut(s) 22, 484, 497, 733, 788, 829, 967, 1022
MflI RGATCY 3 cut(s) 625, 1031, 1431
MhlI GDGCHC 2 cut(s) 856, 894
MluCI AATT 4 cut(s) 116, 354, 714, 1259
MlyI GAGTC 8 cut(s) 117, 508, 527, 750, 1109, 1127, 1151, 1168
MmeI TCCRAC 5 cut(s) 654, 1032, 1047, 1236, 1459
Mph1103I ATGCAT 1 cut(s) 467
MroNI GCCGGC 1 cut(s) 1490
MroXI GAANNNNTTC 1 cut(s) 780
MseI TTAA 1 cut(s) 726
MslI CAYNNNNRTG 2 cut(s) 242, 789
MspA1I CMGCKG 3 cut(s) 836, 959, 1471
MspR9I CCNGG 4 cut(s) 194, 287, 999, 1346
Mva1269I GAATGC 1 cut(s) 467
MvaI CCWGG 3 cut(s) 194, 999, 1346
MvnI CGCG 3 cut(s) 693, 874, 1471
MwoI GCNNNNNNNGC 8 cut(s) 415, 417, 533, 559, 643, 690, 1117, 1487
NaeI GCCGGC 1 cut(s) 1492
NciI CCSGG 1 cut(s) 287
NdeII GATC 4 cut(s) 625, 1031, 1301, 1431
NgoMIV GCCGGC 1 cut(s) 1490
NlaIV GGNNCC 3 cut(s) 445, 627, 1033
NmeAIII GCCGAG 1 cut(s) 162
NmuCI GTSAC 3 cut(s) 274, 904, 1198
NsbI TGCGCA 1 cut(s) 685
NsiI ATGCAT 1 cut(s) 467
NspI RCATGY 4 cut(s) 86, 307, 1092, 1145
PaeI GCATGC 2 cut(s) 1092, 1145
PaeR7I CTCGAG 1 cut(s) 1176
PagI TCATGA 1 cut(s) 433
PciSI GCTCTTC 3 cut(s) 35, 812, 980
PctI GAATGC 1 cut(s) 467
PdiI GCCGGC 1 cut(s) 1492
PdmI GAANNNNTTC 1 cut(s) 780
PfeI GAWTC 3 cut(s) 570, 1414, 1445
PfoI TCCNGGA 1 cut(s) 192
PinAI ACCGGT 3 cut(s) 1251, 1272, 1438
PkrI GCNGC 9 cut(s) 620, 648, 700, 769, 835, 876, 961, 1470, 1473
PleI GAGTC 8 cut(s) 116, 507, 526, 749, 1108, 1127, 1151, 1168
PpsI GAGTC 8 cut(s) 116, 507, 526, 749, 1108, 1127, 1151, 1168
PshAI GACNNNNGTC 1 cut(s) 272
Psp124BI GAGCTC 1 cut(s) 856
Psp6I CCWGG 3 cut(s) 192, 997, 1344
PspFI CCCAGC 1 cut(s) 414
PspGI CCWGG 3 cut(s) 192, 997, 1344
PspN4I GGNNCC 3 cut(s) 445, 627, 1033
PspPI GGNCC 6 cut(s) 131, 247, 1185, 1249, 1270, 1352
PspXI VCTCGAGB 1 cut(s) 1176
PsuI RGATCY 3 cut(s) 625, 1031, 1431
PvuII CAGCTG 1 cut(s) 836
RsaI GTAC 2 cut(s) 203, 302
RsaNI GTAC 2 cut(s) 202, 301
RseI CAYNNNNRTG 2 cut(s) 242, 789
Rsr2I CGGWCCG 1 cut(s) 1270
RsrII CGGWCCG 1 cut(s) 1270
SacI GAGCTC 1 cut(s) 856
SacII CCGCGG 1 cut(s) 1472
SapI GCTCTTC 3 cut(s) 35, 812, 980
SaqAI TTAA 1 cut(s) 726
SatI GCNGC 9 cut(s) 619, 647, 699, 768, 834, 875, 960, 1469, 1472
Sau3AI GATC 4 cut(s) 625, 1031, 1301, 1431
Sau96I GGNCC 6 cut(s) 131, 247, 1185, 1249, 1270, 1352
SchI GAGTC 8 cut(s) 117, 508, 527, 750, 1109, 1127, 1151, 1168
ScrFI CCNGG 4 cut(s) 194, 287, 999, 1346
SduI GDGCHC 2 cut(s) 856, 894
SexAI ACCWGGT 1 cut(s) 997
SfcI CTRYAG 1 cut(s) 1327
Sfr274I CTCGAG 1 cut(s) 1176
Sfr303I CCGCGG 1 cut(s) 1472
SgrBI CCGCGG 1 cut(s) 1472
SinI GGWCC 4 cut(s) 247, 1249, 1270, 1352
SlaI CTCGAG 1 cut(s) 1176
SmiMI CAYNNNNRTG 2 cut(s) 242, 789
SmlI CTYRAG 1 cut(s) 1176
SmoI CTYRAG 1 cut(s) 1176
SphI GCATGC 2 cut(s) 1092, 1145
Sse9I AATT 4 cut(s) 116, 354, 714, 1259
SspMI CTAG 1 cut(s) 1543
SstI GAGCTC 1 cut(s) 856
StyD4I CCNGG 4 cut(s) 192, 285, 997, 1344
StyI CCWWGG 2 cut(s) 127, 1355
TaaI ACNGT 3 cut(s) 271, 1239, 1425
TaiI ACGT 1 cut(s) 1205
TaqI TCGA 8 cut(s) 95, 297, 807, 1059, 1136, 1177, 1412, 1428
TasI AATT 4 cut(s) 116, 354, 714, 1259
TatI WGTACW 1 cut(s) 300
TauI GCSGC 5 cut(s) 649, 877, 962, 1471, 1474
TfiI GAWTC 3 cut(s) 570, 1414, 1445
Tru1I TTAA 1 cut(s) 726
Tru9I TTAA 1 cut(s) 726
TscAI CASTG 2 cut(s) 516, 1242
TseFI GTSAC 3 cut(s) 274, 904, 1198
TseI GCWGC 4 cut(s) 618, 698, 767, 833
Tsp45I GTSAC 3 cut(s) 274, 904, 1198
TspDTI ATGAA 6 cut(s) 37, 129, 151, 700, 773, 1409
TspGWI ACGGA 1 cut(s) 857
TspRI CASTG 2 cut(s) 516, 1242
VpaK11BI GGWCC 4 cut(s) 247, 1249, 1270, 1352
XapI RAATTY 3 cut(s) 116, 354, 1259
XceI RCATGY 4 cut(s) 86, 307, 1092, 1145
XhoI CTCGAG 1 cut(s) 1176
XmnI GAANNNNTTC 1 cut(s) 780
XspI CTAG 1 cut(s) 1543
Zsp2I ATGCAT 1 cut(s) 467
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.