Rmu_sc0021955.1_g000002

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0021955.1
Physical Location & Seq
Reverse (-)
2413 .. 3897
1485 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0021955.1_g000002.1.cds

Sequence Viewer

Length: 1485 bp
atgattctctacttcctggtgcaagtgatttttggtaaattccggcgagaagcctatgagctttccggccctccaagccatcctctcattggttgcttagtctcattttacaagaaccgcttccggctactggactggtacaccgagctccttgcggactcggccaccagcaccatcgtcgtgagccggctcggcgcccgacgtaccatagtcacagccaacccggaaaatgtcgaatacatgctgaaaaccaacttcaacaacttcccaaaaggcaaacccttcactgaaatccttggagactttcttggatgtggaatattcaatgtggacggcgagctttggctcacgcagcgcaagttagccagccacgagttcggcacgaagtctttgcgtgagtacatcatgaacagcttggaggaagaagtcgaaaagggcttattgccattgatggagtcactagctatgaaaggagaagtagtagacttgcaggagttgttgaggagattcgcgttcaatgtgatttgcaaggtgtttttgggggttgagaggtgctctttggatccctctttgcctgttccacaactcgcaagggctttcgacacggcgtcggagatctgtgcaatgcgtggggctgcccctgtgttcataatatggaagatcaagaggtggcttgggattggttcggagcagaaacttaaagctgcggtggaagaagtacatgcctatgtcatgaacataatagagacgaggaggcagaaacttgatcatgatcaaagttccgggactagtatagatcaagatcaagatcaagatctgctaactcggttaataatggcgggacatgaagacgaggtgacaagggacatggtaataagctttataatggcggggagggacactacttcagcagccatgacgtggctcttctggttgatttcccgccatcaaactgtagaggaagatttggtgaaagagattgaagacaatcaaagaacgatggatttcgagtcattggatttcagattactaaaggcatgcctttttgaatccatgaggctctttccacctgtggcttgggactcaaagcatgccaaagttcatgacttattgccggatggcactcatgtccgggccggagatagagtgacctattttccctacggaatgggaagaatggagtcgctgtgggggaaggaccggctggaattcaagccagaccggtggtttctcgaaccggacaaggagacgagatcagagctgaaaaaggtatgcccatacaagttgccgatttttcaagcaggtccaagggtttgtcttgggaaggaaatggcttttactcagatgaaatatgtgatggcttccattcttagacggttcgaaatcagaccggtctactccgacgatccggttttcgtgccacgcctgacggcccacatggccggcgggttgaaggttctggtccgcaagagagggactaactga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

494

Amino Acids

56.8

Weight (kDa)

7.14

Isoelectric Point (pI)

43.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012812)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 884
Acc36I ACCTGC 1 cut(s) 1292
AccB1I GGYRCC 1 cut(s) 194
AccB7I CCANNNNNTGG 1 cut(s) 921
AccI GTMKAC 2 cut(s) 483, 1395
AccII CGCG 1 cut(s) 512
AciI CCGC 8 cut(s) 118, 155, 707, 839, 890, 943, 1446, 1465
AclWI GGATC 3 cut(s) 557, 570, 1400
AcoI YGGCCR 2 cut(s) 162, 1440
AcsI RAATTY 2 cut(s) 38, 1208
AcuI CTGAAG 1 cut(s) 891
AcyI GRCGYC 2 cut(s) 195, 608
AfaI GTAC 4 cut(s) 140, 205, 401, 720
AfiI CCNNNNNNNGG 3 cut(s) 89, 130, 921
AgeI ACCGGT 2 cut(s) 1221, 1390
AgsI TTSAA 8 cut(s) 259, 325, 517, 983, 1049, 1213, 1298, 1453
AhdI GACNNNNNGTC 1 cut(s) 607
AhlI ACTAGT 1 cut(s) 788
AjiI CACGTC 1 cut(s) 921
AjnI CCWGG 1 cut(s) 15
AluBI AGCT 8 cut(s) 61, 148, 340, 414, 464, 704, 879, 1261
AluI AGCT 8 cut(s) 61, 148, 340, 414, 464, 704, 879, 1261
Alw21I GWGCWC 2 cut(s) 150, 557
Alw26I GTCTC 4 cut(s) 106, 294, 740, 1241
AlwI GGATC 3 cut(s) 557, 570, 1400
AoxI GGCC 5 cut(s) 67, 162, 1134, 1431, 1440
ApeKI GCWGC 4 cut(s) 352, 635, 704, 911
ApoI RAATTY 2 cut(s) 38, 1208
AsiGI ACCGGT 2 cut(s) 1221, 1390
Asp700I GAANNNNTTC 1 cut(s) 119
AspLEI GCGC 2 cut(s) 197, 357
AspS9I GGNCC 6 cut(s) 68, 1134, 1198, 1304, 1432, 1462
AsuC2I CCSGG 3 cut(s) 224, 784, 1133
AsuHPI GGTGA 2 cut(s) 868, 982
AsuII TTCGAA 1 cut(s) 1380
AvaII GGWCC 3 cut(s) 1198, 1304, 1462
BamHI GGATCC 1 cut(s) 562
BanI GGYRCC 1 cut(s) 194
BanII GRGCYC 1 cut(s) 150
BauI CACGAG 1 cut(s) 371
BbsI GAAGAC 2 cut(s) 855, 990
Bbv12I GWGCWC 2 cut(s) 150, 557
BbvI GCAGC 4 cut(s) 364, 622, 691, 923
BccI CCATC 7 cut(s) 87, 182, 445, 954, 994, 1112, 1351
BceAI ACGGC 3 cut(s) 349, 621, 1446
BcgI CGANNNNNNTGC 6 cut(s) 134, 160, 168, 194, 373, 407
BciT130I CCWGG 1 cut(s) 17
BclI TGATCA 2 cut(s) 766, 772
BcnI CCSGG 3 cut(s) 224, 784, 1133
BcoDI GTCTC 4 cut(s) 106, 294, 740, 1241
BcuI ACTAGT 1 cut(s) 788
BfaI CTAG 2 cut(s) 461, 789
BfmI CTRYAG 1 cut(s) 954
BfoI RGCGCY 1 cut(s) 198
BfuAI ACCTGC 1 cut(s) 1292
BglI GCCNNNNNGGC 2 cut(s) 192, 1439
BglII AGATCT 2 cut(s) 615, 814
BisI GCNGC 4 cut(s) 353, 636, 705, 912
BlsI GCNGC 4 cut(s) 354, 637, 706, 913
Bme1390I CCNGG 4 cut(s) 17, 224, 784, 1133
Bme18I GGWCC 3 cut(s) 1198, 1304, 1462
BmeRI GACNNNNNGTC 1 cut(s) 607
BmgBI CACGTC 1 cut(s) 921
BmgT120I GGNCC 6 cut(s) 68, 1134, 1198, 1304, 1432, 1462
BmiI GGNNCC 2 cut(s) 196, 564
BmrFI CCNGG 4 cut(s) 17, 224, 784, 1133
BpiI GAAGAC 2 cut(s) 855, 990
BplI GAGNNNNNCTC 2 cut(s) 539, 571
Bpu14I TTCGAA 1 cut(s) 1380
BpuMI CCSGG 3 cut(s) 224, 784, 1133
BsaBI GATNNNNATC 4 cut(s) 771, 801, 807, 813
BsaHI GRCGYC 2 cut(s) 195, 608
BsaJI CCNNGG 2 cut(s) 295, 1307
BsaWI WCCGGW 4 cut(s) 1221, 1237, 1390, 1408
BsaXI ACNNNNNCTCC 6 cut(s) 465, 495, 1131, 1161, 1172, 1202
Bsc4I CCNNNNNNNGG 3 cut(s) 89, 130, 921
Bse118I RCCGGY 5 cut(s) 186, 1200, 1221, 1390, 1442
Bse1I ACTGG 2 cut(s) 135, 140
Bse3DI GCAATG 1 cut(s) 630
Bse8I GATNNNNATC 4 cut(s) 771, 801, 807, 813
BseBI CCWGG 1 cut(s) 17
BseDI CCNNGG 2 cut(s) 295, 1307
BseGI GGATG 3 cut(s) 79, 317, 1123
BseJI GATNNNNATC 4 cut(s) 771, 801, 807, 813
BseLI CCNNNNNNNGG 3 cut(s) 89, 130, 921
BseMI GCAATG 1 cut(s) 630
BseMII CTCAG 1 cut(s) 1355
BseNI ACTGG 2 cut(s) 135, 140
BseRI GAGGAG 2 cut(s) 517, 766
BseXI GCAGC 4 cut(s) 364, 622, 691, 923
Bsh1236I CGCG 1 cut(s) 512
BshFI GGCC 5 cut(s) 69, 164, 1136, 1433, 1442
BshNI GGYRCC 1 cut(s) 194
BshTI ACCGGT 2 cut(s) 1221, 1390
BsiHKAI GWGCWC 2 cut(s) 150, 557
BslFI GGGAC 5 cut(s) 799, 855, 878, 911, 1094
BslI CCNNNNNNNGG 3 cut(s) 89, 130, 921
BsmAI GTCTC 4 cut(s) 106, 294, 740, 1241
BsmBI CGTCTC 2 cut(s) 740, 1241
BsmFI GGGAC 5 cut(s) 799, 855, 878, 911, 1094
BsnI GGCC 5 cut(s) 69, 164, 1136, 1433, 1442
Bsp119I TTCGAA 1 cut(s) 1380
Bsp1286I GDGCHC 2 cut(s) 150, 557
BspACI CCGC 8 cut(s) 118, 155, 707, 839, 890, 943, 1446, 1465
BspANI GGCC 5 cut(s) 69, 164, 1136, 1433, 1442
BspCNI CTCAG 1 cut(s) 1354
BspFNI CGCG 1 cut(s) 512
BspHI TCATGA 4 cut(s) 405, 732, 769, 1102
BspLI GGNNCC 2 cut(s) 196, 564
BspMI ACCTGC 1 cut(s) 1292
BspPI GGATC 3 cut(s) 557, 570, 1400
BspQI GCTCTTC 1 cut(s) 932
BspT104I TTCGAA 1 cut(s) 1380
BspT107I GGYRCC 1 cut(s) 194
BsrDI GCAATG 1 cut(s) 630
BsrFI RCCGGY 5 cut(s) 186, 1200, 1221, 1390, 1442
BsrI ACTGG 2 cut(s) 135, 140
BssAI RCCGGY 5 cut(s) 186, 1200, 1221, 1390, 1442
BssECI CCNNGG 2 cut(s) 295, 1307
BssNI GRCGYC 2 cut(s) 195, 608
BssSI CACGAG 1 cut(s) 371
BssT1I CCWWGG 2 cut(s) 295, 1307
Bst2BI CACGAG 1 cut(s) 371
Bst2UI CCWGG 1 cut(s) 17
Bst4CI ACNGT 2 cut(s) 955, 1377
Bst6I CTCTTC 1 cut(s) 932
BstACI GRCGYC 2 cut(s) 195, 608
BstBI TTCGAA 1 cut(s) 1380
BstC8I GCNNGC 6 cut(s) 188, 338, 367, 1039, 1092, 1444
BstDEI CTNAG 3 cut(s) 97, 1341, 1370
BstF5I GGATG 3 cut(s) 79, 317, 1123
BstFNI CGCG 1 cut(s) 512
BstH2I RGCGCY 1 cut(s) 198
BstHHI GCGC 2 cut(s) 197, 357
BstMAI GTCTC 4 cut(s) 106, 294, 740, 1241
BstMWI GCNNNNNNNGC 5 cut(s) 75, 161, 192, 352, 1439
BstNI CCWGG 1 cut(s) 17
BstNSI RCATGY 4 cut(s) 244, 725, 1041, 1094
BstSCI CCNGG 4 cut(s) 15, 222, 782, 1131
BstSFI CTRYAG 1 cut(s) 954
BstUI CGCG 1 cut(s) 512
BstV1I GCAGC 4 cut(s) 364, 622, 691, 923
BstV2I GAAGAC 2 cut(s) 855, 990
BstX2I RGATCY 3 cut(s) 562, 615, 814
BstXI CCANNNNNNTGG 1 cut(s) 1224
BstYI RGATCY 3 cut(s) 562, 615, 814
BsuRI GGCC 5 cut(s) 69, 164, 1136, 1433, 1442
BtrI CACGTC 1 cut(s) 921
BtsCI GGATG 3 cut(s) 79, 317, 1123
BtsIMutI CAGTG 1 cut(s) 285
BveI ACCTGC 1 cut(s) 1292
Cac8I GCNNGC 6 cut(s) 188, 338, 367, 1039, 1092, 1444
CciI TCATGA 4 cut(s) 405, 732, 769, 1102
CfoI GCGC 2 cut(s) 197, 357
Cfr10I RCCGGY 5 cut(s) 186, 1200, 1221, 1390, 1442
Cfr13I GGNCC 6 cut(s) 68, 1134, 1198, 1304, 1432, 1462
CseI GACGC 1 cut(s) 597
Csp6I GTAC 4 cut(s) 139, 204, 400, 719
CspAI ACCGGT 2 cut(s) 1221, 1390
CviQI GTAC 4 cut(s) 139, 204, 400, 719
DdeI CTNAG 3 cut(s) 97, 1341, 1370
DinI GGCGCC 1 cut(s) 196
DriI GACNNNNNGTC 1 cut(s) 607
EaeI YGGCCR 2 cut(s) 162, 1440
Eam1104I CTCTTC 1 cut(s) 932
Eam1105I GACNNNNNGTC 1 cut(s) 607
EarI CTCTTC 1 cut(s) 932
Ecl136II GAGCTC 1 cut(s) 148
Eco130I CCWWGG 2 cut(s) 295, 1307
Eco24I GRGCYC 1 cut(s) 150
Eco47I GGWCC 3 cut(s) 1198, 1304, 1462
Eco53kI GAGCTC 1 cut(s) 148
Eco57I CTGAAG 1 cut(s) 891
EcoICRI GAGCTC 1 cut(s) 148
EcoRI GAATTC 1 cut(s) 1208
EcoRII CCWGG 1 cut(s) 15
EcoT14I CCWWGG 2 cut(s) 295, 1307
EcoT38I GRGCYC 1 cut(s) 150
EgeI GGCGCC 1 cut(s) 196
EheI GGCGCC 1 cut(s) 196
ErhI CCWWGG 2 cut(s) 295, 1307
Esp3I CGTCTC 2 cut(s) 740, 1241
FalI AAGNNNNNCTT 2 cut(s) 104, 136
FaqI GGGAC 5 cut(s) 799, 855, 878, 911, 1094
FauI CCCGC 4 cut(s) 832, 883, 950, 1439
FbaI TGATCA 2 cut(s) 766, 772
FblI GTMKAC 2 cut(s) 483, 1395
Fnu4HI GCNGC 4 cut(s) 353, 636, 705, 912
FokI GGATG 3 cut(s) 66, 324, 1130
FriOI GRGCYC 1 cut(s) 150
Fsp4HI GCNGC 4 cut(s) 353, 636, 705, 912
FspBI CTAG 2 cut(s) 461, 789
GlaI GCGC 2 cut(s) 196, 356
GluI GCNGC 4 cut(s) 353, 636, 705, 912
HaeII RGCGCY 1 cut(s) 198
HaeIII GGCC 5 cut(s) 69, 164, 1136, 1433, 1442
HgaI GACGC 1 cut(s) 597
HhaI GCGC 2 cut(s) 197, 357
Hin1I GRCGYC 2 cut(s) 195, 608
Hin6I GCGC 2 cut(s) 195, 355
HinP1I GCGC 2 cut(s) 195, 355
HindIII AAGCTT 1 cut(s) 877
HinfI GANTC 8 cut(s) 4, 158, 455, 507, 1010, 1049, 1082, 1181
HphI GGTGA 2 cut(s) 868, 982
Hpy166II GTNNAC 4 cut(s) 141, 331, 484, 1396
Hpy188I TCNGA 7 cut(s) 613, 688, 1025, 1258, 1344, 1388, 1402
Hpy8I GTNNAC 4 cut(s) 141, 331, 484, 1396
Hpy99I CGWCG 4 cut(s) 182, 204, 613, 1406
HpyAV CCTTC 4 cut(s) 292, 1189, 1318, 1447
HpyCH4III ACNGT 2 cut(s) 955, 1377
HpyCH4IV ACGT 2 cut(s) 202, 920
HpyCH4V TGCA 4 cut(s) 22, 490, 528, 623
HpyF10VI GCNNNNNNNGC 5 cut(s) 75, 161, 192, 352, 1439
HpyF3I CTNAG 3 cut(s) 97, 1341, 1370
HpySE526I ACGT 2 cut(s) 202, 920
Hsp92I GRCGYC 2 cut(s) 195, 608
HspAI GCGC 2 cut(s) 195, 355
KasI GGCGCC 1 cut(s) 194
KroI GCCGGC 2 cut(s) 186, 1442
KroNI GCCGGC 2 cut(s) 188, 1444
Ksp22I TGATCA 2 cut(s) 766, 772
LguI GCTCTTC 1 cut(s) 932
LmnI GCTCC 2 cut(s) 153, 688
Lsp1109I GCAGC 4 cut(s) 364, 622, 691, 923
MaeI CTAG 2 cut(s) 461, 789
MaeII ACGT 2 cut(s) 202, 920
MaeIII GTNAC 4 cut(s) 211, 456, 856, 1147
MboII GAAGA 8 cut(s) 434, 670, 725, 860, 919, 974, 995, 1185
MflI RGATCY 3 cut(s) 562, 615, 814
MhlI GDGCHC 2 cut(s) 150, 557
MluCI AATT 2 cut(s) 38, 1208
Mly113I GGCGCC 1 cut(s) 195
MlyI GAGTC 5 cut(s) 152, 464, 1019, 1076, 1190
MmeI TCCRAC 2 cut(s) 591, 1425
MroNI GCCGGC 2 cut(s) 186, 1442
MroXI GAANNNNTTC 1 cut(s) 119
MseI TTAA 2 cut(s) 699, 830
MslI CAYNNNNRTG 2 cut(s) 179, 726
MspR9I CCNGG 4 cut(s) 17, 224, 784, 1133
MvaI CCWGG 1 cut(s) 17
MvnI CGCG 1 cut(s) 512
MwoI GCNNNNNNNGC 5 cut(s) 75, 161, 192, 352, 1439
NaeI GCCGGC 2 cut(s) 188, 1444
NarI GGCGCC 1 cut(s) 195
NciI CCSGG 3 cut(s) 224, 784, 1133
NgoMIV GCCGGC 2 cut(s) 186, 1442
NlaIV GGNNCC 2 cut(s) 196, 564
NmeAIII GCCGAG 2 cut(s) 140, 171
NmuCI GTSAC 4 cut(s) 211, 456, 856, 1147
NspI RCATGY 4 cut(s) 244, 725, 1041, 1094
NspV TTCGAA 1 cut(s) 1380
PaeI GCATGC 2 cut(s) 1041, 1094
PagI TCATGA 4 cut(s) 405, 732, 769, 1102
PciSI GCTCTTC 1 cut(s) 932
PdiI GCCGGC 2 cut(s) 188, 1444
PdmI GAANNNNTTC 1 cut(s) 119
PfeI GAWTC 3 cut(s) 4, 507, 1049
PflMI CCANNNNNTGG 1 cut(s) 921
PfoI TCCNGGA 1 cut(s) 782
PinAI ACCGGT 2 cut(s) 1221, 1390
PkrI GCNGC 4 cut(s) 354, 637, 706, 913
PleI GAGTC 5 cut(s) 152, 463, 1018, 1076, 1189
PluTI GGCGCC 1 cut(s) 198
PpsI GAGTC 5 cut(s) 152, 463, 1018, 1076, 1189
PsiI TTATAA 1 cut(s) 884
Psp124BI GAGCTC 1 cut(s) 150
Psp6I CCWGG 1 cut(s) 15
PspGI CCWGG 1 cut(s) 15
PspN4I GGNNCC 2 cut(s) 196, 564
PspPI GGNCC 6 cut(s) 68, 1134, 1198, 1304, 1432, 1462
PsuI RGATCY 3 cut(s) 562, 615, 814
RsaI GTAC 4 cut(s) 140, 205, 401, 720
RsaNI GTAC 4 cut(s) 139, 204, 400, 719
RseI CAYNNNNRTG 2 cut(s) 179, 726
SacI GAGCTC 1 cut(s) 150
SapI GCTCTTC 1 cut(s) 932
SaqAI TTAA 2 cut(s) 699, 830
SatI GCNGC 4 cut(s) 353, 636, 705, 912
Sau96I GGNCC 6 cut(s) 68, 1134, 1198, 1304, 1432, 1462
SchI GAGTC 5 cut(s) 152, 464, 1019, 1076, 1190
ScrFI CCNGG 4 cut(s) 17, 224, 784, 1133
SduI GDGCHC 2 cut(s) 150, 557
SfcI CTRYAG 1 cut(s) 954
SfiI GGCCNNNNNGGCC 1 cut(s) 1439
SfoI GGCGCC 1 cut(s) 196
SfuI TTCGAA 1 cut(s) 1380
SinI GGWCC 3 cut(s) 1198, 1304, 1462
SmiMI CAYNNNNRTG 2 cut(s) 179, 726
SpeI ACTAGT 1 cut(s) 788
SphI GCATGC 2 cut(s) 1041, 1094
Sse9I AATT 2 cut(s) 38, 1208
SsiI CCGC 8 cut(s) 118, 155, 707, 839, 890, 943, 1446, 1465
SspDI GGCGCC 1 cut(s) 194
SspI AATATT 1 cut(s) 321
SspMI CTAG 2 cut(s) 461, 789
SstI GAGCTC 1 cut(s) 150
StyD4I CCNGG 4 cut(s) 15, 222, 782, 1131
StyI CCWWGG 2 cut(s) 295, 1307
TaaI ACNGT 2 cut(s) 955, 1377
TaiI ACGT 2 cut(s) 205, 923
TaqI TCGA 6 cut(s) 234, 429, 600, 1008, 1233, 1380
TasI AATT 2 cut(s) 38, 1208
TatI WGTACW 2 cut(s) 399, 718
TfiI GAWTC 3 cut(s) 4, 507, 1049
Tru1I TTAA 2 cut(s) 699, 830
Tru9I TTAA 2 cut(s) 699, 830
TscAI CASTG 1 cut(s) 292
TseFI GTSAC 4 cut(s) 211, 456, 856, 1147
TseI GCWGC 4 cut(s) 352, 635, 704, 911
Tsp45I GTSAC 4 cut(s) 211, 456, 856, 1147
TspDTI ATGAA 7 cut(s) 422, 482, 637, 749, 861, 1091, 1361
TspGWI ACGGA 1 cut(s) 1179
TspRI CASTG 1 cut(s) 292
Van91I CCANNNNNTGG 1 cut(s) 921
VpaK11BI GGWCC 3 cut(s) 1198, 1304, 1462
XapI RAATTY 2 cut(s) 38, 1208
XceI RCATGY 4 cut(s) 244, 725, 1041, 1094
XcmI CCANNNNNNNNNTGG 2 cut(s) 86, 1074
XmiI GTMKAC 2 cut(s) 483, 1395
XmnI GAANNNNTTC 1 cut(s) 119
XspI CTAG 2 cut(s) 461, 789
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.