MD09G1074200.v1.1

Regulator of chromosome condensation (RCC1) repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0011361
Physical Location & Seq
Reverse (-)
5155457 .. 5159707
4251 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1074200.v1.1.491

Sequence Viewer

Length: 1692 bp
ATGCGGGCCTCAACTACTGACCCGACCCGACTCCGCCTTCACCTCCCAGATTCTCGGAACACAACATGTAACTCTTTATATTTCACAGATGATCAACGGCAACCATTTTTCAGTTTCTCCCTTCTTTCTTCCTCTTCCACTTTGACTCCTCAGGTATCTCCACCACTCGCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTGCTTGGCTGCCGAGAAAATCCAACCAAACAGAGCACCCATTTTGACATTTATGAAAATGGACATTGATGAGCTTCTGGGTCGCAACCAGCCGGTCAGCATTCCGACGAAGAGTGCGATATACGTGTGGGGATATAACCAGTCCGGGCAGACGGGTCGGAACGGGAAGGAGCAGCAGCTGAGGATCCCGAAGCAGCTCTCGCCGGAGCTTTTTGGGTGTACGGCGGGGGCTAATTCGCGGTGGCTGGACATTACTTGCGGCCGCGAGCACACCGCCGCTGTTACCTCAGACGGGTCGCTTTTCACTTGGGGGGCTAATGATTTTGGTCAATTGGGAGATGGAACGGAGGAGCGAAGAAAAAATCCGAAGAAAGTGAAGCAATTACAGGCAGAGTTTGTGAAATCTGTGTCTTGTGGAGCACATTGTACCGCTGCCATTGCAGAACCTCGTGAAAATGATGGAACCGTCTCAACAAGAAGGCTTTGGGTGTGGGGGCAGAATCAGGGATCGAATCTTCCACGTTTGTTTTGGGGAGCCTTTACTCCAAACACGATTATCCGTCAAGTGTCTTGTGGGGCAGTTCATGCGATGGCTTTATCAGAGGATGGCTTGCTACAAGCTTGGGGATATAATGAATACGGTCAACTTGGCAGAGGATTTACATGTGAAGGATTACAGGGGGCTCGTATAATAAATGCATACGCGAAGTTCCTAGATGAAGCCCCTGAGCTTGTGAAGATTACCCAAGTGTCATGCGGGGAGTACCACACGGCAGCTATATCTGAAAAAGGCGAGGTGTATACTTGGGGGCTAGGAAACATGGGTCAACTTGGGCATTGTTCCCTTCAATCTGGGGAGAAAGAGTTATTGCCGAGGAGAGTGGTCGCACTTGATGGAATAGTCGTAAAGGACGTTGCATGCGGTGGCGTACATACATGTGCTGTGACTCAGAAGGGAGCTCTTTATGCTTGGGGTGGTGGTCGTGCAGGGCAGTTAGGCCTTGGCCCTGAAACGGGATTATTTTCATGCAACCCTAATGAATCTCAGTCATTTTTCCGGAATATTCCTGCGTTGGTTATTCCAACTAGTGTGCAACTCATTGCGTGTGGACACTCCCACACACTTATCTCTACAAGGGATGGAAGAATTCATGGATGGGGCTACAATAGCTATGGTCAAGCATCTAATGAGAAACTGACTTACGCTTGGTATCCATCTCCAGTTGATTGGTGCGTTGGGGAAGTGCGAAAACTTGCAGCTGGTGGTGGCCATTCAGCCGTGTTGACTGATGCATGTACCTTGAAGGAATTGTGTGAATTTAGGCTTGCAGATAGTGTTAATCTAAAGAATGCTTCTACGATTGAGGACATTGCGTCTAGAACAGGTTCAGATGCTTTAGCACGGCTTTGTGAAAGATTGAGGCAGCATGTGAATGAGAGTGGCGACTGTGAACACGAAGACGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04120 map04120
Pfam Domains
Protein Families
RCC1

Protein Analysis

564

Amino Acids

61.14

Weight (kDa)

6.51

Isoelectric Point (pI)

39.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_RLD PF25390 110 - 247 9.3e-28 RCC1-like domain
RCC1 PF00415 115 - 169 2.3e-07 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 158 - 185 2e-09 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 172 - 221 4.6e-15 Regulator of chromosome condensation (RCC1) repeat
WD40_RLD PF25390 235 - 502 5.5e-55 RCC1-like domain
RCC1_2 PF13540 261 - 290 7.1e-09 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 277 - 335 3.2e-07 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 322 - 351 8.1e-10 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 338 - 390 1.4e-13 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 377 - 406 1.4e-07 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 393 - 450 1.3e-08 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 440 - 468 1.3e-09 Regulator of chromosome condensation (RCC1) repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011361)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G02300 AT3G02300
fragaria_vesca FvH4_6g46400 FvH4_6g46400
malus_domestica MD09G1074200.v1.1 MD17G1065600.v1.1
prunus_persica Prupe.3G249200_v2.0.a1 Prupe.3G249200_v2.0.a1
pyrus_communis pycom09g00130 pycom17g06550
rosa_chinensis RchiOBHm_Chr2g0164931
rosa_laevigata RLG00000021498
rosa_multiflora Rmu_sc0001097.1_g000002
rosa_roxburghii Rroxscaffold_2G00086200
rosa_rugosa Rorug02G0511300
rosa_samantha Rh2AG579600 Rh2BG590600 Rh2CG561300 Rh2DG601000
rosa_wichuraiana Rw2G048110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1025
AccII CGCG 3 cut(s) 463, 489, 929
AccIII TCCGGA 1 cut(s) 1281
AclWI GGATC 3 cut(s) 403, 416, 739
AcoI YGGCCR 2 cut(s) 484, 1492
AcsI RAATTY 2 cut(s) 1371, 1541
AfaI GTAC 5 cut(s) 445, 652, 989, 1155, 1522
AfiI CCNNNNNNNGG 4 cut(s) 229, 516, 1237, 1238
AflIII ACRYGT 4 cut(s) 65, 348, 887, 1160
AgsI TTSAA 2 cut(s) 1073, 1528
AhdI GACNNNNNGTC 1 cut(s) 1597
AhlI ACTAGT 1 cut(s) 1310
Alw21I GWGCWC 4 cut(s) 262, 495, 646, 1186
Alw26I GTCTC 1 cut(s) 697
AlwI GGATC 3 cut(s) 403, 416, 739
AlwNI CAGNNNCTG 1 cut(s) 403
Aor13HI TCCGGA 1 cut(s) 1281
AoxI GGCC 5 cut(s) 6, 484, 1222, 1228, 1492
ApeKI GCWGC 8 cut(s) 233, 397, 400, 418, 656, 998, 1481, 1648
ApoI RAATTY 2 cut(s) 1371, 1541
Asp700I GAANNNNTTC 1 cut(s) 1609
AspS9I GGNCC 2 cut(s) 6, 1229
AsuC2I CCSGG 1 cut(s) 370
AsuHPI GGTGA 1 cut(s) 32
AxyI CCTNAGG 1 cut(s) 150
BalI TGGCCA 1 cut(s) 1494
BamHI GGATCC 1 cut(s) 408
BanII GRGCYC 2 cut(s) 910, 1186
BauI CACGAG 1 cut(s) 672
Bbv12I GWGCWC 4 cut(s) 262, 495, 646, 1186
BbvCI CCTCAGC 1 cut(s) 404
BbvI GCAGC 8 cut(s) 220, 409, 412, 430, 643, 1010, 1493, 1660
BccI CCATC 8 cut(s) 557, 677, 808, 824, 1112, 1358, 1374, 1447
BceAI ACGGC 5 cut(s) 113, 462, 1011, 1487, 1643
BcgI CGANNNNNNTGC 2 cut(s) 362, 396
BciVI GTATCC 1 cut(s) 1446
BclI TGATCA 1 cut(s) 91
BcnI CCSGG 1 cut(s) 370
BcoDI GTCTC 1 cut(s) 697
BcuI ACTAGT 1 cut(s) 1310
BfaI CTAG 4 cut(s) 938, 1037, 1311, 1602
BfuI GTATCC 1 cut(s) 1446
Bme1390I CCNGG 1 cut(s) 370
BmeRI GACNNNNNGTC 1 cut(s) 1597
BmgT120I GGNCC 2 cut(s) 6, 1229
BmiI GGNNCC 3 cut(s) 410, 688, 760
BmrFI CCNGG 1 cut(s) 370
BmsI GCATC 3 cut(s) 1415, 1504, 1606
BpmI CTGGAG 1 cut(s) 1428
Bpu10I CCTNAGC 2 cut(s) 404, 951
BpuMI CCSGG 1 cut(s) 370
BsaAI YACGTR 1 cut(s) 349
BsaJI CCNNGG 2 cut(s) 1097, 1225
BsaWI WCCGGW 1 cut(s) 1281
BsaXI ACNNNNNCTCC 4 cut(s) 130, 160, 1073, 1103
Bsc4I CCNNNNNNNGG 4 cut(s) 229, 516, 1237, 1238
Bse118I RCCGGY 1 cut(s) 316
Bse1I ACTGG 2 cut(s) 364, 1445
Bse21I CCTNAGG 1 cut(s) 150
Bse3DI GCAATG 3 cut(s) 660, 1323, 1593
BseAI TCCGGA 1 cut(s) 1281
BseDI CCNNGG 2 cut(s) 1097, 1225
BseGI GGATG 3 cut(s) 835, 1369, 1385
BseLI CCNNNNNNNGG 4 cut(s) 229, 516, 1237, 1238
BseMI GCAATG 3 cut(s) 660, 1323, 1593
BseMII CTCAG 6 cut(s) 164, 395, 525, 942, 1187, 1283
BseNI ACTGG 2 cut(s) 364, 1445
BseRI GAGGAG 4 cut(s) 138, 212, 587, 1114
BseX3I CGGCCG 1 cut(s) 484
BseXI GCAGC 8 cut(s) 220, 409, 412, 430, 643, 1010, 1493, 1660
BsgI GTGCAG 1 cut(s) 1230
Bsh1236I CGCG 3 cut(s) 463, 489, 929
Bsh1285I CGRYCG 1 cut(s) 487
BshFI GGCC 5 cut(s) 8, 486, 1224, 1230, 1494
BsiEI CGRYCG 1 cut(s) 487
BsiHKAI GWGCWC 4 cut(s) 262, 495, 646, 1186
BsiSI CCGG 4 cut(s) 317, 369, 428, 1282
BslI CCNNNNNNNGG 4 cut(s) 229, 516, 1237, 1238
BsmAI GTCTC 1 cut(s) 697
BsmBI CGTCTC 1 cut(s) 697
BsmI GAATGC 2 cut(s) 324, 1579
BsnI GGCC 5 cut(s) 8, 486, 1224, 1230, 1494
Bsp1286I GDGCHC 5 cut(s) 262, 495, 646, 910, 1186
Bsp13I TCCGGA 1 cut(s) 1281
Bsp143I GATC 3 cut(s) 91, 408, 731
BspANI GGCC 5 cut(s) 8, 486, 1224, 1230, 1494
BspCNI CTCAG 6 cut(s) 163, 396, 524, 943, 1186, 1282
BspEI TCCGGA 1 cut(s) 1281
BspFNI CGCG 3 cut(s) 463, 489, 929
BspLI GGNNCC 3 cut(s) 410, 688, 760
BspPI GGATC 3 cut(s) 403, 416, 739
BsrDI GCAATG 3 cut(s) 660, 1323, 1593
BsrFI RCCGGY 1 cut(s) 316
BsrI ACTGG 2 cut(s) 364, 1445
BssAI RCCGGY 1 cut(s) 316
BssECI CCNNGG 2 cut(s) 1097, 1225
BssMI GATC 3 cut(s) 91, 408, 731
BssNAI GTATAC 1 cut(s) 1026
BssSI CACGAG 1 cut(s) 672
BssT1I CCWWGG 1 cut(s) 1225
Bst1107I GTATAC 1 cut(s) 1026
Bst2BI CACGAG 1 cut(s) 672
Bst4CI ACNGT 3 cut(s) 691, 866, 1673
Bst6I CTCTTC 2 cut(s) 139, 329
BstAPI GCANNNNNTGC 1 cut(s) 809
BstBAI YACGTR 1 cut(s) 349
BstC8I GCNNGC 5 cut(s) 6, 491, 836, 1144, 1551
BstDEI CTNAG 6 cut(s) 150, 404, 511, 951, 1173, 1269
BstF5I GGATG 3 cut(s) 835, 1369, 1385
BstFNI CGCG 3 cut(s) 463, 489, 929
BstKTI GATC 3 cut(s) 94, 411, 734
BstMAI GTCTC 1 cut(s) 697
BstMBI GATC 3 cut(s) 91, 408, 731
BstMCI CGRYCG 1 cut(s) 487
BstMWI GCNNNNNNNGC 5 cut(s) 424, 662, 809, 1190, 1392
BstNSI RCATGY 6 cut(s) 69, 891, 1146, 1164, 1521, 1655
BstSCI CCNGG 1 cut(s) 368
BstUI CGCG 3 cut(s) 463, 489, 929
BstV1I GCAGC 8 cut(s) 220, 409, 412, 430, 643, 1010, 1493, 1660
BstX2I RGATCY 1 cut(s) 408
BstXI CCANNNNNNTGG 1 cut(s) 1452
BstYI RGATCY 1 cut(s) 408
BstZ17I GTATAC 1 cut(s) 1026
BstZI CGGCCG 1 cut(s) 484
Bsu36I CCTNAGG 1 cut(s) 150
BsuI GTATCC 1 cut(s) 1446
BsuRI GGCC 5 cut(s) 8, 486, 1224, 1230, 1494
BtgZI GCGATG 1 cut(s) 827
BtsCI GGATG 3 cut(s) 835, 1369, 1385
Cac8I GCNNGC 5 cut(s) 6, 491, 836, 1144, 1551
CaiI CAGNNNCTG 1 cut(s) 403
CciNI GCGGCCGC 1 cut(s) 484
Cfr10I RCCGGY 1 cut(s) 316
Cfr13I GGNCC 2 cut(s) 6, 1229
CseI GACGC 1 cut(s) 1587
Csp6I GTAC 5 cut(s) 444, 651, 988, 1154, 1521
CviQI GTAC 5 cut(s) 444, 651, 988, 1154, 1521
DdeI CTNAG 6 cut(s) 150, 404, 511, 951, 1173, 1269
DpnI GATC 3 cut(s) 93, 410, 733
DpnII GATC 3 cut(s) 91, 408, 731
DriI GACNNNNNGTC 1 cut(s) 1597
EaeI YGGCCR 2 cut(s) 484, 1492
EagI CGGCCG 1 cut(s) 484
Eam1104I CTCTTC 2 cut(s) 139, 329
Eam1105I GACNNNNNGTC 1 cut(s) 1597
EarI CTCTTC 2 cut(s) 139, 329
EciI GGCGGA 1 cut(s) 23
Ecl136II GAGCTC 1 cut(s) 1184
EclXI CGGCCG 1 cut(s) 484
Eco130I CCWWGG 1 cut(s) 1225
Eco147I AGGCCT 1 cut(s) 1224
Eco24I GRGCYC 2 cut(s) 910, 1186
Eco52I CGGCCG 1 cut(s) 484
Eco53kI GAGCTC 1 cut(s) 1184
Eco81I CCTNAGG 1 cut(s) 150
EcoICRI GAGCTC 1 cut(s) 1184
EcoRI GAATTC 1 cut(s) 1371
EcoT14I CCWWGG 1 cut(s) 1225
EcoT22I ATGCAT 2 cut(s) 925, 1519
EcoT38I GRGCYC 2 cut(s) 910, 1186
ErhI CCWWGG 1 cut(s) 1225
Esp3I CGTCTC 1 cut(s) 697
FauI CCCGC 2 cut(s) 442, 974
FbaI TGATCA 1 cut(s) 91
FblI GTMKAC 1 cut(s) 1025
FokI GGATG 3 cut(s) 842, 1376, 1392
FriOI GRGCYC 2 cut(s) 910, 1186
FspBI CTAG 4 cut(s) 938, 1037, 1311, 1602
GsuI CTGGAG 1 cut(s) 1428
HaeIII GGCC 5 cut(s) 8, 486, 1224, 1230, 1494
HapII CCGG 4 cut(s) 317, 369, 428, 1282
HgaI GACGC 1 cut(s) 1587
HincII GTYRAC 3 cut(s) 869, 1052, 1509
HindII GTYRAC 3 cut(s) 869, 1052, 1509
HindIII AAGCTT 1 cut(s) 843
HinfI GANTC 7 cut(s) 30, 50, 145, 724, 736, 1171, 1265
HpaII CCGG 4 cut(s) 317, 369, 428, 1282
HphI GGTGA 1 cut(s) 32
Hpy166II GTNNAC 7 cut(s) 444, 869, 1026, 1052, 1334, 1509, 1676
Hpy188I TCNGA 9 cut(s) 57, 330, 384, 514, 591, 826, 1009, 1176, 1615
Hpy188III TCNNGA 4 cut(s) 412, 674, 1282, 1602
Hpy8I GTNNAC 7 cut(s) 444, 869, 1026, 1052, 1334, 1509, 1676
Hpy99I CGWCG 1 cut(s) 334
HpyAV CCTTC 8 cut(s) 47, 131, 385, 696, 887, 1079, 1171, 1522
HpyCH4III ACNGT 3 cut(s) 691, 866, 1673
HpyCH4IV ACGT 3 cut(s) 348, 745, 1137
HpyCH4V TGCA 9 cut(s) 665, 923, 1142, 1211, 1254, 1318, 1481, 1517, 1553
HpyF10VI GCNNNNNNNGC 5 cut(s) 424, 662, 809, 1190, 1392
HpyF3I CTNAG 6 cut(s) 150, 404, 511, 951, 1173, 1269
HpySE526I ACGT 3 cut(s) 348, 745, 1137
Kpn2I TCCGGA 1 cut(s) 1281
Ksp22I TGATCA 1 cut(s) 91
Kzo9I GATC 3 cut(s) 91, 408, 731
LmnI GCTCC 6 cut(s) 394, 430, 574, 641, 758, 1181
Lsp1109I GCAGC 8 cut(s) 220, 409, 412, 430, 643, 1010, 1493, 1660
LweI GCATC 3 cut(s) 1415, 1504, 1606
MaeI CTAG 4 cut(s) 938, 1037, 1311, 1602
MaeII ACGT 3 cut(s) 348, 745, 1137
MaeIII GTNAC 3 cut(s) 68, 505, 1168
MalI GATC 3 cut(s) 93, 410, 733
MboI GATC 3 cut(s) 91, 408, 731
MboII GAAGA 8 cut(s) 120, 126, 346, 591, 604, 731, 973, 1380
MfeI CAATTG 1 cut(s) 554
MflI RGATCY 1 cut(s) 408
MhlI GDGCHC 5 cut(s) 262, 495, 646, 910, 1186
MlsI TGGCCA 1 cut(s) 1494
MluCI AATT 6 cut(s) 457, 554, 605, 1371, 1532, 1541
MluNI TGGCCA 1 cut(s) 1494
MlyI GAGTC 3 cut(s) 24, 139, 1165
MmeI TCCRAC 4 cut(s) 271, 353, 362, 1331
Mox20I TGGCCA 1 cut(s) 1494
Mph1103I ATGCAT 2 cut(s) 925, 1519
MroI TCCGGA 1 cut(s) 1281
MroXI GAANNNNTTC 1 cut(s) 1609
MscI TGGCCA 1 cut(s) 1494
MseI TTAA 1 cut(s) 1563
MslI CAYNNNNRTG 2 cut(s) 1161, 1656
Msp20I TGGCCA 1 cut(s) 1494
MspA1I CMGCKG 4 cut(s) 403, 503, 656, 1484
MspI CCGG 4 cut(s) 317, 369, 428, 1282
MspR9I CCNGG 1 cut(s) 370
MunI CAATTG 1 cut(s) 554
Mva1269I GAATGC 2 cut(s) 324, 1579
MvnI CGCG 3 cut(s) 463, 489, 929
MwoI GCNNNNNNNGC 5 cut(s) 424, 662, 809, 1190, 1392
NciI CCSGG 1 cut(s) 370
NdeII GATC 3 cut(s) 91, 408, 731
NlaIV GGNNCC 3 cut(s) 410, 688, 760
NmeAIII GCCGAG 2 cut(s) 262, 1122
NmuCI GTSAC 1 cut(s) 1168
NotI GCGGCCGC 1 cut(s) 484
NsiI ATGCAT 2 cut(s) 925, 1519
NspI RCATGY 6 cut(s) 69, 891, 1146, 1164, 1521, 1655
PaeI GCATGC 1 cut(s) 1146
PceI AGGCCT 1 cut(s) 1224
PciI ACATGT 3 cut(s) 65, 887, 1160
PcsI WCGNNNNNNNCGW 2 cut(s) 338, 1134
PctI GAATGC 2 cut(s) 324, 1579
PdmI GAANNNNTTC 1 cut(s) 1609
PfeI GAWTC 4 cut(s) 50, 724, 736, 1265
PleI GAGTC 3 cut(s) 24, 139, 1165
PpsI GAGTC 3 cut(s) 24, 139, 1165
Ppu21I YACGTR 1 cut(s) 349
PscI ACATGT 3 cut(s) 65, 887, 1160
Psp124BI GAGCTC 1 cut(s) 1186
PspN4I GGNNCC 3 cut(s) 410, 688, 760
PspPI GGNCC 2 cut(s) 6, 1229
PstNI CAGNNNCTG 1 cut(s) 403
PsuI RGATCY 1 cut(s) 408
PvuII CAGCTG 2 cut(s) 403, 1484
RsaI GTAC 5 cut(s) 445, 652, 989, 1155, 1522
RsaNI GTAC 5 cut(s) 444, 651, 988, 1154, 1521
RseI CAYNNNNRTG 2 cut(s) 1161, 1656
SacI GAGCTC 1 cut(s) 1186
SaqAI TTAA 1 cut(s) 1563
Sau3AI GATC 3 cut(s) 91, 408, 731
Sau96I GGNCC 2 cut(s) 6, 1229
SchI GAGTC 3 cut(s) 24, 139, 1165
ScrFI CCNGG 1 cut(s) 370
SduI GDGCHC 5 cut(s) 262, 495, 646, 910, 1186
SfaNI GCATC 3 cut(s) 1415, 1504, 1606
SmiMI CAYNNNNRTG 2 cut(s) 1161, 1656
SpeI ACTAGT 1 cut(s) 1310
SphI GCATGC 1 cut(s) 1146
Sse9I AATT 6 cut(s) 457, 554, 605, 1371, 1532, 1541
SseBI AGGCCT 1 cut(s) 1224
SspI AATATT 1 cut(s) 1288
SspMI CTAG 4 cut(s) 938, 1037, 1311, 1602
SstI GAGCTC 1 cut(s) 1186
StuI AGGCCT 1 cut(s) 1224
StyD4I CCNGG 1 cut(s) 368
StyI CCWWGG 1 cut(s) 1225
TaaI ACNGT 3 cut(s) 691, 866, 1673
TaiI ACGT 3 cut(s) 351, 748, 1140
TaqI TCGA 1 cut(s) 734
TasI AATT 6 cut(s) 457, 554, 605, 1371, 1532, 1541
TauI GCSGC 3 cut(s) 486, 489, 503
TfiI GAWTC 4 cut(s) 50, 724, 736, 1265
Tru1I TTAA 1 cut(s) 1563
Tru9I TTAA 1 cut(s) 1563
TseFI GTSAC 1 cut(s) 1168
TseI GCWGC 8 cut(s) 233, 397, 400, 418, 656, 998, 1481, 1648
Tsp45I GTSAC 1 cut(s) 1168
TspDTI ATGAA 7 cut(s) 293, 797, 873, 957, 1239, 1278, 1364
TspGWI ACGGA 2 cut(s) 584, 773
XapI RAATTY 2 cut(s) 1371, 1541
XbaI TCTAGA 1 cut(s) 1601
XceI RCATGY 6 cut(s) 69, 891, 1146, 1164, 1521, 1655
XcmI CCANNNNNNNNNTGG 1 cut(s) 750
XmiI GTMKAC 1 cut(s) 1025
XmnI GAANNNNTTC 1 cut(s) 1609
XspI CTAG 4 cut(s) 938, 1037, 1311, 1602
Zsp2I ATGCAT 2 cut(s) 925, 1519
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.